Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP02_F_N12
(635 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
D38542-1|BAA07545.1| 256|Caenorhabditis elegans CeTMIII protein. 134 7e-32
D38539-3|BAA07542.1| 256|Caenorhabditis elegans CeTMIII protein. 134 7e-32
AL132877-5|CAD45604.1| 256|Caenorhabditis elegans Hypothetical ... 134 7e-32
D38541-1|BAA07544.1| 284|Caenorhabditis elegans CeTMII protein. 132 2e-31
D38540-1|BAA07543.1| 284|Caenorhabditis elegans CeTMI protein. 132 2e-31
D38539-2|BAA07541.1| 284|Caenorhabditis elegans CeTMII protein. 132 2e-31
D38539-1|BAA07540.1| 284|Caenorhabditis elegans CeTMI protein. 132 2e-31
AL132877-4|CAC70112.1| 284|Caenorhabditis elegans Hypothetical ... 132 2e-31
AL132877-1|CAC70114.1| 284|Caenorhabditis elegans Hypothetical ... 132 2e-31
AL132877-2|CAC70113.2| 193|Caenorhabditis elegans Hypothetical ... 132 2e-31
AL132877-3|CAC70115.1| 256|Caenorhabditis elegans Hypothetical ... 124 7e-29
AF298180-1|AAG10302.1| 256|Caenorhabditis elegans tropomyosin i... 124 7e-29
Z69360-4|CAC42291.2| 732|Caenorhabditis elegans Hypothetical pr... 38 0.006
Z69360-3|CAA93286.2| 369|Caenorhabditis elegans Hypothetical pr... 38 0.006
Z69360-2|CAA93285.2| 780|Caenorhabditis elegans Hypothetical pr... 38 0.006
Z81518-1|CAB04214.3| 601|Caenorhabditis elegans Hypothetical pr... 34 0.074
AL132877-6|CAE54913.1| 151|Caenorhabditis elegans Hypothetical ... 30 1.2
U39852-7|AAK39260.1| 240|Caenorhabditis elegans Ground-like (gr... 27 1.3
U64857-2|AAC25867.1| 1558|Caenorhabditis elegans Hypothetical pr... 30 1.6
U64857-1|AAC25868.1| 2167|Caenorhabditis elegans Hypothetical pr... 30 1.6
AC006627-3|AAK85461.1| 504|Caenorhabditis elegans Hypothetical ... 29 2.1
Z66514-5|CAA91344.1| 1133|Caenorhabditis elegans Hypothetical pr... 29 2.8
Z34801-9|CAA84332.1| 1133|Caenorhabditis elegans Hypothetical pr... 29 2.8
AF016448-12|AAB65959.1| 316|Caenorhabditis elegans Hypothetical... 29 2.8
X74838-1|CAA52832.1| 231|Caenorhabditis elegans cuticlin 2 prot... 24 3.6
Z81088-5|CAB03133.1| 215|Caenorhabditis elegans Hypothetical pr... 24 3.6
Z68219-2|CAA92476.1| 300|Caenorhabditis elegans Hypothetical pr... 29 3.7
AY130758-3|AAN61519.1| 10578|Caenorhabditis elegans 1MDa_1 prote... 29 3.7
AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 prote... 29 3.7
AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 prote... 29 3.7
AF003150-3|AAB54214.1| 208|Caenorhabditis elegans Collagen prot... 29 3.7
Z81063-6|CAB02957.2| 296|Caenorhabditis elegans Hypothetical pr... 28 4.9
U41543-12|AAZ91345.1| 401|Caenorhabditis elegans Groundhog (hed... 28 4.9
Z83107-10|CAB05505.1| 1963|Caenorhabditis elegans Hypothetical p... 28 6.4
Z81499-3|CAB04089.1| 1963|Caenorhabditis elegans Hypothetical pr... 28 6.4
J01050-1|AAA28124.1| 1966|Caenorhabditis elegans myosin heavy ch... 28 6.4
Z81479-11|CAB03937.2| 1441|Caenorhabditis elegans Hypothetical p... 27 8.5
Z73423-8|CAO82012.1| 1441|Caenorhabditis elegans Hypothetical pr... 27 8.5
Z46828-7|CAA86860.1| 311|Caenorhabditis elegans Hypothetical pr... 27 8.5
AL110501-1|CAB54509.1| 2129|Caenorhabditis elegans Hypothetical ... 27 8.5
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 27 8.5
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 27 8.5
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 27 8.5
AC006620-1|AAF39780.1| 754|Caenorhabditis elegans Hypothetical ... 27 8.5
>D38542-1|BAA07545.1| 256|Caenorhabditis elegans CeTMIII protein.
Length = 256
Score = 134 bits (323), Expect = 7e-32
Identities = 70/130 (53%), Positives = 89/130 (68%)
Frame = +3
Query: 240 NRRIQXXXXXXXXXXXXXATATAKLSEASQAADESERIRKALENRTNMEDDRVAILEAQL 419
NRRI TAT+KL +A++AADE++R RK++E R+ +++R LE Q+
Sbjct: 61 NRRIVLVEEDLERTEDRLKTATSKLEQATKAADEADRARKSMETRSQQDEERANFLETQV 120
Query: 420 SQAKLIAEESDXKYXEVARKLAMVEADLXXXXXXXXXXXXKIVELEEELRVVGNNLKSLE 599
+AK+IAE++D KY EVARKLAMVEADL KIVELEEELRVVGNNLKSLE
Sbjct: 121 DEAKVIAEDADRKYEEVARKLAMVEADLERAEERAEAGENKIVELEEELRVVGNNLKSLE 180
Query: 600 VSQXKATKRE 629
VS+ KA +RE
Sbjct: 181 VSEEKALQRE 190
Score = 43.2 bits (97), Expect = 2e-04
Identities = 23/51 (45%), Positives = 31/51 (60%)
Frame = +2
Query: 86 QQGTILDVLKKKMRQTXXXXXXXXXXXXXYHKRLQVEIMRREEAESEVAAL 238
QQ ++LDVLKKKMRQ ++L+ E +RE+AE+EVAAL
Sbjct: 10 QQTSLLDVLKKKMRQAREEAEAAKDEADEVKRQLEEERKKREDAEAEVAAL 60
>D38539-3|BAA07542.1| 256|Caenorhabditis elegans CeTMIII protein.
Length = 256
Score = 134 bits (323), Expect = 7e-32
Identities = 70/130 (53%), Positives = 89/130 (68%)
Frame = +3
Query: 240 NRRIQXXXXXXXXXXXXXATATAKLSEASQAADESERIRKALENRTNMEDDRVAILEAQL 419
NRRI TAT+KL +A++AADE++R RK++E R+ +++R LE Q+
Sbjct: 61 NRRIVLVEEDLERTEDRLKTATSKLEQATKAADEADRARKSMETRSQQDEERANFLETQV 120
Query: 420 SQAKLIAEESDXKYXEVARKLAMVEADLXXXXXXXXXXXXKIVELEEELRVVGNNLKSLE 599
+AK+IAE++D KY EVARKLAMVEADL KIVELEEELRVVGNNLKSLE
Sbjct: 121 DEAKVIAEDADRKYEEVARKLAMVEADLERAEERAEAGENKIVELEEELRVVGNNLKSLE 180
Query: 600 VSQXKATKRE 629
VS+ KA +RE
Sbjct: 181 VSEEKALQRE 190
Score = 43.2 bits (97), Expect = 2e-04
Identities = 23/51 (45%), Positives = 31/51 (60%)
Frame = +2
Query: 86 QQGTILDVLKKKMRQTXXXXXXXXXXXXXYHKRLQVEIMRREEAESEVAAL 238
QQ ++LDVLKKKMRQ ++L+ E +RE+AE+EVAAL
Sbjct: 10 QQTSLLDVLKKKMRQAREEAEAAKDEADEVKRQLEEERKKREDAEAEVAAL 60
>AL132877-5|CAD45604.1| 256|Caenorhabditis elegans Hypothetical
protein Y105E8B.1e protein.
Length = 256
Score = 134 bits (323), Expect = 7e-32
Identities = 70/130 (53%), Positives = 89/130 (68%)
Frame = +3
Query: 240 NRRIQXXXXXXXXXXXXXATATAKLSEASQAADESERIRKALENRTNMEDDRVAILEAQL 419
NRRI TAT+KL +A++AADE++R RK++E R+ +++R LE Q+
Sbjct: 61 NRRIVLVEEDLERTEDRLKTATSKLEQATKAADEADRARKSMETRSQQDEERANFLETQV 120
Query: 420 SQAKLIAEESDXKYXEVARKLAMVEADLXXXXXXXXXXXXKIVELEEELRVVGNNLKSLE 599
+AK+IAE++D KY EVARKLAMVEADL KIVELEEELRVVGNNLKSLE
Sbjct: 121 DEAKVIAEDADRKYEEVARKLAMVEADLERAEERAEAGENKIVELEEELRVVGNNLKSLE 180
Query: 600 VSQXKATKRE 629
VS+ KA +RE
Sbjct: 181 VSEEKALQRE 190
Score = 43.2 bits (97), Expect = 2e-04
Identities = 23/51 (45%), Positives = 31/51 (60%)
Frame = +2
Query: 86 QQGTILDVLKKKMRQTXXXXXXXXXXXXXYHKRLQVEIMRREEAESEVAAL 238
QQ ++LDVLKKKMRQ ++L+ E +RE+AE+EVAAL
Sbjct: 10 QQTSLLDVLKKKMRQAREEAEAAKDEADEVKRQLEEERKKREDAEAEVAAL 60
>D38541-1|BAA07544.1| 284|Caenorhabditis elegans CeTMII protein.
Length = 284
Score = 132 bits (320), Expect = 2e-31
Identities = 71/130 (54%), Positives = 86/130 (66%)
Frame = +3
Query: 240 NRRIQXXXXXXXXXXXXXATATAKLSEASQAADESERIRKALENRTNMEDDRVAILEAQL 419
NRR+ AT KL EA+ DESER+RK +ENR+ +++R +EAQL
Sbjct: 89 NRRMTLLEEELERAEERLKIATEKLEEATHNVDESERVRKVMENRSLQDEERANTVEAQL 148
Query: 420 SQAKLIAEESDXKYXEVARKLAMVEADLXXXXXXXXXXXXKIVELEEELRVVGNNLKSLE 599
+A+L+AEE+D KY EVARKLAMVEADL KIVELEEELRVVGNNLKSLE
Sbjct: 149 KEAQLLAEEADRKYDEVARKLAMVEADLERAEERAEAGENKIVELEEELRVVGNNLKSLE 208
Query: 600 VSQXKATKRE 629
VS+ KA +RE
Sbjct: 209 VSEEKALQRE 218
>D38540-1|BAA07543.1| 284|Caenorhabditis elegans CeTMI protein.
Length = 284
Score = 132 bits (320), Expect = 2e-31
Identities = 71/130 (54%), Positives = 86/130 (66%)
Frame = +3
Query: 240 NRRIQXXXXXXXXXXXXXATATAKLSEASQAADESERIRKALENRTNMEDDRVAILEAQL 419
NRR+ AT KL EA+ DESER+RK +ENR+ +++R +EAQL
Sbjct: 89 NRRMTLLEEELERAEERLKIATEKLEEATHNVDESERVRKVMENRSLQDEERANTVEAQL 148
Query: 420 SQAKLIAEESDXKYXEVARKLAMVEADLXXXXXXXXXXXXKIVELEEELRVVGNNLKSLE 599
+A+L+AEE+D KY EVARKLAMVEADL KIVELEEELRVVGNNLKSLE
Sbjct: 149 KEAQLLAEEADRKYDEVARKLAMVEADLERAEERAEAGENKIVELEEELRVVGNNLKSLE 208
Query: 600 VSQXKATKRE 629
VS+ KA +RE
Sbjct: 209 VSEEKALQRE 218
>D38539-2|BAA07541.1| 284|Caenorhabditis elegans CeTMII protein.
Length = 284
Score = 132 bits (320), Expect = 2e-31
Identities = 71/130 (54%), Positives = 86/130 (66%)
Frame = +3
Query: 240 NRRIQXXXXXXXXXXXXXATATAKLSEASQAADESERIRKALENRTNMEDDRVAILEAQL 419
NRR+ AT KL EA+ DESER+RK +ENR+ +++R +EAQL
Sbjct: 89 NRRMTLLEEELERAEERLKIATEKLEEATHNVDESERVRKVMENRSLQDEERANTVEAQL 148
Query: 420 SQAKLIAEESDXKYXEVARKLAMVEADLXXXXXXXXXXXXKIVELEEELRVVGNNLKSLE 599
+A+L+AEE+D KY EVARKLAMVEADL KIVELEEELRVVGNNLKSLE
Sbjct: 149 KEAQLLAEEADRKYDEVARKLAMVEADLERAEERAEAGENKIVELEEELRVVGNNLKSLE 208
Query: 600 VSQXKATKRE 629
VS+ KA +RE
Sbjct: 209 VSEEKALQRE 218
>D38539-1|BAA07540.1| 284|Caenorhabditis elegans CeTMI protein.
Length = 284
Score = 132 bits (320), Expect = 2e-31
Identities = 71/130 (54%), Positives = 86/130 (66%)
Frame = +3
Query: 240 NRRIQXXXXXXXXXXXXXATATAKLSEASQAADESERIRKALENRTNMEDDRVAILEAQL 419
NRR+ AT KL EA+ DESER+RK +ENR+ +++R +EAQL
Sbjct: 89 NRRMTLLEEELERAEERLKIATEKLEEATHNVDESERVRKVMENRSLQDEERANTVEAQL 148
Query: 420 SQAKLIAEESDXKYXEVARKLAMVEADLXXXXXXXXXXXXKIVELEEELRVVGNNLKSLE 599
+A+L+AEE+D KY EVARKLAMVEADL KIVELEEELRVVGNNLKSLE
Sbjct: 149 KEAQLLAEEADRKYDEVARKLAMVEADLERAEERAEAGENKIVELEEELRVVGNNLKSLE 208
Query: 600 VSQXKATKRE 629
VS+ KA +RE
Sbjct: 209 VSEEKALQRE 218
>AL132877-4|CAC70112.1| 284|Caenorhabditis elegans Hypothetical
protein Y105E8B.1d protein.
Length = 284
Score = 132 bits (320), Expect = 2e-31
Identities = 71/130 (54%), Positives = 86/130 (66%)
Frame = +3
Query: 240 NRRIQXXXXXXXXXXXXXATATAKLSEASQAADESERIRKALENRTNMEDDRVAILEAQL 419
NRR+ AT KL EA+ DESER+RK +ENR+ +++R +EAQL
Sbjct: 89 NRRMTLLEEELERAEERLKIATEKLEEATHNVDESERVRKVMENRSLQDEERANTVEAQL 148
Query: 420 SQAKLIAEESDXKYXEVARKLAMVEADLXXXXXXXXXXXXKIVELEEELRVVGNNLKSLE 599
+A+L+AEE+D KY EVARKLAMVEADL KIVELEEELRVVGNNLKSLE
Sbjct: 149 KEAQLLAEEADRKYDEVARKLAMVEADLERAEERAEAGENKIVELEEELRVVGNNLKSLE 208
Query: 600 VSQXKATKRE 629
VS+ KA +RE
Sbjct: 209 VSEEKALQRE 218
>AL132877-1|CAC70114.1| 284|Caenorhabditis elegans Hypothetical
protein Y105E8B.1a protein.
Length = 284
Score = 132 bits (320), Expect = 2e-31
Identities = 71/130 (54%), Positives = 86/130 (66%)
Frame = +3
Query: 240 NRRIQXXXXXXXXXXXXXATATAKLSEASQAADESERIRKALENRTNMEDDRVAILEAQL 419
NRR+ AT KL EA+ DESER+RK +ENR+ +++R +EAQL
Sbjct: 89 NRRMTLLEEELERAEERLKIATEKLEEATHNVDESERVRKVMENRSLQDEERANTVEAQL 148
Query: 420 SQAKLIAEESDXKYXEVARKLAMVEADLXXXXXXXXXXXXKIVELEEELRVVGNNLKSLE 599
+A+L+AEE+D KY EVARKLAMVEADL KIVELEEELRVVGNNLKSLE
Sbjct: 149 KEAQLLAEEADRKYDEVARKLAMVEADLERAEERAEAGENKIVELEEELRVVGNNLKSLE 208
Query: 600 VSQXKATKRE 629
VS+ KA +RE
Sbjct: 209 VSEEKALQRE 218
>AL132877-2|CAC70113.2| 193|Caenorhabditis elegans Hypothetical
protein Y105E8B.1b protein.
Length = 193
Score = 132 bits (319), Expect = 2e-31
Identities = 68/110 (61%), Positives = 82/110 (74%)
Frame = +3
Query: 300 ATAKLSEASQAADESERIRKALENRTNMEDDRVAILEAQLSQAKLIAEESDXKYXEVARK 479
AT KL EA+ DESER+RK +ENR+ +++R +EAQL +A+L+AEE+D KY EVARK
Sbjct: 18 ATEKLEEATHNVDESERVRKVMENRSLQDEERANTVEAQLKEAQLLAEEADRKYDEVARK 77
Query: 480 LAMVEADLXXXXXXXXXXXXKIVELEEELRVVGNNLKSLEVSQXKATKRE 629
LAMVEADL KIVELEEELRVVGNNLKSLEVS+ KA +RE
Sbjct: 78 LAMVEADLERAEERAEAGENKIVELEEELRVVGNNLKSLEVSEEKALQRE 127
>AL132877-3|CAC70115.1| 256|Caenorhabditis elegans Hypothetical
protein Y105E8B.1c protein.
Length = 256
Score = 124 bits (298), Expect = 7e-29
Identities = 68/130 (52%), Positives = 86/130 (66%)
Frame = +3
Query: 240 NRRIQXXXXXXXXXXXXXATATAKLSEASQAADESERIRKALENRTNMEDDRVAILEAQL 419
NRRI TAT+KL +A++AADE++R R+AL N+ +M+DDR + LE +L
Sbjct: 61 NRRIVLVEEDLERTEDRLKTATSKLEQATKAADEADRSRRALSNQIDMDDDRCSDLERKL 120
Query: 420 SQAKLIAEESDXKYXEVARKLAMVEADLXXXXXXXXXXXXKIVELEEELRVVGNNLKSLE 599
+ + I E++ K EVARKLAMVEADL KIVELEEELRVVGNNLKSLE
Sbjct: 121 RECQSILHETENKAEEVARKLAMVEADLERAEERAEAGENKIVELEEELRVVGNNLKSLE 180
Query: 600 VSQXKATKRE 629
VS+ KA +RE
Sbjct: 181 VSEEKALQRE 190
Score = 43.2 bits (97), Expect = 2e-04
Identities = 23/51 (45%), Positives = 31/51 (60%)
Frame = +2
Query: 86 QQGTILDVLKKKMRQTXXXXXXXXXXXXXYHKRLQVEIMRREEAESEVAAL 238
QQ ++LDVLKKKMRQ ++L+ E +RE+AE+EVAAL
Sbjct: 10 QQTSLLDVLKKKMRQAREEAEAAKDEADEVKRQLEEERKKREDAEAEVAAL 60
>AF298180-1|AAG10302.1| 256|Caenorhabditis elegans tropomyosin
isoform IV protein.
Length = 256
Score = 124 bits (298), Expect = 7e-29
Identities = 68/130 (52%), Positives = 86/130 (66%)
Frame = +3
Query: 240 NRRIQXXXXXXXXXXXXXATATAKLSEASQAADESERIRKALENRTNMEDDRVAILEAQL 419
NRRI TAT+KL +A++AADE++R R+AL N+ +M+DDR + LE +L
Sbjct: 61 NRRIVLVEEDLERTEDRLKTATSKLEQATKAADEADRSRRALSNQIDMDDDRCSDLERKL 120
Query: 420 SQAKLIAEESDXKYXEVARKLAMVEADLXXXXXXXXXXXXKIVELEEELRVVGNNLKSLE 599
+ + I E++ K EVARKLAMVEADL KIVELEEELRVVGNNLKSLE
Sbjct: 121 RECQSILHETENKAEEVARKLAMVEADLERAEERAEAGENKIVELEEELRVVGNNLKSLE 180
Query: 600 VSQXKATKRE 629
VS+ KA +RE
Sbjct: 181 VSEEKALQRE 190
Score = 43.2 bits (97), Expect = 2e-04
Identities = 23/51 (45%), Positives = 31/51 (60%)
Frame = +2
Query: 86 QQGTILDVLKKKMRQTXXXXXXXXXXXXXYHKRLQVEIMRREEAESEVAAL 238
QQ ++LDVLKKKMRQ ++L+ E +RE+AE+EVAAL
Sbjct: 10 QQTSLLDVLKKKMRQAREEAEAAKDEADEVKRQLEEERKKREDAEAEVAAL 60
>Z69360-4|CAC42291.2| 732|Caenorhabditis elegans Hypothetical
protein F25H8.5c protein.
Length = 732
Score = 37.9 bits (84), Expect = 0.006
Identities = 33/124 (26%), Positives = 48/124 (38%), Gaps = 1/124 (0%)
Frame = -3
Query: 615 PXPVRLPEISGCYQRHGAPPQAQRFWIRRTRHAPRRAPSQPQPWPAYEQPLXIXCPTPRR 436
P P P + C G PP Q++ + R P QPQP P Y Q P+PR
Sbjct: 90 PTPGPPPPRNNCLPPPGPPPPCQQYQQPQPPPCQRPQPPQPQPQP-YPQRTGGCLPSPR- 147
Query: 435 *ASPVTVEPPRWQRDHPPCWCGSPAPCVFARIHRRP-GWPRTAWRWRSRDAPRTSRGPPP 259
+PP+ Q+ P C +++ +P P+ R + PR + G P
Sbjct: 148 -GYENQPQPPQPQQQQYPQPQPQRGGCTYSQPQPQPQQQPQPPCYQRQPEPPRQTGGCLP 206
Query: 258 AVGY 247
Y
Sbjct: 207 GPYY 210
>Z69360-3|CAA93286.2| 369|Caenorhabditis elegans Hypothetical
protein F25H8.5b protein.
Length = 369
Score = 37.9 bits (84), Expect = 0.006
Identities = 33/124 (26%), Positives = 48/124 (38%), Gaps = 1/124 (0%)
Frame = -3
Query: 615 PXPVRLPEISGCYQRHGAPPQAQRFWIRRTRHAPRRAPSQPQPWPAYEQPLXIXCPTPRR 436
P P P + C G PP Q++ + R P QPQP P Y Q P+PR
Sbjct: 90 PTPGPPPPRNNCLPPPGPPPPCQQYQQPQPPPCQRPQPPQPQPQP-YPQRTGGCLPSPR- 147
Query: 435 *ASPVTVEPPRWQRDHPPCWCGSPAPCVFARIHRRP-GWPRTAWRWRSRDAPRTSRGPPP 259
+PP+ Q+ P C +++ +P P+ R + PR + G P
Sbjct: 148 -GYENQPQPPQPQQQQYPQPQPQRGGCTYSQPQPQPQQQPQPPCYQRQPEPPRQTGGCLP 206
Query: 258 AVGY 247
Y
Sbjct: 207 GPYY 210
>Z69360-2|CAA93285.2| 780|Caenorhabditis elegans Hypothetical
protein F25H8.5a protein.
Length = 780
Score = 37.9 bits (84), Expect = 0.006
Identities = 33/124 (26%), Positives = 48/124 (38%), Gaps = 1/124 (0%)
Frame = -3
Query: 615 PXPVRLPEISGCYQRHGAPPQAQRFWIRRTRHAPRRAPSQPQPWPAYEQPLXIXCPTPRR 436
P P P + C G PP Q++ + R P QPQP P Y Q P+PR
Sbjct: 90 PTPGPPPPRNNCLPPPGPPPPCQQYQQPQPPPCQRPQPPQPQPQP-YPQRTGGCLPSPR- 147
Query: 435 *ASPVTVEPPRWQRDHPPCWCGSPAPCVFARIHRRP-GWPRTAWRWRSRDAPRTSRGPPP 259
+PP+ Q+ P C +++ +P P+ R + PR + G P
Sbjct: 148 -GYENQPQPPQPQQQQYPQPQPQRGGCTYSQPQPQPQQQPQPPCYQRQPEPPRQTGGCLP 206
Query: 258 AVGY 247
Y
Sbjct: 207 GPYY 210
>Z81518-1|CAB04214.3| 601|Caenorhabditis elegans Hypothetical
protein F28D9.1 protein.
Length = 601
Score = 34.3 bits (75), Expect = 0.074
Identities = 31/95 (32%), Positives = 42/95 (44%), Gaps = 8/95 (8%)
Frame = -3
Query: 519 APRRAPSQPQPWPAYEQ---PLXIXCPTPRR*ASPV-TVEPPRWQRDHPPCWCGSP---- 364
AP+RA S+ + PA + P P PRR SP + + PR +R SP
Sbjct: 423 APKRAKSRSKSPPAPRRRRSPSQSKSPAPRRRRSPSKSPQAPRRRRSPSGSKSRSPRRRR 482
Query: 363 APCVFARIHRRPGWPRTAWRWRSRDAPRTSRGPPP 259
+P R + P R+ R RS + SR PPP
Sbjct: 483 SPAAAPRRRQSPQRRRSPRRRRSPSSSSRSRSPPP 517
Score = 29.1 bits (62), Expect = 2.8
Identities = 26/102 (25%), Positives = 37/102 (36%)
Frame = -3
Query: 564 APPQAQRFWIRRTRHAPRRAPSQPQPWPAYEQPLXIXCPTPRR*ASPVTVEPPRWQRDHP 385
+PP A + R++ P R P + P P+ R +P PP +R P
Sbjct: 356 SPPPAPKRAKSRSKSPPARRRRSPSASKSPPAPRRRRSPSKSRSPAPKREIPPARRRRSP 415
Query: 384 PCWCGSPAPCVFARIHRRPGWPRTAWRWRSRDAPRTSRGPPP 259
PAP + P P R R +P S+ P P
Sbjct: 416 SASKSPPAPKRAKSRSKSPPAP------RRRRSPSQSKSPAP 451
Score = 28.3 bits (60), Expect = 4.9
Identities = 34/126 (26%), Positives = 48/126 (38%)
Frame = -3
Query: 588 SGCYQRHGAPPQAQRFWIRRTRHAPRRAPSQPQPWPAYEQPLXIXCPTPRR*ASPVTVEP 409
SG +R +P ++ R R +P ++ S P P A + P RR + + P
Sbjct: 299 SGSPRRRRSPSASKSPPPARRRRSPSQSKS-PAPKRAKSRSKSPPAPARRRRSPSASKSP 357
Query: 408 PRWQRDHPPCWCGSPAPCVFARIHRRPGWPRTAWRWRSRDAPRTSRGPPPAVGYVGCRAA 229
P P S + AR R P ++ R R +P SR P P R
Sbjct: 358 PP-----APKRAKSRSKSPPARRRRSPSASKSPPAPRRRRSPSKSRSPAPKREIPPARRR 412
Query: 228 TSDSAS 211
S SAS
Sbjct: 413 RSPSAS 418
>AL132877-6|CAE54913.1| 151|Caenorhabditis elegans Hypothetical
protein Y105E8B.1f protein.
Length = 151
Score = 30.3 bits (65), Expect = 1.2
Identities = 15/27 (55%), Positives = 16/27 (59%)
Frame = +1
Query: 451 TXNTKRLLVSWPWLRLTWSAPRSVPSP 531
T NT R VS PWL+L RSVP P
Sbjct: 107 TANTTRSPVSSPWLKLILRELRSVPRP 133
>U39852-7|AAK39260.1| 240|Caenorhabditis elegans Ground-like (grd
related) protein 6 protein.
Length = 240
Score = 27.1 bits (57), Expect(2) = 1.3
Identities = 15/45 (33%), Positives = 16/45 (35%)
Frame = -3
Query: 495 PQPWPAYEQPLXIXCPTPRR*ASPVTVEPPRWQRDHPPCWCGSPA 361
P P PA P CP P P PP R PC P+
Sbjct: 57 PPPCPAQFCPPPPICPPPPPPPMPCPPPPPPMPRPSCPCMMQRPS 101
Score = 21.8 bits (44), Expect(2) = 1.3
Identities = 6/16 (37%), Positives = 9/16 (56%)
Frame = -3
Query: 381 CWCGSPAPCVFARIHR 334
C CG +PC + + R
Sbjct: 142 CCCGCSSPCKYKSVRR 157
>U64857-2|AAC25867.1| 1558|Caenorhabditis elegans Hypothetical protein
C37C3.6a protein.
Length = 1558
Score = 29.9 bits (64), Expect = 1.6
Identities = 24/64 (37%), Positives = 30/64 (46%)
Frame = -3
Query: 582 CYQRHGAPPQAQRFWIRRTRHAPRRAPSQPQPWPAYEQPLXIXCPTPRR*ASPVTVEPPR 403
C+ HGA P A R + + P P+QP QP I P P++ ASPV V
Sbjct: 1321 CFFVHGAQPSAAR----QEQAQPAAQPAQPA------QPSNIVSP-PQQSASPVVVPSNS 1369
Query: 402 WQRD 391
QRD
Sbjct: 1370 KQRD 1373
>U64857-1|AAC25868.1| 2167|Caenorhabditis elegans Hypothetical protein
C37C3.6b protein.
Length = 2167
Score = 29.9 bits (64), Expect = 1.6
Identities = 24/64 (37%), Positives = 30/64 (46%)
Frame = -3
Query: 582 CYQRHGAPPQAQRFWIRRTRHAPRRAPSQPQPWPAYEQPLXIXCPTPRR*ASPVTVEPPR 403
C+ HGA P A R + + P P+QP QP I P P++ ASPV V
Sbjct: 1321 CFFVHGAQPSAAR----QEQAQPAAQPAQPA------QPSNIVSP-PQQSASPVVVPSNS 1369
Query: 402 WQRD 391
QRD
Sbjct: 1370 KQRD 1373
>AC006627-3|AAK85461.1| 504|Caenorhabditis elegans Hypothetical
protein E01A2.4 protein.
Length = 504
Score = 29.5 bits (63), Expect = 2.1
Identities = 29/88 (32%), Positives = 36/88 (40%), Gaps = 4/88 (4%)
Frame = -3
Query: 633 SXPFSSPXPVRLPEISGCYQRHG-APPQAQRFWIRRTRHAPRRAPSQPQPWPAYEQPLXI 457
S P P+R P S +R +P + R RRTR R+PS P+ P+
Sbjct: 75 SPPKRKREPIRAPSASPPRRRRDDSPRKRSRSPPRRTR----RSPSPPRRRRISRSPVRR 130
Query: 456 XCPTPRR*ASPVTVEPPRWQ---RDHPP 382
PRR S PPR Q R PP
Sbjct: 131 SRSPPRRQVSRSRSPPPRRQQRSRSPPP 158
Score = 27.5 bits (58), Expect = 8.5
Identities = 20/62 (32%), Positives = 30/62 (48%), Gaps = 4/62 (6%)
Frame = -3
Query: 576 QRHGAPPQAQRFW---IRRTRHAPRRAPSQPQ-PWPAYEQPLXIXCPTPRR*ASPVTVEP 409
+R +PP+ +R +RR+R PRR S+ + P P +Q P RR + P
Sbjct: 112 RRSPSPPRRRRISRSPVRRSRSPPRRQVSRSRSPPPRRQQRSRSPPPAKRRRDQSRSKSP 171
Query: 408 PR 403
PR
Sbjct: 172 PR 173
>Z66514-5|CAA91344.1| 1133|Caenorhabditis elegans Hypothetical
protein F59A2.6 protein.
Length = 1133
Score = 29.1 bits (62), Expect = 2.8
Identities = 15/49 (30%), Positives = 26/49 (53%)
Frame = +3
Query: 300 ATAKLSEASQAADESERIRKALENRTNMEDDRVAILEAQLSQAKLIAEE 446
A+A+ A + E+++KA ++ + R LEA QAKL +E+
Sbjct: 821 ASAEKKIAKLTSQFEEKLKKAQNSQDEASESRFKTLEASAEQAKLESEQ 869
>Z34801-9|CAA84332.1| 1133|Caenorhabditis elegans Hypothetical
protein F59A2.6 protein.
Length = 1133
Score = 29.1 bits (62), Expect = 2.8
Identities = 15/49 (30%), Positives = 26/49 (53%)
Frame = +3
Query: 300 ATAKLSEASQAADESERIRKALENRTNMEDDRVAILEAQLSQAKLIAEE 446
A+A+ A + E+++KA ++ + R LEA QAKL +E+
Sbjct: 821 ASAEKKIAKLTSQFEEKLKKAQNSQDEASESRFKTLEASAEQAKLESEQ 869
>AF016448-12|AAB65959.1| 316|Caenorhabditis elegans Hypothetical
protein F41E6.11 protein.
Length = 316
Score = 29.1 bits (62), Expect = 2.8
Identities = 20/57 (35%), Positives = 25/57 (43%)
Frame = -3
Query: 525 RHAPRRAPSQPQPWPAYEQPLXIXCPTPRR*ASPVTVEPPRWQRDHPPCWCGSPAPC 355
++AP P P P PAY P P P P+ V PP + P C +P PC
Sbjct: 44 QYAPLPPPPMPAPAPAY-NPYPCANP-PCIVVEPMPVAPPAPAPAYNPYPCATP-PC 97
>X74838-1|CAA52832.1| 231|Caenorhabditis elegans cuticlin 2
protein.
Length = 231
Score = 23.8 bits (49), Expect(2) = 3.6
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = -3
Query: 375 CGSPAPCVFARIHRRPGWPRTA 310
CG PAPC A I G TA
Sbjct: 67 CGGPAPCAAAPIAAPAGGYATA 88
Score = 23.4 bits (48), Expect(2) = 3.6
Identities = 7/9 (77%), Positives = 8/9 (88%)
Frame = -3
Query: 387 PPCWCGSPA 361
PPC CG+PA
Sbjct: 36 PPCGCGAPA 44
>Z81088-5|CAB03133.1| 215|Caenorhabditis elegans Hypothetical
protein F53F1.5 protein.
Length = 215
Score = 23.8 bits (49), Expect(2) = 3.6
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = -3
Query: 375 CGSPAPCVFARIHRRPGWPRTA 310
CG PAPC A I G TA
Sbjct: 67 CGGPAPCAAAPIAAPAGGYATA 88
Score = 23.4 bits (48), Expect(2) = 3.6
Identities = 7/9 (77%), Positives = 8/9 (88%)
Frame = -3
Query: 387 PPCWCGSPA 361
PPC CG+PA
Sbjct: 36 PPCGCGAPA 44
>Z68219-2|CAA92476.1| 300|Caenorhabditis elegans Hypothetical
protein T05A1.2 protein.
Length = 300
Score = 28.7 bits (61), Expect = 3.7
Identities = 22/62 (35%), Positives = 27/62 (43%)
Frame = +2
Query: 239 QPTYPTAGGGPREVRGASRDRHRQAVRGQPGRR*IRANTQGAGEPHQHGG*SRCHLGGST 418
QP P GPR RG + + + G PG+ R G GEP Q G + L GS
Sbjct: 218 QPGQP-GRAGPRGPRGVAGIKGKDGAPGSPGQPGPRG---GPGEPGQDGAPGQPGLPGSD 273
Query: 419 VT 424
T
Sbjct: 274 GT 275
>AY130758-3|AAN61519.1| 10578|Caenorhabditis elegans 1MDa_1 protein
protein.
Length = 10578
Score = 28.7 bits (61), Expect = 3.7
Identities = 21/67 (31%), Positives = 30/67 (44%)
Frame = +3
Query: 297 TATAKLSEASQAADESERIRKALENRTNMEDDRVAILEAQLSQAKLIAEESDXKYXEVAR 476
+ T+K S ESE + A R E D LEA+++ K E+S + +
Sbjct: 9783 SVTSKTVVESGGPSESETQKVADAARKQKETDEKQKLEAEITAKKSADEKSKLEAESKLK 9842
Query: 477 KLAMVEA 497
K A VEA
Sbjct: 9843 KAAEVEA 9849
>AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 protein
protein.
Length = 18519
Score = 28.7 bits (61), Expect = 3.7
Identities = 21/67 (31%), Positives = 30/67 (44%)
Frame = +3
Query: 297 TATAKLSEASQAADESERIRKALENRTNMEDDRVAILEAQLSQAKLIAEESDXKYXEVAR 476
+ T+K S ESE + A R E D LEA+++ K E+S + +
Sbjct: 9803 SVTSKTVVESGGPSESETQKVADAARKQKETDEKQKLEAEITAKKSADEKSKLEAESKLK 9862
Query: 477 KLAMVEA 497
K A VEA
Sbjct: 9863 KAAEVEA 9869
Score = 28.7 bits (61), Expect = 3.7
Identities = 21/65 (32%), Positives = 29/65 (44%)
Frame = +3
Query: 303 TAKLSEASQAADESERIRKALENRTNMEDDRVAILEAQLSQAKLIAEESDXKYXEVARKL 482
T+K S ESE + A R E D LEA+++ K E+S + +K
Sbjct: 13438 TSKTVVESAGPSESETQKVADAARKQKETDEKQKLEAEITAKKSADEKSKLEAESKLKKA 13497
Query: 483 AMVEA 497
A VEA
Sbjct: 13498 AEVEA 13502
>AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 protein
protein.
Length = 18534
Score = 28.7 bits (61), Expect = 3.7
Identities = 21/67 (31%), Positives = 30/67 (44%)
Frame = +3
Query: 297 TATAKLSEASQAADESERIRKALENRTNMEDDRVAILEAQLSQAKLIAEESDXKYXEVAR 476
+ T+K S ESE + A R E D LEA+++ K E+S + +
Sbjct: 9803 SVTSKTVVESGGPSESETQKVADAARKQKETDEKQKLEAEITAKKSADEKSKLEAESKLK 9862
Query: 477 KLAMVEA 497
K A VEA
Sbjct: 9863 KAAEVEA 9869
Score = 28.7 bits (61), Expect = 3.7
Identities = 21/65 (32%), Positives = 29/65 (44%)
Frame = +3
Query: 303 TAKLSEASQAADESERIRKALENRTNMEDDRVAILEAQLSQAKLIAEESDXKYXEVARKL 482
T+K S ESE + A R E D LEA+++ K E+S + +K
Sbjct: 13438 TSKTVVESAGPSESETQKVADAARKQKETDEKQKLEAEITAKKSADEKSKLEAESKLKKA 13497
Query: 483 AMVEA 497
A VEA
Sbjct: 13498 AEVEA 13502
>AF003150-3|AAB54214.1| 208|Caenorhabditis elegans Collagen protein
55 protein.
Length = 208
Score = 28.7 bits (61), Expect = 3.7
Identities = 16/46 (34%), Positives = 20/46 (43%)
Frame = +2
Query: 251 PTAGGGPREVRGASRDRHRQAVRGQPGRR*IRANTQGAGEPHQHGG 388
P GP GA ++ V GQPG + G G+P Q GG
Sbjct: 103 PAGPPGPPGQPGAQGEQGHVEVSGQPGAPRPQGPAGGPGQPVQSGG 148
>Z81063-6|CAB02957.2| 296|Caenorhabditis elegans Hypothetical
protein F15D3.8 protein.
Length = 296
Score = 28.3 bits (60), Expect = 4.9
Identities = 20/58 (34%), Positives = 30/58 (51%), Gaps = 1/58 (1%)
Frame = +3
Query: 309 KLSEASQAADESERIRKALENRTNMEDDRVAILEAQLSQAKLIAE-ESDXKYXEVARK 479
K+ E +Q + E R++LEN M+D R IL + A LI + E + K E R+
Sbjct: 10 KMEEDAQRRHQ-ELNRQSLENAAEMKDSRRKILNKEFEGAILIKQVEHETKQVEKKRE 66
>U41543-12|AAZ91345.1| 401|Caenorhabditis elegans Groundhog
(hedgehog-like family)protein 7 protein.
Length = 401
Score = 28.3 bits (60), Expect = 4.9
Identities = 31/116 (26%), Positives = 47/116 (40%), Gaps = 17/116 (14%)
Frame = -3
Query: 579 YQRHGAPP--------QAQRFWIRRTRHA----PRRAPSQPQPWPAYEQPLXIXCPTPRR 436
Y H APP Q ++ +R +H+ PR +PQP+PA + + PT RR
Sbjct: 169 YIEHSAPPPQPQYPQQQPPQYPQQRQQHSYNAGPRTYHEEPQPYPAKFEYVDYPAPTTRR 228
Query: 435 *ASPVTVEPPRWQRDHPPCWCGSPA----PCVFARIHRRPGWP-RTAWRWRSRDAP 283
+ E ++ P P P +R RPGW T + + R+ P
Sbjct: 229 PYPYPSFEVLPHHEEYEPRSTRRPTTTEEPTTTSR-KPRPGWKGDTEYNYPERNLP 283
>Z83107-10|CAB05505.1| 1963|Caenorhabditis elegans Hypothetical
protein F11C3.3 protein.
Length = 1963
Score = 27.9 bits (59), Expect = 6.4
Identities = 18/93 (19%), Positives = 39/93 (41%)
Frame = +3
Query: 309 KLSEASQAADESERIRKALENRTNMEDDRVAILEAQLSQAKLIAEESDXKYXEVARKLAM 488
+L A + DES R R LEN ++ + + ++L + + + + + +++
Sbjct: 1067 ELKIAQENIDESGRQRHDLENNLKKKESELHSVSSRLEDEQALVSKLQRQIKDGQSRISE 1126
Query: 489 VEADLXXXXXXXXXXXXKIVELEEELRVVGNNL 587
+E +L +L+ EL +G L
Sbjct: 1127 LEEELENERQSRSKADRAKSDLQRELEELGEKL 1159
>Z81499-3|CAB04089.1| 1963|Caenorhabditis elegans Hypothetical protein
F11C3.3 protein.
Length = 1963
Score = 27.9 bits (59), Expect = 6.4
Identities = 18/93 (19%), Positives = 39/93 (41%)
Frame = +3
Query: 309 KLSEASQAADESERIRKALENRTNMEDDRVAILEAQLSQAKLIAEESDXKYXEVARKLAM 488
+L A + DES R R LEN ++ + + ++L + + + + + +++
Sbjct: 1067 ELKIAQENIDESGRQRHDLENNLKKKESELHSVSSRLEDEQALVSKLQRQIKDGQSRISE 1126
Query: 489 VEADLXXXXXXXXXXXXKIVELEEELRVVGNNL 587
+E +L +L+ EL +G L
Sbjct: 1127 LEEELENERQSRSKADRAKSDLQRELEELGEKL 1159
>J01050-1|AAA28124.1| 1966|Caenorhabditis elegans myosin heavy chain
protein.
Length = 1966
Score = 27.9 bits (59), Expect = 6.4
Identities = 18/93 (19%), Positives = 39/93 (41%)
Frame = +3
Query: 309 KLSEASQAADESERIRKALENRTNMEDDRVAILEAQLSQAKLIAEESDXKYXEVARKLAM 488
+L A + DES R R LEN ++ + + ++L + + + + + +++
Sbjct: 1070 ELKIAQENIDESGRQRHDLENNLKKKESELHSVSSRLEDEQALVSKLQRQIKDGQSRISE 1129
Query: 489 VEADLXXXXXXXXXXXXKIVELEEELRVVGNNL 587
+E +L +L+ EL +G L
Sbjct: 1130 LEEELENERQSRSKADRAKSDLQRELEELGEKL 1162
>Z81479-11|CAB03937.2| 1441|Caenorhabditis elegans Hypothetical
protein C34F6.10 protein.
Length = 1441
Score = 27.5 bits (58), Expect = 8.5
Identities = 21/90 (23%), Positives = 36/90 (40%)
Frame = +2
Query: 176 HKRLQVEIMRREEAESEVAALQPTYPTAGGGPREVRGASRDRHRQAVRGQPGRR*IRANT 355
H+ + E+ + ++ + A+ T G G RG+ R H R +R + N
Sbjct: 186 HQFVDEEVPQLVGSQQLLNAIGGTPTQNGPGTSSSRGSGRGNHGGGRRNYGNQRSLHTNN 245
Query: 356 QGAGEPHQHGG*SRCHLGGSTVTGEAHRRG 445
+G+ Q+G H G V + RG
Sbjct: 246 NESGQHSQNG-----HSGHRNVYSRGNYRG 270
>Z73423-8|CAO82012.1| 1441|Caenorhabditis elegans Hypothetical
protein C34F6.10 protein.
Length = 1441
Score = 27.5 bits (58), Expect = 8.5
Identities = 21/90 (23%), Positives = 36/90 (40%)
Frame = +2
Query: 176 HKRLQVEIMRREEAESEVAALQPTYPTAGGGPREVRGASRDRHRQAVRGQPGRR*IRANT 355
H+ + E+ + ++ + A+ T G G RG+ R H R +R + N
Sbjct: 186 HQFVDEEVPQLVGSQQLLNAIGGTPTQNGPGTSSSRGSGRGNHGGGRRNYGNQRSLHTNN 245
Query: 356 QGAGEPHQHGG*SRCHLGGSTVTGEAHRRG 445
+G+ Q+G H G V + RG
Sbjct: 246 NESGQHSQNG-----HSGHRNVYSRGNYRG 270
>Z46828-7|CAA86860.1| 311|Caenorhabditis elegans Hypothetical
protein R03D7.7 protein.
Length = 311
Score = 27.5 bits (58), Expect = 8.5
Identities = 23/78 (29%), Positives = 32/78 (41%), Gaps = 5/78 (6%)
Frame = -3
Query: 420 TVEPPRWQRDHPPCWCGS-PAPCVFARIHRRPGWPRTAWR--WRSRDAPRTSRGPPPAVG 250
+ PPR HP C C FAR+H P PR R W + + R P +
Sbjct: 226 STSPPRGNPPHPLCCCFCFGTASEFARLHTLPA-PRKDDRGPWSDHCSKKRGRVVCPKLR 284
Query: 249 YVGCR--AATSDSASSLR 202
+ C AT D+A + +
Sbjct: 285 SMVCGICGATGDNAHTTK 302
>AL110501-1|CAB54509.1| 2129|Caenorhabditis elegans Hypothetical
protein Y79H2A.3a protein.
Length = 2129
Score = 27.5 bits (58), Expect = 8.5
Identities = 15/39 (38%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
Frame = -3
Query: 579 YQRHGAPPQ-AQRFWIRRTRHAPRRAPSQPQPWPAYEQP 466
YQ+ PQ AQ++ I++ + ++AP Q Q P Y+QP
Sbjct: 2039 YQQQPPQPQYAQQYGIQQPIY--QQAPPQQQQQPVYQQP 2075
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 27.5 bits (58), Expect = 8.5
Identities = 29/99 (29%), Positives = 35/99 (35%), Gaps = 9/99 (9%)
Frame = -3
Query: 627 PFSSPXPVRLPEISGCYQRHGAPPQAQRFWIR---RTRHAPRRAPSQPQPWPAYEQPLXI 457
P SP P P+ S G+PP RT P P P PA P
Sbjct: 233 PAGSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPP 292
Query: 456 XC-----PTPRR*ASPV-TVEPPRWQRDHPPCWCGSPAP 358
P P R + P ++ PP+ PP GSP P
Sbjct: 293 RAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPP 331
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 27.5 bits (58), Expect = 8.5
Identities = 29/99 (29%), Positives = 35/99 (35%), Gaps = 9/99 (9%)
Frame = -3
Query: 627 PFSSPXPVRLPEISGCYQRHGAPPQAQRFWIR---RTRHAPRRAPSQPQPWPAYEQPLXI 457
P SP P P+ S G+PP RT P P P PA P
Sbjct: 254 PAGSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPP 313
Query: 456 XC-----PTPRR*ASPV-TVEPPRWQRDHPPCWCGSPAP 358
P P R + P ++ PP+ PP GSP P
Sbjct: 314 RAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPP 352
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 27.5 bits (58), Expect = 8.5
Identities = 29/99 (29%), Positives = 35/99 (35%), Gaps = 9/99 (9%)
Frame = -3
Query: 627 PFSSPXPVRLPEISGCYQRHGAPPQAQRFWIR---RTRHAPRRAPSQPQPWPAYEQPLXI 457
P SP P P+ S G+PP RT P P P PA P
Sbjct: 239 PAGSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPP 298
Query: 456 XC-----PTPRR*ASPV-TVEPPRWQRDHPPCWCGSPAP 358
P P R + P ++ PP+ PP GSP P
Sbjct: 299 RAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPP 337
>AC006620-1|AAF39780.1| 754|Caenorhabditis elegans Hypothetical
protein C51G7.3 protein.
Length = 754
Score = 27.5 bits (58), Expect = 8.5
Identities = 15/39 (38%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
Frame = -3
Query: 579 YQRHGAPPQ-AQRFWIRRTRHAPRRAPSQPQPWPAYEQP 466
YQ+ PQ AQ++ I++ + ++AP Q Q P Y+QP
Sbjct: 664 YQQQPPQPQYAQQYGIQQPIY--QQAPPQQQQQPVYQQP 700
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,987,398
Number of Sequences: 27780
Number of extensions: 227041
Number of successful extensions: 974
Number of sequences better than 10.0: 45
Number of HSP's better than 10.0 without gapping: 871
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 954
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1406256614
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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