Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP02_F_O10
         (654 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090815-2|BAC57906.1|  973|Anopheles gambiae reverse transcript...    26   1.2  
AJ459960-1|CAD31059.1|  696|Anopheles gambiae prophenoloxidase 7...    24   3.7  
AY462096-1|AAS21248.1|  603|Anopheles gambiae transposase protein.     23   6.4  

>AB090815-2|BAC57906.1|  973|Anopheles gambiae reverse transcriptase
           protein.
          Length = 973

 Score = 25.8 bits (54), Expect = 1.2
 Identities = 12/30 (40%), Positives = 19/30 (63%)
 Frame = +3

Query: 357 NLRGVWILKSLNLKF*VKTTQRLCFYNVID 446
           +LR ++IL   NLK  +K ++R CF  + D
Sbjct: 303 DLRRLYILARSNLKRKIKASKRRCFLALCD 332


>AJ459960-1|CAD31059.1|  696|Anopheles gambiae prophenoloxidase 7
           protein.
          Length = 696

 Score = 24.2 bits (50), Expect = 3.7
 Identities = 10/13 (76%), Positives = 11/13 (84%)
 Frame = -1

Query: 276 DTFRQVLTPGISN 238
           DTFR  LTPGI+N
Sbjct: 544 DTFRVNLTPGINN 556


>AY462096-1|AAS21248.1|  603|Anopheles gambiae transposase protein.
          Length = 603

 Score = 23.4 bits (48), Expect = 6.4
 Identities = 14/67 (20%), Positives = 30/67 (44%)
 Frame = +2

Query: 179 KRALLKKNVDLRRXIELIQEFDMPGVSTCLKVSKDGQYIMATGIYKPXIKCFDVNNLSLK 358
           K +  + + D+   I+ +    + G+   LK+ +  + I+ + I  P IK     +   K
Sbjct: 405 KTSQFRNDEDIAENIQNLVALLIEGLQNKLKIYRSNEQILKSMILDPRIKQLGFQDDVEK 464

Query: 359 FERCMDS 379
           F+   +S
Sbjct: 465 FKNICES 471


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 665,242
Number of Sequences: 2352
Number of extensions: 13525
Number of successful extensions: 24
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 64814025
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)