Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP02_F_N12
         (635 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcript...    31   0.040
AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein.    26   0.87 
AF117750-1|AAD38336.1|  380|Anopheles gambiae serine protease 18...    23   8.1  

>AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1248

 Score = 30.7 bits (66), Expect = 0.040
 Identities = 14/33 (42%), Positives = 20/33 (60%)
 Frame = -3

Query: 615 PXPVRLPEISGCYQRHGAPPQAQRFWIRRTRHA 517
           P P+ + E + C+QR+ A P+A R  IRR   A
Sbjct: 842 PHPLLIKEDARCHQRYLADPEASRAVIRREERA 874


>AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein.
          Length = 1376

 Score = 26.2 bits (55), Expect = 0.87
 Identities = 21/76 (27%), Positives = 36/76 (47%)
 Frame = +3

Query: 342 SERIRKALENRTNMEDDRVAILEAQLSQAKLIAEESDXKYXEVARKLAMVEADLXXXXXX 521
           +ER +K LE +   E+ R+  L+    + K   EES+ K   + R+   VEA L      
Sbjct: 396 NERRKKTLE-QIAAEEKRLLELQDVPKKNKKEIEESEAKIESLTRQKTEVEAKLTANLAT 454

Query: 522 XXXXXXKIVELEEELR 569
                  ++E +E+L+
Sbjct: 455 LKDETKVLLEEKEKLQ 470


>AF117750-1|AAD38336.1|  380|Anopheles gambiae serine protease 18D
           protein.
          Length = 380

 Score = 23.0 bits (47), Expect = 8.1
 Identities = 6/18 (33%), Positives = 10/18 (55%)
 Frame = -3

Query: 375 CGSPAPCVFARIHRRPGW 322
           CGS  P ++ ++H    W
Sbjct: 356 CGSSTPAIYTKVHPYLDW 373


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 496,015
Number of Sequences: 2352
Number of extensions: 9419
Number of successful extensions: 23
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 62305095
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)