Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP02_F_N24
         (585 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC062716-1|AAH62716.1|  140|Homo sapiens ribosomal protein L23 p...   157   2e-38
X55954-1|CAA39417.1|  140|Homo sapiens HL23 ribosomal protein pr...   157   3e-38
X52839-1|CAA37023.1|  140|Homo sapiens ribosomal protein L17 pro...   157   3e-38
BC106061-1|AAI06062.1|  140|Homo sapiens RPL23 protein protein.       157   3e-38
BC104651-1|AAI04652.1|  140|Homo sapiens ribosomal protein L23 p...   157   3e-38
BC010114-1|AAH10114.1|  140|Homo sapiens ribosomal protein L23 p...   157   3e-38
BC003518-1|AAH03518.1|  134|Homo sapiens Similar to ribosomal pr...   157   3e-38
AB061827-1|BAB79465.1|  140|Homo sapiens ribosomal protein L23 p...   157   3e-38
BC034378-1|AAH34378.1|   77|Homo sapiens RPL23 protein protein.        50   8e-06
BC103925-1|AAI03926.1|  523|Homo sapiens UDP glycosyltransferase...    33   0.56 
BC103924-1|AAI03925.1|  523|Homo sapiens UDP glycosyltransferase...    33   0.56 
AY358416-1|AAQ88782.1|  523|Homo sapiens glucuronosyltransferase...    33   0.56 
AK075383-1|BAC11583.1|  523|Homo sapiens protein ( Homo sapiens ...    33   0.56 
AY172136-1|AAO31738.1| 1906|Homo sapiens retinoic acid induced 1...    29   9.1  
AL834486-1|CAD39144.1|  568|Homo sapiens hypothetical protein pr...    29   9.1  
AL834468-1|CAD39127.1| 1285|Homo sapiens hypothetical protein pr...    29   9.1  
AB058723-1|BAB47449.1| 1644|Homo sapiens KIAA1820 protein protein.     29   9.1  

>BC062716-1|AAH62716.1|  140|Homo sapiens ribosomal protein L23
           protein.
          Length = 140

 Score =  157 bits (382), Expect = 2e-38
 Identities = 81/115 (70%), Positives = 90/115 (78%), Gaps = 4/115 (3%)
 Frame = +1

Query: 94  LGAVINCADNTGRKE----SVCDRSPRLSKVA*TDCRRPVPGHMIVATVKKGKPELRKKV 261
           +GAVINCADNTG K     SV     RL+++          G M++ATVKKGKPELRKKV
Sbjct: 22  VGAVINCADNTGAKNLYIISVKGIKGRLNRLPAAGV-----GDMVMATVKKGKPELRKKV 76

Query: 262 MPAVVIRQRKPFRRRDGXFIYFEDNAGVIVNNKGEMKGSAITGPVAKECADLWPR 426
            PAVVIRQRK +RR+DG F+YFEDNAGVIVNNKGEMKGSAITGPVAKECADLWPR
Sbjct: 77  RPAVVIRQRKSYRRKDGVFLYFEDNAGVIVNNKGEMKGSAITGPVAKECADLWPR 131


>X55954-1|CAA39417.1|  140|Homo sapiens HL23 ribosomal protein
           protein.
          Length = 140

 Score =  157 bits (381), Expect = 3e-38
 Identities = 81/115 (70%), Positives = 90/115 (78%), Gaps = 4/115 (3%)
 Frame = +1

Query: 94  LGAVINCADNTGRKE----SVCDRSPRLSKVA*TDCRRPVPGHMIVATVKKGKPELRKKV 261
           +GAVINCADNTG K     SV     RL+++          G M++ATVKKGKPELRKKV
Sbjct: 22  VGAVINCADNTGAKNLYIISVKGIKGRLNRLPAAGV-----GDMVMATVKKGKPELRKKV 76

Query: 262 MPAVVIRQRKPFRRRDGXFIYFEDNAGVIVNNKGEMKGSAITGPVAKECADLWPR 426
            PAVVIRQRK +RR+DG F+YFEDNAGVIVNNKGEMKGSAITGPVAKECADLWPR
Sbjct: 77  HPAVVIRQRKSYRRKDGVFLYFEDNAGVIVNNKGEMKGSAITGPVAKECADLWPR 131


>X52839-1|CAA37023.1|  140|Homo sapiens ribosomal protein L17
           protein.
          Length = 140

 Score =  157 bits (381), Expect = 3e-38
 Identities = 81/115 (70%), Positives = 90/115 (78%), Gaps = 4/115 (3%)
 Frame = +1

Query: 94  LGAVINCADNTGRKE----SVCDRSPRLSKVA*TDCRRPVPGHMIVATVKKGKPELRKKV 261
           +GAVINCADNTG K     SV     RL+++          G M++ATVKKGKPELRKKV
Sbjct: 22  VGAVINCADNTGAKNLYIISVKGIKGRLNRLPAAGV-----GDMVMATVKKGKPELRKKV 76

Query: 262 MPAVVIRQRKPFRRRDGXFIYFEDNAGVIVNNKGEMKGSAITGPVAKECADLWPR 426
            PAVVIRQRK +RR+DG F+YFEDNAGVIVNNKGEMKGSAITGPVAKECADLWPR
Sbjct: 77  HPAVVIRQRKSYRRKDGVFLYFEDNAGVIVNNKGEMKGSAITGPVAKECADLWPR 131


>BC106061-1|AAI06062.1|  140|Homo sapiens RPL23 protein protein.
          Length = 140

 Score =  157 bits (381), Expect = 3e-38
 Identities = 81/115 (70%), Positives = 90/115 (78%), Gaps = 4/115 (3%)
 Frame = +1

Query: 94  LGAVINCADNTGRKE----SVCDRSPRLSKVA*TDCRRPVPGHMIVATVKKGKPELRKKV 261
           +GAVINCADNTG K     SV     RL+++          G M++ATVKKGKPELRKKV
Sbjct: 22  VGAVINCADNTGAKNLYIISVKGIKGRLNRLPAAGV-----GDMVMATVKKGKPELRKKV 76

Query: 262 MPAVVIRQRKPFRRRDGXFIYFEDNAGVIVNNKGEMKGSAITGPVAKECADLWPR 426
            PAVVIRQRK +RR+DG F+YFEDNAGVIVNNKGEMKGSAITGPVAKECADLWPR
Sbjct: 77  HPAVVIRQRKSYRRKDGVFLYFEDNAGVIVNNKGEMKGSAITGPVAKECADLWPR 131


>BC104651-1|AAI04652.1|  140|Homo sapiens ribosomal protein L23
           protein.
          Length = 140

 Score =  157 bits (381), Expect = 3e-38
 Identities = 81/115 (70%), Positives = 90/115 (78%), Gaps = 4/115 (3%)
 Frame = +1

Query: 94  LGAVINCADNTGRKE----SVCDRSPRLSKVA*TDCRRPVPGHMIVATVKKGKPELRKKV 261
           +GAVINCADNTG K     SV     RL+++          G M++ATVKKGKPELRKKV
Sbjct: 22  VGAVINCADNTGAKNLYIISVKGIKGRLNRLPAAGV-----GDMVMATVKKGKPELRKKV 76

Query: 262 MPAVVIRQRKPFRRRDGXFIYFEDNAGVIVNNKGEMKGSAITGPVAKECADLWPR 426
            PAVVIRQRK +RR+DG F+YFEDNAGVIVNNKGEMKGSAITGPVAKECADLWPR
Sbjct: 77  HPAVVIRQRKSYRRKDGVFLYFEDNAGVIVNNKGEMKGSAITGPVAKECADLWPR 131


>BC010114-1|AAH10114.1|  140|Homo sapiens ribosomal protein L23
           protein.
          Length = 140

 Score =  157 bits (381), Expect = 3e-38
 Identities = 81/115 (70%), Positives = 90/115 (78%), Gaps = 4/115 (3%)
 Frame = +1

Query: 94  LGAVINCADNTGRKE----SVCDRSPRLSKVA*TDCRRPVPGHMIVATVKKGKPELRKKV 261
           +GAVINCADNTG K     SV     RL+++          G M++ATVKKGKPELRKKV
Sbjct: 22  VGAVINCADNTGAKNLYIISVKGIKGRLNRLPAAGV-----GDMVMATVKKGKPELRKKV 76

Query: 262 MPAVVIRQRKPFRRRDGXFIYFEDNAGVIVNNKGEMKGSAITGPVAKECADLWPR 426
            PAVVIRQRK +RR+DG F+YFEDNAGVIVNNKGEMKGSAITGPVAKECADLWPR
Sbjct: 77  HPAVVIRQRKSYRRKDGVFLYFEDNAGVIVNNKGEMKGSAITGPVAKECADLWPR 131


>BC003518-1|AAH03518.1|  134|Homo sapiens Similar to ribosomal
           protein L23 protein.
          Length = 134

 Score =  157 bits (381), Expect = 3e-38
 Identities = 81/115 (70%), Positives = 90/115 (78%), Gaps = 4/115 (3%)
 Frame = +1

Query: 94  LGAVINCADNTGRKE----SVCDRSPRLSKVA*TDCRRPVPGHMIVATVKKGKPELRKKV 261
           +GAVINCADNTG K     SV     RL+++          G M++ATVKKGKPELRKKV
Sbjct: 16  VGAVINCADNTGAKNLYIISVKGIKGRLNRLPAAGV-----GDMVMATVKKGKPELRKKV 70

Query: 262 MPAVVIRQRKPFRRRDGXFIYFEDNAGVIVNNKGEMKGSAITGPVAKECADLWPR 426
            PAVVIRQRK +RR+DG F+YFEDNAGVIVNNKGEMKGSAITGPVAKECADLWPR
Sbjct: 71  HPAVVIRQRKSYRRKDGVFLYFEDNAGVIVNNKGEMKGSAITGPVAKECADLWPR 125


>AB061827-1|BAB79465.1|  140|Homo sapiens ribosomal protein L23
           protein.
          Length = 140

 Score =  157 bits (381), Expect = 3e-38
 Identities = 81/115 (70%), Positives = 90/115 (78%), Gaps = 4/115 (3%)
 Frame = +1

Query: 94  LGAVINCADNTGRKE----SVCDRSPRLSKVA*TDCRRPVPGHMIVATVKKGKPELRKKV 261
           +GAVINCADNTG K     SV     RL+++          G M++ATVKKGKPELRKKV
Sbjct: 22  VGAVINCADNTGAKNLYIISVKGIKGRLNRLPAAGV-----GDMVMATVKKGKPELRKKV 76

Query: 262 MPAVVIRQRKPFRRRDGXFIYFEDNAGVIVNNKGEMKGSAITGPVAKECADLWPR 426
            PAVVIRQRK +RR+DG F+YFEDNAGVIVNNKGEMKGSAITGPVAKECADLWPR
Sbjct: 77  HPAVVIRQRKSYRRKDGVFLYFEDNAGVIVNNKGEMKGSAITGPVAKECADLWPR 131


>BC034378-1|AAH34378.1|   77|Homo sapiens RPL23 protein protein.
          Length = 77

 Score = 49.6 bits (113), Expect = 8e-06
 Identities = 31/59 (52%), Positives = 37/59 (62%), Gaps = 4/59 (6%)
 Frame = +1

Query: 94  LGAVINCADNTGRKE----SVCDRSPRLSKVA*TDCRRPVPGHMIVATVKKGKPELRKK 258
           +GAVINCADNTG K     SV     RL+++          G M++ATVKKGKPELRKK
Sbjct: 22  VGAVINCADNTGAKNLYIISVKGIKGRLNRLPAAGV-----GDMVMATVKKGKPELRKK 75


>BC103925-1|AAI03926.1|  523|Homo sapiens UDP glycosyltransferase 3
           family, polypeptide A2 protein.
          Length = 523

 Score = 33.5 bits (73), Expect = 0.56
 Identities = 21/59 (35%), Positives = 28/59 (47%)
 Frame = -2

Query: 194 RRQSVQATFDSLGLRSHTDSLRPVLSAQLITAPSWETQGDTGISLPXEPPRPLLDILLY 18
           R+Q +Q+TFD+      T+  RPVLS  L+ A  W    D          RPLL   +Y
Sbjct: 213 RQQHMQSTFDNTIKEHFTEGSRPVLSHLLLKAELWFINSDFAFDF----ARPLLPNTVY 267


>BC103924-1|AAI03925.1|  523|Homo sapiens UDP glycosyltransferase 3
           family, polypeptide A2 protein.
          Length = 523

 Score = 33.5 bits (73), Expect = 0.56
 Identities = 21/59 (35%), Positives = 28/59 (47%)
 Frame = -2

Query: 194 RRQSVQATFDSLGLRSHTDSLRPVLSAQLITAPSWETQGDTGISLPXEPPRPLLDILLY 18
           R+Q +Q+TFD+      T+  RPVLS  L+ A  W    D          RPLL   +Y
Sbjct: 213 RQQHMQSTFDNTIKEHFTEGSRPVLSHLLLKAELWFINSDFAFDF----ARPLLPNTVY 267


>AY358416-1|AAQ88782.1|  523|Homo sapiens glucuronosyltransferase
           protein.
          Length = 523

 Score = 33.5 bits (73), Expect = 0.56
 Identities = 21/59 (35%), Positives = 28/59 (47%)
 Frame = -2

Query: 194 RRQSVQATFDSLGLRSHTDSLRPVLSAQLITAPSWETQGDTGISLPXEPPRPLLDILLY 18
           R+Q +Q+TFD+      T+  RPVLS  L+ A  W    D          RPLL   +Y
Sbjct: 213 RQQHMQSTFDNTIKEHFTEGSRPVLSHLLLKAELWFINSDFAFDF----ARPLLPNTVY 267


>AK075383-1|BAC11583.1|  523|Homo sapiens protein ( Homo sapiens
           cDNA PSEC0073 fis, clone NT2RP2002934, weakly similar to
           UDP-GLUCURONOSYLTRANSFERASE 2C1 MICROSOMAL (EC
           2.4.1.17). ).
          Length = 523

 Score = 33.5 bits (73), Expect = 0.56
 Identities = 21/59 (35%), Positives = 28/59 (47%)
 Frame = -2

Query: 194 RRQSVQATFDSLGLRSHTDSLRPVLSAQLITAPSWETQGDTGISLPXEPPRPLLDILLY 18
           R+Q +Q+TFD+      T+  RPVLS  L+ A  W    D          RPLL   +Y
Sbjct: 213 RQQHMQSTFDNTIKEHFTEGSRPVLSHLLLKAELWFINSDFAFDF----ARPLLPNTVY 267


>AY172136-1|AAO31738.1| 1906|Homo sapiens retinoic acid induced 1
            protein.
          Length = 1906

 Score = 29.5 bits (63), Expect = 9.1
 Identities = 12/29 (41%), Positives = 18/29 (62%)
 Frame = -2

Query: 425  RGHRSAHSLATGPVMAEPFISPLLLTMTP 339
            +G   AH L+ GP+   P++ P LL +TP
Sbjct: 1450 KGRAGAHGLSKGPLEKRPYLGPALL-LTP 1477


>AL834486-1|CAD39144.1|  568|Homo sapiens hypothetical protein
           protein.
          Length = 568

 Score = 29.5 bits (63), Expect = 9.1
 Identities = 12/29 (41%), Positives = 18/29 (62%)
 Frame = -2

Query: 425 RGHRSAHSLATGPVMAEPFISPLLLTMTP 339
           +G   AH L+ GP+   P++ P LL +TP
Sbjct: 112 KGRAGAHGLSKGPLEKRPYLGPALL-LTP 139


>AL834468-1|CAD39127.1| 1285|Homo sapiens hypothetical protein
           protein.
          Length = 1285

 Score = 29.5 bits (63), Expect = 9.1
 Identities = 12/29 (41%), Positives = 18/29 (62%)
 Frame = -2

Query: 425 RGHRSAHSLATGPVMAEPFISPLLLTMTP 339
           +G   AH L+ GP+   P++ P LL +TP
Sbjct: 829 KGRAGAHGLSKGPLEKRPYLGPALL-LTP 856


>AB058723-1|BAB47449.1| 1644|Homo sapiens KIAA1820 protein protein.
          Length = 1644

 Score = 29.5 bits (63), Expect = 9.1
 Identities = 12/29 (41%), Positives = 18/29 (62%)
 Frame = -2

Query: 425  RGHRSAHSLATGPVMAEPFISPLLLTMTP 339
            +G   AH L+ GP+   P++ P LL +TP
Sbjct: 1454 KGRAGAHGLSKGPLEKRPYLGPALL-LTP 1481


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 81,657,070
Number of Sequences: 237096
Number of extensions: 1787191
Number of successful extensions: 3271
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 3107
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3244
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 6098631048
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)