BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP02_F_N12
(635 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
X72575-1|CAA51167.1| 168|Apis mellifera Apidaecin precursor pro... 25 0.61
AB204559-1|BAD89804.1| 832|Apis mellifera soluble guanylyl cycl... 24 1.1
X72577-1|CAA51169.1| 283|Apis mellifera Apidaecin precursor pro... 24 1.4
X72576-1|CAA51168.1| 144|Apis mellifera Apidaecin precursor pro... 24 1.4
AF442148-1|AAL35349.1| 199|Apis mellifera apidaecin precursor p... 24 1.4
AB264313-1|BAF43600.1| 900|Apis mellifera ecdysone-induced prot... 22 4.3
DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chlor... 21 7.6
DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chlor... 21 7.6
DQ342041-1|ABC69933.1| 828|Apis mellifera STIP protein. 21 7.6
>X72575-1|CAA51167.1| 168|Apis mellifera Apidaecin precursor
protein.
Length = 168
Score = 25.0 bits (52), Expect = 0.61
Identities = 15/57 (26%), Positives = 23/57 (40%)
Frame = -3
Query: 528 TRHAPRRAPSQPQPWPAYEQPLXIXCPTPRR*ASPVTVEPPRWQRDHPPCWCGSPAP 358
TR A R ++P+ P +P+ I P P EP ++ P + P P
Sbjct: 27 TRPARLRREAKPEAEPGNNRPIYIPQPRPPHPRLRREAEPKAEPGNNRPIYIPQPRP 83
>AB204559-1|BAD89804.1| 832|Apis mellifera soluble guanylyl cyclase
beta-3 protein.
Length = 832
Score = 24.2 bits (50), Expect = 1.1
Identities = 8/13 (61%), Positives = 11/13 (84%)
Frame = +2
Query: 173 YHKRLQVEIMRRE 211
YHK LQ+E++R E
Sbjct: 156 YHKELQIELVREE 168
>X72577-1|CAA51169.1| 283|Apis mellifera Apidaecin precursor
protein.
Length = 283
Score = 23.8 bits (49), Expect = 1.4
Identities = 14/58 (24%), Positives = 22/58 (37%)
Frame = -3
Query: 531 RTRHAPRRAPSQPQPWPAYEQPLXIXCPTPRR*ASPVTVEPPRWQRDHPPCWCGSPAP 358
R H R ++P+ P +P+ I P P EP ++ P + P P
Sbjct: 165 RPPHPRLRREAEPEAEPGNNRPVYIPQPRPPHPRLRREAEPEAEPGNNRPVYIPQPRP 222
Score = 23.8 bits (49), Expect = 1.4
Identities = 14/58 (24%), Positives = 22/58 (37%)
Frame = -3
Query: 531 RTRHAPRRAPSQPQPWPAYEQPLXIXCPTPRR*ASPVTVEPPRWQRDHPPCWCGSPAP 358
R H R ++P+ P +P+ I P P EP ++ P + P P
Sbjct: 193 RPPHPRLRREAEPEAEPGNNRPVYIPQPRPPHPRLRREAEPEAEPGNNRPVYIPQPRP 250
Score = 23.0 bits (47), Expect = 2.5
Identities = 14/57 (24%), Positives = 22/57 (38%)
Frame = -3
Query: 528 TRHAPRRAPSQPQPWPAYEQPLXIXCPTPRR*ASPVTVEPPRWQRDHPPCWCGSPAP 358
TR R ++P+ P +P+ I P P EP ++ P + P P
Sbjct: 26 TRPTRLRREAKPEAEPGNNRPVYIPQPRPPHPRLRREAEPEAEPGNNRPVYIPQPRP 82
Score = 22.2 bits (45), Expect = 4.3
Identities = 13/58 (22%), Positives = 22/58 (37%)
Frame = -3
Query: 531 RTRHAPRRAPSQPQPWPAYEQPLXIXCPTPRR*ASPVTVEPPRWQRDHPPCWCGSPAP 358
R H R ++P+ P +P+ I P P +P ++ P + P P
Sbjct: 221 RPPHPRLRREAEPEAEPGNNRPVYIPQPRPPHPRLRREAKPEAKPGNNRPVYIPQPRP 278
>X72576-1|CAA51168.1| 144|Apis mellifera Apidaecin precursor
protein.
Length = 144
Score = 23.8 bits (49), Expect = 1.4
Identities = 14/58 (24%), Positives = 22/58 (37%)
Frame = -3
Query: 531 RTRHAPRRAPSQPQPWPAYEQPLXIXCPTPRR*ASPVTVEPPRWQRDHPPCWCGSPAP 358
R H R ++P+ P +P+ I P P EP ++ P + P P
Sbjct: 54 RPPHPRLRREAEPEAEPGNNRPVYIPQPRPPHPRLRREAEPEAEPGNNRPVYIPQPRP 111
Score = 23.8 bits (49), Expect = 1.4
Identities = 14/58 (24%), Positives = 22/58 (37%)
Frame = -3
Query: 531 RTRHAPRRAPSQPQPWPAYEQPLXIXCPTPRR*ASPVTVEPPRWQRDHPPCWCGSPAP 358
R H R ++P+ P +P+ I P P EP ++ P + P P
Sbjct: 82 RPPHPRLRREAEPEAEPGNNRPVYIPQPRPPHPRLRREAEPEAEPGNNRPVYIPQPRP 139
Score = 23.4 bits (48), Expect = 1.9
Identities = 14/57 (24%), Positives = 22/57 (38%)
Frame = -3
Query: 528 TRHAPRRAPSQPQPWPAYEQPLXIXCPTPRR*ASPVTVEPPRWQRDHPPCWCGSPAP 358
TR R ++P+ P +P+ I P P EP ++ P + P P
Sbjct: 27 TRPTRLRREAEPEAEPGNNRPVYIPQPRPPHPRLRREAEPEAEPGNNRPVYIPQPRP 83
>AF442148-1|AAL35349.1| 199|Apis mellifera apidaecin precursor
protein.
Length = 199
Score = 23.8 bits (49), Expect = 1.4
Identities = 14/58 (24%), Positives = 22/58 (37%)
Frame = -3
Query: 531 RTRHAPRRAPSQPQPWPAYEQPLXIXCPTPRR*ASPVTVEPPRWQRDHPPCWCGSPAP 358
R H R ++P+ P +P+ I P P EP ++ P + P P
Sbjct: 25 RPPHPRLRREAEPEAEPGNNRPVYIPQPRPPHPRLRREAEPEAEPGNNRPVYIPQPRP 82
Score = 23.8 bits (49), Expect = 1.4
Identities = 14/58 (24%), Positives = 22/58 (37%)
Frame = -3
Query: 531 RTRHAPRRAPSQPQPWPAYEQPLXIXCPTPRR*ASPVTVEPPRWQRDHPPCWCGSPAP 358
R H R ++P+ P +P+ I P P EP ++ P + P P
Sbjct: 53 RPPHPRLRREAEPEAEPGNNRPVYIPQPRPPHPRLRREAEPEAEPGNNRPVYIPQPRP 110
Score = 23.8 bits (49), Expect = 1.4
Identities = 14/58 (24%), Positives = 22/58 (37%)
Frame = -3
Query: 531 RTRHAPRRAPSQPQPWPAYEQPLXIXCPTPRR*ASPVTVEPPRWQRDHPPCWCGSPAP 358
R H R ++P+ P +P+ I P P EP ++ P + P P
Sbjct: 81 RPPHPRLRREAEPEAEPGNNRPVYIPQPRPPHPRLRREAEPEAEPGNNRPVYIPQPRP 138
Score = 23.4 bits (48), Expect = 1.9
Identities = 14/58 (24%), Positives = 22/58 (37%)
Frame = -3
Query: 531 RTRHAPRRAPSQPQPWPAYEQPLXIXCPTPRR*ASPVTVEPPRWQRDHPPCWCGSPAP 358
R H R ++P+ P +P+ I P P EP ++ P + P P
Sbjct: 137 RPPHPRLRREAKPEAEPGNNRPVYIPQPRPPHPRLRREAEPEAEPGNNRPVYIPQPRP 194
Score = 22.2 bits (45), Expect = 4.3
Identities = 13/58 (22%), Positives = 22/58 (37%)
Frame = -3
Query: 531 RTRHAPRRAPSQPQPWPAYEQPLXIXCPTPRR*ASPVTVEPPRWQRDHPPCWCGSPAP 358
R H R ++P+ P +P+ I P P +P ++ P + P P
Sbjct: 109 RPPHPRLRREAEPEAEPGNNRPVYIPQPRPPHPRLRREAKPEAEPGNNRPVYIPQPRP 166
Score = 21.4 bits (43), Expect = 7.6
Identities = 12/51 (23%), Positives = 20/51 (39%)
Frame = -3
Query: 510 RAPSQPQPWPAYEQPLXIXCPTPRR*ASPVTVEPPRWQRDHPPCWCGSPAP 358
R ++P+ P +P+ I P P EP ++ P + P P
Sbjct: 4 RREAKPEAEPGNNRPVYIPQPRPPHPRLRREAEPEAEPGNNRPVYIPQPRP 54
>AB264313-1|BAF43600.1| 900|Apis mellifera ecdysone-induced protein
75 protein.
Length = 900
Score = 22.2 bits (45), Expect = 4.3
Identities = 9/31 (29%), Positives = 16/31 (51%)
Frame = -3
Query: 558 PQAQRFWIRRTRHAPRRAPSQPQPWPAYEQP 466
PQ Q+ ++ + ++ Q Q WP E+P
Sbjct: 440 PQQQQQQQQQQQQQQQQQQQQQQHWPMEEEP 470
>DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 21.4 bits (43), Expect = 7.6
Identities = 5/9 (55%), Positives = 8/9 (88%)
Frame = -3
Query: 96 VPCCMFVVI 70
+PCCM V++
Sbjct: 250 IPCCMLVIV 258
>DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 21.4 bits (43), Expect = 7.6
Identities = 5/9 (55%), Positives = 8/9 (88%)
Frame = -3
Query: 96 VPCCMFVVI 70
+PCCM V++
Sbjct: 250 IPCCMLVIV 258
>DQ342041-1|ABC69933.1| 828|Apis mellifera STIP protein.
Length = 828
Score = 21.4 bits (43), Expect = 7.6
Identities = 11/43 (25%), Positives = 19/43 (44%)
Frame = +3
Query: 366 ENRTNMEDDRVAILEAQLSQAKLIAEESDXKYXEVARKLAMVE 494
+ RT DRV LEA+ + ++ + LA+V+
Sbjct: 338 DRRTRHLSDRVVALEAEKKNLSKVIDQHSQLIDTLENVLAIVD 380
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 129,824
Number of Sequences: 438
Number of extensions: 2973
Number of successful extensions: 24
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 19071468
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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