Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP02_F_N17
         (513 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ468657-1|ABE02558.1|  322|Apis mellifera 1,4,5-trisphosphate r...    24   1.1  
AB006152-1|BAA24504.1|  178|Apis mellifera inositol 1,4,5-tripho...    24   1.1  
EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.          22   4.3  
EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.      22   4.3  
AF388659-1|AAK71995.1|  782|Apis mellifera 1D-myo-inositol-trisp...    22   4.3  
EF117814-1|ABO38437.1|  570|Apis mellifera cryptochrome 2 protein.     21   9.9  
DQ000307-1|AAY21180.1|  423|Apis mellifera major royal jelly pro...    21   9.9  
AJ555537-1|CAD88245.1|  210|Apis mellifera putative chemosensory...    21   9.9  

>DQ468657-1|ABE02558.1|  322|Apis mellifera 1,4,5-trisphosphate
           receptor protein.
          Length = 322

 Score = 23.8 bits (49), Expect = 1.1
 Identities = 12/30 (40%), Positives = 16/30 (53%)
 Frame = +3

Query: 177 MDKYHPGYFGKLGMRNFHFSKEQEFLSSFE 266
           M  Y P   G L +   HFS+ QE L +F+
Sbjct: 136 MHDYPPLVSGALHLLFRHFSQRQEVLQAFK 165


>AB006152-1|BAA24504.1|  178|Apis mellifera inositol
           1,4,5-triphosphate recepter protein.
          Length = 178

 Score = 23.8 bits (49), Expect = 1.1
 Identities = 12/30 (40%), Positives = 16/30 (53%)
 Frame = +3

Query: 177 MDKYHPGYFGKLGMRNFHFSKEQEFLSSFE 266
           M  Y P   G L +   HFS+ QE L +F+
Sbjct: 104 MHDYPPLVSGALHLLFRHFSQRQEVLQAFK 133


>EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.
          Length = 684

 Score = 21.8 bits (44), Expect = 4.3
 Identities = 8/16 (50%), Positives = 13/16 (81%)
 Frame = +2

Query: 17  FQKFDGTLNHGHLKKE 64
           F++FD T+N+G L +E
Sbjct: 463 FEQFDTTINNGLLLEE 478


>EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.
          Length = 684

 Score = 21.8 bits (44), Expect = 4.3
 Identities = 8/16 (50%), Positives = 13/16 (81%)
 Frame = +2

Query: 17  FQKFDGTLNHGHLKKE 64
           F++FD T+N+G L +E
Sbjct: 463 FEQFDTTINNGLLLEE 478


>AF388659-1|AAK71995.1|  782|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform A protein.
          Length = 782

 Score = 21.8 bits (44), Expect = 4.3
 Identities = 12/44 (27%), Positives = 18/44 (40%)
 Frame = -3

Query: 355 NIDERGPCHLEQMHTSASSVQRLMSKAYLSSKLDRNSCSLLKWK 224
           N  +     L    T +  V      +YL  KL+RN   L K++
Sbjct: 271 NESDHNDGRLRYWRTPSVVVSDYSDYSYLDEKLERNDLDLEKYE 314


>EF117814-1|ABO38437.1|  570|Apis mellifera cryptochrome 2 protein.
          Length = 570

 Score = 20.6 bits (41), Expect = 9.9
 Identities = 7/26 (26%), Positives = 14/26 (53%)
 Frame = +1

Query: 346 HQYCQSWILQVARQRQTPQTTCHSKS 423
           H   ++W+    R + TPQ+   S++
Sbjct: 242 HLERKAWVASFGRPKMTPQSLLPSQT 267


>DQ000307-1|AAY21180.1|  423|Apis mellifera major royal jelly
           protein 9 protein.
          Length = 423

 Score = 20.6 bits (41), Expect = 9.9
 Identities = 9/18 (50%), Positives = 10/18 (55%)
 Frame = -2

Query: 314 YFSLVCSETNVQSLSKFK 261
           YFS+VC      SL  FK
Sbjct: 11  YFSIVCQAKAHYSLRDFK 28


>AJ555537-1|CAD88245.1|  210|Apis mellifera putative chemosensory
           receptor 2 protein.
          Length = 210

 Score = 20.6 bits (41), Expect = 9.9
 Identities = 8/32 (25%), Positives = 16/32 (50%)
 Frame = -1

Query: 252 EILVLC*SGNFSYQVCQSIQDGTCPC*FCDGA 157
           ++ +LC  GN   +   S+ +    C + DG+
Sbjct: 169 QVFMLCIFGNRLIEESSSVMEAAYSCHWYDGS 200


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 135,933
Number of Sequences: 438
Number of extensions: 3155
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 14232156
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)