Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP02_F_N17
(513 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P46776 Cluster: 60S ribosomal protein L27a; n=204; Euka... 84 2e-15
UniRef50_Q9LR33 Cluster: 60S ribosomal protein L27a-2; n=56; Euk... 78 1e-13
UniRef50_Q00V89 Cluster: 60s ribosomal protein L15/L27; n=2; Ost... 77 2e-13
UniRef50_Q00454 Cluster: 60S ribosomal protein L27a; n=3; Eukary... 72 9e-12
UniRef50_A1BQ56 Cluster: Ribosomal protein L27a; n=4; Bilateria|... 71 2e-11
UniRef50_Q9AW02 Cluster: 60S ribosomal protein L27A; n=3; Eukary... 62 7e-09
UniRef50_Q4P992 Cluster: Putative uncharacterized protein; n=1; ... 52 6e-06
UniRef50_O62581 Cluster: 60S ribosomal protein L27a; n=1; Enceph... 50 3e-05
UniRef50_Q3LW97 Cluster: Ribosomal protein L27a; n=1; Bigelowiel... 50 4e-05
UniRef50_UPI0000DA3FAD Cluster: PREDICTED: similar to 60S riboso... 40 0.033
UniRef50_A7QSF4 Cluster: Chromosome chr12 scaffold_159, whole ge... 37 0.31
UniRef50_UPI000045C050 Cluster: hypothetical protein Npun0200706... 33 5.0
UniRef50_A5B3P3 Cluster: Putative uncharacterized protein; n=1; ... 33 5.0
UniRef50_UPI0000F1F127 Cluster: PREDICTED: hypothetical protein;... 32 6.7
UniRef50_Q6VB59 Cluster: ORF_03R; n=1; Herpes simplex virus 1 st... 32 6.7
UniRef50_A4C6P0 Cluster: Putative one-carbon metabolism transcri... 32 6.7
UniRef50_Q16MI6 Cluster: Putative uncharacterized protein; n=3; ... 32 6.7
UniRef50_Q6LXD1 Cluster: 50S ribosomal protein L15P; n=9; Euryar... 32 6.7
UniRef50_Q121E9 Cluster: Putative uncharacterized protein; n=1; ... 32 8.8
UniRef50_Q5B812 Cluster: Putative uncharacterized protein; n=1; ... 32 8.8
>UniRef50_P46776 Cluster: 60S ribosomal protein L27a; n=204;
Eukaryota|Rep: 60S ribosomal protein L27a - Homo sapiens
(Human)
Length = 148
Score = 84.2 bits (199), Expect = 2e-15
Identities = 37/75 (49%), Positives = 45/75 (60%)
Frame = +3
Query: 45 MATSKKKTRKLRGHVSXXXXXXXXXXXXXXXXXNAGGEHHHRINMDKYHPGYFGKLGMRN 224
M + +KTRKLRGHVS NAGG HHHRIN DKYHPGYFGK+GM++
Sbjct: 1 MPSRLRKTRKLRGHVSHGHGRIGKHRKHPGGRGNAGGLHHHRINFDKYHPGYFGKVGMKH 60
Query: 225 FHFSKEQEFLSSFEL 269
+H + Q F + L
Sbjct: 61 YHLKRNQSFCPTVNL 75
Score = 58.4 bits (135), Expect = 9e-08
Identities = 29/79 (36%), Positives = 44/79 (55%)
Frame = +1
Query: 232 LAKNKNFCPVLNLDKLWTLVSEQTRLKYASAPDGKVPVHQYCQSWILQVARQRQTPQTTC 411
L +N++FCP +NLDKLWTLVSEQTR+ A G P+ +S +V + + P+
Sbjct: 63 LKRNQSFCPTVNLDKLWTLVSEQTRVNAAKNKTGAAPIIDVVRSGYYKVLGKGKLPKQPV 122
Query: 412 HSKSKVLLKISREXNQXCG 468
K+K + + E + G
Sbjct: 123 IVKAKFFSRRAEEKIKSVG 141
Score = 36.7 bits (81), Expect = 0.31
Identities = 19/51 (37%), Positives = 24/51 (47%)
Frame = +2
Query: 338 SPFINIVKAXXXXXXXXXXXPKQPVIVXXXXXXXXXXXXIXDVGGACVLSA 490
+P I++V++ PKQPVIV I VGGACVL A
Sbjct: 98 APIIDVVRSGYYKVLGKGKLPKQPVIVKAKFFSRRAEEKIKSVGGACVLVA 148
>UniRef50_Q9LR33 Cluster: 60S ribosomal protein L27a-2; n=56;
Eukaryota|Rep: 60S ribosomal protein L27a-2 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 146
Score = 78.2 bits (184), Expect = 1e-13
Identities = 37/69 (53%), Positives = 41/69 (59%)
Frame = +3
Query: 45 MATSKKKTRKLRGHVSXXXXXXXXXXXXXXXXXNAGGEHHHRINMDKYHPGYFGKLGMRN 224
MAT+ KK RK RGHVS NAGG HHHRI DKYHPGYFGK+GMR
Sbjct: 1 MATALKKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGKVGMRY 60
Query: 225 FHFSKEQEF 251
FH + + F
Sbjct: 61 FHKLRNKFF 69
Score = 43.2 bits (97), Expect = 0.004
Identities = 26/78 (33%), Positives = 42/78 (53%), Gaps = 1/78 (1%)
Frame = +1
Query: 238 KNKNFCPVLNLDKLWTLVSEQTRLKYASAPDGKVPVHQYCQSWILQVARQRQTPQTTCH- 414
+NK FCP++NLDKLW+LV E + K S+ D VP+ Q +V + P+
Sbjct: 65 RNKFFCPIVNLDKLWSLVPEDVKAK--SSKD-NVPLIDVTQHGFFKVLGKGHLPENKPFV 121
Query: 415 SKSKVLLKISREXNQXCG 468
K+K++ K + + + G
Sbjct: 122 VKAKLISKTAEKKIKEAG 139
>UniRef50_Q00V89 Cluster: 60s ribosomal protein L15/L27; n=2;
Ostreococcus|Rep: 60s ribosomal protein L15/L27 -
Ostreococcus tauri
Length = 198
Score = 77.0 bits (181), Expect = 2e-13
Identities = 41/97 (42%), Positives = 50/97 (51%)
Frame = +3
Query: 51 TSKKKTRKLRGHVSXXXXXXXXXXXXXXXXXNAGGEHHHRINMDKYHPGYFGKLGMRNFH 230
T K RK RGHVS AGG+HHHRI MDKYHPGYFGK+GMR+FH
Sbjct: 54 TQLHKNRKKRGHVSAGHGRIGKHRKHPAGRGMAGGQHHHRIMMDKYHPGYFGKVGMRHFH 113
Query: 231 FSKEQEFLSSFELR*ALDISL*TDEAEVCICSRWQGP 341
K Q + + L + T++ E C + Q P
Sbjct: 114 KLKNQTVCPTINID-KLWTLVGTEKREECAKNTSQAP 149
>UniRef50_Q00454 Cluster: 60S ribosomal protein L27a; n=3;
Eukaryota|Rep: 60S ribosomal protein L27a - Tetrahymena
thermophila
Length = 149
Score = 71.7 bits (168), Expect = 9e-12
Identities = 35/67 (52%), Positives = 39/67 (58%), Gaps = 2/67 (2%)
Frame = +3
Query: 45 MATSKKKTRKLRGHVSXXXXXXXXXXXXX--XXXXNAGGEHHHRINMDKYHPGYFGKLGM 218
M + KKTRKLRGHVS AGG HHHRI M+K+HPGY+GKLGM
Sbjct: 1 MVSHLKKTRKLRGHVSHGHGRVGKHRKGGCRGGRGKAGGMHHHRILMEKWHPGYYGKLGM 60
Query: 219 RNFHFSK 239
R FH K
Sbjct: 61 RTFHLKK 67
Score = 51.2 bits (117), Expect = 1e-05
Identities = 32/85 (37%), Positives = 44/85 (51%), Gaps = 1/85 (1%)
Frame = +1
Query: 232 LAKNKNFCPVLNLDKLWTLVSEQTRLKYASAPDGKVPVHQYCQSWILQVARQRQTPQTTC 411
L KN CPV+N+DKLW+LVS+ TR KYA KVPV ++ +V + + P
Sbjct: 65 LKKNPLHCPVVNIDKLWSLVSDATRQKYAE-DKKKVPVIDVTKAGFFKVLGKGRLPNQPV 123
Query: 412 HSKSKVLLKIS-REXNQXCGWCLCT 483
K+K K + R G C+ T
Sbjct: 124 VVKAKYFSKTAERRIVAVGGACVLT 148
Score = 35.1 bits (77), Expect = 0.95
Identities = 18/50 (36%), Positives = 22/50 (44%)
Frame = +2
Query: 341 PFINIVKAXXXXXXXXXXXPKQPVIVXXXXXXXXXXXXIXDVGGACVLSA 490
P I++ KA P QPV+V I VGGACVL+A
Sbjct: 100 PVIDVTKAGFFKVLGKGRLPNQPVVVKAKYFSKTAERRIVAVGGACVLTA 149
>UniRef50_A1BQ56 Cluster: Ribosomal protein L27a; n=4;
Bilateria|Rep: Ribosomal protein L27a - Ascaris suum
(Pig roundworm) (Ascaris lumbricoides)
Length = 133
Score = 70.9 bits (166), Expect = 2e-11
Identities = 27/32 (84%), Positives = 29/32 (90%)
Frame = +3
Query: 144 NAGGEHHHRINMDKYHPGYFGKLGMRNFHFSK 239
NAGG+HHHRIN DKYHPGYFGK+GMRNFH K
Sbjct: 20 NAGGQHHHRINFDKYHPGYFGKVGMRNFHVRK 51
Score = 50.0 bits (114), Expect = 3e-05
Identities = 27/77 (35%), Positives = 41/77 (53%)
Frame = +1
Query: 238 KNKNFCPVLNLDKLWTLVSEQTRLKYASAPDGKVPVHQYCQSWILQVARQRQTPQTTCHS 417
KN +CP +NLDKLW+LVSE+TR YA D K PV ++ +V + P+
Sbjct: 51 KNGLYCPTVNLDKLWSLVSEKTRTTYAEKKD-KAPVIDVVKAGYFKVLGKGLLPKQPVIV 109
Query: 418 KSKVLLKISREXNQXCG 468
K+K + + + + G
Sbjct: 110 KAKFFSRTAEQKIKGVG 126
Score = 39.1 bits (87), Expect = 0.058
Identities = 20/52 (38%), Positives = 25/52 (48%)
Frame = +2
Query: 335 RSPFINIVKAXXXXXXXXXXXPKQPVIVXXXXXXXXXXXXIXDVGGACVLSA 490
++P I++VKA PKQPVIV I VGGAC+L A
Sbjct: 82 KAPVIDVVKAGYFKVLGKGLLPKQPVIVKAKFFSRTAEQKIKGVGGACILVA 133
>UniRef50_Q9AW02 Cluster: 60S ribosomal protein L27A; n=3;
Eukaryota|Rep: 60S ribosomal protein L27A - Guillardia
theta (Cryptomonas phi)
Length = 144
Score = 62.1 bits (144), Expect = 7e-09
Identities = 29/75 (38%), Positives = 39/75 (52%)
Frame = +3
Query: 45 MATSKKKTRKLRGHVSXXXXXXXXXXXXXXXXXNAGGEHHHRINMDKYHPGYFGKLGMRN 224
M T +++RK RGHVS N+GG+HHH+I +KYH +FGK GMR
Sbjct: 1 MPTDIRRSRKKRGHVSSGHGRVGKHRKHPGGRGNSGGQHHHKIFFEKYHKKHFGKTGMRY 60
Query: 225 FHFSKEQEFLSSFEL 269
+ K+ F S L
Sbjct: 61 YRKLKQNNFNKSINL 75
>UniRef50_Q4P992 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 187
Score = 52.4 bits (120), Expect = 6e-06
Identities = 25/50 (50%), Positives = 26/50 (52%)
Frame = +3
Query: 45 MATSKKKTRKLRGHVSXXXXXXXXXXXXXXXXXNAGGEHHHRINMDKYHP 194
M T KTRK RGHVS AGG+HHHR NMDKYHP
Sbjct: 1 MPTHLSKTRKHRGHVSAGNGRVGKHRKHPGGRGLAGGQHHHRTNMDKYHP 50
Score = 42.3 bits (95), Expect = 0.006
Identities = 25/79 (31%), Positives = 42/79 (53%)
Frame = +1
Query: 232 LAKNKNFCPVLNLDKLWTLVSEQTRLKYASAPDGKVPVHQYCQSWILQVARQRQTPQTTC 411
L +N +F PV+NLDKLWTLV + R K +A +VPV + +V + + P C
Sbjct: 103 LTRNSSFRPVVNLDKLWTLVPAEQR-KGLTADSTEVPVIDTLAAGYGKVLGKGRLPALPC 161
Query: 412 HSKSKVLLKISREXNQXCG 468
K++ + ++ + + G
Sbjct: 162 IVKARWVSSLAEKKIKEAG 180
>UniRef50_O62581 Cluster: 60S ribosomal protein L27a; n=1;
Encephalitozoon cuniculi|Rep: 60S ribosomal protein L27a
- Encephalitozoon cuniculi
Length = 147
Score = 50.0 bits (114), Expect = 3e-05
Identities = 25/69 (36%), Positives = 32/69 (46%)
Frame = +3
Query: 45 MATSKKKTRKLRGHVSXXXXXXXXXXXXXXXXXNAGGEHHHRINMDKYHPGYFGKLGMRN 224
M KKTRKLRGHVS AGG H + ++HP Y GK GMR
Sbjct: 1 MTDRVKKTRKLRGHVSHGYGRVGKHRKHSGGRGLAGGFSHMKTFFTRFHPDYHGKRGMRV 60
Query: 225 FHFSKEQEF 251
+H + ++
Sbjct: 61 YHRKENSDY 69
>UniRef50_Q3LW97 Cluster: Ribosomal protein L27a; n=1; Bigelowiella
natans|Rep: Ribosomal protein L27a - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 151
Score = 49.6 bits (113), Expect = 4e-05
Identities = 26/76 (34%), Positives = 36/76 (47%), Gaps = 2/76 (2%)
Frame = +3
Query: 45 MATSKKKTRKLRGHVSXXXXXXXXXXXXXXXXXNAGGEHHHRINMDKYHPGYFGKLGMRN 224
M T KK+RK+RG S +GG+HHH+I ++Y YF K GMR
Sbjct: 1 MVTKLKKSRKMRGKNSSGHGRINKHRKNPGGKGKSGGQHHHKIIFERYRETYFRKTGMRI 60
Query: 225 FHFSK--EQEFLSSFE 266
++ K FL F+
Sbjct: 61 YNLEKTLNSTFLLKFK 76
>UniRef50_UPI0000DA3FAD Cluster: PREDICTED: similar to 60S ribosomal
protein L27a; n=1; Rattus norvegicus|Rep: PREDICTED:
similar to 60S ribosomal protein L27a - Rattus
norvegicus
Length = 86
Score = 39.9 bits (89), Expect = 0.033
Identities = 21/51 (41%), Positives = 24/51 (47%)
Frame = +3
Query: 45 MATSKKKTRKLRGHVSXXXXXXXXXXXXXXXXXNAGGEHHHRINMDKYHPG 197
M+ +KTRK +GHVS NAGGEH HRIN PG
Sbjct: 1 MSGRLRKTRKFQGHVSDSHSRISKHHKHRGGQRNAGGEHLHRINCYYKVPG 51
>UniRef50_A7QSF4 Cluster: Chromosome chr12 scaffold_159, whole
genome shotgun sequence; n=3; Vitis vinifera|Rep:
Chromosome chr12 scaffold_159, whole genome shotgun
sequence - Vitis vinifera (Grape)
Length = 151
Score = 36.7 bits (81), Expect = 0.31
Identities = 13/17 (76%), Positives = 16/17 (94%)
Frame = +3
Query: 180 DKYHPGYFGKLGMRNFH 230
DK+HPG FGK+GMR+FH
Sbjct: 28 DKHHPGNFGKVGMRHFH 44
>UniRef50_UPI000045C050 Cluster: hypothetical protein Npun02007068;
n=1; Nostoc punctiforme PCC 73102|Rep: hypothetical
protein Npun02007068 - Nostoc punctiforme PCC 73102
Length = 54
Score = 32.7 bits (71), Expect = 5.0
Identities = 14/37 (37%), Positives = 22/37 (59%)
Frame = -3
Query: 259 LDRNSCSLLKWKFLIPSLPKYPGWYLSMLIL*WCSPP 149
LDR S + + F +P+LPKY W ++ +L + PP
Sbjct: 8 LDRTSNKIAVFDFKLPNLPKYVFWTATVYLLEYGKPP 44
>UniRef50_A5B3P3 Cluster: Putative uncharacterized protein; n=1;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 181
Score = 32.7 bits (71), Expect = 5.0
Identities = 12/17 (70%), Positives = 13/17 (76%)
Frame = -3
Query: 229 WKFLIPSLPKYPGWYLS 179
WK LIP+ PK PGW LS
Sbjct: 20 WKCLIPTFPKLPGWCLS 36
>UniRef50_UPI0000F1F127 Cluster: PREDICTED: hypothetical protein;
n=7; Danio rerio|Rep: PREDICTED: hypothetical protein -
Danio rerio
Length = 656
Score = 32.3 bits (70), Expect = 6.7
Identities = 14/31 (45%), Positives = 19/31 (61%)
Frame = +1
Query: 247 NFCPVLNLDKLWTLVSEQTRLKYASAPDGKV 339
NFCP L D WT++S+ + Y S+PD V
Sbjct: 116 NFCPWLEED--WTMLSDDSTTPYESSPDNSV 144
>UniRef50_Q6VB59 Cluster: ORF_03R; n=1; Herpes simplex virus 1
strain R-15|Rep: ORF_03R - Human herpesvirus 1 (strain
R15) (HHV-1) (Human herpes simplex virus1)
Length = 172
Score = 32.3 bits (70), Expect = 6.7
Identities = 19/47 (40%), Positives = 24/47 (51%)
Frame = -3
Query: 235 LKWKFLIPSLPKYPGWYLSMLIL*WCSPPALPRPPGCLRCFPIRPCP 95
L+WK P+ P W +S+ L PP PGCLR +PI P P
Sbjct: 32 LRWKPQNPAGPSLCVWRMSLGSL--TGPPRRAPSPGCLRSWPI-PAP 75
>UniRef50_A4C6P0 Cluster: Putative one-carbon metabolism
transcriptional regulator; n=3; Alteromonadales|Rep:
Putative one-carbon metabolism transcriptional regulator
- Pseudoalteromonas tunicata D2
Length = 304
Score = 32.3 bits (70), Expect = 6.7
Identities = 18/39 (46%), Positives = 27/39 (69%), Gaps = 1/39 (2%)
Frame = -2
Query: 320 DAYFSLVCSETNVQSLSKFKTGQKFLFFAKVEISH-TKF 207
D+YFS+ +++ QSL++ K K+ FAKV ISH T+F
Sbjct: 64 DSYFSITSADSFEQSLAELK---KYAVFAKVTISHNTEF 99
>UniRef50_Q16MI6 Cluster: Putative uncharacterized protein; n=3;
Aedes aegypti|Rep: Putative uncharacterized protein -
Aedes aegypti (Yellowfever mosquito)
Length = 1151
Score = 32.3 bits (70), Expect = 6.7
Identities = 18/42 (42%), Positives = 24/42 (57%), Gaps = 1/42 (2%)
Frame = +1
Query: 343 VH-QYCQSWILQVARQRQTPQTTCHSKSKVLLKISREXNQXC 465
VH +Y Q ++ + +QR T Q H + KVLL SRE N C
Sbjct: 721 VHSRYAQLIVITIEQQRDTAQGVIH-RLKVLLDKSRELNSAC 761
>UniRef50_Q6LXD1 Cluster: 50S ribosomal protein L15P; n=9;
Euryarchaeota|Rep: 50S ribosomal protein L15P -
Methanococcus maripaludis
Length = 143
Score = 32.3 bits (70), Expect = 6.7
Identities = 17/43 (39%), Positives = 26/43 (60%), Gaps = 1/43 (2%)
Frame = +3
Query: 144 NAGGEHHHRINMDKYHPGYFGKLGM-RNFHFSKEQEFLSSFEL 269
NAG + H +++ K++P YFGK G RN K+ E ++ EL
Sbjct: 36 NAGHQKHKWLSVCKFNPDYFGKYGFNRNPCLIKQLETINIGEL 78
>UniRef50_Q121E9 Cluster: Putative uncharacterized protein; n=1;
Polaromonas sp. JS666|Rep: Putative uncharacterized
protein - Polaromonas sp. (strain JS666 / ATCC BAA-500)
Length = 321
Score = 31.9 bits (69), Expect = 8.8
Identities = 16/40 (40%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
Frame = +1
Query: 253 CPVLNLDKLWTLVSEQTRLKYASAP-DGKVPVHQYCQSWI 369
C + L ++WT V EQ R+K A+ P D +PVH W+
Sbjct: 283 CGEVELARVWTKV-EQIRVKQAAKPKDSPLPVHVAAGGWL 321
>UniRef50_Q5B812 Cluster: Putative uncharacterized protein; n=1;
Emericella nidulans|Rep: Putative uncharacterized
protein - Emericella nidulans (Aspergillus nidulans)
Length = 1678
Score = 31.9 bits (69), Expect = 8.8
Identities = 19/54 (35%), Positives = 27/54 (50%)
Frame = -1
Query: 450 FSADFEKNFAFTMTGCLGSLPLPSNL*YPALTILMNGDLAIWSRCILQPRLFRD 289
FS D E F F S P+PS+ L + +N L +WS C+ P +FR+
Sbjct: 591 FSRDLEMPFDFVQASFANS-PIPSDFGGNILKLAIN-ILDVWSDCLDGPAIFRE 642
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 482,833,914
Number of Sequences: 1657284
Number of extensions: 9175646
Number of successful extensions: 22507
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 21781
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22491
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 31364627325
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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