Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP02_F_O10
         (654 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U41992-8|AAA83359.1|  754|Caenorhabditis elegans Hypothetical pr...   192   1e-49

>U41992-8|AAA83359.1|  754|Caenorhabditis elegans Hypothetical
           protein F32E10.1 protein.
          Length = 754

 Score =  192 bits (469), Expect = 1e-49
 Identities = 85/175 (48%), Positives = 130/175 (74%)
 Frame = +2

Query: 122 KFTTLSVGKSIPDWLSERKKRALLKKNVDLRRXIELIQEFDMPGVSTCLKVSKDGQYIMA 301
           K   LS GKS+P+W+S R +R L ++N D+R+ I+LIQ+F+MP VS  + ++ DG+Y+ A
Sbjct: 10  KIYNLSAGKSLPEWMSSRTRRKLEQRNTDVRQRIQLIQDFEMPDVSNTVNITPDGKYVWA 69

Query: 302 TGIYKPXIKCFDVNNLSLKFERCMDSEVIKFEILSEDYTKIVFLQCDRYVEFHVGHGRHY 481
           +G YKP ++C+D+NNLSLKFER +D++VIK   LS+DY+K+V L+ +R++E H   GR++
Sbjct: 70  SGNYKPWLRCYDLNNLSLKFERGLDADVIKLIPLSDDYSKVVILEEERWIEMHAMLGRYF 129

Query: 482 RLRVPRFGRDIAYHKPSCDLFVVGNSSEIYRLNLEIGQFLAPYSTKATEMNCCSV 646
           R+R+P  GRD+A  + S DL++VG+ SE+YR NLE G +L P+ + A  +NC  V
Sbjct: 130 RMRMPCQGRDMALSEESSDLYLVGSKSEVYRFNLEQGCWLTPFESTA-PLNCVQV 183


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,678,921
Number of Sequences: 27780
Number of extensions: 305530
Number of successful extensions: 744
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 724
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 744
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1455289764
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)