Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP02_F_N17
(513 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U66358-1|AAC47472.1| 149|Drosophila melanogaster RpL27a protein. 89 3e-18
U66357-1|AAC47475.1| 149|Drosophila melanogaster ribosomal prot... 89 3e-18
AY071144-1|AAL48766.1| 149|Drosophila melanogaster RE17991p pro... 89 3e-18
AE014134-746|AAF51006.3| 149|Drosophila melanogaster CG15442-PA... 89 3e-18
X74484-1|CAA52601.1| 149|Drosophila melanogaster ribosomal prot... 87 1e-17
>U66358-1|AAC47472.1| 149|Drosophila melanogaster RpL27a protein.
Length = 149
Score = 89.0 bits (211), Expect = 3e-18
Identities = 39/71 (54%), Positives = 44/71 (61%)
Frame = +3
Query: 57 KKKTRKLRGHVSXXXXXXXXXXXXXXXXXNAGGEHHHRINMDKYHPGYFGKLGMRNFHFS 236
+KKTRKLRGHVS NAGG HHHRIN DKYHPGYFGK+GMRNFH
Sbjct: 6 RKKTRKLRGHVSHGHGRIGKHRKHPGGRGNAGGMHHHRINFDKYHPGYFGKVGMRNFHLR 65
Query: 237 KEQEFLSSFEL 269
++ +F L
Sbjct: 66 RQHKFRPEINL 76
Score = 30.7 bits (66), Expect = 1.2
Identities = 14/38 (36%), Positives = 19/38 (50%)
Frame = +1
Query: 232 LAKNKNFCPVLNLDKLWTLVSEQTRLKYASAPDGKVPV 345
L + F P +NLDKLW+LV + + K PV
Sbjct: 64 LRRQHKFRPEINLDKLWSLVGAEKFAELEKEKSTKAPV 101
Score = 29.1 bits (62), Expect = 3.7
Identities = 16/52 (30%), Positives = 22/52 (42%)
Frame = +2
Query: 335 RSPFINIVKAXXXXXXXXXXXPKQPVIVXXXXXXXXXXXXIXDVGGACVLSA 490
++P I++VK P +PVIV I GG C+LSA
Sbjct: 98 KAPVIDLVKFGYYKLLGRGHLPARPVIVKAKYFSKKAEDKIKKAGGVCLLSA 149
>U66357-1|AAC47475.1| 149|Drosophila melanogaster ribosomal protein
RpL27a protein.
Length = 149
Score = 89.0 bits (211), Expect = 3e-18
Identities = 39/71 (54%), Positives = 44/71 (61%)
Frame = +3
Query: 57 KKKTRKLRGHVSXXXXXXXXXXXXXXXXXNAGGEHHHRINMDKYHPGYFGKLGMRNFHFS 236
+KKTRKLRGHVS NAGG HHHRIN DKYHPGYFGK+GMRNFH
Sbjct: 6 RKKTRKLRGHVSHGHGRIGKHRKHPGGRGNAGGMHHHRINFDKYHPGYFGKVGMRNFHLR 65
Query: 237 KEQEFLSSFEL 269
++ +F L
Sbjct: 66 RQHKFRPEINL 76
Score = 30.7 bits (66), Expect = 1.2
Identities = 14/38 (36%), Positives = 19/38 (50%)
Frame = +1
Query: 232 LAKNKNFCPVLNLDKLWTLVSEQTRLKYASAPDGKVPV 345
L + F P +NLDKLW+LV + + K PV
Sbjct: 64 LRRQHKFRPEINLDKLWSLVGAEKFAELEKEKSTKAPV 101
Score = 29.1 bits (62), Expect = 3.7
Identities = 16/52 (30%), Positives = 22/52 (42%)
Frame = +2
Query: 335 RSPFINIVKAXXXXXXXXXXXPKQPVIVXXXXXXXXXXXXIXDVGGACVLSA 490
++P I++VK P +PVIV I GG C+LSA
Sbjct: 98 KAPVIDLVKFGYYKLLGRGHLPARPVIVKAKYFSKKAEDKIKKAGGVCLLSA 149
>AY071144-1|AAL48766.1| 149|Drosophila melanogaster RE17991p
protein.
Length = 149
Score = 89.0 bits (211), Expect = 3e-18
Identities = 39/71 (54%), Positives = 44/71 (61%)
Frame = +3
Query: 57 KKKTRKLRGHVSXXXXXXXXXXXXXXXXXNAGGEHHHRINMDKYHPGYFGKLGMRNFHFS 236
+KKTRKLRGHVS NAGG HHHRIN DKYHPGYFGK+GMRNFH
Sbjct: 6 RKKTRKLRGHVSHGHGRIGKHRKHPGGRGNAGGMHHHRINFDKYHPGYFGKVGMRNFHLR 65
Query: 237 KEQEFLSSFEL 269
++ +F L
Sbjct: 66 RQHKFRPEINL 76
Score = 30.7 bits (66), Expect = 1.2
Identities = 14/38 (36%), Positives = 19/38 (50%)
Frame = +1
Query: 232 LAKNKNFCPVLNLDKLWTLVSEQTRLKYASAPDGKVPV 345
L + F P +NLDKLW+LV + + K PV
Sbjct: 64 LRRQHKFRPEINLDKLWSLVGAEKFAELEKEKSTKAPV 101
Score = 29.1 bits (62), Expect = 3.7
Identities = 16/52 (30%), Positives = 22/52 (42%)
Frame = +2
Query: 335 RSPFINIVKAXXXXXXXXXXXPKQPVIVXXXXXXXXXXXXIXDVGGACVLSA 490
++P I++VK P +PVIV I GG C+LSA
Sbjct: 98 KAPVIDLVKFGYYKLLGRGHLPARPVIVKAKYFSKKAEDKIKKAGGVCLLSA 149
>AE014134-746|AAF51006.3| 149|Drosophila melanogaster CG15442-PA
protein.
Length = 149
Score = 89.0 bits (211), Expect = 3e-18
Identities = 39/71 (54%), Positives = 44/71 (61%)
Frame = +3
Query: 57 KKKTRKLRGHVSXXXXXXXXXXXXXXXXXNAGGEHHHRINMDKYHPGYFGKLGMRNFHFS 236
+KKTRKLRGHVS NAGG HHHRIN DKYHPGYFGK+GMRNFH
Sbjct: 6 RKKTRKLRGHVSHGHGRIGKHRKHPGGRGNAGGMHHHRINFDKYHPGYFGKVGMRNFHLR 65
Query: 237 KEQEFLSSFEL 269
++ +F L
Sbjct: 66 RQHKFRPEINL 76
Score = 30.7 bits (66), Expect = 1.2
Identities = 14/38 (36%), Positives = 19/38 (50%)
Frame = +1
Query: 232 LAKNKNFCPVLNLDKLWTLVSEQTRLKYASAPDGKVPV 345
L + F P +NLDKLW+LV + + K PV
Sbjct: 64 LRRQHKFRPEINLDKLWSLVGAEKFAELEKEKSTKAPV 101
Score = 29.1 bits (62), Expect = 3.7
Identities = 16/52 (30%), Positives = 22/52 (42%)
Frame = +2
Query: 335 RSPFINIVKAXXXXXXXXXXXPKQPVIVXXXXXXXXXXXXIXDVGGACVLSA 490
++P I++VK P +PVIV I GG C+LSA
Sbjct: 98 KAPVIDLVKFGYYKLLGRGHLPARPVIVKAKYFSKKAEDKIKKAGGVCLLSA 149
>X74484-1|CAA52601.1| 149|Drosophila melanogaster ribosomal protein
L27a protein.
Length = 149
Score = 87.0 bits (206), Expect = 1e-17
Identities = 38/71 (53%), Positives = 43/71 (60%)
Frame = +3
Query: 57 KKKTRKLRGHVSXXXXXXXXXXXXXXXXXNAGGEHHHRINMDKYHPGYFGKLGMRNFHFS 236
+KKTRKLRGHVS N GG HHHRIN DKYHPGYFGK+GMRNFH
Sbjct: 6 RKKTRKLRGHVSHGHGRIGKHRKHPGGRGNLGGMHHHRINFDKYHPGYFGKVGMRNFHLR 65
Query: 237 KEQEFLSSFEL 269
++ +F L
Sbjct: 66 RQHKFRPEINL 76
Score = 30.7 bits (66), Expect = 1.2
Identities = 14/38 (36%), Positives = 19/38 (50%)
Frame = +1
Query: 232 LAKNKNFCPVLNLDKLWTLVSEQTRLKYASAPDGKVPV 345
L + F P +NLDKLW+LV + + K PV
Sbjct: 64 LRRQHKFRPEINLDKLWSLVGAEKFAELEKEKSTKAPV 101
Score = 30.3 bits (65), Expect = 1.6
Identities = 16/52 (30%), Positives = 23/52 (44%)
Frame = +2
Query: 335 RSPFINIVKAXXXXXXXXXXXPKQPVIVXXXXXXXXXXXXIXDVGGACVLSA 490
++P I++VK P +PVIV I + GG C+LSA
Sbjct: 98 KAPVIDLVKFGYYKLLGRGHLPARPVIVKAKYFSKKAEDKIKEAGGVCLLSA 149
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,023,471
Number of Sequences: 53049
Number of extensions: 457063
Number of successful extensions: 1551
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1242
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1459
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1867000320
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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