Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP02_F_O10
         (654 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY051935-1|AAK93359.1|  721|Drosophila melanogaster LD41558p pro...   268   6e-72
AE014134-2486|AAF53389.1|  721|Drosophila melanogaster CG7516-PA...   268   6e-72
DQ087677-1|AAZ78530.1|  231|Drosophila melanogaster CHKov1 protein.    29   5.5  
AE013599-3461|AAF46899.2| 1218|Drosophila melanogaster CG3536-PA...    28   9.6  

>AY051935-1|AAK93359.1|  721|Drosophila melanogaster LD41558p
           protein.
          Length = 721

 Score =  268 bits (656), Expect = 6e-72
 Identities = 114/176 (64%), Positives = 143/176 (81%)
 Frame = +2

Query: 122 KFTTLSVGKSIPDWLSERKKRALLKKNVDLRRXIELIQEFDMPGVSTCLKVSKDGQYIMA 301
           K   LS GKS+PDWL++R+KR+ L K VD RR IELIQ+FDMPGV T +++S D QYI+A
Sbjct: 10  KIYNLSAGKSVPDWLTDRRKRSQLMKKVDSRRQIELIQDFDMPGVCTSIRMSPDQQYILA 69

Query: 302 TGIYKPXIKCFDVNNLSLKFERCMDSEVIKFEILSEDYTKIVFLQCDRYVEFHVGHGRHY 481
           TG YKP +KCF+V+NLS+KFERC D+EV  FE++S+DY+K+VFLQCDRYVE H  HGRHY
Sbjct: 70  TGTYKPRVKCFEVSNLSIKFERCFDAEVTTFEVISDDYSKMVFLQCDRYVEIHAAHGRHY 129

Query: 482 RLRVPRFGRDIAYHKPSCDLFVVGNSSEIYRLNLEIGQFLAPYSTKATEMNCCSVN 649
           RLR+PRFGRD+ YHKPSCD+F+VG   +I+RLNLE GQFL P+ T  + +N C VN
Sbjct: 130 RLRIPRFGRDMKYHKPSCDMFIVGVGRDIFRLNLERGQFLQPFETDGSCLNACEVN 185


>AE014134-2486|AAF53389.1|  721|Drosophila melanogaster CG7516-PA
           protein.
          Length = 721

 Score =  268 bits (656), Expect = 6e-72
 Identities = 114/176 (64%), Positives = 143/176 (81%)
 Frame = +2

Query: 122 KFTTLSVGKSIPDWLSERKKRALLKKNVDLRRXIELIQEFDMPGVSTCLKVSKDGQYIMA 301
           K   LS GKS+PDWL++R+KR+ L K VD RR IELIQ+FDMPGV T +++S D QYI+A
Sbjct: 10  KIYNLSAGKSVPDWLTDRRKRSQLMKKVDSRRQIELIQDFDMPGVCTSIRMSPDQQYILA 69

Query: 302 TGIYKPXIKCFDVNNLSLKFERCMDSEVIKFEILSEDYTKIVFLQCDRYVEFHVGHGRHY 481
           TG YKP +KCF+V+NLS+KFERC D+EV  FE++S+DY+K+VFLQCDRYVE H  HGRHY
Sbjct: 70  TGTYKPRVKCFEVSNLSIKFERCFDAEVTTFEVISDDYSKMVFLQCDRYVEIHAAHGRHY 129

Query: 482 RLRVPRFGRDIAYHKPSCDLFVVGNSSEIYRLNLEIGQFLAPYSTKATEMNCCSVN 649
           RLR+PRFGRD+ YHKPSCD+F+VG   +I+RLNLE GQFL P+ T  + +N C VN
Sbjct: 130 RLRIPRFGRDMKYHKPSCDMFIVGVGRDIFRLNLERGQFLQPFETDGSCLNACEVN 185


>DQ087677-1|AAZ78530.1|  231|Drosophila melanogaster CHKov1 protein.
          Length = 231

 Score = 29.1 bits (62), Expect = 5.5
 Identities = 13/32 (40%), Positives = 21/32 (65%)
 Frame = +2

Query: 113 IM*KFTTLSVGKSIPDWLSERKKRALLKKNVD 208
           I+   +T++ GK IPDW++  +   +LK NVD
Sbjct: 13  ILIPISTMAAGK-IPDWVTAERFEDVLKSNVD 43


>AE013599-3461|AAF46899.2| 1218|Drosophila melanogaster CG3536-PA
           protein.
          Length = 1218

 Score = 28.3 bits (60), Expect = 9.6
 Identities = 12/45 (26%), Positives = 20/45 (44%)
 Frame = -2

Query: 593 GQFLNSIYKFPRNFQLQRGHKKACGMLYLFRNVELGVYNVGHDPH 459
           G + N   ++PR+   Q+GH  A    +    ++     V H PH
Sbjct: 391 GNYCNGTDRYPRSRSQQQGHHNAAQQAHHPYQLQHSASTVSHHPH 435


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,317,432
Number of Sequences: 53049
Number of extensions: 542381
Number of successful extensions: 1271
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1248
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1271
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2786177250
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)