Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP02_F_O15
(480 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY070991-1|AAL48613.1| 148|Drosophila melanogaster RE08270p pro... 123 1e-28
AE013599-2306|AAM68504.1| 147|Drosophila melanogaster CG8332-PB... 123 1e-28
AE013599-2305|AAF57984.1| 148|Drosophila melanogaster CG8332-PA... 123 1e-28
AY119656-1|AAM50310.1| 460|Drosophila melanogaster SD02418p pro... 28 7.6
AJ010073-1|CAB45234.1| 614|Drosophila melanogaster XRCC1 protei... 28 7.6
AF132142-1|AAD33589.1| 614|Drosophila melanogaster DNA repair p... 28 7.6
AE014298-727|AAF46025.1| 614|Drosophila melanogaster CG4208-PA ... 28 7.6
AE014296-1211|AAF50597.1| 460|Drosophila melanogaster CG8616-PA... 28 7.6
>AY070991-1|AAL48613.1| 148|Drosophila melanogaster RE08270p
protein.
Length = 148
Score = 123 bits (297), Expect = 1e-28
Identities = 61/85 (71%), Positives = 66/85 (77%)
Frame = +1
Query: 61 RKSVFSGSSLTGAVDLDQLLDMPNEQLMELMHXXXXXXXXXGLKRKPMALVKKLRRAKKE 240
+K F + G VDLDQLLDMPN QL+ELMH GLKRKPMAL+KKLR+AKKE
Sbjct: 11 KKRTFKKFTYRG-VDLDQLLDMPNNQLVELMHSRARRRFSRGLKRKPMALIKKLRKAKKE 69
Query: 241 APPNEKPEIVKTHLRNMIIVPEMVG 315
APPNEKPEIVKTHLRNMIIVPEM G
Sbjct: 70 APPNEKPEIVKTHLRNMIIVPEMTG 94
Score = 114 bits (274), Expect = 7e-26
Identities = 48/59 (81%), Positives = 54/59 (91%)
Frame = +2
Query: 302 PRWSGSIVGIYNGKTFNQVEIKPEMIGHYLGEFSVTYKPVKHGXPGIGATHSSRFIPLK 478
P +GSI+G+YNGK F QVE+KPEMIGHYLGEF++TYKPVKHG PGIGATHSSRFIPLK
Sbjct: 90 PEMTGSIIGVYNGKDFGQVEVKPEMIGHYLGEFALTYKPVKHGRPGIGATHSSRFIPLK 148
Score = 37.1 bits (82), Expect = 0.012
Identities = 15/19 (78%), Positives = 17/19 (89%)
Frame = +3
Query: 42 EVDETLKKKRIFRKFTYRG 98
+VDE LKKKR F+KFTYRG
Sbjct: 4 QVDENLKKKRTFKKFTYRG 22
>AE013599-2306|AAM68504.1| 147|Drosophila melanogaster CG8332-PB,
isoform B protein.
Length = 147
Score = 123 bits (297), Expect = 1e-28
Identities = 61/85 (71%), Positives = 66/85 (77%)
Frame = +1
Query: 61 RKSVFSGSSLTGAVDLDQLLDMPNEQLMELMHXXXXXXXXXGLKRKPMALVKKLRRAKKE 240
+K F + G VDLDQLLDMPN QL+ELMH GLKRKPMAL+KKLR+AKKE
Sbjct: 10 KKRTFKKFTYRG-VDLDQLLDMPNNQLVELMHSRARRRFSRGLKRKPMALIKKLRKAKKE 68
Query: 241 APPNEKPEIVKTHLRNMIIVPEMVG 315
APPNEKPEIVKTHLRNMIIVPEM G
Sbjct: 69 APPNEKPEIVKTHLRNMIIVPEMTG 93
Score = 114 bits (274), Expect = 7e-26
Identities = 48/59 (81%), Positives = 54/59 (91%)
Frame = +2
Query: 302 PRWSGSIVGIYNGKTFNQVEIKPEMIGHYLGEFSVTYKPVKHGXPGIGATHSSRFIPLK 478
P +GSI+G+YNGK F QVE+KPEMIGHYLGEF++TYKPVKHG PGIGATHSSRFIPLK
Sbjct: 89 PEMTGSIIGVYNGKDFGQVEVKPEMIGHYLGEFALTYKPVKHGRPGIGATHSSRFIPLK 147
Score = 38.7 bits (86), Expect = 0.004
Identities = 16/21 (76%), Positives = 18/21 (85%)
Frame = +3
Query: 36 MAEVDETLKKKRIFRKFTYRG 98
M +VDE LKKKR F+KFTYRG
Sbjct: 1 MQQVDENLKKKRTFKKFTYRG 21
>AE013599-2305|AAF57984.1| 148|Drosophila melanogaster CG8332-PA,
isoform A protein.
Length = 148
Score = 123 bits (297), Expect = 1e-28
Identities = 61/85 (71%), Positives = 66/85 (77%)
Frame = +1
Query: 61 RKSVFSGSSLTGAVDLDQLLDMPNEQLMELMHXXXXXXXXXGLKRKPMALVKKLRRAKKE 240
+K F + G VDLDQLLDMPN QL+ELMH GLKRKPMAL+KKLR+AKKE
Sbjct: 11 KKRTFKKFTYRG-VDLDQLLDMPNNQLVELMHSRARRRFSRGLKRKPMALIKKLRKAKKE 69
Query: 241 APPNEKPEIVKTHLRNMIIVPEMVG 315
APPNEKPEIVKTHLRNMIIVPEM G
Sbjct: 70 APPNEKPEIVKTHLRNMIIVPEMTG 94
Score = 114 bits (274), Expect = 7e-26
Identities = 48/59 (81%), Positives = 54/59 (91%)
Frame = +2
Query: 302 PRWSGSIVGIYNGKTFNQVEIKPEMIGHYLGEFSVTYKPVKHGXPGIGATHSSRFIPLK 478
P +GSI+G+YNGK F QVE+KPEMIGHYLGEF++TYKPVKHG PGIGATHSSRFIPLK
Sbjct: 90 PEMTGSIIGVYNGKDFGQVEVKPEMIGHYLGEFALTYKPVKHGRPGIGATHSSRFIPLK 148
Score = 37.1 bits (82), Expect = 0.012
Identities = 15/19 (78%), Positives = 17/19 (89%)
Frame = +3
Query: 42 EVDETLKKKRIFRKFTYRG 98
+VDE LKKKR F+KFTYRG
Sbjct: 4 QVDENLKKKRTFKKFTYRG 22
>AY119656-1|AAM50310.1| 460|Drosophila melanogaster SD02418p
protein.
Length = 460
Score = 27.9 bits (59), Expect = 7.6
Identities = 14/49 (28%), Positives = 24/49 (48%), Gaps = 1/49 (2%)
Frame = -1
Query: 306 LGNDDHV-SQVSLHDLWLLIRRSLFLGATQLLDQCHWFTFKTTSEPPAR 163
L ++H+ +Q+ H WLL+ S FL W +++ PPA+
Sbjct: 201 LTGEEHIFAQLHSHFSWLLLAGSRFLTEHVTFGNLPWLPPQSSGRPPAQ 249
>AJ010073-1|CAB45234.1| 614|Drosophila melanogaster XRCC1 protein
protein.
Length = 614
Score = 27.9 bits (59), Expect = 7.6
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = +3
Query: 213 QEAASRQERGSSE*EARDREDSLEKHDHRSRD 308
+E ++ER S+ E + R KHDHRS D
Sbjct: 349 KEQLRKEERSHSK-EEKSRRKEKSKHDHRSSD 379
>AF132142-1|AAD33589.1| 614|Drosophila melanogaster DNA repair
protein XRCC1 protein.
Length = 614
Score = 27.9 bits (59), Expect = 7.6
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = +3
Query: 213 QEAASRQERGSSE*EARDREDSLEKHDHRSRD 308
+E ++ER S+ E + R KHDHRS D
Sbjct: 349 KEQLRKEERSHSK-EEKSRRKEKSKHDHRSSD 379
>AE014298-727|AAF46025.1| 614|Drosophila melanogaster CG4208-PA
protein.
Length = 614
Score = 27.9 bits (59), Expect = 7.6
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = +3
Query: 213 QEAASRQERGSSE*EARDREDSLEKHDHRSRD 308
+E ++ER S+ E + R KHDHRS D
Sbjct: 349 KEQLRKEERSHSK-EEKSRRKEKSKHDHRSSD 379
>AE014296-1211|AAF50597.1| 460|Drosophila melanogaster CG8616-PA
protein.
Length = 460
Score = 27.9 bits (59), Expect = 7.6
Identities = 14/49 (28%), Positives = 24/49 (48%), Gaps = 1/49 (2%)
Frame = -1
Query: 306 LGNDDHV-SQVSLHDLWLLIRRSLFLGATQLLDQCHWFTFKTTSEPPAR 163
L ++H+ +Q+ H WLL+ S FL W +++ PPA+
Sbjct: 201 LTGEEHIFAQLHSHFSWLLLAGSRFLTEHVTFGNLPWLPPQSSGRPPAQ 249
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,116,963
Number of Sequences: 53049
Number of extensions: 382561
Number of successful extensions: 999
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 982
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 999
length of database: 24,988,368
effective HSP length: 79
effective length of database: 20,797,497
effective search space used: 1663799760
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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