Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP02_F_N16
         (664 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

04_03_1048 - 21998214-21998413,21998507-21998674,21998758-219989...    64   9e-11
11_04_0443 - 17808897-17809110,17809169-17813652                       32   0.47 
11_04_0442 - 17790811-17790889,17791047-17791114,17791144-177911...    31   1.1  
10_08_0271 - 16382655-16384451                                         29   4.4  
10_08_0270 + 16378878-16380566                                         29   4.4  
01_01_0206 - 1770622-1771347                                           28   7.6  

>04_03_1048 -
           21998214-21998413,21998507-21998674,21998758-21998977,
           21999571-21999761,21999869-21999962,22000257-22000500,
           22001314-22001411,22001509-22001600,22001695-22001809,
           22001890-22002036,22003031-22003255
          Length = 597

 Score = 64.1 bits (149), Expect = 9e-11
 Identities = 37/111 (33%), Positives = 55/111 (49%), Gaps = 1/111 (0%)
 Frame = +2

Query: 335 IIRALVXYFITSMFRQPSAPKTDINNPSSAPRAPAVNMFANGTILDMYCYLSEQEFNTNF 514
           I+R  V ++  + F  P  P  +       P     N+F  G  LDM+ YLSE E   +F
Sbjct: 38  IVRMAVFWYFAAKFFGPKRPPAE-------PGMLMSNLFQKGEPLDMWMYLSENEKFNDF 90

Query: 515 DNSN-LIWQHSGLVYGDWYSXPNGDGSYSHSASITPSFALKNNGSIYLHVY 664
            N + L+W  + + Y  W        + +H+ +  PS A+KNNGS+Y HVY
Sbjct: 91  SNEDALVWHEANIPYAVW----GPTSTRTHTLTYYPSEAIKNNGSLYAHVY 137


>11_04_0443 - 17808897-17809110,17809169-17813652
          Length = 1565

 Score = 31.9 bits (69), Expect = 0.47
 Identities = 14/40 (35%), Positives = 22/40 (55%)
 Frame = +2

Query: 461  TILDMYCYLSEQEFNTNFDNSNLIWQHSGLVYGDWYSXPN 580
            TI  +Y YL +  +    ++SN +W  SG+  G+W S  N
Sbjct: 1210 TISRIYMYLMDCNWKPVNNSSNWVWVPSGIQSGEWVSPAN 1249


>11_04_0442 - 17790811-17790889,17791047-17791114,17791144-17791166,
            17791210-17795913,17797414-17797624,17798478-17798666
          Length = 1757

 Score = 30.7 bits (66), Expect = 1.1
 Identities = 13/42 (30%), Positives = 21/42 (50%)
 Frame = +2

Query: 455  NGTILDMYCYLSEQEFNTNFDNSNLIWQHSGLVYGDWYSXPN 580
            + TI  +Y YL +  +      SN +W  +G   G+W S P+
Sbjct: 1326 SATISRIYLYLKDCNWEPENKTSNWVWLPNGSGSGEWVSAPS 1367


>10_08_0271 - 16382655-16384451
          Length = 598

 Score = 28.7 bits (61), Expect = 4.4
 Identities = 15/43 (34%), Positives = 23/43 (53%)
 Frame = +2

Query: 209 SHDGSSVVAADDNLDINARVEEERRRMQPTKLESFFAITKSLI 337
           +H   SV  ++D++  NA +EE  RR+ P  +E       SLI
Sbjct: 480 NHADYSVYISEDDVRRNASIEERLRRIAPAAVERMRETVISLI 522


>10_08_0270 + 16378878-16380566
          Length = 562

 Score = 28.7 bits (61), Expect = 4.4
 Identities = 15/43 (34%), Positives = 23/43 (53%)
 Frame = +2

Query: 209 SHDGSSVVAADDNLDINARVEEERRRMQPTKLESFFAITKSLI 337
           +H   SV  ++D++  NA +EE  RR+ P  +E       SLI
Sbjct: 444 NHADYSVYISEDDVRRNASIEERLRRIAPAAVERMRETVISLI 486


>01_01_0206 - 1770622-1771347
          Length = 241

 Score = 27.9 bits (59), Expect = 7.6
 Identities = 13/36 (36%), Positives = 21/36 (58%)
 Frame = +2

Query: 362 ITSMFRQPSAPKTDINNPSSAPRAPAVNMFANGTIL 469
           + S +R+   P+ D  N ++A  APA  +FA G +L
Sbjct: 40  VMSSWRRLPEPEFDFANAAAADVAPADRLFAGGKLL 75


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,466,335
Number of Sequences: 37544
Number of extensions: 283787
Number of successful extensions: 637
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 625
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 635
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1667659452
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)