Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP02_F_O15
         (480 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81077-5|CAB03065.1|  151|Caenorhabditis elegans Hypothetical pr...   108   2e-24
Z74033-2|CAA98476.2|  419|Caenorhabditis elegans Hypothetical pr...    27   7.0  
Z74033-1|CAA98475.2|  460|Caenorhabditis elegans Hypothetical pr...    27   7.0  
U80027-2|AAC48132.1|  208|Caenorhabditis elegans Glutathione s-t...    27   9.3  

>Z81077-5|CAB03065.1|  151|Caenorhabditis elegans Hypothetical
           protein F36A2.6 protein.
          Length = 151

 Score =  108 bits (259), Expect = 2e-24
 Identities = 46/59 (77%), Positives = 51/59 (86%)
 Frame = +2

Query: 302 PRWSGSIVGIYNGKTFNQVEIKPEMIGHYLGEFSVTYKPVKHGXPGIGATHSSRFIPLK 478
           P   G ++GIYNGK FNQ EIKPEMIG YLGEF+++YKPVKHG PGIGATHSSRFIPLK
Sbjct: 93  PELVGGVIGIYNGKVFNQTEIKPEMIGFYLGEFAISYKPVKHGRPGIGATHSSRFIPLK 151



 Score = 79.4 bits (187), Expect = 1e-15
 Identities = 40/72 (55%), Positives = 50/72 (69%)
 Frame = +1

Query: 100 VDLDQLLDMPNEQLMELMHXXXXXXXXXGLKRKPMALVKKLRRAKKEAPPNEKPEIVKTH 279
           VDLDQLLDM  EQ  +L+          GLKRK +AL+ K+++AKK A   EKP  VKTH
Sbjct: 26  VDLDQLLDMSREQFTKLLPCRMRRRLDRGLKRKHLALIAKVQKAKKAAGVLEKPATVKTH 85

Query: 280 LRNMIIVPEMVG 315
           LR+MII+PE+VG
Sbjct: 86  LRDMIILPELVG 97



 Score = 29.5 bits (63), Expect = 1.3
 Identities = 15/24 (62%), Positives = 18/24 (75%)
 Frame = +3

Query: 27 TRNMAEVDETLKKKRIFRKFTYRG 98
          T++ A + E LKKKR FRKF YRG
Sbjct: 3  TQDDAHLAE-LKKKRTFRKFMYRG 25


>Z74033-2|CAA98476.2|  419|Caenorhabditis elegans Hypothetical
           protein F38B7.1b protein.
          Length = 419

 Score = 27.1 bits (57), Expect = 7.0
 Identities = 30/136 (22%), Positives = 51/136 (37%)
 Frame = +1

Query: 19  SNKQETWLRSTKPSRKSVFSGSSLTGAVDLDQLLDMPNEQLMELMHXXXXXXXXXGLKRK 198
           S KQ    +++   R + F+GSSL GA +    L  P   +                   
Sbjct: 75  SVKQMDRQQASAIQRPTSFAGSSLFGASEFGNPLGAPGTPIGSQHQMSIGQNLVSASSPY 134

Query: 199 PMALVKKLRRAKKEAPPNEKPEIVKTHLRNMIIVPEMVGFNCRHLQRKNF*PG*NQA*DD 378
               +  +     +APP + P++ KT L        M    C + +R  +  G     + 
Sbjct: 135 STPQLTPMATPNGQAPPPKNPKLYKTELCR----SWMDHGRCNYGERCQYAHG---ELEK 187

Query: 379 RPLPRRVLSHVQACKA 426
           RP+PR      +AC++
Sbjct: 188 RPVPRHPKYKTEACQS 203


>Z74033-1|CAA98475.2|  460|Caenorhabditis elegans Hypothetical
           protein F38B7.1a protein.
          Length = 460

 Score = 27.1 bits (57), Expect = 7.0
 Identities = 30/136 (22%), Positives = 51/136 (37%)
 Frame = +1

Query: 19  SNKQETWLRSTKPSRKSVFSGSSLTGAVDLDQLLDMPNEQLMELMHXXXXXXXXXGLKRK 198
           S KQ    +++   R + F+GSSL GA +    L  P   +                   
Sbjct: 116 SVKQMDRQQASAIQRPTSFAGSSLFGASEFGNPLGAPGTPIGSQHQMSIGQNLVSASSPY 175

Query: 199 PMALVKKLRRAKKEAPPNEKPEIVKTHLRNMIIVPEMVGFNCRHLQRKNF*PG*NQA*DD 378
               +  +     +APP + P++ KT L        M    C + +R  +  G     + 
Sbjct: 176 STPQLTPMATPNGQAPPPKNPKLYKTELCR----SWMDHGRCNYGERCQYAHG---ELEK 228

Query: 379 RPLPRRVLSHVQACKA 426
           RP+PR      +AC++
Sbjct: 229 RPVPRHPKYKTEACQS 244


>U80027-2|AAC48132.1|  208|Caenorhabditis elegans Glutathione
           s-transferase protein23 protein.
          Length = 208

 Score = 26.6 bits (56), Expect = 9.3
 Identities = 12/29 (41%), Positives = 17/29 (58%)
 Frame = +2

Query: 62  EKAYFQEVHLPGQLISISSLICPMSNSWN 148
           ++AY  E  LPG+L+ I  L C  +N  N
Sbjct: 113 KEAYITET-LPGELLRIEKLFCTFNNGEN 140


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,120,780
Number of Sequences: 27780
Number of extensions: 191328
Number of successful extensions: 528
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 495
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 528
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 882200194
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)