Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP02_F_O05
(632 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P26373 Cluster: 60S ribosomal protein L13; n=111; Eukar... 224 1e-57
UniRef50_Q4PAD9 Cluster: 60S ribosomal protein L13; n=2; Basidio... 164 2e-39
UniRef50_Q9FF90 Cluster: 60S ribosomal protein L13-3; n=27; Viri... 163 3e-39
UniRef50_UPI0000D563A2 Cluster: PREDICTED: similar to 60S riboso... 154 1e-36
UniRef50_Q57V55 Cluster: 60S ribosomal protein L13, putative; n=... 139 4e-32
UniRef50_O59931 Cluster: 60S ribosomal protein L13; n=5; Ascomyc... 138 1e-31
UniRef50_A1D9H8 Cluster: 60S ribosomal protein L13; n=26; Fungi/... 130 3e-29
UniRef50_A0CPH3 Cluster: 60S ribosomal protein L13; n=9; Oligohy... 129 5e-29
UniRef50_A3FQ93 Cluster: 60S ribosomal protein L13, putative; n=... 127 2e-28
UniRef50_Q4N9B5 Cluster: 60S ribosomal protein L13e, putative; n... 122 7e-27
UniRef50_A2EYN3 Cluster: 60S ribosomal protein L13; n=6; Trichom... 118 1e-25
UniRef50_Q4X4D3 Cluster: 60S ribosomal protein L13, putative; n=... 106 4e-22
UniRef50_O15616 Cluster: 60S ribosomal protein L13; n=3; Entamoe... 99 8e-20
UniRef50_UPI0000DC2213 Cluster: UPI0000DC2213 related cluster; n... 90 4e-17
UniRef50_Q8SSC1 Cluster: 60S RIBOSOMAL PROTEIN L13; n=1; Encepha... 87 3e-16
UniRef50_Q9AW85 Cluster: 60S ribosomal protein L13; n=1; Guillar... 69 1e-10
UniRef50_O14377 Cluster: Putative uncharacterized protein; n=1; ... 60 6e-08
UniRef50_UPI00005A0D5A Cluster: PREDICTED: similar to ribosomal ... 54 3e-06
UniRef50_A3DKW5 Cluster: 50S ribosomal protein L13e; n=1; Staphy... 43 0.005
UniRef50_Q9YEN9 Cluster: 50S ribosomal protein L13e; n=3; Desulf... 42 0.012
UniRef50_Q018B3 Cluster: Chromosome 05 contig 1, DNA sequence; n... 41 0.022
UniRef50_Q6LAB9 Cluster: 60S ribosomal protein L13; n=1; Arabido... 40 0.050
UniRef50_A2YRI3 Cluster: 60S ribosomal protein L13; n=2; Oryza s... 39 0.11
UniRef50_Q8ZWS7 Cluster: 60S ribosomal protein L13; n=4; Pyrobac... 39 0.11
UniRef50_A3H6W8 Cluster: Ribosomal protein L13; n=1; Caldivirga ... 39 0.11
UniRef50_P58469 Cluster: 50S ribosomal protein L13e; n=1; Sulfol... 38 0.26
UniRef50_Q97W05 Cluster: 50S ribosomal protein L13e; n=2; Sulfol... 38 0.26
UniRef50_A1RY56 Cluster: 60S ribosomal protein L13; n=1; Thermof... 37 0.46
UniRef50_UPI0000E49D21 Cluster: PREDICTED: similar to LOC495497 ... 34 2.5
UniRef50_A6T0S2 Cluster: Mechanosensitive ion channel protein; n... 34 3.3
UniRef50_Q9LTC0 Cluster: Protein serine/threonine kinase-like; n... 33 5.7
UniRef50_UPI00015BAF4C Cluster: LSU ribosomal protein L13E; n=1;... 32 10.0
UniRef50_Q6RKJ4 Cluster: Polyketide synthase; n=4; Sclerotiniace... 32 10.0
>UniRef50_P26373 Cluster: 60S ribosomal protein L13; n=111;
Eukaryota|Rep: 60S ribosomal protein L13 - Homo sapiens
(Human)
Length = 211
Score = 224 bits (548), Expect = 1e-57
Identities = 113/191 (59%), Positives = 134/191 (70%), Gaps = 1/191 (0%)
Frame = +2
Query: 59 NNMIPNGHFHKDWQRFVKTWFNQPARRYRRKQNXIXXXXXXXXXXXXXXLRPIVRCPTVR 238
N M+ HFHKDWQR V TWFNQPAR+ RR++ +RPIVRCPTVR
Sbjct: 6 NGMVLKPHFHKDWQRRVATWFNQPARKIRRRKARQAKARRIAPRPASGPIRPIVRCPTVR 65
Query: 239 YHTKVRAGRGFTLREIRAAGLNPVFARTIGIAVXPRRRNKSVESLQINVQRIKEYRARLI 418
YHTKVRAGRGF+L E+R AG++ ARTIGI+V PRRRNKS ESLQ NVQR+KEYR++LI
Sbjct: 66 YHTKVRAGRGFSLEELRVAGIHKKVARTIGISVDPRRRNKSTESLQANVQRLKEYRSKLI 125
Query: 419 LFP-KGKKVLXGEANEXXRKLATQLRGPLMPVQQPAPKSVARPITEXEKNFKAYQYLRGA 595
LFP K G+++ KLATQL GP+MPV+ K AR ITE EKNFKA+ LR A
Sbjct: 126 LFPRKPSAPKKGDSSAEELKLATQLTGPVMPVRNVYKKEKARVITEEEKNFKAFASLRMA 185
Query: 596 RSIAKLVGIRA 628
R+ A+L GIRA
Sbjct: 186 RANARLFGIRA 196
>UniRef50_Q4PAD9 Cluster: 60S ribosomal protein L13; n=2;
Basidiomycota|Rep: 60S ribosomal protein L13 - Ustilago
maydis (Smut fungus)
Length = 209
Score = 164 bits (398), Expect = 2e-39
Identities = 83/189 (43%), Positives = 112/189 (59%)
Frame = +2
Query: 53 KGNNMIPNGHFHKDWQRFVKTWFNQPARRYRRKQNXIXXXXXXXXXXXXXXLRPIVRCPT 232
K NN++ N HF KDWQR VK WF+QP + RR+ LRP VRCPT
Sbjct: 4 KHNNILHNNHFRKDWQRRVKVWFDQPGAKKRRR-TAREAKAAKLGLRPVQLLRPAVRCPT 62
Query: 233 VRYHTKVRAGRGFTLREIRAAGLNPVFARTIGIAVXPRRRNKSVESLQINVQRIKEYRAR 412
+RY+TK+R+GRGFT+ E++AAGL +AR++GI V RRRNKS ESL++NV+RIK Y+AR
Sbjct: 63 LRYNTKIRSGRGFTIEEVKAAGLGKKYARSVGIPVDHRRRNKSEESLKLNVERIKAYQAR 122
Query: 413 LILFPKGKKVLXGEANEXXRKLATQLRGPLMPVQQPAPKSVARPITEXEKNFKAYQYLRG 592
L++ PK K + + A + ++P+ R IT EK F AY+ LR
Sbjct: 123 LVVIPKLTKKNKDKKVDLSNVEAVRQVQSVLPLPAGTEAEKPRAITSEEKEFNAYETLRK 182
Query: 593 ARSIAKLVG 619
AR + G
Sbjct: 183 ARGTHRAAG 191
>UniRef50_Q9FF90 Cluster: 60S ribosomal protein L13-3; n=27;
Viridiplantae|Rep: 60S ribosomal protein L13-3 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 206
Score = 163 bits (396), Expect = 3e-39
Identities = 83/193 (43%), Positives = 117/193 (60%), Gaps = 1/193 (0%)
Frame = +2
Query: 53 KGNNMIPNGHFHKDWQRFVKTWFNQPARRYRRKQNXIXXXXXXXXXXXXXXLRPIVRCPT 232
K NN+IP+ HF K WQ +VKTWFNQPAR+ RR+ LRP+V T
Sbjct: 2 KHNNVIPSSHFRKHWQNYVKTWFNQPARKTRRRVARQKKAVKIFPRPTSGPLRPVVHGQT 61
Query: 233 VRYHTKVRAGRGFTLREIRAAGLNPVFARTIGIAVXPRRRNKSVESLQINVQRIKEYRAR 412
++Y+ KVRAG+GFTL E++ AG+ A TIGI+V RR+N+S+E LQ NVQR+K Y+A+
Sbjct: 62 LKYNMKVRAGKGFTLEELKVAGIPKKLAPTIGISVDHRRKNRSLEGLQSNVQRLKTYKAK 121
Query: 413 LILFP-KGKKVLXGEANEXXRKLATQLRGPLMPVQQPAPKSVARPITEXEKNFKAYQYLR 589
L++FP + ++V G++ ATQ++G MP+ +T K FKAY +R
Sbjct: 122 LVVFPRRSRQVKAGDSTPEELANATQVQGDYMPIASVKAAMELVKLTADLKAFKAYDKIR 181
Query: 590 GARSIAKLVGIRA 628
R+ A+ G RA
Sbjct: 182 LERTNARHAGARA 194
>UniRef50_UPI0000D563A2 Cluster: PREDICTED: similar to 60S ribosomal
protein L13; n=1; Tribolium castaneum|Rep: PREDICTED:
similar to 60S ribosomal protein L13 - Tribolium
castaneum
Length = 198
Score = 154 bits (374), Expect = 1e-36
Identities = 86/194 (44%), Positives = 113/194 (58%), Gaps = 1/194 (0%)
Frame = +2
Query: 47 MGKGNNMIPNGHFHKDWQRFVKTWFNQPARRYRRKQNXIXXXXXXXXXXXXXXLRPIVRC 226
M + NNMIPNGHFHK WQ+ VK WFNQP ++ RRK LRP+V C
Sbjct: 1 MVRHNNMIPNGHFHKKWQQKVKLWFNQPMKKLRRKALR-AKKSRQLAPKPTELLRPLVHC 59
Query: 227 PTVRYHTKVRAGRGFTLREIRAAGLNPVFARTIGIAVXPRRRNKSVESLQINVQRIKEYR 406
P+ RY +KVRAGRGFT +E++ AG++ +AR+ G+AV PRRRN+ ES+ N+QR+ EY+
Sbjct: 60 PSERYKSKVRAGRGFTFQELKQAGMSDKYARSFGVAVDPRRRNRCTESIAANIQRLIEYK 119
Query: 407 ARLILFPKGK-KVLXGEANEXXRKLATQLRGPLMPVQQPAPKSVARPITEXEKNFKAYQY 583
+RLI P K KVL + + L V+ K A + E EK F+A+
Sbjct: 120 SRLIFLPDSKNKVLKIDDGKN-----------LNVVKVVPGKVKALKVGEEEKKFEAFVT 168
Query: 584 LRGARSIAKLVGIR 625
LR AR K GIR
Sbjct: 169 LRRARCDEKFAGIR 182
>UniRef50_Q57V55 Cluster: 60S ribosomal protein L13, putative; n=7;
Trypanosomatidae|Rep: 60S ribosomal protein L13,
putative - Trypanosoma brucei
Length = 229
Score = 139 bits (337), Expect = 4e-32
Identities = 86/205 (41%), Positives = 114/205 (55%), Gaps = 12/205 (5%)
Frame = +2
Query: 47 MGKGNNMIPNGHFHKDWQRF------VKTWFNQPARRYRRKQNXIXXXXXXXXXXXXXXL 208
M KGNN IP+ H K W VK +FNQPA++ RR++ + L
Sbjct: 12 MPKGNNAIPHVHQRKHWNPCSSQKGNVKVFFNQPAQKQRRRRLRLLKAKKIFPRPLKA-L 70
Query: 209 RPIVRCPTVRYHTKVRAGRGFTLREIRAAGLNPVFARTIGIAVXPRRRNKSVESLQINVQ 388
RP V CPTVRY+ K R GRGF+L E++AAG+ P +ARTIGI V RR+NKS E + INVQ
Sbjct: 71 RPQVNCPTVRYNMKRRLGRGFSLEELKAAGVKPRYARTIGIRVDRRRKNKSEEGMNINVQ 130
Query: 389 RIKEYRARLILFP-KGKKVLXGEANEXXRKLATQLR-----GPLMPVQQPAPKSVARPIT 550
R+K Y ++L+LFP KK G+A E K ATQ R + + PA + R +T
Sbjct: 131 RLKTYMSKLVLFPLNRKKPQKGDATEEEVKAATQDRSRYGTAAVGGLVTPA-REAPRKVT 189
Query: 551 EXEKNFKAYQYLRGARSIAKLVGIR 625
E E K Y++L+ S + R
Sbjct: 190 EEESTKKMYKFLKKNHSAVRFFRAR 214
>UniRef50_O59931 Cluster: 60S ribosomal protein L13; n=5;
Ascomycota|Rep: 60S ribosomal protein L13 - Candida
albicans (Yeast)
Length = 202
Score = 138 bits (334), Expect = 1e-31
Identities = 78/184 (42%), Positives = 109/184 (59%)
Frame = +2
Query: 74 NGHFHKDWQRFVKTWFNQPARRYRRKQNXIXXXXXXXXXXXXXXLRPIVRCPTVRYHTKV 253
N HF K WQ V+ F+Q ++ R+Q+ + LRP+VR PTV+Y+ KV
Sbjct: 11 NNHFRKHWQERVRVHFDQAGKKASRRQSRLRKAAKIAPRPIDA-LRPVVRAPTVKYNRKV 69
Query: 254 RAGRGFTLREIRAAGLNPVFARTIGIAVXPRRRNKSVESLQINVQRIKEYRARLILFPKG 433
RAGRGFTL E++A G+ P +ARTIGI+V RR+NKS E+ NV R++EY+++L++F K
Sbjct: 70 RAGRGFTLAELKAVGIAPKYARTIGISVDHRRQNKSQETFDANVARLQEYKSKLVIFDKK 129
Query: 434 KKVLXGEANEXXRKLATQLRGPLMPVQQPAPKSVARPITEXEKNFKAYQYLRGARSIAKL 613
K + E AT PV+QPAP+S R + E+ AY+ LR AR+ K
Sbjct: 130 TKASEVASFEQVDVSAT------FPVEQPAPESGLRAVEVPEQT--AYRTLRLARNEKKY 181
Query: 614 VGIR 625
GIR
Sbjct: 182 KGIR 185
>UniRef50_A1D9H8 Cluster: 60S ribosomal protein L13; n=26;
Fungi/Metazoa group|Rep: 60S ribosomal protein L13 -
Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / NRRL
181)(Aspergillus fischerianus (strain ATCC 1020 / DSM
3700 / NRRL 181))
Length = 243
Score = 130 bits (314), Expect = 3e-29
Identities = 83/201 (41%), Positives = 112/201 (55%), Gaps = 20/201 (9%)
Frame = +2
Query: 83 FHKDWQRFVKTWFNQPARRYRRKQNXIXXXXXXXXXXXXXXLRPIVRCPTVRYHTKVRAG 262
FHKDWQR V+ F+QP R++RR++ + LRP+VRCPTV+Y+ +VR G
Sbjct: 31 FHKDWQRRVRVHFDQPGRKHRRREARLAKAAAVAPRPVDK-LRPVVRCPTVKYNRRVRVG 89
Query: 263 RGFTLREIRAAGLNPVFARTIGIAVXPRRRNKSVESLQINVQRIKEYRARLILFPKGK-- 436
RGFTL E++ AG+ ART+GIAV RR N S ESL NV R+K+Y+ARLILFP+
Sbjct: 90 RGFTLAELKEAGIPKKLARTVGIAVDHRRVNYSKESLVANVARLKDYKARLILFPRKSGQ 149
Query: 437 -KVLXGEANEXXRKLA-----------TQLRGPLMPVQQPAPKSVARPITEXEKN----- 565
K L A+E A T G + P++ S A +TE +++
Sbjct: 150 FKKLDSSADEVNAAKAAFAAEGKTEGYTTKLGAIFPIKN---ISAAEAVTEVKRDELPKG 206
Query: 566 -FKAYQYLRGARSIAKLVGIR 625
AY+ LR RS A+ GIR
Sbjct: 207 EEAAYRRLRETRSEARYKGIR 227
>UniRef50_A0CPH3 Cluster: 60S ribosomal protein L13; n=9;
Oligohymenophorea|Rep: 60S ribosomal protein L13 -
Paramecium tetraurelia
Length = 208
Score = 129 bits (312), Expect = 5e-29
Identities = 76/197 (38%), Positives = 106/197 (53%), Gaps = 6/197 (3%)
Frame = +2
Query: 53 KGNNMIPNGHFHKDWQRFVKTWFNQPARRYRRKQNXIXXXXXXXXXXXXXXLRPIVRCPT 232
K N +PN H K W RFVKT++NQPA + RR+Q LRP+VR T
Sbjct: 2 KHNQQLPNAHMRKHWTRFVKTFYNQPAAK-RRRQLRRRAQALSASPRPVELLRPVVRGQT 60
Query: 233 VRYHTKVRAGRGFTLREIRAAGLNPVFARTIGIAVXPRRRNKSVESLQINVQRIKEYRAR 412
++Y++ + GRGF+L E++ AGLN FART+GI+V RRRN + E L NV+R+K Y ++
Sbjct: 61 IKYNSVQKLGRGFSLIELKEAGLNAAFARTVGISVDHRRRNLNQEELNNNVKRLKAYLSK 120
Query: 413 LILFPK--GKK---VLXGEANEXXRKLATQLRGPLMPVQQPAPKSVARPITEXEKNFK-A 574
L+L+P+ GK V+ NE Q P + Q PK + E K
Sbjct: 121 LVLYPRVAGKPKNGVVKDSTNEVVAHPVAQNTNPEVLTFQRTPKREKATVISKELRAKNV 180
Query: 575 YQYLRGARSIAKLVGIR 625
Y+ LR AK VG++
Sbjct: 181 YRRLRQEWYNAKFVGVK 197
>UniRef50_A3FQ93 Cluster: 60S ribosomal protein L13, putative; n=2;
Cryptosporidium|Rep: 60S ribosomal protein L13, putative
- Cryptosporidium parvum Iowa II
Length = 207
Score = 127 bits (307), Expect = 2e-28
Identities = 77/198 (38%), Positives = 104/198 (52%), Gaps = 8/198 (4%)
Frame = +2
Query: 59 NNMIPNGHFHKDWQRFVKTWFNQPARRYRRKQNXIXXXXXXXXXXXXXXLRPIVRCPTVR 238
NN+IPN H+HK+++R++KTW+NQP R+ R+ LRPIV PT R
Sbjct: 4 NNVIPNVHYHKNYKRWIKTWYNQPGRKQSRRIAR-QKAVAEAGFRPVGMLRPIVHPPTQR 62
Query: 239 YHTKVRAGRGFTLREIRAAGLNPVFARTIGIAVXPRRRNKSVESLQINVQRIKEYRARLI 418
Y+ K R GRGFTL E+ A G+N A +IGIAV RR + S E+ QINV R+K+Y ++
Sbjct: 63 YNMKTRLGRGFTLEELSACGINKKAAMSIGIAVDHRRTDLSEETFQINVDRLKKYINGIV 122
Query: 419 LFP-KGKKVLXG-------EANEXXRKLATQLRGPLMPVQQPAPKSVARPITEXEKNFKA 574
L P KGKK G A E + L P++ IT E+ F+A
Sbjct: 123 LQPRKGKKTKKGFAGIPNDSAREEFKALKNVSHEKAFPIKAQTLAVKTHVITPEERKFRA 182
Query: 575 YQYLRGARSIAKLVGIRA 628
+ LR AK G +A
Sbjct: 183 FSTLRKQFIEAKNFGKKA 200
>UniRef50_Q4N9B5 Cluster: 60S ribosomal protein L13e, putative; n=4;
Piroplasmida|Rep: 60S ribosomal protein L13e, putative -
Theileria parva
Length = 205
Score = 122 bits (294), Expect = 7e-27
Identities = 78/197 (39%), Positives = 103/197 (52%), Gaps = 9/197 (4%)
Frame = +2
Query: 47 MGKGNNMIPNGHFHKDWQRFVKTWFNQPARRYRRKQNXIXXXXXXXXXXXXXXLRPIVRC 226
M K NNM+ + H K RFVK NQ ++ RR+ LRP+V
Sbjct: 1 MVKHNNMLSDVHRVKCSHRFVKPVLNQAGKKKRRRLAR-QRKAAASGLTPTGYLRPLVHM 59
Query: 227 PTVRYHTKVRAGRGFTLREIRAAGLNPVFARTIGIAVXPRRRNKSVESLQINVQRIKEYR 406
P+ RY+ K+R GRGFTL+E++ AGL AR++G+AV RR NK ESL +NV R+K Y
Sbjct: 60 PSRRYNYKLRFGRGFTLQELKVAGLGKKVARSVGVAVDHRRTNKCAESLNLNVNRLKTYL 119
Query: 407 ARLILFPKGKKVLXGEA-------NEXXRKLA--TQLRGPLMPVQQPAPKSVARPITEXE 559
++L+LFP+ K G A E R LA Q +MPV Q K R +TE +
Sbjct: 120 SKLVLFPRKKHAKKGFAGLPSDTPREKLRTLALTKQSVKKVMPVVQEFVKEPPREVTEKD 179
Query: 560 KNFKAYQYLRGARSIAK 610
+ Y LR AR AK
Sbjct: 180 TSVNVYHKLRVARKAAK 196
>UniRef50_A2EYN3 Cluster: 60S ribosomal protein L13; n=6;
Trichomonas vaginalis G3|Rep: 60S ribosomal protein L13
- Trichomonas vaginalis G3
Length = 210
Score = 118 bits (284), Expect = 1e-25
Identities = 63/140 (45%), Positives = 80/140 (57%)
Frame = +2
Query: 23 PW*NSDVKMGKGNNMIPNGHFHKDWQRFVKTWFNQPARRYRRKQNXIXXXXXXXXXXXXX 202
PW ++M NN IPN H K W VKT+F+ PAR RR+
Sbjct: 16 PW--PFLEMVAKNNQIPNDHLRKYWYHRVKTYFDDPARAQRRRNARNLRAKKIAPRPAEG 73
Query: 203 XLRPIVRCPTVRYHTKVRAGRGFTLREIRAAGLNPVFARTIGIAVXPRRRNKSVESLQIN 382
LRPIVRCPTVRY+ K R GRGFT +E+ AAG +P AR GIAV RR + ++ N
Sbjct: 74 PLRPIVRCPTVRYNMKTRLGRGFTPKELVAAGFDPALARFQGIAVDARRAHSKDAMVKQN 133
Query: 383 VQRIKEYRARLILFPKGKKV 442
V+R++ Y+ARLI KG+ V
Sbjct: 134 VERLQAYKARLIKVKKGETV 153
>UniRef50_Q4X4D3 Cluster: 60S ribosomal protein L13, putative; n=5;
Plasmodium|Rep: 60S ribosomal protein L13, putative -
Plasmodium chabaudi
Length = 215
Score = 106 bits (255), Expect = 4e-22
Identities = 53/126 (42%), Positives = 75/126 (59%)
Frame = +2
Query: 59 NNMIPNGHFHKDWQRFVKTWFNQPARRYRRKQNXIXXXXXXXXXXXXXXLRPIVRCPTVR 238
NN++PN H HK WQR+V+ FN+ +R +R+ L P+V CPT R
Sbjct: 5 NNVLPNVHLHKWWQRYVRVDFNKNIKRKQRRLLR-EKRRKQNGGTPIEKLHPVVHCPTQR 63
Query: 239 YHTKVRAGRGFTLREIRAAGLNPVFARTIGIAVXPRRRNKSVESLQINVQRIKEYRARLI 418
Y+ K R G+GFTL EI+A L P AR+IGI V RR+N+ ESL+ N +R+++Y L+
Sbjct: 64 YNYKTRLGKGFTLEEIKAVKLTPSAARSIGIIVDKRRKNRCEESLKENAERLQKYLNSLV 123
Query: 419 LFPKGK 436
+ P K
Sbjct: 124 MIPLKK 129
>UniRef50_O15616 Cluster: 60S ribosomal protein L13; n=3; Entamoeba
histolytica|Rep: 60S ribosomal protein L13 - Entamoeba
histolytica
Length = 138
Score = 99.1 bits (236), Expect = 8e-20
Identities = 52/121 (42%), Positives = 68/121 (56%)
Frame = +2
Query: 83 FHKDWQRFVKTWFNQPARRYRRKQNXIXXXXXXXXXXXXXXLRPIVRCPTVRYHTKVRAG 262
F KDW+ V TW QP R+ RR Q + L+P V C R++ K+R G
Sbjct: 12 FGKDWRSKVHTWVQQPFRKIRRHQTRVEKAKSVFPATIKS-LKPSVHCMNQRFNYKLRLG 70
Query: 263 RGFTLREIRAAGLNPVFARTIGIAVXPRRRNKSVESLQINVQRIKEYRARLILFPKGKKV 442
RGF+L+E+RAA ++ ARTIGIAV PRR+ S E L N QR+ EY RL L K+
Sbjct: 71 RGFSLKELRAAKIDKNLARTIGIAVDPRRKESSKECLTRNAQRLTEYMNRLCLKSVSVKI 130
Query: 443 L 445
+
Sbjct: 131 V 131
>UniRef50_UPI0000DC2213 Cluster: UPI0000DC2213 related cluster; n=1;
Rattus norvegicus|Rep: UPI0000DC2213 UniRef100 entry -
Rattus norvegicus
Length = 173
Score = 90.2 bits (214), Expect = 4e-17
Identities = 41/78 (52%), Positives = 56/78 (71%)
Frame = +2
Query: 206 LRPIVRCPTVRYHTKVRAGRGFTLREIRAAGLNPVFARTIGIAVXPRRRNKSVESLQINV 385
+RPIVRCPTVRYHTKVR GRGF+L EIR AG++ ARTI I+V P+++ K E +
Sbjct: 13 IRPIVRCPTVRYHTKVRGGRGFSLEEIRLAGIHKKMARTIDISVDPKKKKKKKERKKEKN 72
Query: 386 QRIKEYRARLILFPKGKK 439
+R+ E + I++PK +K
Sbjct: 73 ERVTETNQKDIIYPKREK 90
>UniRef50_Q8SSC1 Cluster: 60S RIBOSOMAL PROTEIN L13; n=1;
Encephalitozoon cuniculi|Rep: 60S RIBOSOMAL PROTEIN L13
- Encephalitozoon cuniculi
Length = 163
Score = 87.0 bits (206), Expect = 3e-16
Identities = 56/158 (35%), Positives = 77/158 (48%)
Frame = +2
Query: 53 KGNNMIPNGHFHKDWQRFVKTWFNQPARRYRRKQNXIXXXXXXXXXXXXXXLRPIVRCPT 232
KGN+ +PN HF K + + P + R LRPIVRCPT
Sbjct: 2 KGNHALPNNHFRKTSLKI--RIHHDPETKARVMAEKKLRKAKALFPMPLKKLRPIVRCPT 59
Query: 233 VRYHTKVRAGRGFTLREIRAAGLNPVFARTIGIAVXPRRRNKSVESLQINVQRIKEYRAR 412
++Y+ R GRGFT E AGL+ AR +GIAV RRR+ + E+ NV+RIK Y +
Sbjct: 60 IKYNRNERLGRGFTAAECEKAGLDYRHARRLGIAVDLRRRDTNQEAFDKNVERIKTYLGK 119
Query: 413 LILFPKGKKVLXGEANEXXRKLATQLRGPLMPVQQPAP 526
+ ++ K EA E K T+ +MP +P P
Sbjct: 120 ITIYESVK-----EARESGAKPYTK---EIMPFVKPKP 149
>UniRef50_Q9AW85 Cluster: 60S ribosomal protein L13; n=1; Guillardia
theta|Rep: 60S ribosomal protein L13 - Guillardia theta
(Cryptomonas phi)
Length = 127
Score = 68.5 bits (160), Expect = 1e-10
Identities = 33/97 (34%), Positives = 54/97 (55%), Gaps = 1/97 (1%)
Frame = +2
Query: 77 GHFHKDWQRFVKTWFNQPARRY-RRKQNXIXXXXXXXXXXXXXXLRPIVRCPTVRYHTKV 253
GHF K W+ V T FNQP + RRK L+P+V+CPT ++TK+
Sbjct: 10 GHFRKKWKNLVITNFNQPILKIKRRKIRKNKKKNFLKKAIFYKKLKPLVKCPTRMHNTKI 69
Query: 254 RAGRGFTLREIRAAGLNPVFARTIGIAVXPRRRNKSV 364
+ GRGF+++EI+ + + A + GI++ RR+ ++
Sbjct: 70 KLGRGFSIQEIKKSMIKLKTATSYGISIDKRRKKSNI 106
>UniRef50_O14377 Cluster: Putative uncharacterized protein; n=1;
Schizosaccharomyces pombe|Rep: Putative uncharacterized
protein - Schizosaccharomyces pombe (Fission yeast)
Length = 70
Score = 59.7 bits (138), Expect = 6e-08
Identities = 21/28 (75%), Positives = 25/28 (89%)
Frame = +2
Query: 68 IPNGHFHKDWQRFVKTWFNQPARRYRRK 151
+PN HFHKDWQR+VKTWFNQP R+ RR+
Sbjct: 12 LPNAHFHKDWQRYVKTWFNQPGRKLRRQ 39
>UniRef50_UPI00005A0D5A Cluster: PREDICTED: similar to ribosomal
protein L13 isoform 4; n=1; Canis lupus familiaris|Rep:
PREDICTED: similar to ribosomal protein L13 isoform 4 -
Canis familiaris
Length = 102
Score = 54.0 bits (124), Expect = 3e-06
Identities = 22/30 (73%), Positives = 23/30 (76%)
Frame = +2
Query: 59 NNMIPNGHFHKDWQRFVKTWFNQPARRYRR 148
N MI HFHKDWQR V TWFNQPAR+ RR
Sbjct: 6 NGMILKPHFHKDWQRRVATWFNQPARKIRR 35
>UniRef50_A3DKW5 Cluster: 50S ribosomal protein L13e; n=1;
Staphylothermus marinus F1|Rep: 50S ribosomal protein
L13e - Staphylothermus marinus (strain ATCC 43588 / DSM
3639 / F1)
Length = 86
Score = 43.2 bits (97), Expect = 0.005
Identities = 25/72 (34%), Positives = 41/72 (56%), Gaps = 4/72 (5%)
Frame = +2
Query: 212 PIVRCPTVRYH----TKVRAGRGFTLREIRAAGLNPVFARTIGIAVXPRRRNKSVESLQI 379
PIVR P +R H +R GRGF+ +E+ A GL+ A+ +G+ + RRR +
Sbjct: 10 PIVRKPMLRKHGGLSPGLRVGRGFSKKELEAVGLDLKTAKKLGLRIDKRRRTIH----EW 65
Query: 380 NVQRIKEYRARL 415
NVQ +++Y ++
Sbjct: 66 NVQALRDYLTKI 77
>UniRef50_Q9YEN9 Cluster: 50S ribosomal protein L13e; n=3;
Desulfurococcales|Rep: 50S ribosomal protein L13e -
Aeropyrum pernix
Length = 80
Score = 41.9 bits (94), Expect = 0.012
Identities = 23/53 (43%), Positives = 35/53 (66%), Gaps = 3/53 (5%)
Frame = +2
Query: 251 VRAGRGFTLREIRAAGLNPVFARTIGIAVXPRRRNK---SVESLQINVQRIKE 400
VR GRGF+L E+ AGL+ AR +G+ V RRR +VE+L+ ++R++E
Sbjct: 23 VRRGRGFSLGELAEAGLDAKKARKLGLHVDTRRRTVHPWNVEALKKYIERLRE 75
>UniRef50_Q018B3 Cluster: Chromosome 05 contig 1, DNA sequence; n=1;
Ostreococcus tauri|Rep: Chromosome 05 contig 1, DNA
sequence - Ostreococcus tauri
Length = 527
Score = 41.1 bits (92), Expect = 0.022
Identities = 23/46 (50%), Positives = 24/46 (52%)
Frame = -3
Query: 321 VRANTGFNPAALISRRVNPLPARTLVWYRTVGHRTIGRNGPAAGRG 184
VRA T S V P P R L YR VG TIGR+ PA GRG
Sbjct: 398 VRARTMAITRTFNSSSVKPRPRRVLKLYRCVGGCTIGRSAPATGRG 443
>UniRef50_Q6LAB9 Cluster: 60S ribosomal protein L13; n=1;
Arabidopsis thaliana|Rep: 60S ribosomal protein L13 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 87
Score = 39.9 bits (89), Expect = 0.050
Identities = 16/32 (50%), Positives = 24/32 (75%)
Frame = +2
Query: 206 LRPIVRCPTVRYHTKVRAGRGFTLREIRAAGL 301
LRP+V T++Y+ KV +GFTL E++AAG+
Sbjct: 52 LRPVVHGQTLKYNMKVSTXKGFTLEELKAAGI 83
>UniRef50_A2YRI3 Cluster: 60S ribosomal protein L13; n=2; Oryza
sativa|Rep: 60S ribosomal protein L13 - Oryza sativa
subsp. indica (Rice)
Length = 138
Score = 38.7 bits (86), Expect = 0.11
Identities = 15/26 (57%), Positives = 21/26 (80%)
Frame = +2
Query: 212 PIVRCPTVRYHTKVRAGRGFTLREIR 289
PIV+C T++Y+ K RAGRGF L E++
Sbjct: 47 PIVQCQTLKYNMKSRAGRGFILEELK 72
>UniRef50_Q8ZWS7 Cluster: 60S ribosomal protein L13; n=4;
Pyrobaculum|Rep: 60S ribosomal protein L13 - Pyrobaculum
aerophilum
Length = 159
Score = 38.7 bits (86), Expect = 0.11
Identities = 21/59 (35%), Positives = 34/59 (57%), Gaps = 3/59 (5%)
Frame = +2
Query: 209 RPIVRCPTVRYH---TKVRAGRGFTLREIRAAGLNPVFARTIGIAVXPRRRNKSVESLQ 376
+P+V+ P H K + GRGF++ E+RA GL+ AR +GI V RR ++++
Sbjct: 6 KPLVKTPAKITHGGVVKWKYGRGFSIGELRALGLSVDQARLLGIPVDERRETSWPQNIE 64
>UniRef50_A3H6W8 Cluster: Ribosomal protein L13; n=1; Caldivirga
maquilingensis IC-167|Rep: Ribosomal protein L13 -
Caldivirga maquilingensis IC-167
Length = 144
Score = 38.7 bits (86), Expect = 0.11
Identities = 20/57 (35%), Positives = 37/57 (64%)
Frame = +2
Query: 248 KVRAGRGFTLREIRAAGLNPVFARTIGIAVXPRRRNKSVESLQINVQRIKEYRARLI 418
K++ GRGF++ EI+A L AR +GI V RR++ + + NV+ ++EY ++++
Sbjct: 17 KMKQGRGFSISEIKAINLTVNEARLLGIPVDTRRKS----TWEWNVKALQEYVSKVV 69
>UniRef50_P58469 Cluster: 50S ribosomal protein L13e; n=1;
Sulfolobus tokodaii|Rep: 50S ribosomal protein L13e -
Sulfolobus tokodaii
Length = 77
Score = 37.5 bits (83), Expect = 0.26
Identities = 17/68 (25%), Positives = 42/68 (61%), Gaps = 3/68 (4%)
Frame = +2
Query: 206 LRPIVRCPTVRYHTK---VRAGRGFTLREIRAAGLNPVFARTIGIAVXPRRRNKSVESLQ 376
+ PIV+ P R+ + + G+GF+L+E++ +G + A+ + + + RR+ E+++
Sbjct: 2 VEPIVKRPHYRFEIRKKDTKIGKGFSLKELKESGFSVQEAKKLRVRIDKRRKTSYPENVE 61
Query: 377 INVQRIKE 400
+ ++++KE
Sbjct: 62 V-LKKLKE 68
>UniRef50_Q97W05 Cluster: 50S ribosomal protein L13e; n=2;
Sulfolobus solfataricus|Rep: 50S ribosomal protein L13e
- Sulfolobus solfataricus
Length = 79
Score = 37.5 bits (83), Expect = 0.26
Identities = 24/54 (44%), Positives = 34/54 (62%)
Frame = +2
Query: 254 RAGRGFTLREIRAAGLNPVFARTIGIAVXPRRRNKSVESLQINVQRIKEYRARL 415
R GRGF++ E+ AGLN AR +GI V RR KSV + NV+ +K++ +L
Sbjct: 25 RIGRGFSVGELEKAGLNINKARKLGIFVDIRR--KSVH--EENVETLKKFSEQL 74
>UniRef50_A1RY56 Cluster: 60S ribosomal protein L13; n=1;
Thermofilum pendens Hrk 5|Rep: 60S ribosomal protein L13
- Thermofilum pendens (strain Hrk 5)
Length = 157
Score = 36.7 bits (81), Expect = 0.46
Identities = 20/54 (37%), Positives = 35/54 (64%), Gaps = 3/54 (5%)
Frame = +2
Query: 251 VRAGRGFTLREIRAAGLNPVFARTIGIAVXPRRRN---KSVESLQINVQRIKEY 403
++ GRGF+ E++A GL AR +GI V RR+ ++VE+L+ ++ +KE+
Sbjct: 30 LKVGRGFSEGEVKALGLTVKEARLLGIYVDERRKTVHPENVEALRSWLKALKEH 83
>UniRef50_UPI0000E49D21 Cluster: PREDICTED: similar to LOC495497
protein; n=3; Strongylocentrotus purpuratus|Rep:
PREDICTED: similar to LOC495497 protein -
Strongylocentrotus purpuratus
Length = 802
Score = 34.3 bits (75), Expect = 2.5
Identities = 24/77 (31%), Positives = 35/77 (45%), Gaps = 2/77 (2%)
Frame = -2
Query: 298 SCGPNFTKSESSTGAYFSMVPNSWASHYRT*RPS-CRTWSYGLSFLYXILLSAVSSSWLV 122
SC P+ T S ST + P +H+ T P C WS+ SF Y A L
Sbjct: 367 SCPPSSTSS--STSSKQETPPCPVDNHFETGPPEKCHKWSFIFSFTYLAFFRAAGYFGLE 424
Query: 121 KP-SFNKSLPILVEMSI 74
KP SF+ + +L+ + +
Sbjct: 425 KPTSFSNVVQLLLTLKL 441
>UniRef50_A6T0S2 Cluster: Mechanosensitive ion channel protein; n=1;
Janthinobacterium sp. Marseille|Rep: Mechanosensitive
ion channel protein - Janthinobacterium sp. (strain
Marseille) (Minibacterium massiliensis)
Length = 284
Score = 33.9 bits (74), Expect = 3.3
Identities = 22/76 (28%), Positives = 37/76 (48%), Gaps = 5/76 (6%)
Frame = +2
Query: 266 GFTLREIRA---AGLNPVFART--IGIAVXPRRRNKSVESLQINVQRIKEYRARLILFPK 430
GF L+++ + +GL + A+T IG + +VE +QI I+ Y RL+L P
Sbjct: 107 GFALKDVLSNLVSGLFILIAQTFEIGDQIVVGETEGTVERIQIRATHIRTYDGRLVLVPN 166
Query: 431 GKKVLXGEANEXXRKL 478
G+ + N +L
Sbjct: 167 GEVFMSRVTNNTASEL 182
>UniRef50_Q9LTC0 Cluster: Protein serine/threonine kinase-like;
n=10; Magnoliophyta|Rep: Protein serine/threonine
kinase-like - Arabidopsis thaliana (Mouse-ear cress)
Length = 410
Score = 33.1 bits (72), Expect = 5.7
Identities = 16/52 (30%), Positives = 25/52 (48%)
Frame = +2
Query: 428 KGKKVLXGEANEXXRKLATQLRGPLMPVQQPAPKSVARPITEXEKNFKAYQY 583
KGK++L A E + T P P+P+S+ TE E+N + + Y
Sbjct: 25 KGKELLQNSAPELTNRSETSSFNLQTPRSLPSPRSIKDLYTEREQNLRVFSY 76
>UniRef50_UPI00015BAF4C Cluster: LSU ribosomal protein L13E; n=1;
Ignicoccus hospitalis KIN4/I|Rep: LSU ribosomal protein
L13E - Ignicoccus hospitalis KIN4/I
Length = 96
Score = 32.3 bits (70), Expect = 10.0
Identities = 23/66 (34%), Positives = 38/66 (57%)
Frame = +2
Query: 206 LRPIVRCPTVRYHTKVRAGRGFTLREIRAAGLNPVFARTIGIAVXPRRRNKSVESLQINV 385
L P++R + K+R GRGF+ E+ A GL+ A +GI + RR K+V + NV
Sbjct: 29 LTPVLRKDAGK-KPKMRRGRGFSKGELEAVGLDFKKALKMGIPIDKRR--KTVH--EWNV 83
Query: 386 QRIKEY 403
+ +K++
Sbjct: 84 EALKKW 89
>UniRef50_Q6RKJ4 Cluster: Polyketide synthase; n=4;
Sclerotiniaceae|Rep: Polyketide synthase - Botrytis
cinerea (Noble rot fungus) (Botryotinia fuckeliana)
Length = 2511
Score = 32.3 bits (70), Expect = 10.0
Identities = 28/94 (29%), Positives = 44/94 (46%), Gaps = 3/94 (3%)
Frame = -3
Query: 423 NSIRRALYSFIL*TLICNDSTDLLRLRGXTAIPIVRANTGFNPAALISRRVNPLPARTLV 244
+SI +A +S L T + DLL+L G T +V ++G AA + R+ A +
Sbjct: 604 SSIEKAEFSQPLCTALQIALVDLLKLIGVTFSAVVGHSSGEIGAAYAAGRLTAGDAIRIA 663
Query: 243 WYRTV-GHRTIGRNGPAAGRGATALAF--FIXFC 151
+YR + H G+ G A L+F + FC
Sbjct: 664 YYRGLHAHLAKGKGGEEGSMMAAGLSFDEALEFC 697
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 609,163,984
Number of Sequences: 1657284
Number of extensions: 11572163
Number of successful extensions: 27696
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 26932
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27669
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 46881492319
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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