SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP02_F_N12
         (635 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY695256-1|AAW21973.1|  168|Tribolium castaneum ventral nerve co...    29   0.043
AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.    27   0.13 
AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.    27   0.13 
AY531877-1|AAT08872.1|  247|Tribolium castaneum ORF1p protein.         23   1.6  
EF592539-1|ABQ95985.1|  630|Tribolium castaneum beta-N-acetylglu...    23   2.1  
DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7 prot...    23   2.8  
AJ845189-1|CAH60166.1|  515|Tribolium castaneum putative esteras...    22   3.7  
AJ845188-1|CAH60165.1|  517|Tribolium castaneum putative esteras...    22   3.7  
AJ845187-1|CAH60164.1|  515|Tribolium castaneum esterase protein.      22   3.7  
AJ844897-1|CAH59956.1|  517|Tribolium castaneum esterase protein.      22   3.7  
AF260821-1|AAG02019.1|  134|Tribolium castaneum alpha-esterase l...    22   3.7  

>AY695256-1|AAW21973.1|  168|Tribolium castaneum ventral nerve cord
           defective protein protein.
          Length = 168

 Score = 28.7 bits (61), Expect = 0.043
 Identities = 20/65 (30%), Positives = 28/65 (43%)
 Frame = -3

Query: 558 PQAQRFWIRRTRHAPRRAPSQPQPWPAYEQPLXIXCPTPRR*ASPVTVEPPRWQRDHPPC 379
           P   + W +  R+  +RA  +      ++Q      P+PRR A PV V      RD  PC
Sbjct: 81  PTQVKIWFQNHRYKTKRAQHEKG---MHDQQNNNPLPSPRRVAVPVLV------RDGKPC 131

Query: 378 WCGSP 364
             G P
Sbjct: 132 LSGGP 136


>AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.
          Length = 712

 Score = 27.1 bits (57), Expect = 0.13
 Identities = 13/26 (50%), Positives = 17/26 (65%)
 Frame = +2

Query: 218 ESEVAALQPTYPTAGGGPREVRGASR 295
           +SE A +Q T+P+ GGGPR   G  R
Sbjct: 56  QSEHAVIQ-THPSIGGGPRFSSGVGR 80


>AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.
          Length = 717

 Score = 27.1 bits (57), Expect = 0.13
 Identities = 13/26 (50%), Positives = 17/26 (65%)
 Frame = +2

Query: 218 ESEVAALQPTYPTAGGGPREVRGASR 295
           +SE A +Q T+P+ GGGPR   G  R
Sbjct: 56  QSEHAVIQ-THPSIGGGPRFSSGVGR 80


>AY531877-1|AAT08872.1|  247|Tribolium castaneum ORF1p protein.
          Length = 247

 Score = 23.4 bits (48), Expect = 1.6
 Identities = 10/34 (29%), Positives = 21/34 (61%)
 Frame = +3

Query: 327 QAADESERIRKALENRTNMEDDRVAILEAQLSQA 428
           QA   +  +++A+  + +  D+R+A ++AQL  A
Sbjct: 54  QAPKLNAEVKRAITQQHSERDERLAHVQAQLGAA 87


>EF592539-1|ABQ95985.1|  630|Tribolium castaneum
           beta-N-acetylglucosaminidase FDL protein.
          Length = 630

 Score = 23.0 bits (47), Expect = 2.1
 Identities = 10/26 (38%), Positives = 13/26 (50%)
 Frame = -3

Query: 408 PRWQRDHPPCWCGSPAPCVFARIHRR 331
           PR ++ HPP W      C+  R  RR
Sbjct: 46  PRQKKSHPPQWTWQ---CINQRCERR 68


>DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7
           protein.
          Length = 980

 Score = 22.6 bits (46), Expect = 2.8
 Identities = 12/39 (30%), Positives = 18/39 (46%)
 Frame = +2

Query: 209 EEAESEVAALQPTYPTAGGGPREVRGASRDRHRQAVRGQ 325
           ++    V   Q  YP  G    E+RG SR ++ + V  Q
Sbjct: 432 DDFSGTVCGGQVKYPLIGAMREELRGISRGKNAKDVDWQ 470


>AJ845189-1|CAH60166.1|  515|Tribolium castaneum putative esterase
           protein.
          Length = 515

 Score = 22.2 bits (45), Expect = 3.7
 Identities = 8/20 (40%), Positives = 9/20 (45%)
 Frame = -3

Query: 522 HAPRRAPSQPQPWPAYEQPL 463
           H   +AP  PQPW      L
Sbjct: 39  HLRFKAPQAPQPWTGIRDAL 58


>AJ845188-1|CAH60165.1|  517|Tribolium castaneum putative esterase
           protein.
          Length = 517

 Score = 22.2 bits (45), Expect = 3.7
 Identities = 8/20 (40%), Positives = 9/20 (45%)
 Frame = -3

Query: 522 HAPRRAPSQPQPWPAYEQPL 463
           H   +AP  PQPW      L
Sbjct: 41  HLRFKAPQAPQPWTGIRDAL 60


>AJ845187-1|CAH60164.1|  515|Tribolium castaneum esterase protein.
          Length = 515

 Score = 22.2 bits (45), Expect = 3.7
 Identities = 8/20 (40%), Positives = 9/20 (45%)
 Frame = -3

Query: 522 HAPRRAPSQPQPWPAYEQPL 463
           H   +AP  PQPW      L
Sbjct: 39  HLRFKAPQAPQPWTGIRDAL 58


>AJ844897-1|CAH59956.1|  517|Tribolium castaneum esterase protein.
          Length = 517

 Score = 22.2 bits (45), Expect = 3.7
 Identities = 8/20 (40%), Positives = 9/20 (45%)
 Frame = -3

Query: 522 HAPRRAPSQPQPWPAYEQPL 463
           H   +AP  PQPW      L
Sbjct: 41  HLRFKAPQAPQPWTGIRDAL 60


>AF260821-1|AAG02019.1|  134|Tribolium castaneum alpha-esterase like
           protein E2 protein.
          Length = 134

 Score = 22.2 bits (45), Expect = 3.7
 Identities = 8/20 (40%), Positives = 9/20 (45%)
 Frame = -3

Query: 522 HAPRRAPSQPQPWPAYEQPL 463
           H   +AP  PQPW      L
Sbjct: 13  HLRFKAPQAPQPWTGIRDAL 32


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 107,189
Number of Sequences: 336
Number of extensions: 2101
Number of successful extensions: 11
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 16397237
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

- SilkBase 1999-2023 -