Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP02_F_N18
(513 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P62244 Cluster: 40S ribosomal protein S15a; n=205; Euka... 192 5e-48
UniRef50_Q9LX88 Cluster: 40S ribosomal protein S15a-4; n=14; Mag... 175 5e-43
UniRef50_UPI0000608089 Cluster: PREDICTED: similar to Rps15a pro... 173 1e-42
UniRef50_UPI0001552BC3 Cluster: PREDICTED: similar to Rps15a pro... 168 6e-41
UniRef50_A6NIS3 Cluster: Uncharacterized protein ENSP00000348155... 165 7e-40
UniRef50_UPI0000D9C93A Cluster: PREDICTED: similar to ribosomal ... 154 1e-36
UniRef50_Q8U014 Cluster: 30S ribosomal protein S8P; n=24; Archae... 111 1e-23
UniRef50_Q9M0E0 Cluster: 40S ribosomal protein S15a-5; n=5; Magn... 110 2e-23
UniRef50_O05636 Cluster: 30S ribosomal protein S8P; n=12; Archae... 108 8e-23
UniRef50_Q8PV35 Cluster: 30S ribosomal protein S8P; n=14; Euryar... 107 1e-22
UniRef50_Q8SQL9 Cluster: 40S RIBOSOMAL PROTEIN S15A; n=1; Enceph... 104 1e-21
UniRef50_Q6L1B2 Cluster: 30S ribosomal protein S8P; n=4; Euryarc... 100 2e-20
UniRef50_O28369 Cluster: 30S ribosomal protein S8P; n=3; Euryarc... 100 2e-20
UniRef50_A7D102 Cluster: Ribosomal protein S8; n=1; Halorubrum l... 97 2e-19
UniRef50_A0RVY8 Cluster: 30S ribosomal protein S8P; n=3; Thermop... 92 6e-18
UniRef50_Q74NG1 Cluster: 30S ribosomal protein S8P; n=1; Nanoarc... 81 1e-14
UniRef50_Q01GJ6 Cluster: Ribosomal protein S15; n=1; Ostreococcu... 64 2e-09
UniRef50_UPI0000DA3D5D Cluster: PREDICTED: similar to ribosomal ... 52 8e-06
UniRef50_Q50304 Cluster: 30S ribosomal protein S8; n=7; Mollicut... 43 0.004
UniRef50_Q0JQL2 Cluster: Os01g0153200 protein; n=4; Oryza sativa... 42 0.006
UniRef50_UPI0000E1E986 Cluster: PREDICTED: hypothetical protein;... 40 0.044
UniRef50_Q2S3Q0 Cluster: 30S ribosomal protein S8; n=2; Sphingob... 40 0.044
UniRef50_Q8A490 Cluster: 30S ribosomal protein S8; n=15; Bacteri... 39 0.058
UniRef50_Q81VR6 Cluster: 30S ribosomal protein S8; n=96; cellula... 38 0.10
UniRef50_P46757 Cluster: Mitochondrial ribosomal protein S8; n=1... 38 0.18
UniRef50_Q7M8E6 Cluster: 30S ribosomal protein S8; n=26; Epsilon... 37 0.31
UniRef50_Q2GL45 Cluster: 30S ribosomal protein S8; n=8; Ricketts... 36 0.41
UniRef50_UPI000049945C Cluster: hypothetical protein 90.t00021; ... 36 0.54
UniRef50_Q6MJ26 Cluster: 30S ribosomal protein S8; n=1; Bdellovi... 36 0.54
UniRef50_Q62GL9 Cluster: 30S ribosomal protein S8; n=68; Bacteri... 35 0.95
UniRef50_Q7XYA5 Cluster: Ribosome protein S8; n=1; Griffithsia j... 34 1.7
UniRef50_Q6D8U4 Cluster: Putative uncharacterized protein; n=1; ... 33 2.9
UniRef50_Q2JIL4 Cluster: 30S ribosomal protein S8; n=93; cellula... 33 3.8
UniRef50_Q8XV26 Cluster: 30S ribosomal protein S8; n=18; Proteob... 33 5.0
UniRef50_Q9ZCR9 Cluster: 30S ribosomal protein S8; n=9; Ricketts... 32 6.7
UniRef50_A0LRR6 Cluster: Inner-membrane translocator; n=1; Acido... 32 8.8
UniRef50_A0G972 Cluster: Putative uncharacterized protein precur... 32 8.8
UniRef50_Q2YIA3 Cluster: Ribosomal protein S8; n=20; Halimeda|Re... 32 8.8
UniRef50_P56801 Cluster: Chloroplast 30S ribosomal protein S8; n... 32 8.8
>UniRef50_P62244 Cluster: 40S ribosomal protein S15a; n=205;
Eukaryota|Rep: 40S ribosomal protein S15a - Homo sapiens
(Human)
Length = 130
Score = 192 bits (467), Expect = 5e-48
Identities = 89/113 (78%), Positives = 98/113 (86%), Gaps = 1/113 (0%)
Frame = +3
Query: 117 KSEGKDKSSSGPASKVIVKFLTVMMKHGYIGEFEIVDDHRAGKIVVNLTGRLNKCGVISP 296
+ GK + P SKVIV+FLTVMMKHGYIGEFEI+DDHRAGKIVVNLTGRLNKCGVISP
Sbjct: 18 EKRGKRQVLIRPCSKVIVRFLTVMMKHGYIGEFEIIDDHRAGKIVVNLTGRLNKCGVISP 77
Query: 297 RFDVPINDIERW-TNLLPSRQFGYLVLTTSGGIMDHEXARRKHLGGKILGFFF 452
RFDV + D+E+W NLLPSRQFG++VLTTS GIMDHE ARRKH GGKILGFFF
Sbjct: 78 RFDVQLKDLEKWQNNLLPSRQFGFIVLTTSAGIMDHEEARRKHTGGKILGFFF 130
Score = 60.9 bits (141), Expect = 2e-08
Identities = 28/30 (93%), Positives = 30/30 (100%)
Frame = +2
Query: 65 MVRMNVLSDALKSIHNAEKRGKRQVLIRPC 154
MVRMNVL+DALKSI+NAEKRGKRQVLIRPC
Sbjct: 1 MVRMNVLADALKSINNAEKRGKRQVLIRPC 30
>UniRef50_Q9LX88 Cluster: 40S ribosomal protein S15a-4; n=14;
Magnoliophyta|Rep: 40S ribosomal protein S15a-4 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 130
Score = 175 bits (426), Expect = 5e-43
Identities = 81/113 (71%), Positives = 94/113 (83%), Gaps = 1/113 (0%)
Frame = +3
Query: 117 KSEGKDKSSSGPASKVIVKFLTVMMKHGYIGEFEIVDDHRAGKIVVNLTGRLNKCGVISP 296
+ GK + P+SKVI+KFL VM KHGYIGEFE VDDHR+GKIVV L GRLNKCGVISP
Sbjct: 18 EKRGKRQVMIRPSSKVIIKFLIVMQKHGYIGEFEYVDDHRSGKIVVELNGRLNKCGVISP 77
Query: 297 RFDVPINDIERWT-NLLPSRQFGYLVLTTSGGIMDHEXARRKHLGGKILGFFF 452
RFDV + +IE WT LLPSRQFG++VLTTS GIMDHE ARRK++GGK+LGFF+
Sbjct: 78 RFDVGVKEIEGWTARLLPSRQFGFIVLTTSAGIMDHEEARRKNVGGKVLGFFY 130
Score = 50.4 bits (115), Expect = 2e-05
Identities = 22/29 (75%), Positives = 28/29 (96%)
Frame = +2
Query: 65 MVRMNVLSDALKSIHNAEKRGKRQVLIRP 151
MVR++VL+D LKS++NAEKRGKRQV+IRP
Sbjct: 1 MVRISVLNDGLKSMYNAEKRGKRQVMIRP 29
>UniRef50_UPI0000608089 Cluster: PREDICTED: similar to Rps15a
protein; n=5; Amniota|Rep: PREDICTED: similar to Rps15a
protein - Mus musculus
Length = 253
Score = 173 bits (422), Expect = 1e-42
Identities = 82/113 (72%), Positives = 92/113 (81%), Gaps = 1/113 (0%)
Frame = +3
Query: 117 KSEGKDKSSSGPASKVIVKFLTVMMKHGYIGEFEIVDDHRAGKIVVNLTGRLNKCGVISP 296
+ GK + P SKVIV FLTVMMKHGY GEFEI+DDHR GKIVVNLTGRLNKCGVIS
Sbjct: 141 EKRGKRQVLIRPCSKVIVWFLTVMMKHGYTGEFEIIDDHRDGKIVVNLTGRLNKCGVISL 200
Query: 297 RFDVPINDIERW-TNLLPSRQFGYLVLTTSGGIMDHEXARRKHLGGKILGFFF 452
RFDV + D+++W NLLP RQFG++VLTT GI+DHE ARRKH GGKILGFFF
Sbjct: 201 RFDVQLKDLDKWQNNLLPLRQFGFIVLTTLAGIIDHEEARRKHTGGKILGFFF 253
Score = 60.9 bits (141), Expect = 2e-08
Identities = 28/30 (93%), Positives = 30/30 (100%)
Frame = +2
Query: 65 MVRMNVLSDALKSIHNAEKRGKRQVLIRPC 154
MVRMNVL+DALKSI+NAEKRGKRQVLIRPC
Sbjct: 124 MVRMNVLADALKSINNAEKRGKRQVLIRPC 153
>UniRef50_UPI0001552BC3 Cluster: PREDICTED: similar to Rps15a
protein; n=3; Mus musculus|Rep: PREDICTED: similar to
Rps15a protein - Mus musculus
Length = 239
Score = 168 bits (409), Expect = 6e-41
Identities = 76/99 (76%), Positives = 87/99 (87%), Gaps = 1/99 (1%)
Frame = +3
Query: 156 SKVIVKFLTVMMKHGYIGEFEIVDDHRAGKIVVNLTGRLNKCGVISPRFDVPINDIERW- 332
SK IV+FLTVMMKHGYI EFEI+DDHRAGK+VVNLTGRLNKCGVISPRFDV + D+E+W
Sbjct: 129 SKAIVRFLTVMMKHGYISEFEIIDDHRAGKMVVNLTGRLNKCGVISPRFDVQLKDLEKWQ 188
Query: 333 TNLLPSRQFGYLVLTTSGGIMDHEXARRKHLGGKILGFF 449
NLLP+RQFG++VLTT GIMD E R+KH GG+ILGFF
Sbjct: 189 NNLLPARQFGFIVLTTLAGIMDREEGRQKHTGGEILGFF 227
Score = 42.3 bits (95), Expect = 0.006
Identities = 21/32 (65%), Positives = 24/32 (75%)
Frame = +2
Query: 59 LAMVRMNVLSDALKSIHNAEKRGKRQVLIRPC 154
+ MV MNVL DALKS ++AEK GKRQ IR C
Sbjct: 97 VTMVEMNVLVDALKSTNSAEKGGKRQFPIRLC 128
>UniRef50_A6NIS3 Cluster: Uncharacterized protein ENSP00000348155;
n=33; Eukaryota|Rep: Uncharacterized protein
ENSP00000348155 - Homo sapiens (Human)
Length = 129
Score = 165 bits (400), Expect = 7e-40
Identities = 79/113 (69%), Positives = 90/113 (79%), Gaps = 1/113 (0%)
Frame = +3
Query: 117 KSEGKDKSSSGPASKVIVKFLTVMMKHGYIGEFEIVDDHRAGKIVVNLTGRLNKCGVISP 296
K GK + P S+VI++FLTVM KHGYIGEFEI DDHRAGK+VV LT RLNKCGVISP
Sbjct: 18 KKRGKRQVLLRPCSEVIIRFLTVM-KHGYIGEFEITDDHRAGKMVVYLTDRLNKCGVISP 76
Query: 297 RFDVPINDIERW-TNLLPSRQFGYLVLTTSGGIMDHEXARRKHLGGKILGFFF 452
RF V + D+E+W NLLPS QFG+++LTTS GI D E ARRKH GGKILGFFF
Sbjct: 77 RFHVQLKDLEKWQNNLLPSYQFGFIILTTSAGITDREEARRKHTGGKILGFFF 129
Score = 54.0 bits (124), Expect = 2e-06
Identities = 24/30 (80%), Positives = 28/30 (93%)
Frame = +2
Query: 65 MVRMNVLSDALKSIHNAEKRGKRQVLIRPC 154
MVR NVL+DALK I+NA+KRGKRQVL+RPC
Sbjct: 1 MVRTNVLADALKRINNAKKRGKRQVLLRPC 30
>UniRef50_UPI0000D9C93A Cluster: PREDICTED: similar to ribosomal
protein S15a; n=1; Macaca mulatta|Rep: PREDICTED:
similar to ribosomal protein S15a - Macaca mulatta
Length = 345
Score = 154 bits (374), Expect = 1e-36
Identities = 71/94 (75%), Positives = 81/94 (86%), Gaps = 1/94 (1%)
Frame = +3
Query: 156 SKVIVKFLTVMMKHGYIGEFEIVDDHRAGKIVVNLTGRLNKCGVISPRFDVPINDIERW- 332
SKVIV+FL+VMMKHGYIGEFEI+DDH AGKIVVNLTGRLNKCGVI+ RFDV D+E+W
Sbjct: 197 SKVIVRFLSVMMKHGYIGEFEIIDDHTAGKIVVNLTGRLNKCGVINTRFDVQPKDLEKWR 256
Query: 333 TNLLPSRQFGYLVLTTSGGIMDHEXARRKHLGGK 434
NL PS QFG++VLTTS GIMDHE AR+KH G +
Sbjct: 257 NNLFPSCQFGFIVLTTSAGIMDHEEARQKHTGSR 290
Score = 44.8 bits (101), Expect = 0.001
Identities = 21/23 (91%), Positives = 22/23 (95%)
Frame = +2
Query: 86 SDALKSIHNAEKRGKRQVLIRPC 154
SDALKSI+NAEKRGKRQVLIR C
Sbjct: 174 SDALKSINNAEKRGKRQVLIRLC 196
>UniRef50_Q8U014 Cluster: 30S ribosomal protein S8P; n=24;
Archaea|Rep: 30S ribosomal protein S8P - Pyrococcus
furiosus
Length = 130
Score = 111 bits (266), Expect = 1e-23
Identities = 51/110 (46%), Positives = 74/110 (67%), Gaps = 1/110 (0%)
Frame = +3
Query: 126 GKDKSSSGPASKVIVKFLTVMMKHGYIGEFEIVDDHRAGKIVVNLTGRLNKCGVISPRFD 305
GK + PASK+I + L VM K+GYIGEFE +DD RAG V L GR+NK G I PRF
Sbjct: 21 GKREVYIKPASKLIGEVLRVMQKYGYIGEFEFIDDGRAGVYRVQLLGRINKAGAIKPRFP 80
Query: 306 VPINDIERW-TNLLPSRQFGYLVLTTSGGIMDHEXARRKHLGGKILGFFF 452
V +++ E+W LP+ +FG L+++TS G+M H+ A K +GG+++ + +
Sbjct: 81 VKVSEFEKWEKRFLPAFEFGILIVSTSQGVMSHKEAIEKGIGGRLIAYVY 130
>UniRef50_Q9M0E0 Cluster: 40S ribosomal protein S15a-5; n=5;
Magnoliophyta|Rep: 40S ribosomal protein S15a-5 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 129
Score = 110 bits (264), Expect = 2e-23
Identities = 50/110 (45%), Positives = 75/110 (68%), Gaps = 1/110 (0%)
Frame = +3
Query: 126 GKDKSSSGPASKVIVKFLTVMMKHGYIGEFEIVDDHRAGKIVVNLTGRLNKCGVISPRFD 305
GK P S V+ FL +M + GYI F++ D HR G+I V+L GR+N C ++ R D
Sbjct: 20 GKASVELKPISTVMSSFLRIMKEKGYIKNFQVYDPHRVGRITVDLQGRVNDCKALTYRQD 79
Query: 306 VPINDIERWT-NLLPSRQFGYLVLTTSGGIMDHEXARRKHLGGKILGFFF 452
V +IE++T LP+RQ+GY+V+TT GI+DHE A ++++GG++LGFF+
Sbjct: 80 VRAKEIEKYTERTLPTRQWGYVVITTPDGILDHEEAIKRNVGGQVLGFFY 129
Score = 32.3 bits (70), Expect = 6.7
Identities = 13/24 (54%), Positives = 20/24 (83%)
Frame = +2
Query: 80 VLSDALKSIHNAEKRGKRQVLIRP 151
+L+DAL++I NAE+RGK V ++P
Sbjct: 5 ILNDALRTIVNAERRGKASVELKP 28
>UniRef50_O05636 Cluster: 30S ribosomal protein S8P; n=12;
Archaea|Rep: 30S ribosomal protein S8P - Sulfolobus
acidocaldarius
Length = 133
Score = 108 bits (259), Expect = 8e-23
Identities = 50/105 (47%), Positives = 70/105 (66%), Gaps = 4/105 (3%)
Frame = +3
Query: 150 PASKVIVKFLTVMMKHGYIGEFEIVDDHRAGKIVVNLTGRLNKCGVISPRFDVPINDIER 329
PASK+I+ L VM K GYIGEFE +DD RAGKI+V L GR+NKCG ISPR+ + N + R
Sbjct: 29 PASKLIISVLRVMQKEGYIGEFEYIDDGRAGKIIVQLLGRINKCGPISPRYPLDYNGLLR 88
Query: 330 WTN----LLPSRQFGYLVLTTSGGIMDHEXARRKHLGGKILGFFF 452
+ LPS++ G ++++T G+M H R+ +GG LG+ +
Sbjct: 89 LPDYIRKYLPSKEIGIIIISTPKGVMSHRDGIREKIGGVTLGYVY 133
>UniRef50_Q8PV35 Cluster: 30S ribosomal protein S8P; n=14;
Euryarchaeota|Rep: 30S ribosomal protein S8P -
Methanosarcina mazei (Methanosarcina frisia)
Length = 130
Score = 107 bits (257), Expect = 1e-22
Identities = 52/110 (47%), Positives = 66/110 (60%), Gaps = 1/110 (0%)
Frame = +3
Query: 126 GKDKSSSGPASKVIVKFLTVMMKHGYIGEFEIVDDHRAGKIVVNLTGRLNKCGVISPRFD 305
GK PASK I L VM GYIG+FE +DD +AG V L GR+NKCG I PR+
Sbjct: 21 GKSSCIVRPASKNIGNVLKVMQDLGYIGDFEFIDDGKAGIYSVTLVGRINKCGAIKPRYS 80
Query: 306 VPINDIERW-TNLLPSRQFGYLVLTTSGGIMDHEXARRKHLGGKILGFFF 452
V ERW LP++ FG L+LTTS G+M AR K +GG++L + +
Sbjct: 81 VGTGSFERWEKQFLPAKNFGALILTTSSGVMSQYEARDKKIGGQLLAYVY 130
>UniRef50_Q8SQL9 Cluster: 40S RIBOSOMAL PROTEIN S15A; n=1;
Encephalitozoon cuniculi|Rep: 40S RIBOSOMAL PROTEIN S15A
- Encephalitozoon cuniculi
Length = 128
Score = 104 bits (250), Expect = 1e-21
Identities = 46/94 (48%), Positives = 68/94 (72%), Gaps = 1/94 (1%)
Frame = +3
Query: 174 FLTVMMKHGYIGEFEIVDDHRAGKIVVNLTGRLNKCGVISPRFDVPINDIERW-TNLLPS 350
FL M++HGYI F + D R+GK +++L GRLN+CG ISP + V + IE + T LLP+
Sbjct: 35 FLLQMLRHGYISGFSYIHDKRSGKSIIDLNGRLNRCGAISPNYIVKRDGIEDFRTRLLPA 94
Query: 351 RQFGYLVLTTSGGIMDHEXARRKHLGGKILGFFF 452
RQFG+++ TS GI+DH+ +++GGKILG+F+
Sbjct: 95 RQFGHVLFNTSKGILDHKECLTENVGGKILGYFY 128
>UniRef50_Q6L1B2 Cluster: 30S ribosomal protein S8P; n=4;
Euryarchaeota|Rep: 30S ribosomal protein S8P -
Picrophilus torridus
Length = 129
Score = 100 bits (240), Expect = 2e-20
Identities = 47/110 (42%), Positives = 71/110 (64%), Gaps = 1/110 (0%)
Frame = +3
Query: 126 GKDKSSSGPASKVIVKFLTVMMKHGYIGEFEIVDDHRAGKIVVNLTGRLNKCGVISPRFD 305
GK + GPAS +I + L VM + YI FE++++ R GK V L+ +N CGVI PR
Sbjct: 20 GKSEVIIGPASVMIGRILKVMQDYNYIKSFEVIEEERGGKFRVELSDTINNCGVIKPRLS 79
Query: 306 VPINDIERW-TNLLPSRQFGYLVLTTSGGIMDHEXARRKHLGGKILGFFF 452
V ++IER+ + LP++ FG ++LTT+ GIM H AR+ +GGK+L + +
Sbjct: 80 VKNSNIERYESRYLPAQDFGIIILTTTKGIMSHIEARKLGIGGKLLAYVY 129
>UniRef50_O28369 Cluster: 30S ribosomal protein S8P; n=3;
Euryarchaeota|Rep: 30S ribosomal protein S8P -
Archaeoglobus fulgidus
Length = 129
Score = 100 bits (240), Expect = 2e-20
Identities = 46/110 (41%), Positives = 69/110 (62%), Gaps = 1/110 (0%)
Frame = +3
Query: 126 GKDKSSSGPASKVIVKFLTVMMKHGYIGEFEIVDDHRAGKIVVNLTGRLNKCGVISPRFD 305
G+ K PASK+I L VM +GYI FE V++HR GK +V L+G +N CG I PRF
Sbjct: 20 GEKKCEIKPASKLIGNVLKVMKDYGYIKGFEYVENHRGGKFIVELSGNINDCGAIRPRFS 79
Query: 306 VPINDIERW-TNLLPSRQFGYLVLTTSGGIMDHEXARRKHLGGKILGFFF 452
+ + E + LP+R FG L+++T+ G+M + AR++ LGG +L + +
Sbjct: 80 SSVTEYEMYEKRYLPARDFGILIVSTTKGVMSQKDARKQRLGGVLLAYVY 129
>UniRef50_A7D102 Cluster: Ribosomal protein S8; n=1; Halorubrum
lacusprofundi ATCC 49239|Rep: Ribosomal protein S8 -
Halorubrum lacusprofundi ATCC 49239
Length = 147
Score = 97.5 bits (232), Expect = 2e-19
Identities = 41/102 (40%), Positives = 64/102 (62%), Gaps = 1/102 (0%)
Frame = +3
Query: 150 PASKVIVKFLTVMMKHGYIGEFEIVDDHRAGKIVVNLTGRLNKCGVISPRFDVPINDIER 329
PAS +I L V+ GY+ FE VDD +AGK V L G +N+CG + PR+ ++ E+
Sbjct: 46 PASNIIGSVLEVLYDRGYVDGFEYVDDGKAGKFEVELKGAINECGAVKPRYSAGADEFEK 105
Query: 330 W-TNLLPSRQFGYLVLTTSGGIMDHEXARRKHLGGKILGFFF 452
W LP+R +G L++TTS G+M H AR + +GG+++ + +
Sbjct: 106 WEKRYLPARDYGTLIVTTSHGVMSHYEAREEGIGGQVIAYVY 147
>UniRef50_A0RVY8 Cluster: 30S ribosomal protein S8P; n=3;
Thermoprotei|Rep: 30S ribosomal protein S8P -
Cenarchaeum symbiosum
Length = 130
Score = 92.3 bits (219), Expect = 6e-18
Identities = 45/102 (44%), Positives = 62/102 (60%), Gaps = 1/102 (0%)
Frame = +3
Query: 150 PASKVIVKFLTVMMKHGYIGEFEIVDDHRAGKIVVNLTGRLNKCGVISPRFDVPINDIER 329
P SK+ V+ L + K GYIGEFE V+D R GK V+L ++ KCG ISPRF V +
Sbjct: 29 PTSKLGVEVLGTLKKAGYIGEFEHVEDSRGGKFSVHLLAKITKCGAISPRFKVKKGEYTF 88
Query: 330 W-TNLLPSRQFGYLVLTTSGGIMDHEXARRKHLGGKILGFFF 452
W LPS G LV+TT+ G+M H A + +GG ++G+ +
Sbjct: 89 WEQQYLPSYDRGMLVVTTNQGVMSHHEAAERGIGGFLIGYVY 130
>UniRef50_Q74NG1 Cluster: 30S ribosomal protein S8P; n=1;
Nanoarchaeum equitans|Rep: 30S ribosomal protein S8P -
Nanoarchaeum equitans
Length = 129
Score = 81.0 bits (191), Expect = 1e-14
Identities = 35/114 (30%), Positives = 69/114 (60%), Gaps = 1/114 (0%)
Frame = +3
Query: 114 LKSEGKDKSSSGPASKVIVKFLTVMMKHGYIGEFEIVDDHRAGKIVVNLTGRLNKCGVIS 293
++ +G+DK++ P S +I+K + +M + GYI + +VD R I + L+ N+ I
Sbjct: 16 VRRKGEDKTAFFPVSNLIIKLVEIMKREGYIKNYRLVDSSRGKIIEIELSEYFNEANAIK 75
Query: 294 PRFDVPINDIERW-TNLLPSRQFGYLVLTTSGGIMDHEXARRKHLGGKILGFFF 452
PRF V +++E++ LP+ FG L+L+TS G++ + A+ + +GG ++ + +
Sbjct: 76 PRFPVEYSELEKYEKRYLPALNFGRLILSTSKGLITNREAKEQKIGGVLIAYVY 129
>UniRef50_Q01GJ6 Cluster: Ribosomal protein S15; n=1; Ostreococcus
tauri|Rep: Ribosomal protein S15 - Ostreococcus tauri
Length = 144
Score = 63.7 bits (148), Expect = 2e-09
Identities = 36/68 (52%), Positives = 43/68 (63%), Gaps = 5/68 (7%)
Frame = +3
Query: 102 LYIMLKSEGK--DKSSSGPASKV-IVKFLTVMMKH--GYIGEFEIVDDHRAGKIVVNLTG 266
L +M K E D+SS+ K + + LTV GYI EFE +DDHRAGKIVV L G
Sbjct: 70 LQVMQKHEWNRVDRSSAAREKKTQLAQTLTVYFLRAIGYINEFEFIDDHRAGKIVVELNG 129
Query: 267 RLNKCGVI 290
R+NKCGVI
Sbjct: 130 RINKCGVI 137
Score = 35.5 bits (78), Expect = 0.72
Identities = 15/31 (48%), Positives = 23/31 (74%)
Frame = +2
Query: 59 LAMVRMNVLSDALKSIHNAEKRGKRQVLIRP 151
++ V + + +S++NAEKRGKRQVL+RP
Sbjct: 31 VSSVALTSIFHRAESMYNAEKRGKRQVLVRP 61
>UniRef50_UPI0000DA3D5D Cluster: PREDICTED: similar to ribosomal
protein S15a; n=1; Rattus norvegicus|Rep: PREDICTED:
similar to ribosomal protein S15a - Rattus norvegicus
Length = 60
Score = 52.0 bits (119), Expect = 8e-06
Identities = 27/52 (51%), Positives = 35/52 (67%)
Frame = +3
Query: 174 FLTVMMKHGYIGEFEIVDDHRAGKIVVNLTGRLNKCGVISPRFDVPINDIER 329
F+TV MK G+FEIVD+ G+I V+L G LNK GVI FDV + D+E+
Sbjct: 3 FVTVKMK---TGKFEIVDNEGVGRITVSLMGSLNKYGVIGLGFDVQLGDLEK 51
>UniRef50_Q50304 Cluster: 30S ribosomal protein S8; n=7;
Mollicutes|Rep: 30S ribosomal protein S8 - Mycoplasma
pneumoniae
Length = 142
Score = 43.2 bits (97), Expect = 0.004
Identities = 28/104 (26%), Positives = 52/104 (50%), Gaps = 6/104 (5%)
Frame = +3
Query: 153 ASKVIVKFLTVMMKHGYIGEFEIVDDHRAGKIVVNLTGRLNKCGVIS----PRFDVPIND 320
ASK+ + L +++K GY+ F+++++ K +V + + + S + P
Sbjct: 37 ASKLKIAILEILVKEGYLANFQVLENKSKTKRIVTFNLKYTQRRIPSINGVKQISKPGLR 96
Query: 321 IERWTNLLPS--RQFGYLVLTTSGGIMDHEXARRKHLGGKILGF 446
I R LP G +++TS G+M + AR K +GG+IL +
Sbjct: 97 IYRPFEKLPLVLNGLGIAIISTSDGVMTDKVARLKKIGGEILAY 140
>UniRef50_Q0JQL2 Cluster: Os01g0153200 protein; n=4; Oryza sativa|Rep:
Os01g0153200 protein - Oryza sativa subsp. japonica
(Rice)
Length = 1139
Score = 42.3 bits (95), Expect = 0.006
Identities = 18/34 (52%), Positives = 25/34 (73%)
Frame = +3
Query: 222 VDDHRAGKIVVNLTGRLNKCGVISPRFDVPINDI 323
VDDH++G+I++ GRLNK GVIS R DV + +
Sbjct: 912 VDDHKSGEIILEFDGRLNKWGVISFRSDVKVKKL 945
>UniRef50_UPI0000E1E986 Cluster: PREDICTED: hypothetical protein;
n=1; Pan troglodytes|Rep: PREDICTED: hypothetical
protein - Pan troglodytes
Length = 116
Score = 39.5 bits (88), Expect = 0.044
Identities = 15/25 (60%), Positives = 22/25 (88%)
Frame = +3
Query: 204 IGEFEIVDDHRAGKIVVNLTGRLNK 278
IG+FE++DDHRAGKIV NL+ ++ +
Sbjct: 9 IGKFEVIDDHRAGKIVENLSDKVTQ 33
>UniRef50_Q2S3Q0 Cluster: 30S ribosomal protein S8; n=2;
Sphingobacteriales|Rep: 30S ribosomal protein S8 -
Salinibacter ruber (strain DSM 13855)
Length = 133
Score = 39.5 bits (88), Expect = 0.044
Identities = 30/105 (28%), Positives = 52/105 (49%), Gaps = 4/105 (3%)
Frame = +3
Query: 150 PASKVIVKFLTVMMKHGYIGEFEIVDDHRAGKIVVNLT-GRLNKCGV-ISPRFDVPINDI 323
PASK+ ++++ GYI F +DD + G + V L ++ + + R P
Sbjct: 29 PASKLKRAMTQILLEKGYIKNFVNIDDEKQGLLRVYLKYDEYDQPAIRMLERVSRPGRRE 88
Query: 324 ERWTNLLP--SRQFGYLVLTTSGGIMDHEXARRKHLGGKILGFFF 452
++ LP G ++L+TS G+M + ARR +GG++L F
Sbjct: 89 YADSDNLPEVKNGLGIVILSTSRGVMSDKEARRFGVGGEVLAKVF 133
>UniRef50_Q8A490 Cluster: 30S ribosomal protein S8; n=15;
Bacteria|Rep: 30S ribosomal protein S8 - Bacteroides
thetaiotaomicron
Length = 131
Score = 39.1 bits (87), Expect = 0.058
Identities = 27/106 (25%), Positives = 51/106 (48%), Gaps = 5/106 (4%)
Frame = +3
Query: 150 PASKVIVKFLTVMMKHGYIGEFEIVDDHRAGKIVVNLT-GRLNKCGVISPRFDVPINDIE 326
PAS + + ++ + GYI ++ V+D G I V L +NK I V +
Sbjct: 26 PASNLKKEITKILFEKGYILNYKFVEDGPQGTIKVALKYDSVNKVNAIKKLERVSSPGMR 85
Query: 327 RWTNL--LPS--RQFGYLVLTTSGGIMDHEXARRKHLGGKILGFFF 452
++T +P G +++TS G+M ++ A +GG++L + +
Sbjct: 86 KYTGYKDMPRVINGLGIAIISTSKGVMTNKEAAELKIGGEVLCYVY 131
>UniRef50_Q81VR6 Cluster: 30S ribosomal protein S8; n=96; cellular
organisms|Rep: 30S ribosomal protein S8 - Bacillus
anthracis
Length = 132
Score = 38.3 bits (85), Expect = 0.10
Identities = 25/103 (24%), Positives = 52/103 (50%), Gaps = 4/103 (3%)
Frame = +3
Query: 150 PASKVIVKFLTVMMKHGYIGEFEIVDDHRAGKIVVNLTGRLNKCGVIS--PRFDVPINDI 323
PASK+ + ++ + G+I + E ++D++ G + + L N VI+ R P +
Sbjct: 28 PASKIKKEIAELLKREGFIRDVEYIEDNKQGILRIFLKYGANNERVITGLKRISKPGLRV 87
Query: 324 ERWTNLLPS--RQFGYLVLTTSGGIMDHEXARRKHLGGKILGF 446
+ +P G +++TS G+M + AR+ GG+++ +
Sbjct: 88 YAKADEVPRVLNGLGIALVSTSKGVMTDKDARQLQTGGEVVAY 130
>UniRef50_P46757 Cluster: Mitochondrial ribosomal protein S8; n=1;
Acanthamoeba castellanii|Rep: Mitochondrial ribosomal
protein S8 - Acanthamoeba castellanii (Amoeba)
Length = 127
Score = 37.5 bits (83), Expect = 0.18
Identities = 27/97 (27%), Positives = 45/97 (46%), Gaps = 2/97 (2%)
Frame = +3
Query: 156 SKVIVKFLTVMMKHGYIGEFEIVDDHRAGKIV--VNLTGRLNKCGVISPRFDVPINDIER 329
SK+ + L+V+ K GYI F I D ++ +N + VIS ++
Sbjct: 27 SKLCINVLSVLYKLGYIRGFIIKDQKNITILLKYINNKPAVRNIAVISTPGRRTYLKHKK 86
Query: 330 WTNLLPSRQFGYLVLTTSGGIMDHEXARRKHLGGKIL 440
L + G+L+L+TS GI+ E + +GG+ L
Sbjct: 87 LEKFLTKKDSGFLILSTSKGILTDEESNMFKIGGEAL 123
>UniRef50_Q7M8E6 Cluster: 30S ribosomal protein S8; n=26;
Epsilonproteobacteria|Rep: 30S ribosomal protein S8 -
Wolinella succinogenes
Length = 131
Score = 36.7 bits (81), Expect = 0.31
Identities = 27/101 (26%), Positives = 56/101 (55%), Gaps = 6/101 (5%)
Frame = +3
Query: 156 SKVIVKFLTVMMKHGYIGEFEIVDDHRAGKIVVNLTGRLNKCG--VIS--PRFDVPINDI 323
+K++V L V + G+I ++++D + GK +N+ + ++ G VIS R +
Sbjct: 29 AKIVVSILEVFLAKGFIESYKVID--KDGKQSINVVLKYDEKGRSVISEIKRISKSGRRV 86
Query: 324 ERWTNLLPSRQFGY--LVLTTSGGIMDHEXARRKHLGGKIL 440
+ + L + GY +V++TS G++ +E A + ++GG+ L
Sbjct: 87 YKGRDELKRFKNGYGTIVVSTSKGVIGNEEAYKANVGGEAL 127
>UniRef50_Q2GL45 Cluster: 30S ribosomal protein S8; n=8;
Rickettsiales|Rep: 30S ribosomal protein S8 - Anaplasma
phagocytophilum (strain HZ)
Length = 133
Score = 36.3 bits (80), Expect = 0.41
Identities = 31/110 (28%), Positives = 48/110 (43%), Gaps = 5/110 (4%)
Frame = +3
Query: 126 GKDKSSSGPASKVIVKFLTVMMKHGYIGEF-EIVDDHRAGKIVVNLTGRLNKCGVISP-- 296
G +K P SKV++ L ++++ GYI F E V K++ N I
Sbjct: 20 GMNKVVYVPCSKVVMAVLRILVEEGYIESFTEEVRGDSGIKVLKVFLKYFNSAAAIRKIV 79
Query: 297 RFDVPINDIERWTNLLPS--RQFGYLVLTTSGGIMDHEXARRKHLGGKIL 440
R P + + +P G +++TS GIM AR +GG+IL
Sbjct: 80 RVSRPGKRVYSSADKMPRFYNALGIYIVSTSKGIMLDSHARNAGVGGEIL 129
>UniRef50_UPI000049945C Cluster: hypothetical protein 90.t00021;
n=1; Entamoeba histolytica HM-1:IMSS|Rep: hypothetical
protein 90.t00021 - Entamoeba histolytica HM-1:IMSS
Length = 627
Score = 35.9 bits (79), Expect = 0.54
Identities = 18/51 (35%), Positives = 28/51 (54%)
Frame = +3
Query: 231 HRAGKIVVNLTGRLNKCGVISPRFDVPINDIERWTNLLPSRQFGYLVLTTS 383
H G I ++L RLN+ GV+ + + +I + LL FGYL +T+S
Sbjct: 192 HEIGNIHISLLNRLNQIGVVIGIYSNMLEEIPEYVTLL--HHFGYLTITSS 240
>UniRef50_Q6MJ26 Cluster: 30S ribosomal protein S8; n=1;
Bdellovibrio bacteriovorus|Rep: 30S ribosomal protein S8
- Bdellovibrio bacteriovorus
Length = 129
Score = 35.9 bits (79), Expect = 0.54
Identities = 31/118 (26%), Positives = 60/118 (50%), Gaps = 8/118 (6%)
Frame = +3
Query: 111 MLKSEG--KDKSSSGPASKVIVKFLTVMMKHGYIGEFEIVDDHRAGKIVVNLTGRLNKCG 284
M+++ G K + PASKV +++ G+I F++ D + G + V L + ++ G
Sbjct: 10 MIRNAGAAKHEKVDMPASKVRAGIAQILVNEGFIRSFKVAKDSKQGIMRVYL--KYDEAG 67
Query: 285 --VIS--PRFDVPINDIERWTNLLPSRQ--FGYLVLTTSGGIMDHEXARRKHLGGKIL 440
I+ R P + ++ +P+ + G +++TS GIM + A + LGG++L
Sbjct: 68 GHAINNIDRVSRPGRRVYVKSDKIPTVRSGMGMSIISTSKGIMSGKQATEQKLGGELL 125
>UniRef50_Q62GL9 Cluster: 30S ribosomal protein S8; n=68;
Bacteria|Rep: 30S ribosomal protein S8 - Burkholderia
mallei (Pseudomonas mallei)
Length = 131
Score = 35.1 bits (77), Expect = 0.95
Identities = 29/105 (27%), Positives = 47/105 (44%), Gaps = 4/105 (3%)
Frame = +3
Query: 138 SSSGPASKVIVKFLTVMMKHGYIGEFEIVDDHRAGKIVVNLTGRLNKCGVIS--PRFDVP 311
S S P+SKV V V+ GYI +F + D ++ + L + VI R P
Sbjct: 24 SVSMPSSKVKVAIAQVLKDEGYIDDFAVKADGAKAELNIALKYYAGR-PVIERLERVSKP 82
Query: 312 INDIERWTNLLPS--RQFGYLVLTTSGGIMDHEXARRKHLGGKIL 440
+ R N +P G +++T G+M AR +GG+++
Sbjct: 83 GLRVYRGRNEIPQVMNGLGVAIVSTPKGVMTDRKARATGVGGEVI 127
>UniRef50_Q7XYA5 Cluster: Ribosome protein S8; n=1; Griffithsia
japonica|Rep: Ribosome protein S8 - Griffithsia japonica
(Red alga)
Length = 142
Score = 34.3 bits (75), Expect = 1.7
Identities = 19/54 (35%), Positives = 29/54 (53%), Gaps = 2/54 (3%)
Frame = +3
Query: 297 RFDVPINDIERWTNLLPSRQ--FGYLVLTTSGGIMDHEXARRKHLGGKILGFFF 452
R VP + + R LP + G +L+T G+M AR+K LGG+++G F
Sbjct: 89 RVSVPSHRVYRKITQLPLARAGLGTWILSTPNGVMHCTEARQKRLGGEVIGEVF 142
>UniRef50_Q6D8U4 Cluster: Putative uncharacterized protein; n=1;
Pectobacterium atrosepticum|Rep: Putative
uncharacterized protein - Erwinia carotovora subsp.
atroseptica (Pectobacterium atrosepticum)
Length = 860
Score = 33.5 bits (73), Expect = 2.9
Identities = 20/51 (39%), Positives = 25/51 (49%)
Frame = -2
Query: 176 KLNDDFGSRA**GLVFSLAFQHYV*ILRRHSIRSYAPWLRFSSRFVANRID 24
+ N ++ A G + SLA Y H SY W RFSS FV+N ID
Sbjct: 335 RFNMEWEHNASWGKMTSLAGYQYTEDKTEHEADSYQTWRRFSSGFVSNVID 385
>UniRef50_Q2JIL4 Cluster: 30S ribosomal protein S8; n=93; cellular
organisms|Rep: 30S ribosomal protein S8 - Synechococcus
sp. (strain JA-2-3B'a(2-13)) (Cyanobacteria
bacteriumYellowstone B-Prime)
Length = 136
Score = 33.1 bits (72), Expect = 3.8
Identities = 27/111 (24%), Positives = 53/111 (47%), Gaps = 7/111 (6%)
Frame = +3
Query: 129 KDKSSSGPASKVIVKFLTVMMKHGYIGEFEIVDDHRAGKIVVNLT--GRLNKCGVIS--- 293
+ +S + PA+++ V+ + G++ E++ + ++V+ L G+ C I
Sbjct: 22 RHESVAVPATRMTRSIARVLHEEGFVSEWKEEGEGIQARVVLRLKYKGKGRNCRPIINGL 81
Query: 294 PRFDVPINDIERWTNLLPS--RQFGYLVLTTSGGIMDHEXARRKHLGGKIL 440
R P + R LP G +++TS GIM AR++ +GG++L
Sbjct: 82 KRVSRPGLRVYRNHKELPRVLGGIGIAIISTSNGIMTDREARKQGIGGEVL 132
>UniRef50_Q8XV26 Cluster: 30S ribosomal protein S8; n=18;
Proteobacteria|Rep: 30S ribosomal protein S8 - Ralstonia
solanacearum (Pseudomonas solanacearum)
Length = 131
Score = 32.7 bits (71), Expect = 5.0
Identities = 24/101 (23%), Positives = 44/101 (43%), Gaps = 4/101 (3%)
Frame = +3
Query: 150 PASKVIVKFLTVMMKHGYIGEFEIVDDHRAGKIVVNLTGRLNKCGVIS--PRFDVPINDI 323
P+SK+ V V+ GYI +F + + + + L + VI R P +
Sbjct: 28 PSSKLKVAIAKVLKDEGYIDDFAVTEQGGKASLTIGLKYYAGR-PVIERLERVSKPGLRV 86
Query: 324 ERWTNLLPS--RQFGYLVLTTSGGIMDHEXARRKHLGGKIL 440
+ N +P G +++T G+M AR +GG+++
Sbjct: 87 YKGRNEIPQVMNGLGVAIISTPQGLMTDRRARATGVGGEVI 127
>UniRef50_Q9ZCR9 Cluster: 30S ribosomal protein S8; n=9;
Rickettsia|Rep: 30S ribosomal protein S8 - Rickettsia
prowazekii
Length = 132
Score = 32.3 bits (70), Expect = 6.7
Identities = 27/108 (25%), Positives = 49/108 (45%), Gaps = 9/108 (8%)
Frame = +3
Query: 144 SGPASKVIVKFLTVMMKHGYIGEFEIVDDHRAGKIVV----NLTGRLNKCGV--IS---P 296
S P+SK+ L V+ K GYI ++ + V ++ G + C + +S
Sbjct: 26 SFPSSKIKTSILDVLQKEGYIKDYVTTQKNNISYTEVALKYSVNGEASICEIHRVSKPGK 85
Query: 297 RFDVPINDIERWTNLLPSRQFGYLVLTTSGGIMDHEXARRKHLGGKIL 440
R I D++ + N G +L+T G+M A K++GG+++
Sbjct: 86 RVYSAIKDLKGYYN-----NMGIYILSTPYGVMSDREAHIKNVGGEVI 128
>UniRef50_A0LRR6 Cluster: Inner-membrane translocator; n=1;
Acidothermus cellulolyticus 11B|Rep: Inner-membrane
translocator - Acidothermus cellulolyticus (strain ATCC
43068 / 11B)
Length = 337
Score = 31.9 bits (69), Expect = 8.8
Identities = 25/67 (37%), Positives = 35/67 (52%), Gaps = 3/67 (4%)
Frame = -3
Query: 256 FTTILPAL*SST---ISNSPM*PCFIITVKNLTMTLEAGPDEDLSFPSLFSIMYRF*GVT 86
FT + PA + +S + P F IT LTM + AG D DLSFP++F++ G+
Sbjct: 44 FTVLAPATFLGSRIYVSYAQTVPYFGITALALTMLIIAG-DIDLSFPAVFAL-----GMV 97
Query: 85 QYVHTHH 65
YV H
Sbjct: 98 GYVAVEH 104
>UniRef50_A0G972 Cluster: Putative uncharacterized protein
precursor; n=1; Burkholderia phymatum STM815|Rep:
Putative uncharacterized protein precursor -
Burkholderia phymatum STM815
Length = 287
Score = 31.9 bits (69), Expect = 8.8
Identities = 14/32 (43%), Positives = 20/32 (62%)
Frame = +2
Query: 119 KRGKRQVLIRPCFQSHR*VFNSDDEARLHRRV 214
+RG+R V++ P F R V + D RLHRR+
Sbjct: 83 RRGRRAVILHPRFPRLRTVGGTPDRLRLHRRI 114
>UniRef50_Q2YIA3 Cluster: Ribosomal protein S8; n=20; Halimeda|Rep:
Ribosomal protein S8 - Halimeda opuntia
Length = 133
Score = 31.9 bits (69), Expect = 8.8
Identities = 29/109 (26%), Positives = 50/109 (45%), Gaps = 10/109 (9%)
Frame = +3
Query: 150 PASKVIVKFLTVMMKHGYIGEFEIVDDHR-----AGKIVVNLTGRLNKCGVISPRFDVPI 314
P + L +++ HG+I F +++ K V+ RL++ G R V
Sbjct: 29 PLTLTTKSILNILVHHGFIKNFSQINNREFLVTLKSKSVLRKLKRLSRPGC---RLYVSA 85
Query: 315 NDIERWTNLLPSRQFGY-----LVLTTSGGIMDHEXARRKHLGGKILGF 446
++ + +L S Q G + L+TS GI+ AR +GG+ILG+
Sbjct: 86 QNLPQ---ILRSGQLGLAPRAIIFLSTSKGILSDREARHLKVGGEILGY 131
>UniRef50_P56801 Cluster: Chloroplast 30S ribosomal protein S8;
n=118; Viridiplantae|Rep: Chloroplast 30S ribosomal
protein S8 - Arabidopsis thaliana (Mouse-ear cress)
Length = 134
Score = 31.9 bits (69), Expect = 8.8
Identities = 14/31 (45%), Positives = 21/31 (67%)
Frame = +3
Query: 360 GYLVLTTSGGIMDHEXARRKHLGGKILGFFF 452
G ++L+TS GIM AR K +GG+IL + +
Sbjct: 104 GIVILSTSQGIMTDREARLKRIGGEILCYIW 134
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 450,500,452
Number of Sequences: 1657284
Number of extensions: 8183124
Number of successful extensions: 16657
Number of sequences better than 10.0: 39
Number of HSP's better than 10.0 without gapping: 16268
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16592
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 31364627325
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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