Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP02_F_N19
(540 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X79239-1|CAA55821.1| 151|Homo sapiens ribosomal protein S13 pro... 125 9e-29
L01124-1|AAA60283.1| 151|Homo sapiens ribosomal protein S13 pro... 125 9e-29
D88010-1|BAA13528.1| 151|Homo sapiens ribosomal protein S13 pro... 125 9e-29
BC100032-1|AAI00033.1| 151|Homo sapiens ribosomal protein S13 p... 125 9e-29
BC066322-1|AAH66322.1| 151|Homo sapiens ribosomal protein S13 p... 125 9e-29
BC029732-1|AAH29732.1| 151|Homo sapiens ribosomal protein S13 p... 125 9e-29
BC006772-1|AAH06772.1| 151|Homo sapiens ribosomal protein S13 p... 125 9e-29
BC000475-1|AAH00475.1| 151|Homo sapiens ribosomal protein S13 p... 125 9e-29
L05090-1|AAC15854.1| 116|Homo sapiens ribosomal protein S13 pro... 94 3e-19
Z95115-4|CAB08268.1| 252|Homo sapiens crystallin, beta B1 protein. 30 6.0
U35340-1|AAC50383.1| 252|Homo sapiens beta B1-crystallin protein. 30 6.0
CR456425-1|CAG30311.1| 252|Homo sapiens CRYBB1 protein. 30 6.0
BC036790-1|AAH36790.1| 252|Homo sapiens crystallin, beta B1 pro... 30 6.0
>X79239-1|CAA55821.1| 151|Homo sapiens ribosomal protein S13
protein.
Length = 151
Score = 125 bits (302), Expect = 9e-29
Identities = 73/146 (50%), Positives = 90/146 (61%), Gaps = 1/146 (0%)
Frame = +3
Query: 84 GKGISQSALPYXRRCP-YLR*N*LPTM*RNKFTNLERRVSLPHKLV*C*GIHMELPK*DS 260
GKG+SQSALPY R P +L+ + + L ++ P ++ + +
Sbjct: 8 GKGLSQSALPYRRSVPTWLKLTSDDV--KEQIYKLAKKGLTPSQIGVILRDSHGVAQVRF 65
Query: 261 *LAKRSSAIMKAMGLAPDLPEDLYYLIKKAVAMRKHLERNRKDKDSKFXXXXXXXXXXXX 440
+ I+K+ GLAPDLPEDLY+LIKKAVA+RKHLERNRKDKD+KF
Sbjct: 66 VTGNKILRILKSKGLAPDLPEDLYHLIKKAVAVRKHLERNRKDKDAKFRLILIESRIHRL 125
Query: 441 ARYYKTXSVLPPNWKYESSTASALVA 518
ARYYKT VLPPNWKYESSTASALVA
Sbjct: 126 ARYYKTKRVLPPNWKYESSTASALVA 151
Score = 106 bits (254), Expect = 6e-23
Identities = 57/75 (76%), Positives = 62/75 (82%), Gaps = 1/75 (1%)
Frame = +2
Query: 62 MGRMHAPG*GYLPVGAALXPQVSLPA-LKLTADDVKEQIYKLGKKGLTPSQIGVMLRDSH 238
MGRMHAPG G +AL + S+P LKLT+DDVKEQIYKL KKGLTPSQIGV+LRDSH
Sbjct: 1 MGRMHAPGKGLSQ--SALPYRRSVPTWLKLTSDDVKEQIYKLAKKGLTPSQIGVILRDSH 58
Query: 239 GVAQVRFVTGKKILR 283
GVAQVRFVTG KILR
Sbjct: 59 GVAQVRFVTGNKILR 73
>L01124-1|AAA60283.1| 151|Homo sapiens ribosomal protein S13
protein.
Length = 151
Score = 125 bits (302), Expect = 9e-29
Identities = 73/146 (50%), Positives = 90/146 (61%), Gaps = 1/146 (0%)
Frame = +3
Query: 84 GKGISQSALPYXRRCP-YLR*N*LPTM*RNKFTNLERRVSLPHKLV*C*GIHMELPK*DS 260
GKG+SQSALPY R P +L+ + + L ++ P ++ + +
Sbjct: 8 GKGLSQSALPYRRSVPTWLKLTSDDV--KEQIYKLAKKGLTPSQIGVILRDSHGVAQVRF 65
Query: 261 *LAKRSSAIMKAMGLAPDLPEDLYYLIKKAVAMRKHLERNRKDKDSKFXXXXXXXXXXXX 440
+ I+K+ GLAPDLPEDLY+LIKKAVA+RKHLERNRKDKD+KF
Sbjct: 66 VTGNKILRILKSKGLAPDLPEDLYHLIKKAVAVRKHLERNRKDKDAKFRLILIESRIHRL 125
Query: 441 ARYYKTXSVLPPNWKYESSTASALVA 518
ARYYKT VLPPNWKYESSTASALVA
Sbjct: 126 ARYYKTKRVLPPNWKYESSTASALVA 151
Score = 106 bits (254), Expect = 6e-23
Identities = 57/75 (76%), Positives = 62/75 (82%), Gaps = 1/75 (1%)
Frame = +2
Query: 62 MGRMHAPG*GYLPVGAALXPQVSLPA-LKLTADDVKEQIYKLGKKGLTPSQIGVMLRDSH 238
MGRMHAPG G +AL + S+P LKLT+DDVKEQIYKL KKGLTPSQIGV+LRDSH
Sbjct: 1 MGRMHAPGKGLSQ--SALPYRRSVPTWLKLTSDDVKEQIYKLAKKGLTPSQIGVILRDSH 58
Query: 239 GVAQVRFVTGKKILR 283
GVAQVRFVTG KILR
Sbjct: 59 GVAQVRFVTGNKILR 73
>D88010-1|BAA13528.1| 151|Homo sapiens ribosomal protein S13
protein.
Length = 151
Score = 125 bits (302), Expect = 9e-29
Identities = 73/146 (50%), Positives = 90/146 (61%), Gaps = 1/146 (0%)
Frame = +3
Query: 84 GKGISQSALPYXRRCP-YLR*N*LPTM*RNKFTNLERRVSLPHKLV*C*GIHMELPK*DS 260
GKG+SQSALPY R P +L+ + + L ++ P ++ + +
Sbjct: 8 GKGLSQSALPYRRSVPTWLKLTSDDV--KEQIYKLAKKGLTPSQIGVILRDSHGVAQVRF 65
Query: 261 *LAKRSSAIMKAMGLAPDLPEDLYYLIKKAVAMRKHLERNRKDKDSKFXXXXXXXXXXXX 440
+ I+K+ GLAPDLPEDLY+LIKKAVA+RKHLERNRKDKD+KF
Sbjct: 66 VTGNKILRILKSKGLAPDLPEDLYHLIKKAVAVRKHLERNRKDKDAKFRLILIESRIHRL 125
Query: 441 ARYYKTXSVLPPNWKYESSTASALVA 518
ARYYKT VLPPNWKYESSTASALVA
Sbjct: 126 ARYYKTKRVLPPNWKYESSTASALVA 151
Score = 106 bits (254), Expect = 6e-23
Identities = 57/75 (76%), Positives = 62/75 (82%), Gaps = 1/75 (1%)
Frame = +2
Query: 62 MGRMHAPG*GYLPVGAALXPQVSLPA-LKLTADDVKEQIYKLGKKGLTPSQIGVMLRDSH 238
MGRMHAPG G +AL + S+P LKLT+DDVKEQIYKL KKGLTPSQIGV+LRDSH
Sbjct: 1 MGRMHAPGKGLSQ--SALPYRRSVPTWLKLTSDDVKEQIYKLAKKGLTPSQIGVILRDSH 58
Query: 239 GVAQVRFVTGKKILR 283
GVAQVRFVTG KILR
Sbjct: 59 GVAQVRFVTGNKILR 73
>BC100032-1|AAI00033.1| 151|Homo sapiens ribosomal protein S13
protein.
Length = 151
Score = 125 bits (302), Expect = 9e-29
Identities = 73/146 (50%), Positives = 90/146 (61%), Gaps = 1/146 (0%)
Frame = +3
Query: 84 GKGISQSALPYXRRCP-YLR*N*LPTM*RNKFTNLERRVSLPHKLV*C*GIHMELPK*DS 260
GKG+SQSALPY R P +L+ + + L ++ P ++ + +
Sbjct: 8 GKGLSQSALPYRRSVPTWLKLTSDDV--KEQIYKLAKKGLTPSQIGVILRDSHGVAQVRF 65
Query: 261 *LAKRSSAIMKAMGLAPDLPEDLYYLIKKAVAMRKHLERNRKDKDSKFXXXXXXXXXXXX 440
+ I+K+ GLAPDLPEDLY+LIKKAVA+RKHLERNRKDKD+KF
Sbjct: 66 VTGNKILRILKSKGLAPDLPEDLYHLIKKAVAVRKHLERNRKDKDAKFRLILIESRIHRL 125
Query: 441 ARYYKTXSVLPPNWKYESSTASALVA 518
ARYYKT VLPPNWKYESSTASALVA
Sbjct: 126 ARYYKTKRVLPPNWKYESSTASALVA 151
Score = 106 bits (254), Expect = 6e-23
Identities = 57/75 (76%), Positives = 62/75 (82%), Gaps = 1/75 (1%)
Frame = +2
Query: 62 MGRMHAPG*GYLPVGAALXPQVSLPA-LKLTADDVKEQIYKLGKKGLTPSQIGVMLRDSH 238
MGRMHAPG G +AL + S+P LKLT+DDVKEQIYKL KKGLTPSQIGV+LRDSH
Sbjct: 1 MGRMHAPGKGLSQ--SALPYRRSVPTWLKLTSDDVKEQIYKLAKKGLTPSQIGVILRDSH 58
Query: 239 GVAQVRFVTGKKILR 283
GVAQVRFVTG KILR
Sbjct: 59 GVAQVRFVTGNKILR 73
>BC066322-1|AAH66322.1| 151|Homo sapiens ribosomal protein S13
protein.
Length = 151
Score = 125 bits (302), Expect = 9e-29
Identities = 73/146 (50%), Positives = 90/146 (61%), Gaps = 1/146 (0%)
Frame = +3
Query: 84 GKGISQSALPYXRRCP-YLR*N*LPTM*RNKFTNLERRVSLPHKLV*C*GIHMELPK*DS 260
GKG+SQSALPY R P +L+ + + L ++ P ++ + +
Sbjct: 8 GKGLSQSALPYRRSVPTWLKLTSDDV--KEQIYKLAKKGLTPSQIGVILRDSHGVAQVRF 65
Query: 261 *LAKRSSAIMKAMGLAPDLPEDLYYLIKKAVAMRKHLERNRKDKDSKFXXXXXXXXXXXX 440
+ I+K+ GLAPDLPEDLY+LIKKAVA+RKHLERNRKDKD+KF
Sbjct: 66 VTGNKILRILKSKGLAPDLPEDLYHLIKKAVAVRKHLERNRKDKDAKFRLILIESRIHRL 125
Query: 441 ARYYKTXSVLPPNWKYESSTASALVA 518
ARYYKT VLPPNWKYESSTASALVA
Sbjct: 126 ARYYKTKRVLPPNWKYESSTASALVA 151
Score = 106 bits (254), Expect = 6e-23
Identities = 57/75 (76%), Positives = 62/75 (82%), Gaps = 1/75 (1%)
Frame = +2
Query: 62 MGRMHAPG*GYLPVGAALXPQVSLPA-LKLTADDVKEQIYKLGKKGLTPSQIGVMLRDSH 238
MGRMHAPG G +AL + S+P LKLT+DDVKEQIYKL KKGLTPSQIGV+LRDSH
Sbjct: 1 MGRMHAPGKGLSQ--SALPYRRSVPTWLKLTSDDVKEQIYKLAKKGLTPSQIGVILRDSH 58
Query: 239 GVAQVRFVTGKKILR 283
GVAQVRFVTG KILR
Sbjct: 59 GVAQVRFVTGNKILR 73
>BC029732-1|AAH29732.1| 151|Homo sapiens ribosomal protein S13
protein.
Length = 151
Score = 125 bits (302), Expect = 9e-29
Identities = 73/146 (50%), Positives = 90/146 (61%), Gaps = 1/146 (0%)
Frame = +3
Query: 84 GKGISQSALPYXRRCP-YLR*N*LPTM*RNKFTNLERRVSLPHKLV*C*GIHMELPK*DS 260
GKG+SQSALPY R P +L+ + + L ++ P ++ + +
Sbjct: 8 GKGLSQSALPYRRSVPTWLKLTSDDV--KEQIYKLAKKGLTPSQIGVILRDSHGVAQVRF 65
Query: 261 *LAKRSSAIMKAMGLAPDLPEDLYYLIKKAVAMRKHLERNRKDKDSKFXXXXXXXXXXXX 440
+ I+K+ GLAPDLPEDLY+LIKKAVA+RKHLERNRKDKD+KF
Sbjct: 66 VTGNKILRILKSKGLAPDLPEDLYHLIKKAVAVRKHLERNRKDKDAKFRLILIESRIHRL 125
Query: 441 ARYYKTXSVLPPNWKYESSTASALVA 518
ARYYKT VLPPNWKYESSTASALVA
Sbjct: 126 ARYYKTKRVLPPNWKYESSTASALVA 151
Score = 106 bits (254), Expect = 6e-23
Identities = 57/75 (76%), Positives = 62/75 (82%), Gaps = 1/75 (1%)
Frame = +2
Query: 62 MGRMHAPG*GYLPVGAALXPQVSLPA-LKLTADDVKEQIYKLGKKGLTPSQIGVMLRDSH 238
MGRMHAPG G +AL + S+P LKLT+DDVKEQIYKL KKGLTPSQIGV+LRDSH
Sbjct: 1 MGRMHAPGKGLSQ--SALPYRRSVPTWLKLTSDDVKEQIYKLAKKGLTPSQIGVILRDSH 58
Query: 239 GVAQVRFVTGKKILR 283
GVAQVRFVTG KILR
Sbjct: 59 GVAQVRFVTGNKILR 73
>BC006772-1|AAH06772.1| 151|Homo sapiens ribosomal protein S13
protein.
Length = 151
Score = 125 bits (302), Expect = 9e-29
Identities = 73/146 (50%), Positives = 90/146 (61%), Gaps = 1/146 (0%)
Frame = +3
Query: 84 GKGISQSALPYXRRCP-YLR*N*LPTM*RNKFTNLERRVSLPHKLV*C*GIHMELPK*DS 260
GKG+SQSALPY R P +L+ + + L ++ P ++ + +
Sbjct: 8 GKGLSQSALPYRRSVPTWLKLTSDDV--KEQIYKLAKKGLTPSQIGVILRDSHGVAQVRF 65
Query: 261 *LAKRSSAIMKAMGLAPDLPEDLYYLIKKAVAMRKHLERNRKDKDSKFXXXXXXXXXXXX 440
+ I+K+ GLAPDLPEDLY+LIKKAVA+RKHLERNRKDKD+KF
Sbjct: 66 VTGNKILRILKSKGLAPDLPEDLYHLIKKAVAVRKHLERNRKDKDAKFRLILIESRIHRL 125
Query: 441 ARYYKTXSVLPPNWKYESSTASALVA 518
ARYYKT VLPPNWKYESSTASALVA
Sbjct: 126 ARYYKTKRVLPPNWKYESSTASALVA 151
Score = 106 bits (254), Expect = 6e-23
Identities = 57/75 (76%), Positives = 62/75 (82%), Gaps = 1/75 (1%)
Frame = +2
Query: 62 MGRMHAPG*GYLPVGAALXPQVSLPA-LKLTADDVKEQIYKLGKKGLTPSQIGVMLRDSH 238
MGRMHAPG G +AL + S+P LKLT+DDVKEQIYKL KKGLTPSQIGV+LRDSH
Sbjct: 1 MGRMHAPGKGLSQ--SALPYRRSVPTWLKLTSDDVKEQIYKLAKKGLTPSQIGVILRDSH 58
Query: 239 GVAQVRFVTGKKILR 283
GVAQVRFVTG KILR
Sbjct: 59 GVAQVRFVTGNKILR 73
>BC000475-1|AAH00475.1| 151|Homo sapiens ribosomal protein S13
protein.
Length = 151
Score = 125 bits (302), Expect = 9e-29
Identities = 73/146 (50%), Positives = 90/146 (61%), Gaps = 1/146 (0%)
Frame = +3
Query: 84 GKGISQSALPYXRRCP-YLR*N*LPTM*RNKFTNLERRVSLPHKLV*C*GIHMELPK*DS 260
GKG+SQSALPY R P +L+ + + L ++ P ++ + +
Sbjct: 8 GKGLSQSALPYRRSVPTWLKLTSDDV--KEQIYKLAKKGLTPSQIGVILRDSHGVAQVRF 65
Query: 261 *LAKRSSAIMKAMGLAPDLPEDLYYLIKKAVAMRKHLERNRKDKDSKFXXXXXXXXXXXX 440
+ I+K+ GLAPDLPEDLY+LIKKAVA+RKHLERNRKDKD+KF
Sbjct: 66 VTGNKILRILKSKGLAPDLPEDLYHLIKKAVAVRKHLERNRKDKDAKFRLILIESRIHRL 125
Query: 441 ARYYKTXSVLPPNWKYESSTASALVA 518
ARYYKT VLPPNWKYESSTASALVA
Sbjct: 126 ARYYKTKRVLPPNWKYESSTASALVA 151
Score = 106 bits (254), Expect = 6e-23
Identities = 57/75 (76%), Positives = 62/75 (82%), Gaps = 1/75 (1%)
Frame = +2
Query: 62 MGRMHAPG*GYLPVGAALXPQVSLPA-LKLTADDVKEQIYKLGKKGLTPSQIGVMLRDSH 238
MGRMHAPG G +AL + S+P LKLT+DDVKEQIYKL KKGLTPSQIGV+LRDSH
Sbjct: 1 MGRMHAPGKGLSQ--SALPYRRSVPTWLKLTSDDVKEQIYKLAKKGLTPSQIGVILRDSH 58
Query: 239 GVAQVRFVTGKKILR 283
GVAQVRFVTG KILR
Sbjct: 59 GVAQVRFVTGNKILR 73
>L05090-1|AAC15854.1| 116|Homo sapiens ribosomal protein S13
protein.
Length = 116
Score = 93.9 bits (223), Expect = 3e-19
Identities = 48/60 (80%), Positives = 53/60 (88%), Gaps = 1/60 (1%)
Frame = +2
Query: 107 AALXPQVSLPA-LKLTADDVKEQIYKLGKKGLTPSQIGVMLRDSHGVAQVRFVTGKKILR 283
+AL + S+P LKLT+DDVKEQIYKL KKGLTPSQIGV+LRDSHGVAQVRFVTG KILR
Sbjct: 3 SALPYRRSVPTWLKLTSDDVKEQIYKLAKKGLTPSQIGVILRDSHGVAQVRFVTGNKILR 62
Score = 73.7 bits (173), Expect = 4e-13
Identities = 33/40 (82%), Positives = 38/40 (95%)
Frame = +3
Query: 285 IMKAMGLAPDLPEDLYYLIKKAVAMRKHLERNRKDKDSKF 404
I+K+ GLA DLPEDLY+LIKKAVA+RKHLERNRKDKD+KF
Sbjct: 63 ILKSKGLASDLPEDLYHLIKKAVAVRKHLERNRKDKDAKF 102
>Z95115-4|CAB08268.1| 252|Homo sapiens crystallin, beta B1 protein.
Length = 252
Score = 29.9 bits (64), Expect = 6.0
Identities = 14/32 (43%), Positives = 16/32 (50%)
Frame = -1
Query: 159 SSAVNFNAGRDTCGXKAAPTGRYPYPGACIRP 64
S+ V N G DT G A P G P PG + P
Sbjct: 10 SATVAVNPGPDTKGKGAPPAGTSPSPGTTLAP 41
>U35340-1|AAC50383.1| 252|Homo sapiens beta B1-crystallin protein.
Length = 252
Score = 29.9 bits (64), Expect = 6.0
Identities = 14/32 (43%), Positives = 16/32 (50%)
Frame = -1
Query: 159 SSAVNFNAGRDTCGXKAAPTGRYPYPGACIRP 64
S+ V N G DT G A P G P PG + P
Sbjct: 10 SATVAVNPGPDTKGKGAPPAGTSPSPGTTLAP 41
>CR456425-1|CAG30311.1| 252|Homo sapiens CRYBB1 protein.
Length = 252
Score = 29.9 bits (64), Expect = 6.0
Identities = 14/32 (43%), Positives = 16/32 (50%)
Frame = -1
Query: 159 SSAVNFNAGRDTCGXKAAPTGRYPYPGACIRP 64
S+ V N G DT G A P G P PG + P
Sbjct: 10 SATVAVNPGPDTKGKGAPPAGTSPSPGTTLAP 41
>BC036790-1|AAH36790.1| 252|Homo sapiens crystallin, beta B1
protein.
Length = 252
Score = 29.9 bits (64), Expect = 6.0
Identities = 14/32 (43%), Positives = 16/32 (50%)
Frame = -1
Query: 159 SSAVNFNAGRDTCGXKAAPTGRYPYPGACIRP 64
S+ V N G DT G A P G P PG + P
Sbjct: 10 SATVAVNPGPDTKGKGAPPAGTSPSPGTTLAP 41
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 73,339,521
Number of Sequences: 237096
Number of extensions: 1505937
Number of successful extensions: 10701
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 10348
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10677
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5251598958
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -