Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP02_F_N16
         (664 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY052040-1|AAK93464.1|  641|Drosophila melanogaster LP05054p pro...   127   2e-29
AE014134-711|AAF51035.2|  641|Drosophila melanogaster CG3702-PA ...   127   2e-29
AY051848-1|AAK93272.1|  480|Drosophila melanogaster LD35087p pro...    34   0.20 
AE014298-2920|AAF49009.1|  480|Drosophila melanogaster CG14232-P...    34   0.20 

>AY052040-1|AAK93464.1|  641|Drosophila melanogaster LP05054p
           protein.
          Length = 641

 Score =  127 bits (306), Expect = 2e-29
 Identities = 64/154 (41%), Positives = 94/154 (61%), Gaps = 7/154 (4%)
 Frame = +2

Query: 224 SVVAADDNLDINARVEEERRRM----QPTKLESFFAITKSLIIRALVXYFITSMFRQPS- 388
           +V+A + N ++     +  ++     QPT++ESFFA+TKSLI+RAL+ YF++S FR+P+ 
Sbjct: 14  AVIAGNGNAELAQNEGQNEQQQPPPNQPTRMESFFAMTKSLILRALIIYFVSSFFRRPAP 73

Query: 389 -APKTDINNPSSAPRAPAVNMFANGTILDMYCYLSEQEFNTNFDN-SNLIWQHSGLVYGD 562
            A     +  ++ P+  A N F NGT  D++ +LSE     NF   +NL+W    L YGD
Sbjct: 74  DAASQGKSVANAGPKITAWNYFENGTDFDLHVWLSENPDVVNFQQKANLLWLQKDLTYGD 133

Query: 563 WYSXPNGDGSYSHSASITPSFALKNNGSIYLHVY 664
           W S  NGDG Y+HS  +  S  L NNGS+YLH +
Sbjct: 134 WTSGVNGDGIYTHSLKLKTSQHLMNNGSVYLHAF 167


>AE014134-711|AAF51035.2|  641|Drosophila melanogaster CG3702-PA
           protein.
          Length = 641

 Score =  127 bits (306), Expect = 2e-29
 Identities = 64/154 (41%), Positives = 94/154 (61%), Gaps = 7/154 (4%)
 Frame = +2

Query: 224 SVVAADDNLDINARVEEERRRM----QPTKLESFFAITKSLIIRALVXYFITSMFRQPS- 388
           +V+A + N ++     +  ++     QPT++ESFFA+TKSLI+RAL+ YF++S FR+P+ 
Sbjct: 14  AVIAGNGNAELAQNEGQNEQQQPPPNQPTRMESFFAMTKSLILRALIIYFVSSFFRRPAP 73

Query: 389 -APKTDINNPSSAPRAPAVNMFANGTILDMYCYLSEQEFNTNFDN-SNLIWQHSGLVYGD 562
            A     +  ++ P+  A N F NGT  D++ +LSE     NF   +NL+W    L YGD
Sbjct: 74  DAASQGKSVANAGPKITAWNYFENGTDFDLHVWLSENPDVVNFQQKANLLWLQKDLTYGD 133

Query: 563 WYSXPNGDGSYSHSASITPSFALKNNGSIYLHVY 664
           W S  NGDG Y+HS  +  S  L NNGS+YLH +
Sbjct: 134 WTSGVNGDGIYTHSLKLKTSQHLMNNGSVYLHAF 167


>AY051848-1|AAK93272.1|  480|Drosophila melanogaster LD35087p
           protein.
          Length = 480

 Score = 33.9 bits (74), Expect = 0.20
 Identities = 20/62 (32%), Positives = 32/62 (51%), Gaps = 7/62 (11%)
 Frame = +2

Query: 404 INNPSSAPRAPA---VNMFA----NGTILDMYCYLSEQEFNTNFDNSNLIWQHSGLVYGD 562
           +NNP++AP+AP    V ++     N   +  + Y  E  +   FDNS  IW++  L Y  
Sbjct: 417 VNNPTAAPKAPISIIVPIYRRECYNEVYVGSHSYPGEGVYLLKFDNSYSIWRNKTLYYRV 476

Query: 563 WY 568
           +Y
Sbjct: 477 YY 478


>AE014298-2920|AAF49009.1|  480|Drosophila melanogaster CG14232-PA
           protein.
          Length = 480

 Score = 33.9 bits (74), Expect = 0.20
 Identities = 20/62 (32%), Positives = 32/62 (51%), Gaps = 7/62 (11%)
 Frame = +2

Query: 404 INNPSSAPRAPA---VNMFA----NGTILDMYCYLSEQEFNTNFDNSNLIWQHSGLVYGD 562
           +NNP++AP+AP    V ++     N   +  + Y  E  +   FDNS  IW++  L Y  
Sbjct: 417 VNNPTAAPKAPISIIVPIYRRECYNEVYVGSHSYPGEGVYLLKFDNSYSIWRNKTLYYRV 476

Query: 563 WY 568
           +Y
Sbjct: 477 YY 478


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,893,971
Number of Sequences: 53049
Number of extensions: 521762
Number of successful extensions: 1232
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1196
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1221
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2848092300
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)