Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP02_F_N11
(654 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY051919-1|AAK93343.1| 255|Drosophila melanogaster LD40489p pro... 126 2e-29
AF234157-1|AAF60294.1| 255|Drosophila melanogaster SR family sp... 126 2e-29
AF232773-1|AAF43413.1| 255|Drosophila melanogaster SR family sp... 126 2e-29
AE014297-2188|AAF55300.1| 255|Drosophila melanogaster CG6987-PA... 126 2e-29
X62599-1|CAA44483.1| 376|Drosophila melanogaster 52-kD bracketi... 68 1e-11
X58720-1|CAA41556.1| 350|Drosophila melanogaster SRp55 protein. 68 1e-11
BT003286-1|AAO25044.1| 350|Drosophila melanogaster GM10155p pro... 68 1e-11
BT001495-1|AAN71250.1| 350|Drosophila melanogaster LD30815p pro... 68 1e-11
AY113327-1|AAM29332.1| 350|Drosophila melanogaster AT29232p pro... 68 1e-11
AE014297-1720|AAF54968.1| 329|Drosophila melanogaster CG10851-P... 68 1e-11
AE014297-1718|AAN13575.1| 350|Drosophila melanogaster CG10851-P... 68 1e-11
AE014297-1717|AAF54969.2| 350|Drosophila melanogaster CG10851-P... 68 1e-11
AE014297-1719|AAN13576.1| 346|Drosophila melanogaster CG10851-P... 56 3e-08
AY118772-1|AAM50632.1| 430|Drosophila melanogaster GH11495p pro... 46 3e-05
AE014297-952|AAF54387.1| 632|Drosophila melanogaster CG9373-PA ... 46 3e-05
BT004500-1|AAO42664.1| 216|Drosophila melanogaster GH08123p pro... 42 6e-04
BT001750-1|AAN71505.1| 216|Drosophila melanogaster RH01580p pro... 42 6e-04
BT001417-1|AAN71172.1| 216|Drosophila melanogaster GH12433p pro... 42 6e-04
AY069302-1|AAL39447.1| 216|Drosophila melanogaster HL03687p pro... 42 6e-04
AE014297-1724|AAX52949.1| 216|Drosophila melanogaster CG10851-P... 42 6e-04
AE014297-1723|AAN13579.1| 216|Drosophila melanogaster CG10851-P... 42 6e-04
AY061111-1|AAL28659.1| 494|Drosophila melanogaster LD09584p pro... 34 0.15
AE014296-2311|AAF49794.2| 494|Drosophila melanogaster CG8745-PA... 34 0.15
AF492764-2|AAM11674.1| 849|Drosophila melanogaster pol protein ... 32 0.59
U73846-1|AAB61993.1| 808|Drosophila melanogaster testis-specifi... 31 1.0
U58976-1|AAB58464.1| 604|Drosophila melanogaster bruno protein. 31 1.0
AY051758-1|AAK93182.1| 604|Drosophila melanogaster LD29068p pro... 31 1.0
AF541948-2|AAN34651.1| 1006|Drosophila melanogaster pol protein ... 31 1.0
AE014134-2183|AAN10812.1| 604|Drosophila melanogaster CG31762-P... 31 1.0
AE014134-2182|AAN10811.1| 616|Drosophila melanogaster CG31762-P... 31 1.0
AE014134-2181|AAN10810.1| 810|Drosophila melanogaster CG31762-P... 31 1.0
AY061826-1|AAL27637.1| 388|Drosophila melanogaster GH21984p pro... 31 1.4
AY061516-1|AAL29064.1| 418|Drosophila melanogaster LD46870p pro... 31 1.4
AE014297-14|AAF52166.2| 418|Drosophila melanogaster CG14641-PA ... 31 1.4
AE014296-3519|AAF51708.2| 388|Drosophila melanogaster CG7605-PA... 31 1.4
AY052060-1|AAK93484.1| 495|Drosophila melanogaster LP09632p pro... 31 1.8
AJ295236-1|CAC16735.1| 495|Drosophila melanogaster painting of ... 31 1.8
AE013599-3935|AAM68326.1| 495|Drosophila melanogaster CG3691-PB... 31 1.8
AE013599-3934|AAF47254.1| 495|Drosophila melanogaster CG3691-PA... 31 1.8
BT025050-1|ABE73221.1| 624|Drosophila melanogaster IP16114p pro... 29 4.2
AE014297-1294|AAF54635.3| 2243|Drosophila melanogaster CG5270-PB... 29 4.2
AE014298-2122|AAF48438.1| 277|Drosophila melanogaster CG15032-P... 28 9.6
>AY051919-1|AAK93343.1| 255|Drosophila melanogaster LD40489p
protein.
Length = 255
Score = 126 bits (305), Expect = 2e-29
Identities = 55/61 (90%), Positives = 59/61 (96%)
Frame = +3
Query: 471 EYRVLVTGLPPSGSWQDLKDHMREAGDVCFADTFKDGSGVVEFLRHEDMKYAVKKLDDSX 650
+YRV+VTGLP SGSWQDLKDHMREAGDVCFADT+KDGSGVVEFLRHEDMKYA+KKLDDS
Sbjct: 114 QYRVMVTGLPASGSWQDLKDHMREAGDVCFADTYKDGSGVVEFLRHEDMKYAIKKLDDSR 173
Query: 651 F 653
F
Sbjct: 174 F 174
Score = 58.8 bits (136), Expect = 6e-09
Identities = 25/30 (83%), Positives = 27/30 (90%)
Frame = +3
Query: 141 NRNECRIYVGNLPPDIRTKDIQDLFYNVRK 230
+RNECRIYVGNLPPDIRTKDIQDLF+ K
Sbjct: 3 SRNECRIYVGNLPPDIRTKDIQDLFHKFGK 32
Score = 53.6 bits (123), Expect = 2e-07
Identities = 23/26 (88%), Positives = 24/26 (92%)
Frame = +1
Query: 214 FTTFGKVTFVDLKNRKGPPFAFVEFE 291
F FGKVTFVDLKNR+GPPFAFVEFE
Sbjct: 27 FHKFGKVTFVDLKNRRGPPFAFVEFE 52
Score = 31.5 bits (68), Expect = 1.0
Identities = 12/12 (100%), Positives = 12/12 (100%)
Frame = +2
Query: 332 GYDYDGYRLRVE 367
GYDYDGYRLRVE
Sbjct: 66 GYDYDGYRLRVE 77
Score = 28.3 bits (60), Expect = 9.6
Identities = 16/52 (30%), Positives = 23/52 (44%)
Frame = +3
Query: 471 EYRVLVTGLPPSGSWQDLKDHMREAGDVCFADTFKDGSGVVEFLRHEDMKYA 626
E R+ V LPP +D++D + G V F D F+ ED + A
Sbjct: 6 ECRIYVGNLPPDIRTKDIQDLFHKFGKVTFVDLKNRRGPPFAFVEFEDARDA 57
>AF234157-1|AAF60294.1| 255|Drosophila melanogaster SR family
splicing factor protein.
Length = 255
Score = 126 bits (305), Expect = 2e-29
Identities = 55/61 (90%), Positives = 59/61 (96%)
Frame = +3
Query: 471 EYRVLVTGLPPSGSWQDLKDHMREAGDVCFADTFKDGSGVVEFLRHEDMKYAVKKLDDSX 650
+YRV+VTGLP SGSWQDLKDHMREAGDVCFADT+KDGSGVVEFLRHEDMKYA+KKLDDS
Sbjct: 114 QYRVMVTGLPASGSWQDLKDHMREAGDVCFADTYKDGSGVVEFLRHEDMKYAIKKLDDSR 173
Query: 651 F 653
F
Sbjct: 174 F 174
Score = 58.8 bits (136), Expect = 6e-09
Identities = 25/30 (83%), Positives = 27/30 (90%)
Frame = +3
Query: 141 NRNECRIYVGNLPPDIRTKDIQDLFYNVRK 230
+RNECRIYVGNLPPDIRTKDIQDLF+ K
Sbjct: 3 SRNECRIYVGNLPPDIRTKDIQDLFHKFGK 32
Score = 53.6 bits (123), Expect = 2e-07
Identities = 23/26 (88%), Positives = 24/26 (92%)
Frame = +1
Query: 214 FTTFGKVTFVDLKNRKGPPFAFVEFE 291
F FGKVTFVDLKNR+GPPFAFVEFE
Sbjct: 27 FHKFGKVTFVDLKNRRGPPFAFVEFE 52
Score = 31.5 bits (68), Expect = 1.0
Identities = 12/12 (100%), Positives = 12/12 (100%)
Frame = +2
Query: 332 GYDYDGYRLRVE 367
GYDYDGYRLRVE
Sbjct: 66 GYDYDGYRLRVE 77
Score = 28.3 bits (60), Expect = 9.6
Identities = 16/52 (30%), Positives = 23/52 (44%)
Frame = +3
Query: 471 EYRVLVTGLPPSGSWQDLKDHMREAGDVCFADTFKDGSGVVEFLRHEDMKYA 626
E R+ V LPP +D++D + G V F D F+ ED + A
Sbjct: 6 ECRIYVGNLPPDIRTKDIQDLFHKFGKVTFVDLKNRRGPPFAFVEFEDARDA 57
>AF232773-1|AAF43413.1| 255|Drosophila melanogaster SR family
splicing factor SF2 protein.
Length = 255
Score = 126 bits (305), Expect = 2e-29
Identities = 55/61 (90%), Positives = 59/61 (96%)
Frame = +3
Query: 471 EYRVLVTGLPPSGSWQDLKDHMREAGDVCFADTFKDGSGVVEFLRHEDMKYAVKKLDDSX 650
+YRV+VTGLP SGSWQDLKDHMREAGDVCFADT+KDGSGVVEFLRHEDMKYA+KKLDDS
Sbjct: 114 QYRVMVTGLPASGSWQDLKDHMREAGDVCFADTYKDGSGVVEFLRHEDMKYAIKKLDDSR 173
Query: 651 F 653
F
Sbjct: 174 F 174
Score = 58.8 bits (136), Expect = 6e-09
Identities = 25/30 (83%), Positives = 27/30 (90%)
Frame = +3
Query: 141 NRNECRIYVGNLPPDIRTKDIQDLFYNVRK 230
+RNECRIYVGNLPPDIRTKDIQDLF+ K
Sbjct: 3 SRNECRIYVGNLPPDIRTKDIQDLFHKFGK 32
Score = 53.6 bits (123), Expect = 2e-07
Identities = 23/26 (88%), Positives = 24/26 (92%)
Frame = +1
Query: 214 FTTFGKVTFVDLKNRKGPPFAFVEFE 291
F FGKVTFVDLKNR+GPPFAFVEFE
Sbjct: 27 FHKFGKVTFVDLKNRRGPPFAFVEFE 52
Score = 31.5 bits (68), Expect = 1.0
Identities = 12/12 (100%), Positives = 12/12 (100%)
Frame = +2
Query: 332 GYDYDGYRLRVE 367
GYDYDGYRLRVE
Sbjct: 66 GYDYDGYRLRVE 77
Score = 28.3 bits (60), Expect = 9.6
Identities = 16/52 (30%), Positives = 23/52 (44%)
Frame = +3
Query: 471 EYRVLVTGLPPSGSWQDLKDHMREAGDVCFADTFKDGSGVVEFLRHEDMKYA 626
E R+ V LPP +D++D + G V F D F+ ED + A
Sbjct: 6 ECRIYVGNLPPDIRTKDIQDLFHKFGKVTFVDLKNRRGPPFAFVEFEDARDA 57
>AE014297-2188|AAF55300.1| 255|Drosophila melanogaster CG6987-PA
protein.
Length = 255
Score = 126 bits (305), Expect = 2e-29
Identities = 55/61 (90%), Positives = 59/61 (96%)
Frame = +3
Query: 471 EYRVLVTGLPPSGSWQDLKDHMREAGDVCFADTFKDGSGVVEFLRHEDMKYAVKKLDDSX 650
+YRV+VTGLP SGSWQDLKDHMREAGDVCFADT+KDGSGVVEFLRHEDMKYA+KKLDDS
Sbjct: 114 QYRVMVTGLPASGSWQDLKDHMREAGDVCFADTYKDGSGVVEFLRHEDMKYAIKKLDDSR 173
Query: 651 F 653
F
Sbjct: 174 F 174
Score = 58.8 bits (136), Expect = 6e-09
Identities = 25/30 (83%), Positives = 27/30 (90%)
Frame = +3
Query: 141 NRNECRIYVGNLPPDIRTKDIQDLFYNVRK 230
+RNECRIYVGNLPPDIRTKDIQDLF+ K
Sbjct: 3 SRNECRIYVGNLPPDIRTKDIQDLFHKFGK 32
Score = 53.6 bits (123), Expect = 2e-07
Identities = 23/26 (88%), Positives = 24/26 (92%)
Frame = +1
Query: 214 FTTFGKVTFVDLKNRKGPPFAFVEFE 291
F FGKVTFVDLKNR+GPPFAFVEFE
Sbjct: 27 FHKFGKVTFVDLKNRRGPPFAFVEFE 52
Score = 31.5 bits (68), Expect = 1.0
Identities = 12/12 (100%), Positives = 12/12 (100%)
Frame = +2
Query: 332 GYDYDGYRLRVE 367
GYDYDGYRLRVE
Sbjct: 66 GYDYDGYRLRVE 77
Score = 28.3 bits (60), Expect = 9.6
Identities = 16/52 (30%), Positives = 23/52 (44%)
Frame = +3
Query: 471 EYRVLVTGLPPSGSWQDLKDHMREAGDVCFADTFKDGSGVVEFLRHEDMKYA 626
E R+ V LPP +D++D + G V F D F+ ED + A
Sbjct: 6 ECRIYVGNLPPDIRTKDIQDLFHKFGKVTFVDLKNRRGPPFAFVEFEDARDA 57
>X62599-1|CAA44483.1| 376|Drosophila melanogaster 52-kD bracketing
protein protein.
Length = 376
Score = 68.1 bits (159), Expect = 1e-11
Identities = 33/61 (54%), Positives = 42/61 (68%), Gaps = 2/61 (3%)
Frame = +3
Query: 471 EYRVLVTGLPPSGSWQDLKDHMREAGDVCFADTFKD--GSGVVEFLRHEDMKYAVKKLDD 644
EYR++V L SWQDLKD+MR+AG+V +AD K GVVEF DMK A++KLDD
Sbjct: 119 EYRLIVENLSSRVSWQDLKDYMRQAGEVTYADAHKQRRNEGVVEFASLSDMKTAIEKLDD 178
Query: 645 S 647
+
Sbjct: 179 T 179
>X58720-1|CAA41556.1| 350|Drosophila melanogaster SRp55 protein.
Length = 350
Score = 68.1 bits (159), Expect = 1e-11
Identities = 33/61 (54%), Positives = 42/61 (68%), Gaps = 2/61 (3%)
Frame = +3
Query: 471 EYRVLVTGLPPSGSWQDLKDHMREAGDVCFADTFKD--GSGVVEFLRHEDMKYAVKKLDD 644
EYR++V L SWQDLKD+MR+AG+V +AD K GVVEF DMK A++KLDD
Sbjct: 114 EYRLIVENLSSRVSWQDLKDYMRQAGEVTYADAHKQRRNEGVVEFASLSDMKTAIEKLDD 173
Query: 645 S 647
+
Sbjct: 174 T 174
>BT003286-1|AAO25044.1| 350|Drosophila melanogaster GM10155p
protein.
Length = 350
Score = 68.1 bits (159), Expect = 1e-11
Identities = 33/61 (54%), Positives = 42/61 (68%), Gaps = 2/61 (3%)
Frame = +3
Query: 471 EYRVLVTGLPPSGSWQDLKDHMREAGDVCFADTFKD--GSGVVEFLRHEDMKYAVKKLDD 644
EYR++V L SWQDLKD+MR+AG+V +AD K GVVEF DMK A++KLDD
Sbjct: 114 EYRLIVENLSSRVSWQDLKDYMRQAGEVTYADAHKQRRNEGVVEFASLSDMKTAIEKLDD 173
Query: 645 S 647
+
Sbjct: 174 T 174
>BT001495-1|AAN71250.1| 350|Drosophila melanogaster LD30815p
protein.
Length = 350
Score = 68.1 bits (159), Expect = 1e-11
Identities = 33/61 (54%), Positives = 42/61 (68%), Gaps = 2/61 (3%)
Frame = +3
Query: 471 EYRVLVTGLPPSGSWQDLKDHMREAGDVCFADTFKD--GSGVVEFLRHEDMKYAVKKLDD 644
EYR++V L SWQDLKD+MR+AG+V +AD K GVVEF DMK A++KLDD
Sbjct: 114 EYRLIVENLSSRVSWQDLKDYMRQAGEVTYADAHKQRRNEGVVEFASLSDMKTAIEKLDD 173
Query: 645 S 647
+
Sbjct: 174 T 174
>AY113327-1|AAM29332.1| 350|Drosophila melanogaster AT29232p
protein.
Length = 350
Score = 68.1 bits (159), Expect = 1e-11
Identities = 33/61 (54%), Positives = 42/61 (68%), Gaps = 2/61 (3%)
Frame = +3
Query: 471 EYRVLVTGLPPSGSWQDLKDHMREAGDVCFADTFKD--GSGVVEFLRHEDMKYAVKKLDD 644
EYR++V L SWQDLKD+MR+AG+V +AD K GVVEF DMK A++KLDD
Sbjct: 114 EYRLIVENLSSRVSWQDLKDYMRQAGEVTYADAHKQRRNEGVVEFASLSDMKTAIEKLDD 173
Query: 645 S 647
+
Sbjct: 174 T 174
>AE014297-1720|AAF54968.1| 329|Drosophila melanogaster CG10851-PB,
isoform B protein.
Length = 329
Score = 68.1 bits (159), Expect = 1e-11
Identities = 33/61 (54%), Positives = 42/61 (68%), Gaps = 2/61 (3%)
Frame = +3
Query: 471 EYRVLVTGLPPSGSWQDLKDHMREAGDVCFADTFKD--GSGVVEFLRHEDMKYAVKKLDD 644
EYR++V L SWQDLKD+MR+AG+V +AD K GVVEF DMK A++KLDD
Sbjct: 119 EYRLIVENLSSRVSWQDLKDYMRQAGEVTYADAHKQRRNEGVVEFASLSDMKTAIEKLDD 178
Query: 645 S 647
+
Sbjct: 179 T 179
>AE014297-1718|AAN13575.1| 350|Drosophila melanogaster CG10851-PC,
isoform C protein.
Length = 350
Score = 68.1 bits (159), Expect = 1e-11
Identities = 33/61 (54%), Positives = 42/61 (68%), Gaps = 2/61 (3%)
Frame = +3
Query: 471 EYRVLVTGLPPSGSWQDLKDHMREAGDVCFADTFKD--GSGVVEFLRHEDMKYAVKKLDD 644
EYR++V L SWQDLKD+MR+AG+V +AD K GVVEF DMK A++KLDD
Sbjct: 114 EYRLIVENLSSRVSWQDLKDYMRQAGEVTYADAHKQRRNEGVVEFASLSDMKTAIEKLDD 173
Query: 645 S 647
+
Sbjct: 174 T 174
>AE014297-1717|AAF54969.2| 350|Drosophila melanogaster CG10851-PA,
isoform A protein.
Length = 350
Score = 68.1 bits (159), Expect = 1e-11
Identities = 33/61 (54%), Positives = 42/61 (68%), Gaps = 2/61 (3%)
Frame = +3
Query: 471 EYRVLVTGLPPSGSWQDLKDHMREAGDVCFADTFKD--GSGVVEFLRHEDMKYAVKKLDD 644
EYR++V L SWQDLKD+MR+AG+V +AD K GVVEF DMK A++KLDD
Sbjct: 114 EYRLIVENLSSRVSWQDLKDYMRQAGEVTYADAHKQRRNEGVVEFASLSDMKTAIEKLDD 173
Query: 645 S 647
+
Sbjct: 174 T 174
>AE014297-1719|AAN13576.1| 346|Drosophila melanogaster CG10851-PE,
isoform E protein.
Length = 346
Score = 56.4 bits (130), Expect = 3e-08
Identities = 31/61 (50%), Positives = 41/61 (67%), Gaps = 2/61 (3%)
Frame = +3
Query: 471 EYRVLVTGLPPSGSWQDLKDHMREAGDVCFADTFKD--GSGVVEFLRHEDMKYAVKKLDD 644
EYR++V L S +DLKD+MR+AG+V +AD K GVVEF DMK A++KLDD
Sbjct: 114 EYRLIVENL----SSRDLKDYMRQAGEVTYADAHKQRRNEGVVEFASLSDMKTAIEKLDD 169
Query: 645 S 647
+
Sbjct: 170 T 170
>AY118772-1|AAM50632.1| 430|Drosophila melanogaster GH11495p
protein.
Length = 430
Score = 46.4 bits (105), Expect = 3e-05
Identities = 20/56 (35%), Positives = 33/56 (58%)
Frame = +3
Query: 480 VLVTGLPPSGSWQDLKDHMREAGDVCFADTFKDGSGVVEFLRHEDMKYAVKKLDDS 647
+++ +P + +WQ L+D RE GDV FA+ + GVV F + D + A+ +D S
Sbjct: 363 IIIKNVPITCTWQTLRDKFREIGDVKFAEIRGNDVGVVRFFKERDAELAIALMDGS 418
>AE014297-952|AAF54387.1| 632|Drosophila melanogaster CG9373-PA
protein.
Length = 632
Score = 46.4 bits (105), Expect = 3e-05
Identities = 20/56 (35%), Positives = 33/56 (58%)
Frame = +3
Query: 480 VLVTGLPPSGSWQDLKDHMREAGDVCFADTFKDGSGVVEFLRHEDMKYAVKKLDDS 647
+++ +P + +WQ L+D RE GDV FA+ + GVV F + D + A+ +D S
Sbjct: 565 IIIKNVPITCTWQTLRDKFREIGDVKFAEIRGNDVGVVRFFKERDAELAIALMDGS 620
Score = 37.1 bits (82), Expect = 0.021
Identities = 13/30 (43%), Positives = 20/30 (66%)
Frame = +3
Query: 135 SSNRNECRIYVGNLPPDIRTKDIQDLFYNV 224
S R CR+Y+ N+P D R +D++DLF +
Sbjct: 51 SRERRNCRVYISNIPYDYRWQDLKDLFRRI 80
Score = 36.3 bits (80), Expect = 0.036
Identities = 21/62 (33%), Positives = 34/62 (54%), Gaps = 7/62 (11%)
Frame = +3
Query: 477 RVLVTGLPPSGSWQDLKDHMRE-AGDVCFADTFKD------GSGVVEFLRHEDMKYAVKK 635
RV ++ +P WQDLKD R G + + F D G G+VEF E+++ A++K
Sbjct: 58 RVYISNIPYDYRWQDLKDLFRRIVGSIEYVQLFFDESGKARGCGIVEFKDPENVQKALEK 117
Query: 636 LD 641
++
Sbjct: 118 MN 119
>BT004500-1|AAO42664.1| 216|Drosophila melanogaster GH08123p
protein.
Length = 216
Score = 42.3 bits (95), Expect = 6e-04
Identities = 21/40 (52%), Positives = 27/40 (67%), Gaps = 2/40 (5%)
Frame = +3
Query: 534 MREAGDVCFADTFKD--GSGVVEFLRHEDMKYAVKKLDDS 647
MR+AG+V +AD K GVVEF DMK A++KLDD+
Sbjct: 1 MRQAGEVTYADAHKQRRNEGVVEFASLSDMKTAIEKLDDT 40
>BT001750-1|AAN71505.1| 216|Drosophila melanogaster RH01580p
protein.
Length = 216
Score = 42.3 bits (95), Expect = 6e-04
Identities = 21/40 (52%), Positives = 27/40 (67%), Gaps = 2/40 (5%)
Frame = +3
Query: 534 MREAGDVCFADTFKD--GSGVVEFLRHEDMKYAVKKLDDS 647
MR+AG+V +AD K GVVEF DMK A++KLDD+
Sbjct: 1 MRQAGEVTYADAHKQRRNEGVVEFASLSDMKTAIEKLDDT 40
>BT001417-1|AAN71172.1| 216|Drosophila melanogaster GH12433p
protein.
Length = 216
Score = 42.3 bits (95), Expect = 6e-04
Identities = 21/40 (52%), Positives = 27/40 (67%), Gaps = 2/40 (5%)
Frame = +3
Query: 534 MREAGDVCFADTFKD--GSGVVEFLRHEDMKYAVKKLDDS 647
MR+AG+V +AD K GVVEF DMK A++KLDD+
Sbjct: 1 MRQAGEVTYADAHKQRRNEGVVEFASLSDMKTAIEKLDDT 40
>AY069302-1|AAL39447.1| 216|Drosophila melanogaster HL03687p
protein.
Length = 216
Score = 42.3 bits (95), Expect = 6e-04
Identities = 21/40 (52%), Positives = 27/40 (67%), Gaps = 2/40 (5%)
Frame = +3
Query: 534 MREAGDVCFADTFKD--GSGVVEFLRHEDMKYAVKKLDDS 647
MR+AG+V +AD K GVVEF DMK A++KLDD+
Sbjct: 1 MRQAGEVTYADAHKQRRNEGVVEFASLSDMKTAIEKLDDT 40
>AE014297-1724|AAX52949.1| 216|Drosophila melanogaster CG10851-PH,
isoform H protein.
Length = 216
Score = 42.3 bits (95), Expect = 6e-04
Identities = 21/40 (52%), Positives = 27/40 (67%), Gaps = 2/40 (5%)
Frame = +3
Query: 534 MREAGDVCFADTFKD--GSGVVEFLRHEDMKYAVKKLDDS 647
MR+AG+V +AD K GVVEF DMK A++KLDD+
Sbjct: 1 MRQAGEVTYADAHKQRRNEGVVEFASLSDMKTAIEKLDDT 40
>AE014297-1723|AAN13579.1| 216|Drosophila melanogaster CG10851-PG,
isoform G protein.
Length = 216
Score = 42.3 bits (95), Expect = 6e-04
Identities = 21/40 (52%), Positives = 27/40 (67%), Gaps = 2/40 (5%)
Frame = +3
Query: 534 MREAGDVCFADTFKD--GSGVVEFLRHEDMKYAVKKLDDS 647
MR+AG+V +AD K GVVEF DMK A++KLDD+
Sbjct: 1 MRQAGEVTYADAHKQRRNEGVVEFASLSDMKTAIEKLDDT 40
>AY061111-1|AAL28659.1| 494|Drosophila melanogaster LD09584p
protein.
Length = 494
Score = 34.3 bits (75), Expect = 0.15
Identities = 16/33 (48%), Positives = 21/33 (63%)
Frame = +3
Query: 495 LPPSGSWQDLKDHMREAGDVCFADTFKDGSGVV 593
LPP+G +Q + D +R AG VC AD + G G V
Sbjct: 238 LPPAGYFQAVYDAVRSAGGVCIADEVQVGFGRV 270
>AE014296-2311|AAF49794.2| 494|Drosophila melanogaster CG8745-PA
protein.
Length = 494
Score = 34.3 bits (75), Expect = 0.15
Identities = 16/33 (48%), Positives = 21/33 (63%)
Frame = +3
Query: 495 LPPSGSWQDLKDHMREAGDVCFADTFKDGSGVV 593
LPP+G +Q + D +R AG VC AD + G G V
Sbjct: 238 LPPAGYFQAVYDAVRSAGGVCIADEVQVGFGRV 270
>AF492764-2|AAM11674.1| 849|Drosophila melanogaster pol protein
protein.
Length = 849
Score = 32.3 bits (70), Expect = 0.59
Identities = 15/43 (34%), Positives = 23/43 (53%)
Frame = -2
Query: 140 ATASTRHYRLKNIISCLNVYLLLCWLHRLISPIRRFTVCKLKV 12
AT + RHY L + + LCWLH+L P + T K+++
Sbjct: 520 ATKTFRHYLLGRHCEIASDHQPLCWLHKLKEPNSKLTRWKIRL 562
>U73846-1|AAB61993.1| 808|Drosophila melanogaster testis-specific
RNP-type RNA bindingprotein protein.
Length = 808
Score = 31.5 bits (68), Expect = 1.0
Identities = 17/45 (37%), Positives = 24/45 (53%), Gaps = 1/45 (2%)
Frame = +3
Query: 84 NV*ATNNIL*PI-MSGGSSSNRNECRIYVGNLPPDIRTKDIQDLF 215
NV N + PI M S NRNE +++VG L + D++ LF
Sbjct: 418 NVKTLNGMYHPIQMKPADSENRNERKLFVGMLNKKLNENDVRKLF 462
>U58976-1|AAB58464.1| 604|Drosophila melanogaster bruno protein.
Length = 604
Score = 31.5 bits (68), Expect = 1.0
Identities = 17/45 (37%), Positives = 24/45 (53%), Gaps = 1/45 (2%)
Frame = +3
Query: 84 NV*ATNNIL*PI-MSGGSSSNRNECRIYVGNLPPDIRTKDIQDLF 215
NV N + PI M S NRNE +++VG L + D++ LF
Sbjct: 214 NVKTLNGMYHPIQMKPADSENRNERKLFVGMLNKKLNENDVRKLF 258
>AY051758-1|AAK93182.1| 604|Drosophila melanogaster LD29068p
protein.
Length = 604
Score = 31.5 bits (68), Expect = 1.0
Identities = 17/45 (37%), Positives = 24/45 (53%), Gaps = 1/45 (2%)
Frame = +3
Query: 84 NV*ATNNIL*PI-MSGGSSSNRNECRIYVGNLPPDIRTKDIQDLF 215
NV N + PI M S NRNE +++VG L + D++ LF
Sbjct: 214 NVKTLNGMYHPIQMKPADSENRNERKLFVGMLNKKLNENDVRKLF 258
>AF541948-2|AAN34651.1| 1006|Drosophila melanogaster pol protein
protein.
Length = 1006
Score = 31.5 bits (68), Expect = 1.0
Identities = 17/55 (30%), Positives = 28/55 (50%), Gaps = 2/55 (3%)
Frame = -2
Query: 170 SNIYTTLISV--ATASTRHYRLKNIISCLNVYLLLCWLHRLISPIRRFTVCKLKV 12
S I L+++ AT + RHY L + + LCWLH++ P + T K ++
Sbjct: 493 STIEKELLAIVWATKTFRHYLLGRHFEIASDHQPLCWLHKMKEPNAKLTRWKFRL 547
>AE014134-2183|AAN10812.1| 604|Drosophila melanogaster CG31762-PA,
isoform A protein.
Length = 604
Score = 31.5 bits (68), Expect = 1.0
Identities = 17/45 (37%), Positives = 24/45 (53%), Gaps = 1/45 (2%)
Frame = +3
Query: 84 NV*ATNNIL*PI-MSGGSSSNRNECRIYVGNLPPDIRTKDIQDLF 215
NV N + PI M S NRNE +++VG L + D++ LF
Sbjct: 214 NVKTLNGMYHPIQMKPADSENRNERKLFVGMLNKKLNENDVRKLF 258
>AE014134-2182|AAN10811.1| 616|Drosophila melanogaster CG31762-PC,
isoform C protein.
Length = 616
Score = 31.5 bits (68), Expect = 1.0
Identities = 17/45 (37%), Positives = 24/45 (53%), Gaps = 1/45 (2%)
Frame = +3
Query: 84 NV*ATNNIL*PI-MSGGSSSNRNECRIYVGNLPPDIRTKDIQDLF 215
NV N + PI M S NRNE +++VG L + D++ LF
Sbjct: 214 NVKTLNGMYHPIQMKPADSENRNERKLFVGMLNKKLNENDVRKLF 258
>AE014134-2181|AAN10810.1| 810|Drosophila melanogaster CG31762-PB,
isoform B protein.
Length = 810
Score = 31.5 bits (68), Expect = 1.0
Identities = 17/45 (37%), Positives = 24/45 (53%), Gaps = 1/45 (2%)
Frame = +3
Query: 84 NV*ATNNIL*PI-MSGGSSSNRNECRIYVGNLPPDIRTKDIQDLF 215
NV N + PI M S NRNE +++VG L + D++ LF
Sbjct: 420 NVKTLNGMYHPIQMKPADSENRNERKLFVGMLNKKLNENDVRKLF 464
>AY061826-1|AAL27637.1| 388|Drosophila melanogaster GH21984p
protein.
Length = 388
Score = 31.1 bits (67), Expect = 1.4
Identities = 17/63 (26%), Positives = 26/63 (41%)
Frame = -1
Query: 564 LQSIRRRPLAYGL*GPARNPRAVSR*RARGIQSVERADHVLPLVHPNGHHRLENHESLHL 385
++ +RRRP G P P +VS ++ H H + HH+ +H H
Sbjct: 48 IEELRRRPFGDGSYNPPAAPASVSASITTTTTQQQQQHHNPSHHHQSSHHQPSHHHHHHH 107
Query: 384 HLQ 376
H Q
Sbjct: 108 HSQ 110
>AY061516-1|AAL29064.1| 418|Drosophila melanogaster LD46870p
protein.
Length = 418
Score = 31.1 bits (67), Expect = 1.4
Identities = 12/26 (46%), Positives = 18/26 (69%)
Frame = +3
Query: 141 NRNECRIYVGNLPPDIRTKDIQDLFY 218
+RN +YVGNLP +I +++D FY
Sbjct: 228 DRNITTLYVGNLPEEITEPELRDQFY 253
>AE014297-14|AAF52166.2| 418|Drosophila melanogaster CG14641-PA
protein.
Length = 418
Score = 31.1 bits (67), Expect = 1.4
Identities = 12/26 (46%), Positives = 18/26 (69%)
Frame = +3
Query: 141 NRNECRIYVGNLPPDIRTKDIQDLFY 218
+RN +YVGNLP +I +++D FY
Sbjct: 228 DRNITTLYVGNLPEEITEPELRDQFY 253
>AE014296-3519|AAF51708.2| 388|Drosophila melanogaster CG7605-PA
protein.
Length = 388
Score = 31.1 bits (67), Expect = 1.4
Identities = 17/63 (26%), Positives = 26/63 (41%)
Frame = -1
Query: 564 LQSIRRRPLAYGL*GPARNPRAVSR*RARGIQSVERADHVLPLVHPNGHHRLENHESLHL 385
++ +RRRP G P P +VS ++ H H + HH+ +H H
Sbjct: 48 IEELRRRPFGDGSYNPPAAPASVSASITTTTTQQQQQHHNPSHHHQSSHHQPSHHHHHHH 107
Query: 384 HLQ 376
H Q
Sbjct: 108 HSQ 110
>AY052060-1|AAK93484.1| 495|Drosophila melanogaster LP09632p
protein.
Length = 495
Score = 30.7 bits (66), Expect = 1.8
Identities = 13/38 (34%), Positives = 23/38 (60%)
Frame = +3
Query: 153 CRIYVGNLPPDIRTKDIQDLFYNVRKSNVR*PKEQKRS 266
C +YVGN+P ++ T I+ F N + ++ K +KR+
Sbjct: 215 CSLYVGNIPFNMTTSAIKAYFANAMRVDIGVLKREKRA 252
>AJ295236-1|CAC16735.1| 495|Drosophila melanogaster painting of
fourth protein protein.
Length = 495
Score = 30.7 bits (66), Expect = 1.8
Identities = 13/38 (34%), Positives = 23/38 (60%)
Frame = +3
Query: 153 CRIYVGNLPPDIRTKDIQDLFYNVRKSNVR*PKEQKRS 266
C +YVGN+P ++ T I+ F N + ++ K +KR+
Sbjct: 215 CSLYVGNIPFNMTTSAIKAYFANAMRVDIGVLKREKRA 252
>AE013599-3935|AAM68326.1| 495|Drosophila melanogaster CG3691-PB,
isoform B protein.
Length = 495
Score = 30.7 bits (66), Expect = 1.8
Identities = 13/38 (34%), Positives = 23/38 (60%)
Frame = +3
Query: 153 CRIYVGNLPPDIRTKDIQDLFYNVRKSNVR*PKEQKRS 266
C +YVGN+P ++ T I+ F N + ++ K +KR+
Sbjct: 215 CSLYVGNIPFNMTTSAIKAYFANAMRVDIGVLKREKRA 252
>AE013599-3934|AAF47254.1| 495|Drosophila melanogaster CG3691-PA,
isoform A protein.
Length = 495
Score = 30.7 bits (66), Expect = 1.8
Identities = 13/38 (34%), Positives = 23/38 (60%)
Frame = +3
Query: 153 CRIYVGNLPPDIRTKDIQDLFYNVRKSNVR*PKEQKRS 266
C +YVGN+P ++ T I+ F N + ++ K +KR+
Sbjct: 215 CSLYVGNIPFNMTTSAIKAYFANAMRVDIGVLKREKRA 252
>BT025050-1|ABE73221.1| 624|Drosophila melanogaster IP16114p
protein.
Length = 624
Score = 29.5 bits (63), Expect = 4.2
Identities = 16/40 (40%), Positives = 23/40 (57%)
Frame = -1
Query: 507 PRAVSR*RARGIQSVERADHVLPLVHPNGHHRLENHESLH 388
PR +S+ + ++ RA VLPL+H NG H H+ LH
Sbjct: 261 PREISK--TLRVDALLRAPGVLPLIHENGIH--FKHQELH 296
>AE014297-1294|AAF54635.3| 2243|Drosophila melanogaster CG5270-PB,
isoform B protein.
Length = 2243
Score = 29.5 bits (63), Expect = 4.2
Identities = 16/40 (40%), Positives = 23/40 (57%)
Frame = -1
Query: 507 PRAVSR*RARGIQSVERADHVLPLVHPNGHHRLENHESLH 388
PR +S+ + ++ RA VLPL+H NG H H+ LH
Sbjct: 261 PREISK--TLRVDALLRAPGVLPLIHENGIH--FKHQELH 296
>AE014298-2122|AAF48438.1| 277|Drosophila melanogaster CG15032-PA
protein.
Length = 277
Score = 28.3 bits (60), Expect = 9.6
Identities = 14/47 (29%), Positives = 17/47 (36%)
Frame = -1
Query: 522 GPARNPRAVSR*RARGIQSVERADHVLPLVHPNGHHRLENHESLHLH 382
GP P A+ + H P HP+ HH H S H H
Sbjct: 214 GPGAGPGAMQAAYPGHSAHMHALHHQYPQPHPHAHHPQHPHHSPHPH 260
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,903,953
Number of Sequences: 53049
Number of extensions: 486896
Number of successful extensions: 1666
Number of sequences better than 10.0: 42
Number of HSP's better than 10.0 without gapping: 1535
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1643
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2786177250
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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