Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP02_F_N11
(654 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U87279-1|AAD00626.1| 221|Homo sapiens splicing factor SRp30c pr... 108 1e-23
U30825-1|AAA93069.1| 221|Homo sapiens SRp30c protein. 108 1e-23
M72709-2|AAA35565.1| 248|Homo sapiens protein ( Human alternati... 108 1e-23
M72709-1|AAA35564.1| 292|Homo sapiens protein ( Human alternati... 108 1e-23
M69040-1|AAA03476.1| 248|Homo sapiens SF2p33 protein. 108 1e-23
BC093973-1|AAH93973.1| 221|Homo sapiens splicing factor, argini... 108 1e-23
BC093971-1|AAH93971.1| 221|Homo sapiens splicing factor, argini... 108 1e-23
BC033785-1|AAH33785.1| 201|Homo sapiens SFRS1 protein protein. 108 1e-23
BC010264-1|AAH10264.1| 248|Homo sapiens splicing factor, argini... 108 1e-23
AL021546-5|CAA16498.1| 221|Homo sapiens splicing factor, argini... 108 1e-23
AB209558-1|BAD92795.1| 233|Homo sapiens splicing factor, argini... 108 1e-23
AB062124-1|BAB93456.1| 248|Homo sapiens OK/SW-cl.3 protein. 108 1e-23
L14076-1|AAA36649.1| 494|Homo sapiens pre-mRNA splicing factor ... 66 8e-11
BT007415-1|AAP36083.1| 494|Homo sapiens splicing factor, argini... 66 8e-11
BC002781-1|AAH02781.1| 494|Homo sapiens splicing factor, argini... 66 8e-11
AL590729-1|CAI14326.1| 494|Homo sapiens splicing factor, argini... 66 8e-11
AL357500-1|CAH71635.1| 494|Homo sapiens splicing factor, argini... 66 8e-11
AK223444-1|BAD97164.1| 382|Homo sapiens splicing factor, argini... 66 8e-11
AC004236-1|AAC04476.1| 192|Homo sapiens SRP0001LB protein. 66 8e-11
AB209856-1|BAD93093.1| 419|Homo sapiens splicing factor, argini... 66 8e-11
U30883-1|AAA93073.1| 344|Homo sapiens SRp55-1 protein. 64 3e-10
U30829-1|AAA93072.1| 335|Homo sapiens SRp55-3 protein. 64 3e-10
BC006832-1|AAH06832.1| 344|Homo sapiens splicing factor, argini... 64 3e-10
AL031681-3|CAB43960.1| 344|Homo sapiens splicing factor, argini... 64 3e-10
AB208976-1|BAD92213.1| 279|Homo sapiens arginine/serine-rich sp... 64 3e-10
U30826-1|AAA93070.1| 272|Homo sapiens SRp40-1 protein. 58 4e-08
BT007089-1|AAP35752.1| 272|Homo sapiens splicing factor, argini... 58 4e-08
BC040209-1|AAH40209.1| 272|Homo sapiens splicing factor, argini... 58 4e-08
BC018823-1|AAH18823.1| 272|Homo sapiens splicing factor, argini... 58 4e-08
AB209804-1|BAD93041.1| 326|Homo sapiens CS0DF038YO05 variant pr... 45 2e-04
AK023133-1|BAB14421.1| 576|Homo sapiens protein ( Homo sapiens ... 42 0.001
AF106685-1|AAD43038.1| 547|Homo sapiens myelin gene expression ... 42 0.001
AB037762-1|BAA92579.1| 620|Homo sapiens KIAA1341 protein protein. 42 0.001
L32611-1|AAL31359.1| 691|Homo sapiens ribonucleoprotein protein. 40 0.008
L03532-1|AAA36192.1| 729|Homo sapiens M4 protein protein. 40 0.008
BC019580-1|AAH19580.1| 730|Homo sapiens heterogeneous nuclear r... 40 0.008
BC000138-1|AAH00138.2| 730|Homo sapiens heterogeneous nuclear r... 40 0.008
AF061832-1|AAC16002.1| 691|Homo sapiens M4 protein deletion mut... 40 0.008
CR457272-1|CAG33553.1| 357|Homo sapiens PSPC1 protein. 33 0.67
BC014184-1|AAH14184.2| 393|Homo sapiens PSPC1 protein protein. 33 0.67
AL354808-5|CAI41005.1| 248|Homo sapiens paraspeckle component 1... 33 0.67
AL354808-4|CAI41004.1| 523|Homo sapiens paraspeckle component 1... 33 0.67
AK001817-1|BAA91924.1| 357|Homo sapiens protein ( Homo sapiens ... 33 0.67
AF449627-1|AAL59602.1| 393|Homo sapiens paraspeckle protein 1 b... 33 0.67
AF448795-1|AAL59601.1| 523|Homo sapiens paraspeckle protein 1 a... 33 0.67
Y11289-1|CAA72157.1| 471|Homo sapiens p54nrb protein. 32 2.1
U89867-1|AAC51852.1| 471|Homo sapiens nuclear matrix protein 55... 32 2.1
U02493-1|AAA03427.1| 471|Homo sapiens 54 kDa protein protein. 32 2.1
L14599-1|AAC37578.1| 471|Homo sapiens protein ( Human mRNA, com... 32 2.1
CR456761-1|CAG33042.1| 471|Homo sapiens NONO protein. 32 2.1
BC069639-1|AAH69639.1| 471|Homo sapiens non-POU domain containi... 32 2.1
BC069616-1|AAH69616.1| 471|Homo sapiens non-POU domain containi... 32 2.1
BC028299-1|AAH28299.1| 471|Homo sapiens non-POU domain containi... 32 2.1
BC012141-1|AAH12141.1| 471|Homo sapiens NONO protein protein. 32 2.1
BC003129-1|AAH03129.1| 471|Homo sapiens NONO protein protein. 32 2.1
BC002364-1|AAH02364.1| 471|Homo sapiens non-POU domain containi... 32 2.1
X70944-1|CAA50283.1| 707|Homo sapiens PTB-associated splicing f... 31 3.6
BC110335-1|AAI10336.1| 450|Homo sapiens alanine-glyoxylate amin... 31 3.6
BC051192-1|AAH51192.1| 707|Homo sapiens splicing factor proline... 31 3.6
BC037567-1|AAH37567.1| 450|Homo sapiens alanine-glyoxylate amin... 31 3.6
BC027708-1|AAH27708.1| 525|Homo sapiens SFPQ protein protein. 31 3.6
BC004534-1|AAH04534.2| 634|Homo sapiens SFPQ protein protein. 31 3.6
AL590434-2|CAI12467.1| 707|Homo sapiens splicing factor proline... 31 3.6
X72018-1|CAA50897.1| 570|Homo sapiens ORF protein. 31 4.7
BC064588-1|AAH64588.1| 285|Homo sapiens HNRPM protein protein. 31 4.7
BC008895-1|AAH08895.2| 425|Homo sapiens HNRPM protein protein. 31 4.7
AB209733-1|BAD92970.1| 615|Homo sapiens heterogeneous nuclear r... 31 4.7
>U87279-1|AAD00626.1| 221|Homo sapiens splicing factor SRp30c
protein.
Length = 221
Score = 108 bits (260), Expect = 1e-23
Identities = 46/61 (75%), Positives = 56/61 (91%)
Frame = +3
Query: 471 EYRVLVTGLPPSGSWQDLKDHMREAGDVCFADTFKDGSGVVEFLRHEDMKYAVKKLDDSX 650
++RVLV+GLPPSGSWQDLKDHMREAGDVC+AD KDG G+VE+LR EDM+YA++KLDD+
Sbjct: 110 DFRVLVSGLPPSGSWQDLKDHMREAGDVCYADVQKDGVGMVEYLRKEDMEYALRKLDDTK 169
Query: 651 F 653
F
Sbjct: 170 F 170
Score = 41.9 bits (94), Expect = 0.002
Identities = 20/35 (57%), Positives = 24/35 (68%), Gaps = 2/35 (5%)
Frame = +3
Query: 120 MSGGSSSNRNEC--RIYVGNLPPDIRTKDIQDLFY 218
MSG + E RIYVGNLP D+R KD++DLFY
Sbjct: 1 MSGWADERGGEGDGRIYVGNLPTDVREKDLEDLFY 35
>U30825-1|AAA93069.1| 221|Homo sapiens SRp30c protein.
Length = 221
Score = 108 bits (260), Expect = 1e-23
Identities = 46/61 (75%), Positives = 56/61 (91%)
Frame = +3
Query: 471 EYRVLVTGLPPSGSWQDLKDHMREAGDVCFADTFKDGSGVVEFLRHEDMKYAVKKLDDSX 650
++RVLV+GLPPSGSWQDLKDHMREAGDVC+AD KDG G+VE+LR EDM+YA++KLDD+
Sbjct: 110 DFRVLVSGLPPSGSWQDLKDHMREAGDVCYADVQKDGVGMVEYLRKEDMEYALRKLDDTK 169
Query: 651 F 653
F
Sbjct: 170 F 170
Score = 41.9 bits (94), Expect = 0.002
Identities = 20/35 (57%), Positives = 24/35 (68%), Gaps = 2/35 (5%)
Frame = +3
Query: 120 MSGGSSSNRNEC--RIYVGNLPPDIRTKDIQDLFY 218
MSG + E RIYVGNLP D+R KD++DLFY
Sbjct: 1 MSGWADERGGEGDGRIYVGNLPTDVREKDLEDLFY 35
>M72709-2|AAA35565.1| 248|Homo sapiens protein ( Human alternative
splicing factor mRNA, complete cds. ).
Length = 248
Score = 108 bits (260), Expect = 1e-23
Identities = 46/61 (75%), Positives = 56/61 (91%)
Frame = +3
Query: 471 EYRVLVTGLPPSGSWQDLKDHMREAGDVCFADTFKDGSGVVEFLRHEDMKYAVKKLDDSX 650
E RV+V+GLPPSGSWQDLKDHMREAGDVC+AD ++DG+GVVEF+R EDM YAV+KLD++
Sbjct: 120 ENRVVVSGLPPSGSWQDLKDHMREAGDVCYADVYRDGTGVVEFVRKEDMTYAVRKLDNTK 179
Query: 651 F 653
F
Sbjct: 180 F 180
Score = 55.6 bits (128), Expect = 1e-07
Identities = 25/37 (67%), Positives = 29/37 (78%), Gaps = 4/37 (10%)
Frame = +3
Query: 120 MSGGS----SSNRNECRIYVGNLPPDIRTKDIQDLFY 218
MSGG + N+CRIYVGNLPPDIRTKDI+D+FY
Sbjct: 1 MSGGGVIRGPAGNNDCRIYVGNLPPDIRTKDIEDVFY 37
Score = 38.7 bits (86), Expect = 0.018
Identities = 17/27 (62%), Positives = 21/27 (77%), Gaps = 1/27 (3%)
Frame = +1
Query: 214 FTTFGKVTFVDLKNRKG-PPFAFVEFE 291
F +G + +DLKNR+G PPFAFVEFE
Sbjct: 36 FYKYGAIRDIDLKNRRGGPPFAFVEFE 62
Score = 31.5 bits (68), Expect = 2.7
Identities = 12/12 (100%), Positives = 12/12 (100%)
Frame = +2
Query: 332 GYDYDGYRLRVE 367
GYDYDGYRLRVE
Sbjct: 76 GYDYDGYRLRVE 87
>M72709-1|AAA35564.1| 292|Homo sapiens protein ( Human alternative
splicing factor mRNA, complete cds. ).
Length = 292
Score = 108 bits (260), Expect = 1e-23
Identities = 46/61 (75%), Positives = 56/61 (91%)
Frame = +3
Query: 471 EYRVLVTGLPPSGSWQDLKDHMREAGDVCFADTFKDGSGVVEFLRHEDMKYAVKKLDDSX 650
E RV+V+GLPPSGSWQDLKDHMREAGDVC+AD ++DG+GVVEF+R EDM YAV+KLD++
Sbjct: 120 ENRVVVSGLPPSGSWQDLKDHMREAGDVCYADVYRDGTGVVEFVRKEDMTYAVRKLDNTK 179
Query: 651 F 653
F
Sbjct: 180 F 180
Score = 55.6 bits (128), Expect = 1e-07
Identities = 25/37 (67%), Positives = 29/37 (78%), Gaps = 4/37 (10%)
Frame = +3
Query: 120 MSGGS----SSNRNECRIYVGNLPPDIRTKDIQDLFY 218
MSGG + N+CRIYVGNLPPDIRTKDI+D+FY
Sbjct: 1 MSGGGVIRGPAGNNDCRIYVGNLPPDIRTKDIEDVFY 37
Score = 38.7 bits (86), Expect = 0.018
Identities = 17/27 (62%), Positives = 21/27 (77%), Gaps = 1/27 (3%)
Frame = +1
Query: 214 FTTFGKVTFVDLKNRKG-PPFAFVEFE 291
F +G + +DLKNR+G PPFAFVEFE
Sbjct: 36 FYKYGAIRDIDLKNRRGGPPFAFVEFE 62
Score = 31.5 bits (68), Expect = 2.7
Identities = 12/12 (100%), Positives = 12/12 (100%)
Frame = +2
Query: 332 GYDYDGYRLRVE 367
GYDYDGYRLRVE
Sbjct: 76 GYDYDGYRLRVE 87
>M69040-1|AAA03476.1| 248|Homo sapiens SF2p33 protein.
Length = 248
Score = 108 bits (260), Expect = 1e-23
Identities = 46/61 (75%), Positives = 56/61 (91%)
Frame = +3
Query: 471 EYRVLVTGLPPSGSWQDLKDHMREAGDVCFADTFKDGSGVVEFLRHEDMKYAVKKLDDSX 650
E RV+V+GLPPSGSWQDLKDHMREAGDVC+AD ++DG+GVVEF+R EDM YAV+KLD++
Sbjct: 120 ENRVVVSGLPPSGSWQDLKDHMREAGDVCYADVYRDGTGVVEFVRKEDMTYAVRKLDNTK 179
Query: 651 F 653
F
Sbjct: 180 F 180
Score = 55.6 bits (128), Expect = 1e-07
Identities = 25/37 (67%), Positives = 29/37 (78%), Gaps = 4/37 (10%)
Frame = +3
Query: 120 MSGGS----SSNRNECRIYVGNLPPDIRTKDIQDLFY 218
MSGG + N+CRIYVGNLPPDIRTKDI+D+FY
Sbjct: 1 MSGGGVIRGPAGNNDCRIYVGNLPPDIRTKDIEDVFY 37
Score = 38.7 bits (86), Expect = 0.018
Identities = 17/27 (62%), Positives = 21/27 (77%), Gaps = 1/27 (3%)
Frame = +1
Query: 214 FTTFGKVTFVDLKNRKG-PPFAFVEFE 291
F +G + +DLKNR+G PPFAFVEFE
Sbjct: 36 FYKYGAIRDIDLKNRRGGPPFAFVEFE 62
Score = 31.5 bits (68), Expect = 2.7
Identities = 12/12 (100%), Positives = 12/12 (100%)
Frame = +2
Query: 332 GYDYDGYRLRVE 367
GYDYDGYRLRVE
Sbjct: 76 GYDYDGYRLRVE 87
>BC093973-1|AAH93973.1| 221|Homo sapiens splicing factor,
arginine/serine-rich 9 protein.
Length = 221
Score = 108 bits (260), Expect = 1e-23
Identities = 46/61 (75%), Positives = 56/61 (91%)
Frame = +3
Query: 471 EYRVLVTGLPPSGSWQDLKDHMREAGDVCFADTFKDGSGVVEFLRHEDMKYAVKKLDDSX 650
++RVLV+GLPPSGSWQDLKDHMREAGDVC+AD KDG G+VE+LR EDM+YA++KLDD+
Sbjct: 110 DFRVLVSGLPPSGSWQDLKDHMREAGDVCYADVQKDGVGMVEYLRKEDMEYALRKLDDTK 169
Query: 651 F 653
F
Sbjct: 170 F 170
Score = 41.9 bits (94), Expect = 0.002
Identities = 20/35 (57%), Positives = 24/35 (68%), Gaps = 2/35 (5%)
Frame = +3
Query: 120 MSGGSSSNRNEC--RIYVGNLPPDIRTKDIQDLFY 218
MSG + E RIYVGNLP D+R KD++DLFY
Sbjct: 1 MSGWADERGGEGDGRIYVGNLPTDVREKDLEDLFY 35
>BC093971-1|AAH93971.1| 221|Homo sapiens splicing factor,
arginine/serine-rich 9 protein.
Length = 221
Score = 108 bits (260), Expect = 1e-23
Identities = 46/61 (75%), Positives = 56/61 (91%)
Frame = +3
Query: 471 EYRVLVTGLPPSGSWQDLKDHMREAGDVCFADTFKDGSGVVEFLRHEDMKYAVKKLDDSX 650
++RVLV+GLPPSGSWQDLKDHMREAGDVC+AD KDG G+VE+LR EDM+YA++KLDD+
Sbjct: 110 DFRVLVSGLPPSGSWQDLKDHMREAGDVCYADVQKDGVGMVEYLRKEDMEYALRKLDDTK 169
Query: 651 F 653
F
Sbjct: 170 F 170
Score = 41.9 bits (94), Expect = 0.002
Identities = 20/35 (57%), Positives = 24/35 (68%), Gaps = 2/35 (5%)
Frame = +3
Query: 120 MSGGSSSNRNEC--RIYVGNLPPDIRTKDIQDLFY 218
MSG + E RIYVGNLP D+R KD++DLFY
Sbjct: 1 MSGWADERGGEGDGRIYVGNLPTDVREKDLEDLFY 35
>BC033785-1|AAH33785.1| 201|Homo sapiens SFRS1 protein protein.
Length = 201
Score = 108 bits (260), Expect = 1e-23
Identities = 46/61 (75%), Positives = 56/61 (91%)
Frame = +3
Query: 471 EYRVLVTGLPPSGSWQDLKDHMREAGDVCFADTFKDGSGVVEFLRHEDMKYAVKKLDDSX 650
E RV+V+GLPPSGSWQDLKDHMREAGDVC+AD ++DG+GVVEF+R EDM YAV+KLD++
Sbjct: 120 ENRVVVSGLPPSGSWQDLKDHMREAGDVCYADVYRDGTGVVEFVRKEDMTYAVRKLDNTK 179
Query: 651 F 653
F
Sbjct: 180 F 180
Score = 55.6 bits (128), Expect = 1e-07
Identities = 25/37 (67%), Positives = 29/37 (78%), Gaps = 4/37 (10%)
Frame = +3
Query: 120 MSGGS----SSNRNECRIYVGNLPPDIRTKDIQDLFY 218
MSGG + N+CRIYVGNLPPDIRTKDI+D+FY
Sbjct: 1 MSGGGVIRGPAGNNDCRIYVGNLPPDIRTKDIEDVFY 37
Score = 38.7 bits (86), Expect = 0.018
Identities = 17/27 (62%), Positives = 21/27 (77%), Gaps = 1/27 (3%)
Frame = +1
Query: 214 FTTFGKVTFVDLKNRKG-PPFAFVEFE 291
F +G + +DLKNR+G PPFAFVEFE
Sbjct: 36 FYKYGAIRDIDLKNRRGGPPFAFVEFE 62
Score = 31.5 bits (68), Expect = 2.7
Identities = 12/12 (100%), Positives = 12/12 (100%)
Frame = +2
Query: 332 GYDYDGYRLRVE 367
GYDYDGYRLRVE
Sbjct: 76 GYDYDGYRLRVE 87
>BC010264-1|AAH10264.1| 248|Homo sapiens splicing factor,
arginine/serine-rich 1 (splicing factor 2, alternate
splicing protein.
Length = 248
Score = 108 bits (260), Expect = 1e-23
Identities = 46/61 (75%), Positives = 56/61 (91%)
Frame = +3
Query: 471 EYRVLVTGLPPSGSWQDLKDHMREAGDVCFADTFKDGSGVVEFLRHEDMKYAVKKLDDSX 650
E RV+V+GLPPSGSWQDLKDHMREAGDVC+AD ++DG+GVVEF+R EDM YAV+KLD++
Sbjct: 120 ENRVVVSGLPPSGSWQDLKDHMREAGDVCYADVYRDGTGVVEFVRKEDMTYAVRKLDNTK 179
Query: 651 F 653
F
Sbjct: 180 F 180
Score = 55.6 bits (128), Expect = 1e-07
Identities = 25/37 (67%), Positives = 29/37 (78%), Gaps = 4/37 (10%)
Frame = +3
Query: 120 MSGGS----SSNRNECRIYVGNLPPDIRTKDIQDLFY 218
MSGG + N+CRIYVGNLPPDIRTKDI+D+FY
Sbjct: 1 MSGGGVIRGPAGNNDCRIYVGNLPPDIRTKDIEDVFY 37
Score = 38.7 bits (86), Expect = 0.018
Identities = 17/27 (62%), Positives = 21/27 (77%), Gaps = 1/27 (3%)
Frame = +1
Query: 214 FTTFGKVTFVDLKNRKG-PPFAFVEFE 291
F +G + +DLKNR+G PPFAFVEFE
Sbjct: 36 FYKYGAIRDIDLKNRRGGPPFAFVEFE 62
Score = 31.5 bits (68), Expect = 2.7
Identities = 12/12 (100%), Positives = 12/12 (100%)
Frame = +2
Query: 332 GYDYDGYRLRVE 367
GYDYDGYRLRVE
Sbjct: 76 GYDYDGYRLRVE 87
>AL021546-5|CAA16498.1| 221|Homo sapiens splicing factor,
arginine/serine-rich 9 protein.
Length = 221
Score = 108 bits (260), Expect = 1e-23
Identities = 46/61 (75%), Positives = 56/61 (91%)
Frame = +3
Query: 471 EYRVLVTGLPPSGSWQDLKDHMREAGDVCFADTFKDGSGVVEFLRHEDMKYAVKKLDDSX 650
++RVLV+GLPPSGSWQDLKDHMREAGDVC+AD KDG G+VE+LR EDM+YA++KLDD+
Sbjct: 110 DFRVLVSGLPPSGSWQDLKDHMREAGDVCYADVQKDGVGMVEYLRKEDMEYALRKLDDTK 169
Query: 651 F 653
F
Sbjct: 170 F 170
Score = 41.9 bits (94), Expect = 0.002
Identities = 20/35 (57%), Positives = 24/35 (68%), Gaps = 2/35 (5%)
Frame = +3
Query: 120 MSGGSSSNRNEC--RIYVGNLPPDIRTKDIQDLFY 218
MSG + E RIYVGNLP D+R KD++DLFY
Sbjct: 1 MSGWADERGGEGDGRIYVGNLPTDVREKDLEDLFY 35
>AB209558-1|BAD92795.1| 233|Homo sapiens splicing factor,
arginine/serine-rich 1 (splicing factor 2, alternate
splicing protein.
Length = 233
Score = 108 bits (260), Expect = 1e-23
Identities = 46/61 (75%), Positives = 56/61 (91%)
Frame = +3
Query: 471 EYRVLVTGLPPSGSWQDLKDHMREAGDVCFADTFKDGSGVVEFLRHEDMKYAVKKLDDSX 650
E RV+V+GLPPSGSWQDLKDHMREAGDVC+AD ++DG+GVVEF+R EDM YAV+KLD++
Sbjct: 152 ENRVVVSGLPPSGSWQDLKDHMREAGDVCYADVYRDGTGVVEFVRKEDMTYAVRKLDNTK 211
Query: 651 F 653
F
Sbjct: 212 F 212
Score = 55.6 bits (128), Expect = 1e-07
Identities = 25/37 (67%), Positives = 29/37 (78%), Gaps = 4/37 (10%)
Frame = +3
Query: 120 MSGGS----SSNRNECRIYVGNLPPDIRTKDIQDLFY 218
MSGG + N+CRIYVGNLPPDIRTKDI+D+FY
Sbjct: 33 MSGGGVIRGPAGNNDCRIYVGNLPPDIRTKDIEDVFY 69
Score = 38.7 bits (86), Expect = 0.018
Identities = 17/27 (62%), Positives = 21/27 (77%), Gaps = 1/27 (3%)
Frame = +1
Query: 214 FTTFGKVTFVDLKNRKG-PPFAFVEFE 291
F +G + +DLKNR+G PPFAFVEFE
Sbjct: 68 FYKYGAIRDIDLKNRRGGPPFAFVEFE 94
Score = 31.5 bits (68), Expect = 2.7
Identities = 12/12 (100%), Positives = 12/12 (100%)
Frame = +2
Query: 332 GYDYDGYRLRVE 367
GYDYDGYRLRVE
Sbjct: 108 GYDYDGYRLRVE 119
>AB062124-1|BAB93456.1| 248|Homo sapiens OK/SW-cl.3 protein.
Length = 248
Score = 108 bits (260), Expect = 1e-23
Identities = 46/61 (75%), Positives = 56/61 (91%)
Frame = +3
Query: 471 EYRVLVTGLPPSGSWQDLKDHMREAGDVCFADTFKDGSGVVEFLRHEDMKYAVKKLDDSX 650
E RV+V+GLPPSGSWQDLKDHMREAGDVC+AD ++DG+GVVEF+R EDM YAV+KLD++
Sbjct: 120 ENRVVVSGLPPSGSWQDLKDHMREAGDVCYADVYRDGTGVVEFVRKEDMTYAVRKLDNTK 179
Query: 651 F 653
F
Sbjct: 180 F 180
Score = 55.6 bits (128), Expect = 1e-07
Identities = 25/37 (67%), Positives = 29/37 (78%), Gaps = 4/37 (10%)
Frame = +3
Query: 120 MSGGS----SSNRNECRIYVGNLPPDIRTKDIQDLFY 218
MSGG + N+CRIYVGNLPPDIRTKDI+D+FY
Sbjct: 1 MSGGGVIRGPAGNNDCRIYVGNLPPDIRTKDIEDVFY 37
Score = 38.7 bits (86), Expect = 0.018
Identities = 17/27 (62%), Positives = 21/27 (77%), Gaps = 1/27 (3%)
Frame = +1
Query: 214 FTTFGKVTFVDLKNRKG-PPFAFVEFE 291
F +G + +DLKNR+G PPFAFVEFE
Sbjct: 36 FYKYGAIRDIDLKNRRGGPPFAFVEFE 62
Score = 31.5 bits (68), Expect = 2.7
Identities = 12/12 (100%), Positives = 12/12 (100%)
Frame = +2
Query: 332 GYDYDGYRLRVE 367
GYDYDGYRLRVE
Sbjct: 76 GYDYDGYRLRVE 87
>L14076-1|AAA36649.1| 494|Homo sapiens pre-mRNA splicing factor
protein.
Length = 494
Score = 66.5 bits (155), Expect = 8e-11
Identities = 31/59 (52%), Positives = 42/59 (71%), Gaps = 2/59 (3%)
Frame = +3
Query: 471 EYRVLVTGLPPSGSWQDLKDHMREAGDVCFADTFK--DGSGVVEFLRHEDMKYAVKKLD 641
EYR++V L SWQDLKD+MR+AG+V +AD K GV+EF+ + DMK A++KLD
Sbjct: 103 EYRLIVENLSSRCSWQDLKDYMRQAGEVTYADAHKGRKNEGVIEFVSYSDMKRALEKLD 161
>BT007415-1|AAP36083.1| 494|Homo sapiens splicing factor,
arginine/serine-rich 4 protein.
Length = 494
Score = 66.5 bits (155), Expect = 8e-11
Identities = 31/59 (52%), Positives = 42/59 (71%), Gaps = 2/59 (3%)
Frame = +3
Query: 471 EYRVLVTGLPPSGSWQDLKDHMREAGDVCFADTFK--DGSGVVEFLRHEDMKYAVKKLD 641
EYR++V L SWQDLKD+MR+AG+V +AD K GV+EF+ + DMK A++KLD
Sbjct: 103 EYRLIVENLSSRCSWQDLKDYMRQAGEVTYADAHKGRKNEGVIEFVSYSDMKRALEKLD 161
>BC002781-1|AAH02781.1| 494|Homo sapiens splicing factor,
arginine/serine-rich 4 protein.
Length = 494
Score = 66.5 bits (155), Expect = 8e-11
Identities = 31/59 (52%), Positives = 42/59 (71%), Gaps = 2/59 (3%)
Frame = +3
Query: 471 EYRVLVTGLPPSGSWQDLKDHMREAGDVCFADTFK--DGSGVVEFLRHEDMKYAVKKLD 641
EYR++V L SWQDLKD+MR+AG+V +AD K GV+EF+ + DMK A++KLD
Sbjct: 103 EYRLIVENLSSRCSWQDLKDYMRQAGEVTYADAHKGRKNEGVIEFVSYSDMKRALEKLD 161
>AL590729-1|CAI14326.1| 494|Homo sapiens splicing factor,
arginine/serine-rich 4 protein.
Length = 494
Score = 66.5 bits (155), Expect = 8e-11
Identities = 31/59 (52%), Positives = 42/59 (71%), Gaps = 2/59 (3%)
Frame = +3
Query: 471 EYRVLVTGLPPSGSWQDLKDHMREAGDVCFADTFK--DGSGVVEFLRHEDMKYAVKKLD 641
EYR++V L SWQDLKD+MR+AG+V +AD K GV+EF+ + DMK A++KLD
Sbjct: 103 EYRLIVENLSSRCSWQDLKDYMRQAGEVTYADAHKGRKNEGVIEFVSYSDMKRALEKLD 161
>AL357500-1|CAH71635.1| 494|Homo sapiens splicing factor,
arginine/serine-rich 4 protein.
Length = 494
Score = 66.5 bits (155), Expect = 8e-11
Identities = 31/59 (52%), Positives = 42/59 (71%), Gaps = 2/59 (3%)
Frame = +3
Query: 471 EYRVLVTGLPPSGSWQDLKDHMREAGDVCFADTFK--DGSGVVEFLRHEDMKYAVKKLD 641
EYR++V L SWQDLKD+MR+AG+V +AD K GV+EF+ + DMK A++KLD
Sbjct: 103 EYRLIVENLSSRCSWQDLKDYMRQAGEVTYADAHKGRKNEGVIEFVSYSDMKRALEKLD 161
>AK223444-1|BAD97164.1| 382|Homo sapiens splicing factor,
arginine/serine-rich 4 variant protein.
Length = 382
Score = 66.5 bits (155), Expect = 8e-11
Identities = 31/59 (52%), Positives = 42/59 (71%), Gaps = 2/59 (3%)
Frame = +3
Query: 471 EYRVLVTGLPPSGSWQDLKDHMREAGDVCFADTFK--DGSGVVEFLRHEDMKYAVKKLD 641
EYR++V L SWQDLKD+MR+AG+V +AD K GV+EF+ + DMK A++KLD
Sbjct: 103 EYRLIVENLSSRCSWQDLKDYMRQAGEVTYADAHKGRKNEGVIEFVSYSDMKRALEKLD 161
>AC004236-1|AAC04476.1| 192|Homo sapiens SRP0001LB protein.
Length = 192
Score = 66.5 bits (155), Expect = 8e-11
Identities = 31/59 (52%), Positives = 42/59 (71%), Gaps = 2/59 (3%)
Frame = +3
Query: 471 EYRVLVTGLPPSGSWQDLKDHMREAGDVCFADTFK--DGSGVVEFLRHEDMKYAVKKLD 641
EYR++V L SWQDLKD+MR+AG+V +AD K GV+EF+ + DMK A++KLD
Sbjct: 103 EYRLIVENLSSRCSWQDLKDYMRQAGEVTYADAHKGRKNEGVIEFVSYSDMKRALEKLD 161
>AB209856-1|BAD93093.1| 419|Homo sapiens splicing factor,
arginine/serine-rich 4 variant protein.
Length = 419
Score = 66.5 bits (155), Expect = 8e-11
Identities = 31/59 (52%), Positives = 42/59 (71%), Gaps = 2/59 (3%)
Frame = +3
Query: 471 EYRVLVTGLPPSGSWQDLKDHMREAGDVCFADTFK--DGSGVVEFLRHEDMKYAVKKLD 641
EYR++V L SWQDLKD+MR+AG+V +AD K GV+EF+ + DMK A++KLD
Sbjct: 28 EYRLIVENLSSRCSWQDLKDYMRQAGEVTYADAHKGRKNEGVIEFVSYSDMKRALEKLD 86
>U30883-1|AAA93073.1| 344|Homo sapiens SRp55-1 protein.
Length = 344
Score = 64.5 bits (150), Expect = 3e-10
Identities = 31/59 (52%), Positives = 40/59 (67%), Gaps = 2/59 (3%)
Frame = +3
Query: 471 EYRVLVTGLPPSGSWQDLKDHMREAGDVCFADTFKD--GSGVVEFLRHEDMKYAVKKLD 641
EYR++V L SWQDLKD MR+AG+V +AD K+ GV+EF + DMK A+ KLD
Sbjct: 109 EYRLIVENLSSRCSWQDLKDFMRQAGEVTYADAHKERTNEGVIEFRSYSDMKRALDKLD 167
>U30829-1|AAA93072.1| 335|Homo sapiens SRp55-3 protein.
Length = 335
Score = 64.5 bits (150), Expect = 3e-10
Identities = 31/59 (52%), Positives = 40/59 (67%), Gaps = 2/59 (3%)
Frame = +3
Query: 471 EYRVLVTGLPPSGSWQDLKDHMREAGDVCFADTFKD--GSGVVEFLRHEDMKYAVKKLD 641
EYR++V L SWQDLKD MR+AG+V +AD K+ GV+EF + DMK A+ KLD
Sbjct: 109 EYRLIVENLSSRCSWQDLKDFMRQAGEVTYADAHKERTNEGVIEFRSYSDMKRALDKLD 167
>BC006832-1|AAH06832.1| 344|Homo sapiens splicing factor,
arginine/serine-rich 6 protein.
Length = 344
Score = 64.5 bits (150), Expect = 3e-10
Identities = 31/59 (52%), Positives = 40/59 (67%), Gaps = 2/59 (3%)
Frame = +3
Query: 471 EYRVLVTGLPPSGSWQDLKDHMREAGDVCFADTFKD--GSGVVEFLRHEDMKYAVKKLD 641
EYR++V L SWQDLKD MR+AG+V +AD K+ GV+EF + DMK A+ KLD
Sbjct: 109 EYRLIVENLSSRCSWQDLKDFMRQAGEVTYADAHKERTNEGVIEFRSYSDMKRALDKLD 167
>AL031681-3|CAB43960.1| 344|Homo sapiens splicing factor,
arginine/serine-rich 6 protein.
Length = 344
Score = 64.5 bits (150), Expect = 3e-10
Identities = 31/59 (52%), Positives = 40/59 (67%), Gaps = 2/59 (3%)
Frame = +3
Query: 471 EYRVLVTGLPPSGSWQDLKDHMREAGDVCFADTFKD--GSGVVEFLRHEDMKYAVKKLD 641
EYR++V L SWQDLKD MR+AG+V +AD K+ GV+EF + DMK A+ KLD
Sbjct: 109 EYRLIVENLSSRCSWQDLKDFMRQAGEVTYADAHKERTNEGVIEFRSYSDMKRALDKLD 167
>AB208976-1|BAD92213.1| 279|Homo sapiens arginine/serine-rich
splicing factor 6 variant protein.
Length = 279
Score = 64.5 bits (150), Expect = 3e-10
Identities = 31/59 (52%), Positives = 40/59 (67%), Gaps = 2/59 (3%)
Frame = +3
Query: 471 EYRVLVTGLPPSGSWQDLKDHMREAGDVCFADTFKD--GSGVVEFLRHEDMKYAVKKLD 641
EYR++V L SWQDLKD MR+AG+V +AD K+ GV+EF + DMK A+ KLD
Sbjct: 143 EYRLIVENLSSRCSWQDLKDFMRQAGEVTYADAHKERTNEGVIEFRSYSDMKRALDKLD 201
>U30826-1|AAA93070.1| 272|Homo sapiens SRp40-1 protein.
Length = 272
Score = 57.6 bits (133), Expect = 4e-08
Identities = 30/58 (51%), Positives = 38/58 (65%), Gaps = 2/58 (3%)
Frame = +3
Query: 471 EYRVLVTGLPPSGSWQDLKDHMREAGDVCFADTF--KDGSGVVEFLRHEDMKYAVKKL 638
E R++V L SWQDLKD MR+AG+V FAD K GVVEF + D+K A++KL
Sbjct: 107 ENRLIVENLSSRVSWQDLKDFMRQAGEVTFADAHRPKLNEGVVEFASYGDLKNAIEKL 164
>BT007089-1|AAP35752.1| 272|Homo sapiens splicing factor,
arginine/serine-rich 5 protein.
Length = 272
Score = 57.6 bits (133), Expect = 4e-08
Identities = 30/58 (51%), Positives = 38/58 (65%), Gaps = 2/58 (3%)
Frame = +3
Query: 471 EYRVLVTGLPPSGSWQDLKDHMREAGDVCFADTF--KDGSGVVEFLRHEDMKYAVKKL 638
E R++V L SWQDLKD MR+AG+V FAD K GVVEF + D+K A++KL
Sbjct: 107 ENRLIVENLSSRVSWQDLKDFMRQAGEVTFADAHRPKLNEGVVEFASYGDLKNAIEKL 164
>BC040209-1|AAH40209.1| 272|Homo sapiens splicing factor,
arginine/serine-rich 5 protein.
Length = 272
Score = 57.6 bits (133), Expect = 4e-08
Identities = 30/58 (51%), Positives = 38/58 (65%), Gaps = 2/58 (3%)
Frame = +3
Query: 471 EYRVLVTGLPPSGSWQDLKDHMREAGDVCFADTF--KDGSGVVEFLRHEDMKYAVKKL 638
E R++V L SWQDLKD MR+AG+V FAD K GVVEF + D+K A++KL
Sbjct: 107 ENRLIVENLSSRVSWQDLKDFMRQAGEVTFADAHRPKLNEGVVEFASYGDLKNAIEKL 164
>BC018823-1|AAH18823.1| 272|Homo sapiens splicing factor,
arginine/serine-rich 5 protein.
Length = 272
Score = 57.6 bits (133), Expect = 4e-08
Identities = 30/58 (51%), Positives = 38/58 (65%), Gaps = 2/58 (3%)
Frame = +3
Query: 471 EYRVLVTGLPPSGSWQDLKDHMREAGDVCFADTF--KDGSGVVEFLRHEDMKYAVKKL 638
E R++V L SWQDLKD MR+AG+V FAD K GVVEF + D+K A++KL
Sbjct: 107 ENRLIVENLSSRVSWQDLKDFMRQAGEVTFADAHRPKLNEGVVEFASYGDLKNAIEKL 164
>AB209804-1|BAD93041.1| 326|Homo sapiens CS0DF038YO05 variant
protein.
Length = 326
Score = 45.2 bits (102), Expect = 2e-04
Identities = 23/43 (53%), Positives = 30/43 (69%), Gaps = 2/43 (4%)
Frame = +3
Query: 516 QDLKDHMREAGDVCFADTF--KDGSGVVEFLRHEDMKYAVKKL 638
+DLKD MR+AG+V FAD K GVVEF + D+K A++KL
Sbjct: 176 KDLKDFMRQAGEVTFADAHRPKLNEGVVEFASYGDLKNAIEKL 218
>AK023133-1|BAB14421.1| 576|Homo sapiens protein ( Homo sapiens
cDNA FLJ13071 fis, clone NT2RP3001792, moderately
similar to HETEROGENEOUS NUCLEAR RIBONUCLEOPROTEIN M. ).
Length = 576
Score = 42.3 bits (95), Expect = 0.001
Identities = 24/62 (38%), Positives = 36/62 (58%), Gaps = 7/62 (11%)
Frame = +3
Query: 477 RVLVTGLPPSGSWQDLKDHMRE-AGDVCFADTFKD------GSGVVEFLRHEDMKYAVKK 635
RV ++ +P WQ +KD MRE G+V + + FKD G GVVEF E +K A++
Sbjct: 101 RVFISNIPYDMKWQAIKDLMREKVGEVTYVELFKDAEGKSRGCGVVEFKDEEFVKKALET 160
Query: 636 LD 641
++
Sbjct: 161 MN 162
>AF106685-1|AAD43038.1| 547|Homo sapiens myelin gene expression
factor 2 protein.
Length = 547
Score = 42.3 bits (95), Expect = 0.001
Identities = 24/62 (38%), Positives = 36/62 (58%), Gaps = 7/62 (11%)
Frame = +3
Query: 477 RVLVTGLPPSGSWQDLKDHMRE-AGDVCFADTFKD------GSGVVEFLRHEDMKYAVKK 635
RV ++ +P WQ +KD MRE G+V + + FKD G GVVEF E +K A++
Sbjct: 48 RVFISNIPYDMKWQAIKDLMREKVGEVTYVELFKDAEGKSRGCGVVEFKDEEFVKKALET 107
Query: 636 LD 641
++
Sbjct: 108 MN 109
>AB037762-1|BAA92579.1| 620|Homo sapiens KIAA1341 protein protein.
Length = 620
Score = 42.3 bits (95), Expect = 0.001
Identities = 24/62 (38%), Positives = 36/62 (58%), Gaps = 7/62 (11%)
Frame = +3
Query: 477 RVLVTGLPPSGSWQDLKDHMRE-AGDVCFADTFKD------GSGVVEFLRHEDMKYAVKK 635
RV ++ +P WQ +KD MRE G+V + + FKD G GVVEF E +K A++
Sbjct: 121 RVFISNIPYDMKWQAIKDLMREKVGEVTYVELFKDAEGKSRGCGVVEFKDEEFVKKALET 180
Query: 636 LD 641
++
Sbjct: 181 MN 182
>L32611-1|AAL31359.1| 691|Homo sapiens ribonucleoprotein protein.
Length = 691
Score = 39.9 bits (89), Expect = 0.008
Identities = 23/63 (36%), Positives = 32/63 (50%), Gaps = 7/63 (11%)
Frame = +3
Query: 474 YRVLVTGLPPSGSWQDLKDHMRE-AGDVCFADTFKDGSG------VVEFLRHEDMKYAVK 632
YR +T +P WQ LKD ++E G+V + + D G VVEF E MK A +
Sbjct: 71 YRAFITNIPFDVKWQSLKDLVKEKVGEVTYVELLMDAEGKSRGCAVVEFKMEESMKKAAE 130
Query: 633 KLD 641
L+
Sbjct: 131 VLN 133
Score = 30.7 bits (66), Expect = 4.7
Identities = 19/60 (31%), Positives = 30/60 (50%), Gaps = 5/60 (8%)
Frame = +3
Query: 477 RVLVTGLPPSGSWQDLKDHMREAGDVCFADTFKD-----GSGVVEFLRHEDMKYAVKKLD 641
++ V LP +W+ LKD E G V +AD + G GVV+F E + A + ++
Sbjct: 615 QIFVRNLPFDFTWKMLKDKFNECGHVLYADIKMENGKSKGCGVVKFESPEVAERACRMMN 674
>L03532-1|AAA36192.1| 729|Homo sapiens M4 protein protein.
Length = 729
Score = 39.9 bits (89), Expect = 0.008
Identities = 23/63 (36%), Positives = 32/63 (50%), Gaps = 7/63 (11%)
Frame = +3
Query: 474 YRVLVTGLPPSGSWQDLKDHMRE-AGDVCFADTFKDGSG------VVEFLRHEDMKYAVK 632
YR +T +P WQ LKD ++E G+V + + D G VVEF E MK A +
Sbjct: 70 YRAFITNIPFDVKWQSLKDLVKEKVGEVTYVELLMDAEGKSRGCAVVEFKMEESMKKAAE 129
Query: 633 KLD 641
L+
Sbjct: 130 VLN 132
Score = 30.7 bits (66), Expect = 4.7
Identities = 19/60 (31%), Positives = 30/60 (50%), Gaps = 5/60 (8%)
Frame = +3
Query: 477 RVLVTGLPPSGSWQDLKDHMREAGDVCFADTFKD-----GSGVVEFLRHEDMKYAVKKLD 641
++ V LP +W+ LKD E G V +AD + G GVV+F E + A + ++
Sbjct: 653 QIFVRNLPFDFTWKMLKDKFNECGHVLYADIKMENGKSKGCGVVKFESPEVAERACRMMN 712
>BC019580-1|AAH19580.1| 730|Homo sapiens heterogeneous nuclear
ribonucleoprotein M protein.
Length = 730
Score = 39.9 bits (89), Expect = 0.008
Identities = 23/63 (36%), Positives = 32/63 (50%), Gaps = 7/63 (11%)
Frame = +3
Query: 474 YRVLVTGLPPSGSWQDLKDHMRE-AGDVCFADTFKDGSG------VVEFLRHEDMKYAVK 632
YR +T +P WQ LKD ++E G+V + + D G VVEF E MK A +
Sbjct: 71 YRAFITNIPFDVKWQSLKDLVKEKVGEVTYVELLMDAEGKSRGCAVVEFKMEESMKKAAE 130
Query: 633 KLD 641
L+
Sbjct: 131 VLN 133
Score = 30.7 bits (66), Expect = 4.7
Identities = 19/60 (31%), Positives = 30/60 (50%), Gaps = 5/60 (8%)
Frame = +3
Query: 477 RVLVTGLPPSGSWQDLKDHMREAGDVCFADTFKD-----GSGVVEFLRHEDMKYAVKKLD 641
++ V LP +W+ LKD E G V +AD + G GVV+F E + A + ++
Sbjct: 654 QIFVRNLPFDFTWKMLKDKFNECGHVLYADIKMENGKSKGCGVVKFESPEVAERACRMMN 713
>BC000138-1|AAH00138.2| 730|Homo sapiens heterogeneous nuclear
ribonucleoprotein M protein.
Length = 730
Score = 39.9 bits (89), Expect = 0.008
Identities = 23/63 (36%), Positives = 32/63 (50%), Gaps = 7/63 (11%)
Frame = +3
Query: 474 YRVLVTGLPPSGSWQDLKDHMRE-AGDVCFADTFKDGSG------VVEFLRHEDMKYAVK 632
YR +T +P WQ LKD ++E G+V + + D G VVEF E MK A +
Sbjct: 71 YRAFITNIPFDVKWQSLKDLVKEKVGEVTYVELLMDAEGKSRGCAVVEFKMEESMKKAAE 130
Query: 633 KLD 641
L+
Sbjct: 131 VLN 133
Score = 30.7 bits (66), Expect = 4.7
Identities = 19/60 (31%), Positives = 30/60 (50%), Gaps = 5/60 (8%)
Frame = +3
Query: 477 RVLVTGLPPSGSWQDLKDHMREAGDVCFADTFKD-----GSGVVEFLRHEDMKYAVKKLD 641
++ V LP +W+ LKD E G V +AD + G GVV+F E + A + ++
Sbjct: 654 QIFVRNLPFDFTWKMLKDKFNECGHVLYADIKMENGKSKGCGVVKFESPEVAERACRMMN 713
>AF061832-1|AAC16002.1| 691|Homo sapiens M4 protein deletion mutant
protein.
Length = 691
Score = 39.9 bits (89), Expect = 0.008
Identities = 23/63 (36%), Positives = 32/63 (50%), Gaps = 7/63 (11%)
Frame = +3
Query: 474 YRVLVTGLPPSGSWQDLKDHMRE-AGDVCFADTFKDGSG------VVEFLRHEDMKYAVK 632
YR +T +P WQ LKD ++E G+V + + D G VVEF E MK A +
Sbjct: 71 YRAFITNIPFDVKWQSLKDLVKEKVGEVTYVELLMDAEGKSRGCAVVEFKMEESMKKAAE 130
Query: 633 KLD 641
L+
Sbjct: 131 VLN 133
Score = 30.7 bits (66), Expect = 4.7
Identities = 19/60 (31%), Positives = 30/60 (50%), Gaps = 5/60 (8%)
Frame = +3
Query: 477 RVLVTGLPPSGSWQDLKDHMREAGDVCFADTFKD-----GSGVVEFLRHEDMKYAVKKLD 641
++ V LP +W+ LKD E G V +AD + G GVV+F E + A + ++
Sbjct: 615 QIFVRNLPFDFTWKMLKDKFNECGHVLYADIKMENGKSKGCGVVKFESPEVAERACRMMN 674
>CR457272-1|CAG33553.1| 357|Homo sapiens PSPC1 protein.
Length = 357
Score = 33.5 bits (73), Expect = 0.67
Identities = 13/29 (44%), Positives = 18/29 (62%)
Frame = +3
Query: 129 GSSSNRNECRIYVGNLPPDIRTKDIQDLF 215
G + CR++VGNLP DI +D + LF
Sbjct: 38 GEKTYTQRCRLFVGNLPTDITEEDFKRLF 66
>BC014184-1|AAH14184.2| 393|Homo sapiens PSPC1 protein protein.
Length = 393
Score = 33.5 bits (73), Expect = 0.67
Identities = 13/29 (44%), Positives = 18/29 (62%)
Frame = +3
Query: 129 GSSSNRNECRIYVGNLPPDIRTKDIQDLF 215
G + CR++VGNLP DI +D + LF
Sbjct: 74 GEKTYTQRCRLFVGNLPTDITEEDFKRLF 102
>AL354808-5|CAI41005.1| 248|Homo sapiens paraspeckle component 1
protein.
Length = 248
Score = 33.5 bits (73), Expect = 0.67
Identities = 13/29 (44%), Positives = 18/29 (62%)
Frame = +3
Query: 129 GSSSNRNECRIYVGNLPPDIRTKDIQDLF 215
G + CR++VGNLP DI +D + LF
Sbjct: 74 GEKTYTQRCRLFVGNLPTDITEEDFKRLF 102
>AL354808-4|CAI41004.1| 523|Homo sapiens paraspeckle component 1
protein.
Length = 523
Score = 33.5 bits (73), Expect = 0.67
Identities = 13/29 (44%), Positives = 18/29 (62%)
Frame = +3
Query: 129 GSSSNRNECRIYVGNLPPDIRTKDIQDLF 215
G + CR++VGNLP DI +D + LF
Sbjct: 74 GEKTYTQRCRLFVGNLPTDITEEDFKRLF 102
>AK001817-1|BAA91924.1| 357|Homo sapiens protein ( Homo sapiens
cDNA FLJ10955 fis, clone PLACE1000406, moderately
similar to PTB-ASSOCIATED SPLICING FACTOR. ).
Length = 357
Score = 33.5 bits (73), Expect = 0.67
Identities = 13/29 (44%), Positives = 18/29 (62%)
Frame = +3
Query: 129 GSSSNRNECRIYVGNLPPDIRTKDIQDLF 215
G + CR++VGNLP DI +D + LF
Sbjct: 38 GEKTYTQRCRLFVGNLPTDITEEDFKRLF 66
>AF449627-1|AAL59602.1| 393|Homo sapiens paraspeckle protein 1 beta
isoform protein.
Length = 393
Score = 33.5 bits (73), Expect = 0.67
Identities = 13/29 (44%), Positives = 18/29 (62%)
Frame = +3
Query: 129 GSSSNRNECRIYVGNLPPDIRTKDIQDLF 215
G + CR++VGNLP DI +D + LF
Sbjct: 74 GEKTYTQRCRLFVGNLPTDITEEDFKRLF 102
>AF448795-1|AAL59601.1| 523|Homo sapiens paraspeckle protein 1
alpha isoform protein.
Length = 523
Score = 33.5 bits (73), Expect = 0.67
Identities = 13/29 (44%), Positives = 18/29 (62%)
Frame = +3
Query: 129 GSSSNRNECRIYVGNLPPDIRTKDIQDLF 215
G + CR++VGNLP DI +D + LF
Sbjct: 74 GEKTYTQRCRLFVGNLPTDITEEDFKRLF 102
>Y11289-1|CAA72157.1| 471|Homo sapiens p54nrb protein.
Length = 471
Score = 31.9 bits (69), Expect = 2.1
Identities = 13/35 (37%), Positives = 21/35 (60%)
Frame = +3
Query: 129 GSSSNRNECRIYVGNLPPDIRTKDIQDLFYNVRKS 233
G + R++VGNLPPDI ++++ LF K+
Sbjct: 66 GEKTFTQRSRLFVGNLPPDITEEEMRKLFEKYGKA 100
>U89867-1|AAC51852.1| 471|Homo sapiens nuclear matrix protein 55
protein.
Length = 471
Score = 31.9 bits (69), Expect = 2.1
Identities = 13/35 (37%), Positives = 21/35 (60%)
Frame = +3
Query: 129 GSSSNRNECRIYVGNLPPDIRTKDIQDLFYNVRKS 233
G + R++VGNLPPDI ++++ LF K+
Sbjct: 66 GEKTFTQRSRLFVGNLPPDITEEEMRKLFEKYGKA 100
>U02493-1|AAA03427.1| 471|Homo sapiens 54 kDa protein protein.
Length = 471
Score = 31.9 bits (69), Expect = 2.1
Identities = 13/35 (37%), Positives = 21/35 (60%)
Frame = +3
Query: 129 GSSSNRNECRIYVGNLPPDIRTKDIQDLFYNVRKS 233
G + R++VGNLPPDI ++++ LF K+
Sbjct: 66 GEKTFTQRSRLFVGNLPPDITEEEMRKLFEKYGKA 100
>L14599-1|AAC37578.1| 471|Homo sapiens protein ( Human mRNA,
complete cds. ).
Length = 471
Score = 31.9 bits (69), Expect = 2.1
Identities = 13/35 (37%), Positives = 21/35 (60%)
Frame = +3
Query: 129 GSSSNRNECRIYVGNLPPDIRTKDIQDLFYNVRKS 233
G + R++VGNLPPDI ++++ LF K+
Sbjct: 66 GEKTFTQRSRLFVGNLPPDITEEEMRKLFEKYGKA 100
>CR456761-1|CAG33042.1| 471|Homo sapiens NONO protein.
Length = 471
Score = 31.9 bits (69), Expect = 2.1
Identities = 13/35 (37%), Positives = 21/35 (60%)
Frame = +3
Query: 129 GSSSNRNECRIYVGNLPPDIRTKDIQDLFYNVRKS 233
G + R++VGNLPPDI ++++ LF K+
Sbjct: 66 GEKTFTQRSRLFVGNLPPDITEEEMRKLFEKYGKA 100
>BC069639-1|AAH69639.1| 471|Homo sapiens non-POU domain containing,
octamer-binding protein.
Length = 471
Score = 31.9 bits (69), Expect = 2.1
Identities = 13/35 (37%), Positives = 21/35 (60%)
Frame = +3
Query: 129 GSSSNRNECRIYVGNLPPDIRTKDIQDLFYNVRKS 233
G + R++VGNLPPDI ++++ LF K+
Sbjct: 66 GEKTFTQRSRLFVGNLPPDITEEEMRKLFEKYGKA 100
>BC069616-1|AAH69616.1| 471|Homo sapiens non-POU domain containing,
octamer-binding protein.
Length = 471
Score = 31.9 bits (69), Expect = 2.1
Identities = 13/35 (37%), Positives = 21/35 (60%)
Frame = +3
Query: 129 GSSSNRNECRIYVGNLPPDIRTKDIQDLFYNVRKS 233
G + R++VGNLPPDI ++++ LF K+
Sbjct: 66 GEKTFTQRSRLFVGNLPPDITEEEMRKLFEKYGKA 100
>BC028299-1|AAH28299.1| 471|Homo sapiens non-POU domain containing,
octamer-binding protein.
Length = 471
Score = 31.9 bits (69), Expect = 2.1
Identities = 13/35 (37%), Positives = 21/35 (60%)
Frame = +3
Query: 129 GSSSNRNECRIYVGNLPPDIRTKDIQDLFYNVRKS 233
G + R++VGNLPPDI ++++ LF K+
Sbjct: 66 GEKTFTQRSRLFVGNLPPDITEEEMRKLFEKYGKA 100
>BC012141-1|AAH12141.1| 471|Homo sapiens NONO protein protein.
Length = 471
Score = 31.9 bits (69), Expect = 2.1
Identities = 13/35 (37%), Positives = 21/35 (60%)
Frame = +3
Query: 129 GSSSNRNECRIYVGNLPPDIRTKDIQDLFYNVRKS 233
G + R++VGNLPPDI ++++ LF K+
Sbjct: 66 GEKTFTQRSRLFVGNLPPDITEEEMRKLFEKYGKA 100
>BC003129-1|AAH03129.1| 471|Homo sapiens NONO protein protein.
Length = 471
Score = 31.9 bits (69), Expect = 2.1
Identities = 13/35 (37%), Positives = 21/35 (60%)
Frame = +3
Query: 129 GSSSNRNECRIYVGNLPPDIRTKDIQDLFYNVRKS 233
G + R++VGNLPPDI ++++ LF K+
Sbjct: 66 GEKTFTQRSRLFVGNLPPDITEEEMRKLFEKYGKA 100
>BC002364-1|AAH02364.1| 471|Homo sapiens non-POU domain containing,
octamer-binding protein.
Length = 471
Score = 31.9 bits (69), Expect = 2.1
Identities = 13/35 (37%), Positives = 21/35 (60%)
Frame = +3
Query: 129 GSSSNRNECRIYVGNLPPDIRTKDIQDLFYNVRKS 233
G + R++VGNLPPDI ++++ LF K+
Sbjct: 66 GEKTFTQRSRLFVGNLPPDITEEEMRKLFEKYGKA 100
>X70944-1|CAA50283.1| 707|Homo sapiens PTB-associated splicing
factor protein.
Length = 707
Score = 31.1 bits (67), Expect = 3.6
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = +3
Query: 129 GSSSNRNECRIYVGNLPPDIRTKDIQDLF 215
G + CR++VGNLP DI + + LF
Sbjct: 289 GEKTYTQRCRLFVGNLPADITEDEFKRLF 317
>BC110335-1|AAI10336.1| 450|Homo sapiens alanine-glyoxylate
aminotransferase 2-like 2 protein.
Length = 450
Score = 31.1 bits (67), Expect = 3.6
Identities = 13/33 (39%), Positives = 21/33 (63%)
Frame = +3
Query: 495 LPPSGSWQDLKDHMREAGDVCFADTFKDGSGVV 593
+PP+G + + +H+R+AG V AD + G G V
Sbjct: 223 IPPAGYFSQVAEHIRKAGGVFVADEIQVGFGRV 255
>BC051192-1|AAH51192.1| 707|Homo sapiens splicing factor
proline/glutamine-rich (polypyrimidine tract binding
protein as protein.
Length = 707
Score = 31.1 bits (67), Expect = 3.6
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = +3
Query: 129 GSSSNRNECRIYVGNLPPDIRTKDIQDLF 215
G + CR++VGNLP DI + + LF
Sbjct: 289 GEKTYTQRCRLFVGNLPADITEDEFKRLF 317
>BC037567-1|AAH37567.1| 450|Homo sapiens alanine-glyoxylate
aminotransferase 2-like 2 protein.
Length = 450
Score = 31.1 bits (67), Expect = 3.6
Identities = 13/33 (39%), Positives = 21/33 (63%)
Frame = +3
Query: 495 LPPSGSWQDLKDHMREAGDVCFADTFKDGSGVV 593
+PP+G + + +H+R+AG V AD + G G V
Sbjct: 223 IPPAGYFSQVAEHIRKAGGVFVADEIQVGFGRV 255
>BC027708-1|AAH27708.1| 525|Homo sapiens SFPQ protein protein.
Length = 525
Score = 31.1 bits (67), Expect = 3.6
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = +3
Query: 129 GSSSNRNECRIYVGNLPPDIRTKDIQDLF 215
G + CR++VGNLP DI + + LF
Sbjct: 289 GEKTYTQRCRLFVGNLPADITEDEFKRLF 317
>BC004534-1|AAH04534.2| 634|Homo sapiens SFPQ protein protein.
Length = 634
Score = 31.1 bits (67), Expect = 3.6
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = +3
Query: 129 GSSSNRNECRIYVGNLPPDIRTKDIQDLF 215
G + CR++VGNLP DI + + LF
Sbjct: 216 GEKTYTQRCRLFVGNLPADITEDEFKRLF 244
>AL590434-2|CAI12467.1| 707|Homo sapiens splicing factor
proline/glutamine-rich (polypyrimidine tract binding
protein as protein.
Length = 707
Score = 31.1 bits (67), Expect = 3.6
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = +3
Query: 129 GSSSNRNECRIYVGNLPPDIRTKDIQDLF 215
G + CR++VGNLP DI + + LF
Sbjct: 289 GEKTYTQRCRLFVGNLPADITEDEFKRLF 317
>X72018-1|CAA50897.1| 570|Homo sapiens ORF protein.
Length = 570
Score = 30.7 bits (66), Expect = 4.7
Identities = 19/60 (31%), Positives = 30/60 (50%), Gaps = 5/60 (8%)
Frame = +3
Query: 477 RVLVTGLPPSGSWQDLKDHMREAGDVCFADTFKD-----GSGVVEFLRHEDMKYAVKKLD 641
++ V LP +W+ LKD E G V +AD + G GVV+F E + A + ++
Sbjct: 494 QIFVRNLPFDFTWKMLKDKFNECGHVLYADIKMENGKSKGCGVVKFESPEVAERACRMMN 553
>BC064588-1|AAH64588.1| 285|Homo sapiens HNRPM protein protein.
Length = 285
Score = 30.7 bits (66), Expect = 4.7
Identities = 19/60 (31%), Positives = 30/60 (50%), Gaps = 5/60 (8%)
Frame = +3
Query: 477 RVLVTGLPPSGSWQDLKDHMREAGDVCFADTFKD-----GSGVVEFLRHEDMKYAVKKLD 641
++ V LP +W+ LKD E G V +AD + G GVV+F E + A + ++
Sbjct: 209 QIFVRNLPFDFTWKMLKDKFNECGHVLYADIKMENGKSKGCGVVKFESPEVAERACRMMN 268
>BC008895-1|AAH08895.2| 425|Homo sapiens HNRPM protein protein.
Length = 425
Score = 30.7 bits (66), Expect = 4.7
Identities = 19/60 (31%), Positives = 30/60 (50%), Gaps = 5/60 (8%)
Frame = +3
Query: 477 RVLVTGLPPSGSWQDLKDHMREAGDVCFADTFKD-----GSGVVEFLRHEDMKYAVKKLD 641
++ V LP +W+ LKD E G V +AD + G GVV+F E + A + ++
Sbjct: 349 QIFVRNLPFDFTWKMLKDKFNECGHVLYADIKMENGKSKGCGVVKFESPEVAERACRMMN 408
>AB209733-1|BAD92970.1| 615|Homo sapiens heterogeneous nuclear
ribonucleoprotein M isoform a variant protein.
Length = 615
Score = 30.7 bits (66), Expect = 4.7
Identities = 19/60 (31%), Positives = 30/60 (50%), Gaps = 5/60 (8%)
Frame = +3
Query: 477 RVLVTGLPPSGSWQDLKDHMREAGDVCFADTFKD-----GSGVVEFLRHEDMKYAVKKLD 641
++ V LP +W+ LKD E G V +AD + G GVV+F E + A + ++
Sbjct: 539 QIFVRNLPFDFTWKMLKDKFNECGHVLYADIKMENGKSKGCGVVKFESPEVAERACRMMN 598
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 83,115,378
Number of Sequences: 237096
Number of extensions: 1524261
Number of successful extensions: 4123
Number of sequences better than 10.0: 67
Number of HSP's better than 10.0 without gapping: 3853
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4097
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7310122300
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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