Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP02_F_O17
(655 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U42833-4|AAA83579.1| 319|Caenorhabditis elegans Hypothetical pr... 133 9e-32
AL032655-9|CAA21725.3| 339|Caenorhabditis elegans Hypothetical ... 60 2e-09
AL032655-8|CAH60799.1| 348|Caenorhabditis elegans Hypothetical ... 60 2e-09
Z71259-13|CAN86622.2| 282|Caenorhabditis elegans Hypothetical p... 32 0.41
Z71259-12|CAA95791.3| 285|Caenorhabditis elegans Hypothetical p... 32 0.41
AB303039-1|BAF62083.1| 282|Caenorhabditis elegans inositol-1(or... 32 0.41
AB303038-1|BAF62082.1| 285|Caenorhabditis elegans inositol-1(or... 32 0.41
AF548287-1|AAN40683.1| 2238|Caenorhabditis elegans poly ADP-ribo... 30 1.2
AF047664-2|AAC04454.2| 2276|Caenorhabditis elegans Poly(adp-ribo... 30 1.2
AF047664-1|AAO12392.1| 2238|Caenorhabditis elegans Poly(adp-ribo... 30 1.2
AF067940-4|AAC19201.1| 487|Caenorhabditis elegans Hypothetical ... 28 5.0
U80955-9|AAN65296.1| 863|Caenorhabditis elegans Hypothetical pr... 28 6.7
U80955-8|AAN65295.1| 881|Caenorhabditis elegans Hypothetical pr... 28 6.7
AF251308-1|AAF82360.1| 1413|Caenorhabditis elegans guanine nucle... 27 8.8
AC006692-9|AAF39972.5| 1493|Caenorhabditis elegans Drosophila so... 27 8.8
>U42833-4|AAA83579.1| 319|Caenorhabditis elegans Hypothetical
protein ZK430.2 protein.
Length = 319
Score = 133 bits (322), Expect = 9e-32
Identities = 79/195 (40%), Positives = 106/195 (54%), Gaps = 11/195 (5%)
Frame = +3
Query: 99 MYGSVPLIVRLLASSVSVANRAGKIVRDVMSKGELGIVEKGKD----DYQTEADRSAQRC 266
M+ + RL+ASSV V+ AG ++++VM+ G+L I++K + D QTEADR AQ C
Sbjct: 1 MFNKASFLTRLVASSVRVSEAAGGLIKNVMAGGDLKIIDKSEHGSGYDPQTEADRRAQYC 60
Query: 267 IVASLAAQYPNLKIIXXXXXXXXXXXXXXXWLVNEIXKEILKLQCPPNLQEVNEEDIVXW 446
IV SL + N+ II + + + E L L+ + E D+V W
Sbjct: 61 IVQSLQKHFKNINIIGEEEDTTACPEIEMGFSADVLQMERLM---STELKNIQENDVVVW 117
Query: 447 VDPLDGTSEYT-------QGFLEHVTVLIGIAVNETPVAGVIHQPYYKNIVEGDKKIGRT 605
VDPLDGTSE LE VTVLIGIA PVAG+IHQPY+ +K+GRT
Sbjct: 118 VDPLDGTSEVALAVKNKNMALLEQVTVLIGIAYKGRPVAGIIHQPYH-------EKLGRT 170
Query: 606 IWGLHGVGVXGFTPA 650
+W + G GV G PA
Sbjct: 171 VWAIQGCGVHGVVPA 185
>AL032655-9|CAA21725.3| 339|Caenorhabditis elegans Hypothetical
protein Y6B3B.5a protein.
Length = 339
Score = 59.7 bits (138), Expect = 2e-09
Identities = 31/134 (23%), Positives = 68/134 (50%), Gaps = 2/134 (1%)
Frame = +3
Query: 204 GIVEKGKDDYQTEADRSAQRCIVASLAAQYPNLKIIXXXXXXXXXXXXXXXWLVNE--IX 377
G+ ++GK++ T AD + I+ + ++P L+I+ + ++ +
Sbjct: 74 GLTDEGKEELLTRADLISNHLIL-DILQRFPQLQIVSEEKKSEFSEREIEPYRLDNYAVW 132
Query: 378 KEILKLQCPPNLQEVNEEDIVXWVDPLDGTSEYTQGFLEHVTVLIGIAVNETPVAGVIHQ 557
+ + ++ + + D+ +VDPLD T E+T+G E+VTV+ I ++ P+ G I++
Sbjct: 133 QSVKEILDKIPSRRLQLSDVRVFVDPLDATQEFTEGLTEYVTVMACIVLDAEPIFGAIYR 192
Query: 558 PYYKNIVEGDKKIG 599
P++ + G + G
Sbjct: 193 PFFNETIFGLQGFG 206
>AL032655-8|CAH60799.1| 348|Caenorhabditis elegans Hypothetical
protein Y6B3B.5b protein.
Length = 348
Score = 59.7 bits (138), Expect = 2e-09
Identities = 31/134 (23%), Positives = 68/134 (50%), Gaps = 2/134 (1%)
Frame = +3
Query: 204 GIVEKGKDDYQTEADRSAQRCIVASLAAQYPNLKIIXXXXXXXXXXXXXXXWLVNE--IX 377
G+ ++GK++ T AD + I+ + ++P L+I+ + ++ +
Sbjct: 83 GLTDEGKEELLTRADLISNHLIL-DILQRFPQLQIVSEEKKSEFSEREIEPYRLDNYAVW 141
Query: 378 KEILKLQCPPNLQEVNEEDIVXWVDPLDGTSEYTQGFLEHVTVLIGIAVNETPVAGVIHQ 557
+ + ++ + + D+ +VDPLD T E+T+G E+VTV+ I ++ P+ G I++
Sbjct: 142 QSVKEILDKIPSRRLQLSDVRVFVDPLDATQEFTEGLTEYVTVMACIVLDAEPIFGAIYR 201
Query: 558 PYYKNIVEGDKKIG 599
P++ + G + G
Sbjct: 202 PFFNETIFGLQGFG 215
>Z71259-13|CAN86622.2| 282|Caenorhabditis elegans Hypothetical
protein F13G3.5b protein.
Length = 282
Score = 31.9 bits (69), Expect = 0.41
Identities = 12/44 (27%), Positives = 26/44 (59%), Gaps = 1/44 (2%)
Frame = +3
Query: 432 DIVXWV-DPLDGTSEYTQGFLEHVTVLIGIAVNETPVAGVIHQP 560
D W+ DP+DGT+ + + + + +G+A+ + AG+++ P
Sbjct: 89 DAPTWIIDPIDGTTNFVHR-IPMIAICVGLAIKKQIRAGIVYNP 131
>Z71259-12|CAA95791.3| 285|Caenorhabditis elegans Hypothetical
protein F13G3.5a protein.
Length = 285
Score = 31.9 bits (69), Expect = 0.41
Identities = 12/44 (27%), Positives = 26/44 (59%), Gaps = 1/44 (2%)
Frame = +3
Query: 432 DIVXWV-DPLDGTSEYTQGFLEHVTVLIGIAVNETPVAGVIHQP 560
D W+ DP+DGT+ + + + + +G+A+ + AG+++ P
Sbjct: 89 DAPTWIIDPIDGTTNFVHR-IPMIAICVGLAIKKQIRAGIVYNP 131
>AB303039-1|BAF62083.1| 282|Caenorhabditis elegans inositol-1(or
4)-monophosphatase protein.
Length = 282
Score = 31.9 bits (69), Expect = 0.41
Identities = 12/44 (27%), Positives = 26/44 (59%), Gaps = 1/44 (2%)
Frame = +3
Query: 432 DIVXWV-DPLDGTSEYTQGFLEHVTVLIGIAVNETPVAGVIHQP 560
D W+ DP+DGT+ + + + + +G+A+ + AG+++ P
Sbjct: 89 DAPTWIIDPIDGTTNFVHR-IPMIAICVGLAIKKQIRAGIVYNP 131
>AB303038-1|BAF62082.1| 285|Caenorhabditis elegans inositol-1(or
4)-monophosphatase protein.
Length = 285
Score = 31.9 bits (69), Expect = 0.41
Identities = 12/44 (27%), Positives = 26/44 (59%), Gaps = 1/44 (2%)
Frame = +3
Query: 432 DIVXWV-DPLDGTSEYTQGFLEHVTVLIGIAVNETPVAGVIHQP 560
D W+ DP+DGT+ + + + + +G+A+ + AG+++ P
Sbjct: 89 DAPTWIIDPIDGTTNFVHR-IPMIAICVGLAIKKQIRAGIVYNP 131
>AF548287-1|AAN40683.1| 2238|Caenorhabditis elegans poly ADP-ribose
metabolism enzyme-5 protein.
Length = 2238
Score = 30.3 bits (65), Expect = 1.2
Identities = 19/51 (37%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
Frame = +3
Query: 105 GSVPLIVRLLASSVSVANRAGKIVRDVMSKGELGIVEKGKDDYQT-EADRS 254
GSV ++ + + + VA RAG+ V E+ +EKG D T ADRS
Sbjct: 403 GSVTMLTKQTETPLHVAARAGRAVNCTFLMKEMLDLEKGDDGESTIRADRS 453
>AF047664-2|AAC04454.2| 2276|Caenorhabditis elegans Poly(adp-ribose)
metabolism enzymeprotein 5, isoform a protein.
Length = 2276
Score = 30.3 bits (65), Expect = 1.2
Identities = 19/51 (37%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
Frame = +3
Query: 105 GSVPLIVRLLASSVSVANRAGKIVRDVMSKGELGIVEKGKDDYQT-EADRS 254
GSV ++ + + + VA RAG+ V E+ +EKG D T ADRS
Sbjct: 403 GSVTMLTKQTETPLHVAARAGRAVNCTFLMKEMLDLEKGDDGESTIRADRS 453
>AF047664-1|AAO12392.1| 2238|Caenorhabditis elegans Poly(adp-ribose)
metabolism enzymeprotein 5, isoform b protein.
Length = 2238
Score = 30.3 bits (65), Expect = 1.2
Identities = 19/51 (37%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
Frame = +3
Query: 105 GSVPLIVRLLASSVSVANRAGKIVRDVMSKGELGIVEKGKDDYQT-EADRS 254
GSV ++ + + + VA RAG+ V E+ +EKG D T ADRS
Sbjct: 403 GSVTMLTKQTETPLHVAARAGRAVNCTFLMKEMLDLEKGDDGESTIRADRS 453
>AF067940-4|AAC19201.1| 487|Caenorhabditis elegans Hypothetical
protein F36F12.2 protein.
Length = 487
Score = 28.3 bits (60), Expect = 5.0
Identities = 13/30 (43%), Positives = 17/30 (56%)
Frame = -2
Query: 606 LSYRFSCHLQLYFYSMVDG*HQQLVSHSQL 517
+S R+ HLQLY SMV+ L H +L
Sbjct: 146 VSKRYGAHLQLYVVSMVESYFNLLKEHEKL 175
>U80955-9|AAN65296.1| 863|Caenorhabditis elegans Hypothetical
protein T04C9.1b protein.
Length = 863
Score = 27.9 bits (59), Expect = 6.7
Identities = 10/27 (37%), Positives = 18/27 (66%), Gaps = 2/27 (7%)
Frame = +3
Query: 411 LQEVNEEDIVXWVDPLDGTSE--YTQG 485
+Q ++E+D+ W+D +DG + YT G
Sbjct: 366 MQALSEKDLCEWIDAMDGAKQNSYTAG 392
>U80955-8|AAN65295.1| 881|Caenorhabditis elegans Hypothetical
protein T04C9.1a protein.
Length = 881
Score = 27.9 bits (59), Expect = 6.7
Identities = 10/27 (37%), Positives = 18/27 (66%), Gaps = 2/27 (7%)
Frame = +3
Query: 411 LQEVNEEDIVXWVDPLDGTSE--YTQG 485
+Q ++E+D+ W+D +DG + YT G
Sbjct: 366 MQALSEKDLCEWIDAMDGAKQNSYTAG 392
>AF251308-1|AAF82360.1| 1413|Caenorhabditis elegans guanine
nucleotide exchange factorfor RAS protein.
Length = 1413
Score = 27.5 bits (58), Expect = 8.8
Identities = 17/55 (30%), Positives = 26/55 (47%)
Frame = +3
Query: 396 QCPPNLQEVNEEDIVXWVDPLDGTSEYTQGFLEHVTVLIGIAVNETPVAGVIHQP 560
QC P L + E + DP +G S+ + F + + LI V P G++ QP
Sbjct: 782 QCDPVLLDALELFLNRCCDPREGLSKQHKKFCKTILALIEKRVKNPP--GIMQQP 834
>AC006692-9|AAF39972.5| 1493|Caenorhabditis elegans Drosophila sos
homolog protein 1 protein.
Length = 1493
Score = 27.5 bits (58), Expect = 8.8
Identities = 17/55 (30%), Positives = 26/55 (47%)
Frame = +3
Query: 396 QCPPNLQEVNEEDIVXWVDPLDGTSEYTQGFLEHVTVLIGIAVNETPVAGVIHQP 560
QC P L + E + DP +G S+ + F + + LI V P G++ QP
Sbjct: 782 QCDPVLLDALELFLNRCCDPREGLSKQHKKFCKTILALIEKRVKNPP--GIMQQP 834
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,440,473
Number of Sequences: 27780
Number of extensions: 256895
Number of successful extensions: 635
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 612
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 631
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1455289764
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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