Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP02_F_N24
(585 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AE013599-3487|AAF46914.1| 140|Drosophila melanogaster CG3661-PA... 163 1e-40
M85295-1|AAA28867.1| 140|Drosophila melanogaster ribosomal prot... 149 3e-36
Z11527-1|CAA77616.1| 614|Drosophila melanogaster CYS3HIS finger... 29 6.1
BT021256-1|AAX33404.1| 608|Drosophila melanogaster RE58038p pro... 29 6.1
AF175223-1|AAD52614.1| 3469|Drosophila melanogaster SANT domain ... 29 6.1
AE014298-1804|AAF48196.2| 3604|Drosophila melanogaster CG4013-PC... 29 6.1
AE014298-1803|AAN09315.1| 3604|Drosophila melanogaster CG4013-PB... 29 6.1
AE014298-1802|AAF48195.2| 3604|Drosophila melanogaster CG4013-PA... 29 6.1
AE014297-3282|AAO41594.1| 599|Drosophila melanogaster CG4620-PB... 29 6.1
AE014297-3281|AAO41593.1| 599|Drosophila melanogaster CG4620-PA... 29 6.1
>AE013599-3487|AAF46914.1| 140|Drosophila melanogaster CG3661-PA
protein.
Length = 140
Score = 163 bits (397), Expect = 1e-40
Identities = 85/115 (73%), Positives = 91/115 (79%), Gaps = 4/115 (3%)
Frame = +1
Query: 94 LGAVINCADNTGRKE----SVCDRSPRLSKVA*TDCRRPVPGHMIVATVKKGKPELRKKV 261
+GAV+NCADNTG K +V RL+++ G M VATVKKGKPELRKKV
Sbjct: 22 VGAVMNCADNTGAKNLYVIAVHGIRGRLNRLPAAGV-----GDMFVATVKKGKPELRKKV 76
Query: 262 MPAVVIRQRKPFRRRDGXFIYFEDNAGVIVNNKGEMKGSAITGPVAKECADLWPR 426
MPAVVIRQRKPFRRRDG FIYFEDNAGVIVNNKGEMKGSAITGPVAKECADLWPR
Sbjct: 77 MPAVVIRQRKPFRRRDGVFIYFEDNAGVIVNNKGEMKGSAITGPVAKECADLWPR 131
>M85295-1|AAA28867.1| 140|Drosophila melanogaster ribosomal protein
L17A protein.
Length = 140
Score = 149 bits (361), Expect = 3e-36
Identities = 79/115 (68%), Positives = 85/115 (73%), Gaps = 4/115 (3%)
Frame = +1
Query: 94 LGAVINCADNTGRKE----SVCDRSPRLSKVA*TDCRRPVPGHMIVATVKKGKPELRKKV 261
+GAV+NCADNTG K +V RL+++ G M VATVKKGKPELRKKV
Sbjct: 22 VGAVMNCADNTGAKNLYVIAVHGIRGRLNRLPAAGV-----GDMFVATVKKGKPELRKKV 76
Query: 262 MPAVVIRQRKPFRRRDGXFIYFEDNAGVIVNNKGEMKGSAITGPVAKECADLWPR 426
RQRKPFRRRDG FIYFEDNAGVIVNNKGEMKGSAITGPVAKECADLWPR
Sbjct: 77 SVVPSARQRKPFRRRDGVFIYFEDNAGVIVNNKGEMKGSAITGPVAKECADLWPR 131
>Z11527-1|CAA77616.1| 614|Drosophila melanogaster CYS3HIS finger
protein protein.
Length = 614
Score = 28.7 bits (61), Expect = 6.1
Identities = 11/19 (57%), Positives = 14/19 (73%)
Frame = +1
Query: 280 RQRKPFRRRDGXFIYFEDN 336
R+R+P R+RDG F Y DN
Sbjct: 72 RRRRPVRKRDGTFNYSADN 90
>BT021256-1|AAX33404.1| 608|Drosophila melanogaster RE58038p
protein.
Length = 608
Score = 28.7 bits (61), Expect = 6.1
Identities = 11/19 (57%), Positives = 14/19 (73%)
Frame = +1
Query: 280 RQRKPFRRRDGXFIYFEDN 336
R+R+P R+RDG F Y DN
Sbjct: 66 RRRRPVRKRDGTFNYSADN 84
>AF175223-1|AAD52614.1| 3469|Drosophila melanogaster SANT domain
protein SMRTER protein.
Length = 3469
Score = 28.7 bits (61), Expect = 6.1
Identities = 17/56 (30%), Positives = 26/56 (46%)
Frame = +3
Query: 108 QLRRQHRAQRICM*SQSKAIKGRLNRLPAAGSGAHDCGHSQKG*T*TPEKGNAGSG 275
Q ++QH AQ+ Q + ++P GSG+ G Q G + P G G+G
Sbjct: 3074 QHQQQHHAQQQQQQQQQHHAQQHHPQMPGTGSGSAPGGAGQGGGSGGPGSGGGGAG 3129
>AE014298-1804|AAF48196.2| 3604|Drosophila melanogaster CG4013-PC,
isoform C protein.
Length = 3604
Score = 28.7 bits (61), Expect = 6.1
Identities = 17/56 (30%), Positives = 26/56 (46%)
Frame = +3
Query: 108 QLRRQHRAQRICM*SQSKAIKGRLNRLPAAGSGAHDCGHSQKG*T*TPEKGNAGSG 275
Q ++QH AQ+ Q + ++P GSG+ G Q G + P G G+G
Sbjct: 3209 QHQQQHHAQQQQQQQQQHHAQQHHPQMPGTGSGSAPGGAGQGGGSGGPGSGGGGAG 3264
>AE014298-1803|AAN09315.1| 3604|Drosophila melanogaster CG4013-PB,
isoform B protein.
Length = 3604
Score = 28.7 bits (61), Expect = 6.1
Identities = 17/56 (30%), Positives = 26/56 (46%)
Frame = +3
Query: 108 QLRRQHRAQRICM*SQSKAIKGRLNRLPAAGSGAHDCGHSQKG*T*TPEKGNAGSG 275
Q ++QH AQ+ Q + ++P GSG+ G Q G + P G G+G
Sbjct: 3209 QHQQQHHAQQQQQQQQQHHAQQHHPQMPGTGSGSAPGGAGQGGGSGGPGSGGGGAG 3264
>AE014298-1802|AAF48195.2| 3604|Drosophila melanogaster CG4013-PA,
isoform A protein.
Length = 3604
Score = 28.7 bits (61), Expect = 6.1
Identities = 17/56 (30%), Positives = 26/56 (46%)
Frame = +3
Query: 108 QLRRQHRAQRICM*SQSKAIKGRLNRLPAAGSGAHDCGHSQKG*T*TPEKGNAGSG 275
Q ++QH AQ+ Q + ++P GSG+ G Q G + P G G+G
Sbjct: 3209 QHQQQHHAQQQQQQQQQHHAQQHHPQMPGTGSGSAPGGAGQGGGSGGPGSGGGGAG 3264
>AE014297-3282|AAO41594.1| 599|Drosophila melanogaster CG4620-PB,
isoform B protein.
Length = 599
Score = 28.7 bits (61), Expect = 6.1
Identities = 11/19 (57%), Positives = 14/19 (73%)
Frame = +1
Query: 280 RQRKPFRRRDGXFIYFEDN 336
R+R+P R+RDG F Y DN
Sbjct: 57 RRRRPVRKRDGTFNYSADN 75
>AE014297-3281|AAO41593.1| 599|Drosophila melanogaster CG4620-PA,
isoform A protein.
Length = 599
Score = 28.7 bits (61), Expect = 6.1
Identities = 11/19 (57%), Positives = 14/19 (73%)
Frame = +1
Query: 280 RQRKPFRRRDGXFIYFEDN 336
R+R+P R+RDG F Y DN
Sbjct: 57 RRRRPVRKRDGTFNYSADN 75
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,432,932
Number of Sequences: 53049
Number of extensions: 559418
Number of successful extensions: 1550
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1482
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1544
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2338128087
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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