Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP02_F_N08
(629 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q9V3W7 Cluster: CG6987-PA; n=9; Eukaryota|Rep: CG6987-P... 102 6e-21
UniRef50_Q5ZML3 Cluster: Splicing factor, arginine/serine-rich 1... 100 3e-20
UniRef50_Q07955 Cluster: Splicing factor, arginine/serine-rich 1... 95 1e-18
UniRef50_UPI0000586F5E Cluster: PREDICTED: hypothetical protein;... 85 1e-15
UniRef50_Q13242 Cluster: Splicing factor, arginine/serine-rich 9... 81 2e-14
UniRef50_A3BNB8 Cluster: Putative uncharacterized protein; n=1; ... 75 1e-12
UniRef50_A2WP42 Cluster: Putative uncharacterized protein; n=2; ... 73 6e-12
UniRef50_UPI0000E23421 Cluster: PREDICTED: similar to SRp30c iso... 72 1e-11
UniRef50_O81290 Cluster: T14P8.21; n=1; Arabidopsis thaliana|Rep... 71 2e-11
UniRef50_Q6GYB0 Cluster: Splice factor; n=1; Toxoplasma gondii|R... 60 3e-08
UniRef50_A5K9I6 Cluster: Splicing factor, arginine/serine-rich 1... 58 1e-07
UniRef50_A2YPU5 Cluster: Putative uncharacterized protein; n=1; ... 53 3e-07
UniRef50_Q4YYJ2 Cluster: Splicing factor, putative; n=4; Plasmod... 56 5e-07
UniRef50_Q1JSF6 Cluster: Splicing factor, putative; n=1; Toxopla... 55 2e-06
UniRef50_A5KE64 Cluster: Pre-mRNA splicing factor, putative; n=4... 51 2e-05
UniRef50_Q4Q4J4 Cluster: RNA binding protein rggm, putative; n=8... 50 3e-05
UniRef50_Q4YXA9 Cluster: Pre-mRNA splicing factor, putative; n=1... 50 6e-05
UniRef50_Q08170 Cluster: Splicing factor, arginine/serine-rich 4... 49 8e-05
UniRef50_Q4UI58 Cluster: Splicing factor (SR protein), putative;... 49 1e-04
UniRef50_Q13247 Cluster: Splicing factor, arginine/serine-rich 6... 49 1e-04
UniRef50_A7SXE8 Cluster: Predicted protein; n=1; Nematostella ve... 46 0.001
UniRef50_Q5CIP3 Cluster: Single-stranded G-strand telomeric DNA-... 45 0.001
UniRef50_Q13243 Cluster: Splicing factor, arginine/serine-rich 5... 44 0.002
UniRef50_A7RSW7 Cluster: Predicted protein; n=1; Nematostella ve... 44 0.003
UniRef50_P78814 Cluster: Pre-mRNA-splicing factor srp2; n=1; Sch... 44 0.004
UniRef50_UPI000023EB21 Cluster: hypothetical protein FG09282.1; ... 43 0.005
UniRef50_Q7XZ56 Cluster: Gbp1; n=1; Griffithsia japonica|Rep: Gb... 43 0.005
UniRef50_A2R7K8 Cluster: Function: human SRp75 can complement a ... 43 0.007
UniRef50_Q0UIG5 Cluster: Putative uncharacterized protein; n=1; ... 41 0.028
UniRef50_Q6CA64 Cluster: Similar to sp|Q8VE97 Mus musculus Splic... 40 0.037
UniRef50_UPI000065E7A2 Cluster: Splicing factor, arginine/serine... 40 0.049
UniRef50_Q6A1B2 Cluster: Hrp59 protein; n=2; Endopterygota|Rep: ... 39 0.11
UniRef50_Q17N77 Cluster: Arginine/serine-rich splicing factor; n... 39 0.11
UniRef50_P38922 Cluster: Protein HRB1; n=6; Saccharomycetales|Re... 39 0.11
UniRef50_A7AR60 Cluster: Single stranded G-strand telomeric DNA-... 38 0.15
UniRef50_Q5CVN7 Cluster: Splicing factor SRP40 like 2x RRM domai... 38 0.20
UniRef50_Q380H3 Cluster: ENSANGP00000026392; n=2; Culicidae|Rep:... 38 0.20
UniRef50_UPI0000EB082D Cluster: UPI0000EB082D related cluster; n... 37 0.35
UniRef50_A3GGU4 Cluster: Predicted protein; n=5; Saccharomycetal... 37 0.35
UniRef50_Q9P2K5 Cluster: Myelin expression factor 2; n=53; Eutel... 37 0.35
UniRef50_Q32NK0 Cluster: MGC131089 protein; n=1; Xenopus laevis|... 37 0.46
UniRef50_A4RWZ2 Cluster: Predicted protein; n=1; Ostreococcus lu... 37 0.46
UniRef50_UPI0000D555DA Cluster: PREDICTED: similar to CG9373-PA;... 36 0.61
UniRef50_Q94KD0 Cluster: AT5g58470/mqj2_60; n=4; Arabidopsis tha... 36 0.61
UniRef50_Q9VHC7 Cluster: CG9373-PA; n=3; Sophophora|Rep: CG9373-... 36 0.61
UniRef50_A7AR55 Cluster: RNA recognition motif containing protei... 36 0.61
UniRef50_Q8IJZ3 Cluster: Putative uncharacterized protein; n=1; ... 36 0.80
UniRef50_Q1WLW7 Cluster: G strand binding-protein 1/telomere bin... 36 1.1
UniRef50_A5K789 Cluster: RNA binding protein, putative; n=7; Pla... 36 1.1
UniRef50_A5K765 Cluster: Putative uncharacterized protein; n=1; ... 36 1.1
UniRef50_Q5K911 Cluster: Telomere maintenance protein, putative;... 35 1.4
UniRef50_Q5K8E1 Cluster: Protein-nucleus import-related protein,... 35 1.4
UniRef50_UPI0000E45D62 Cluster: PREDICTED: hypothetical protein;... 35 1.9
UniRef50_Q6CS06 Cluster: Kluyveromyces lactis strain NRRL Y-1140... 34 2.4
UniRef50_Q01560 Cluster: Nucleolar protein 3; n=7; Fungi/Metazoa... 34 2.4
UniRef50_UPI00015B4403 Cluster: PREDICTED: similar to myelinprot... 34 3.2
UniRef50_UPI00015A47CB Cluster: Novel protein.; n=1; Danio rerio... 34 3.2
UniRef50_Q0JQG3 Cluster: Os01g0164400 protein; n=3; Oryza sativa... 34 3.2
UniRef50_Q6FS32 Cluster: Similar to sp|P38922 Saccharomyces cere... 34 3.2
UniRef50_Q6C5Y5 Cluster: Yarrowia lipolytica chromosome E of str... 34 3.2
UniRef50_UPI00005A145A Cluster: PREDICTED: similar to non-POU do... 33 4.3
UniRef50_Q7PRR6 Cluster: ENSANGP00000017366; n=2; Culicidae|Rep:... 33 4.3
UniRef50_UPI000023D546 Cluster: hypothetical protein FG01463.1; ... 33 5.7
UniRef50_Q75EU7 Cluster: AAL018Wp; n=2; Eremothecium gossypii|Re... 33 5.7
UniRef50_Q5KA73 Cluster: MRNA binding protein, putative; n=1; Fi... 33 5.7
UniRef50_A5E7H3 Cluster: Putative uncharacterized protein; n=1; ... 33 5.7
UniRef50_UPI00015B58CC Cluster: PREDICTED: similar to eukaryotic... 33 7.5
UniRef50_Q1ZXL1 Cluster: RNA-binding region-containing protein; ... 33 7.5
UniRef50_A4V6N1 Cluster: HnRNP A2/B1 protein; n=1; Dugesia japon... 33 7.5
UniRef50_A6R551 Cluster: Predicted protein; n=1; Ajellomyces cap... 33 7.5
UniRef50_Q7RD87 Cluster: Similar to splicing factor, arginine/se... 32 9.9
UniRef50_P52272 Cluster: Heterogeneous nuclear ribonucleoprotein... 32 9.9
>UniRef50_Q9V3W7 Cluster: CG6987-PA; n=9; Eukaryota|Rep: CG6987-PA -
Drosophila melanogaster (Fruit fly)
Length = 255
Score = 102 bits (245), Expect = 6e-21
Identities = 52/92 (56%), Positives = 55/92 (59%), Gaps = 2/92 (2%)
Frame = +2
Query: 359 GYDYDGYRLRVEFXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--XXXXEYRVLVTGLPPS 532
GYDYDGYRLRVEF +YRV+VTGLP S
Sbjct: 66 GYDYDGYRLRVEFPRGGGPGSYRGGNRNDRSRDGGGRMGGRGPPAKRSQYRVMVTGLPAS 125
Query: 533 GSWQDLKDHMREAGDVCFAXTFKDGSGVVEFL 628
GSWQDLKDHMREAGDVCFA T+KDGSGVVEFL
Sbjct: 126 GSWQDLKDHMREAGDVCFADTYKDGSGVVEFL 157
Score = 58.8 bits (136), Expect = 1e-07
Identities = 25/30 (83%), Positives = 27/30 (90%)
Frame = +3
Query: 168 NRNECRIYVGNLPPDIRTKDIQDLFYNVRK 257
+RNECRIYVGNLPPDIRTKDIQDLF+ K
Sbjct: 3 SRNECRIYVGNLPPDIRTKDIQDLFHKFGK 32
Score = 53.6 bits (123), Expect = 4e-06
Identities = 23/26 (88%), Positives = 24/26 (92%)
Frame = +1
Query: 241 FTTFGKVTFVDLKNRKGPPFAFVEFE 318
F FGKVTFVDLKNR+GPPFAFVEFE
Sbjct: 27 FHKFGKVTFVDLKNRRGPPFAFVEFE 52
>UniRef50_Q5ZML3 Cluster: Splicing factor, arginine/serine-rich 1;
n=5; Euteleostomi|Rep: Splicing factor,
arginine/serine-rich 1 - Gallus gallus (Chicken)
Length = 257
Score = 100 bits (239), Expect = 3e-20
Identities = 49/90 (54%), Positives = 55/90 (61%)
Frame = +2
Query: 359 GYDYDGYRLRVEFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEYRVLVTGLPPSGS 538
GYDYDGYRLRVEF EYRV+V+GLPPSGS
Sbjct: 76 GYDYDGYRLRVEFPRSGRGTGRGGGGGGGGGAPRGRYGPPSRRS--EYRVIVSGLPPSGS 133
Query: 539 WQDLKDHMREAGDVCFAXTFKDGSGVVEFL 628
WQDLKDHMREAGDVC+A F+DG+GVVEF+
Sbjct: 134 WQDLKDHMREAGDVCYADVFRDGTGVVEFV 163
Score = 54.0 bits (124), Expect = 3e-06
Identities = 21/24 (87%), Positives = 24/24 (100%)
Frame = +3
Query: 174 NECRIYVGNLPPDIRTKDIQDLFY 245
N+CRIYVGNLPPDIRTKDI+D+FY
Sbjct: 14 NDCRIYVGNLPPDIRTKDIEDVFY 37
Score = 38.7 bits (86), Expect = 0.11
Identities = 17/27 (62%), Positives = 21/27 (77%), Gaps = 1/27 (3%)
Frame = +1
Query: 241 FTTFGKVTFVDLKNRKG-PPFAFVEFE 318
F +G + +DLKNR+G PPFAFVEFE
Sbjct: 36 FYKYGAIRDIDLKNRRGGPPFAFVEFE 62
>UniRef50_Q07955 Cluster: Splicing factor, arginine/serine-rich 1;
n=43; Deuterostomia|Rep: Splicing factor,
arginine/serine-rich 1 - Homo sapiens (Human)
Length = 248
Score = 95.1 bits (226), Expect = 1e-18
Identities = 47/90 (52%), Positives = 54/90 (60%)
Frame = +2
Query: 359 GYDYDGYRLRVEFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEYRVLVTGLPPSGS 538
GYDYDGYRLRVEF E RV+V+GLPPSGS
Sbjct: 76 GYDYDGYRLRVEFPRSGRGTGRGGGGGGGGGAPRGRYGPPSRRS--ENRVVVSGLPPSGS 133
Query: 539 WQDLKDHMREAGDVCFAXTFKDGSGVVEFL 628
WQDLKDHMREAGDVC+A ++DG+GVVEF+
Sbjct: 134 WQDLKDHMREAGDVCYADVYRDGTGVVEFV 163
Score = 54.0 bits (124), Expect = 3e-06
Identities = 21/24 (87%), Positives = 24/24 (100%)
Frame = +3
Query: 174 NECRIYVGNLPPDIRTKDIQDLFY 245
N+CRIYVGNLPPDIRTKDI+D+FY
Sbjct: 14 NDCRIYVGNLPPDIRTKDIEDVFY 37
Score = 38.7 bits (86), Expect = 0.11
Identities = 17/27 (62%), Positives = 21/27 (77%), Gaps = 1/27 (3%)
Frame = +1
Query: 241 FTTFGKVTFVDLKNRKG-PPFAFVEFE 318
F +G + +DLKNR+G PPFAFVEFE
Sbjct: 36 FYKYGAIRDIDLKNRRGGPPFAFVEFE 62
>UniRef50_UPI0000586F5E Cluster: PREDICTED: hypothetical protein;
n=1; Strongylocentrotus purpuratus|Rep: PREDICTED:
hypothetical protein - Strongylocentrotus purpuratus
Length = 287
Score = 85.4 bits (202), Expect = 1e-15
Identities = 44/90 (48%), Positives = 53/90 (58%)
Frame = +2
Query: 359 GYDYDGYRLRVEFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEYRVLVTGLPPSGS 538
GY+YDGYR+RVEF YRV+V+GLP +GS
Sbjct: 77 GYNYDGYRIRVEFPRGTKGFKGSRPRGPPPRRSS-------------YRVIVSGLPSTGS 123
Query: 539 WQDLKDHMREAGDVCFAXTFKDGSGVVEFL 628
WQDLKDHMREAGDVC+A ++DG+GVVEFL
Sbjct: 124 WQDLKDHMREAGDVCYADVYRDGTGVVEFL 153
>UniRef50_Q13242 Cluster: Splicing factor, arginine/serine-rich 9;
n=65; Eukaryota|Rep: Splicing factor,
arginine/serine-rich 9 - Homo sapiens (Human)
Length = 221
Score = 81.0 bits (191), Expect = 2e-14
Identities = 34/44 (77%), Positives = 40/44 (90%)
Frame = +2
Query: 497 EYRVLVTGLPPSGSWQDLKDHMREAGDVCFAXTFKDGSGVVEFL 628
++RVLV+GLPPSGSWQDLKDHMREAGDVC+A KDG G+VE+L
Sbjct: 110 DFRVLVSGLPPSGSWQDLKDHMREAGDVCYADVQKDGVGMVEYL 153
Score = 41.5 bits (93), Expect = 0.016
Identities = 16/21 (76%), Positives = 19/21 (90%)
Frame = +3
Query: 183 RIYVGNLPPDIRTKDIQDLFY 245
RIYVGNLP D+R KD++DLFY
Sbjct: 15 RIYVGNLPTDVREKDLEDLFY 35
>UniRef50_A3BNB8 Cluster: Putative uncharacterized protein; n=1;
Oryza sativa (japonica cultivar-group)|Rep: Putative
uncharacterized protein - Oryza sativa subsp. japonica
(Rice)
Length = 303
Score = 74.9 bits (176), Expect = 1e-12
Identities = 37/87 (42%), Positives = 45/87 (51%)
Frame = +2
Query: 359 GYDYDGYRLRVEFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEYRVLVTGLPPSGS 538
GY++DG RLRVE EYRVLVTGLP S S
Sbjct: 159 GYNFDGNRLRVELAHGGRGNSSSFNNSGGGGRRGGVSRHT------EYRVLVTGLPSSAS 212
Query: 539 WQDLKDHMREAGDVCFAXTFKDGSGVV 619
WQDLKDHMR AGDVC++ +++G G +
Sbjct: 213 WQDLKDHMRNAGDVCYSEVYREGGGTI 239
Score = 37.1 bits (82), Expect = 0.35
Identities = 14/20 (70%), Positives = 18/20 (90%)
Frame = +3
Query: 186 IYVGNLPPDIRTKDIQDLFY 245
IYVGNLP DIR ++++DLFY
Sbjct: 79 IYVGNLPGDIREREVEDLFY 98
>UniRef50_A2WP42 Cluster: Putative uncharacterized protein; n=2;
Eukaryota|Rep: Putative uncharacterized protein - Oryza
sativa subsp. indica (Rice)
Length = 431
Score = 72.9 bits (171), Expect = 6e-12
Identities = 36/86 (41%), Positives = 43/86 (50%)
Frame = +2
Query: 362 YDYDGYRLRVEFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEYRVLVTGLPPSGSW 541
Y++DGYRLRVE EYRV+VTGLP S SW
Sbjct: 241 YNFDGYRLRVELAHGGRGQSYSYDRPRSYSSGRRGGVSRRS----EYRVMVTGLPSSASW 296
Query: 542 QDLKDHMREAGDVCFAXTFKDGSGVV 619
QDLKDHMR AGDVCF+ +++ V
Sbjct: 297 QDLKDHMRRAGDVCFSDVYREAGATV 322
Score = 39.9 bits (89), Expect = 0.049
Identities = 16/25 (64%), Positives = 20/25 (80%)
Frame = +3
Query: 171 RNECRIYVGNLPPDIRTKDIQDLFY 245
RN IYVGNLP DIR ++++DLFY
Sbjct: 177 RNSRTIYVGNLPGDIREREVEDLFY 201
>UniRef50_UPI0000E23421 Cluster: PREDICTED: similar to SRp30c
isoform 1; n=2; Eutheria|Rep: PREDICTED: similar to
SRp30c isoform 1 - Pan troglodytes
Length = 178
Score = 71.7 bits (168), Expect = 1e-11
Identities = 30/37 (81%), Positives = 33/37 (89%)
Frame = +2
Query: 518 GLPPSGSWQDLKDHMREAGDVCFAXTFKDGSGVVEFL 628
GLPPSGSWQDLKDHMREAGDVC+A KDG G+VE+L
Sbjct: 74 GLPPSGSWQDLKDHMREAGDVCYADVQKDGVGMVEYL 110
Score = 41.5 bits (93), Expect = 0.016
Identities = 16/21 (76%), Positives = 19/21 (90%)
Frame = +3
Query: 183 RIYVGNLPPDIRTKDIQDLFY 245
RIYVGNLP D+R KD++DLFY
Sbjct: 15 RIYVGNLPTDVREKDLEDLFY 35
>UniRef50_O81290 Cluster: T14P8.21; n=1; Arabidopsis thaliana|Rep:
T14P8.21 - Arabidopsis thaliana (Mouse-ear cress)
Length = 294
Score = 71.3 bits (167), Expect = 2e-11
Identities = 36/91 (39%), Positives = 44/91 (48%), Gaps = 6/91 (6%)
Frame = +2
Query: 359 GYDYDGYRLRVEFXXXXXXXXXXXXXXXXXXXXXXXXXXXXX------XXXXEYRVLVTG 520
GYD+DG+ LRVE EYRV+V+G
Sbjct: 67 GYDFDGHHLRVELAHGGRRSSHDARGSYSGRGRGGRGGGDGGGRERGPSRRSEYRVVVSG 126
Query: 521 LPPSGSWQDLKDHMREAGDVCFAXTFKDGSG 613
LP S SWQDLKDHMR+ G+VCF+ F+DG G
Sbjct: 127 LPSSASWQDLKDHMRKGGEVCFSQVFRDGRG 157
Score = 35.5 bits (78), Expect = 1.1
Identities = 14/25 (56%), Positives = 20/25 (80%)
Frame = +3
Query: 168 NRNECRIYVGNLPPDIRTKDIQDLF 242
+R+ IYVGNLP DIR ++++DLF
Sbjct: 3 SRSSRTIYVGNLPGDIREREVEDLF 27
>UniRef50_Q6GYB0 Cluster: Splice factor; n=1; Toxoplasma gondii|Rep:
Splice factor - Toxoplasma gondii
Length = 345
Score = 60.5 bits (140), Expect = 3e-08
Identities = 28/43 (65%), Positives = 33/43 (76%)
Frame = +2
Query: 497 EYRVLVTGLPPSGSWQDLKDHMREAGDVCFAXTFKDGSGVVEF 625
E+RV V GLPP+ SWQDLKDHMR AGDV +A + G GVVE+
Sbjct: 130 EFRVRVYGLPPTASWQDLKDHMRRAGDVGYA-NIEGGVGVVEY 171
>UniRef50_A5K9I6 Cluster: Splicing factor, arginine/serine-rich 1,
putative; n=6; Aconoidasida|Rep: Splicing factor,
arginine/serine-rich 1, putative - Plasmodium vivax
Length = 314
Score = 58.4 bits (135), Expect = 1e-07
Identities = 27/42 (64%), Positives = 31/42 (73%)
Frame = +2
Query: 500 YRVLVTGLPPSGSWQDLKDHMREAGDVCFAXTFKDGSGVVEF 625
Y V V+GLP SGSWQDLKDH+REAG+ A FK+G G V F
Sbjct: 110 YVVEVSGLPLSGSWQDLKDHLREAGECGHADVFKNGLGEVSF 151
>UniRef50_A2YPU5 Cluster: Putative uncharacterized protein; n=1;
Oryza sativa (indica cultivar-group)|Rep: Putative
uncharacterized protein - Oryza sativa subsp. indica
(Rice)
Length = 257
Score = 52.8 bits (121), Expect(2) = 3e-07
Identities = 23/26 (88%), Positives = 23/26 (88%)
Frame = +2
Query: 503 RVLVTGLPPSGSWQDLKDHMREAGDV 580
RVLVTGLP S SWQDLKDHMR AGDV
Sbjct: 172 RVLVTGLPSSASWQDLKDHMRNAGDV 197
Score = 37.1 bits (82), Expect = 0.35
Identities = 14/20 (70%), Positives = 18/20 (90%)
Frame = +3
Query: 186 IYVGNLPPDIRTKDIQDLFY 245
IYVGNLP DIR ++++DLFY
Sbjct: 75 IYVGNLPGDIREREVEDLFY 94
Score = 24.2 bits (50), Expect(2) = 3e-07
Identities = 9/12 (75%), Positives = 11/12 (91%)
Frame = +2
Query: 359 GYDYDGYRLRVE 394
GY++DG RLRVE
Sbjct: 155 GYNFDGNRLRVE 166
>UniRef50_Q4YYJ2 Cluster: Splicing factor, putative; n=4;
Plasmodium|Rep: Splicing factor, putative - Plasmodium
berghei
Length = 287
Score = 56.4 bits (130), Expect = 5e-07
Identities = 25/38 (65%), Positives = 30/38 (78%)
Frame = +2
Query: 500 YRVLVTGLPPSGSWQDLKDHMREAGDVCFAXTFKDGSG 613
Y V V+GLP SGSWQDLKDH+REAG+ A FK+G+G
Sbjct: 109 YVVEVSGLPLSGSWQDLKDHLREAGECGHADVFKNGTG 146
>UniRef50_Q1JSF6 Cluster: Splicing factor, putative; n=1; Toxoplasma
gondii|Rep: Splicing factor, putative - Toxoplasma
gondii
Length = 216
Score = 54.8 bits (126), Expect = 2e-06
Identities = 35/90 (38%), Positives = 37/90 (41%)
Frame = +2
Query: 356 HGYDYDGYRLRVEFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEYRVLVTGLPPSG 535
HGY Y G LRVEF +R LV+ LPP
Sbjct: 93 HGYLYRGRSLRVEFTAQPARRLGSNPNFIPMGGASGPPRRTG------FRALVSFLPPGC 146
Query: 536 SWQDLKDHMREAGDVCFAXTFKDGSGVVEF 625
WQ LKDHMR AG V FA G GVVEF
Sbjct: 147 RWQHLKDHMRRAGPVGFAEVLSHGRGVVEF 176
>UniRef50_A5KE64 Cluster: Pre-mRNA splicing factor, putative; n=4;
Plasmodium|Rep: Pre-mRNA splicing factor, putative -
Plasmodium vivax
Length = 544
Score = 51.2 bits (117), Expect = 2e-05
Identities = 32/90 (35%), Positives = 42/90 (46%)
Frame = +2
Query: 359 GYDYDGYRLRVEFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEYRVLVTGLPPSGS 538
GY YDG RLRVE+ E+R++++ LP S
Sbjct: 76 GYKYDGVRLRVEYSGENKSYGKYRKKEEGAGPPVRT----------EHRIIISNLPESCK 125
Query: 539 WQDLKDHMREAGDVCFAXTFKDGSGVVEFL 628
WQ LKD MR+ GDV +A + G GVVEF+
Sbjct: 126 WQHLKDVMRQCGDVGYA-NIERGRGVVEFI 154
>UniRef50_Q4Q4J4 Cluster: RNA binding protein rggm, putative; n=8;
Trypanosomatidae|Rep: RNA binding protein rggm, putative
- Leishmania major
Length = 351
Score = 50.4 bits (115), Expect = 3e-05
Identities = 21/41 (51%), Positives = 27/41 (65%)
Frame = +2
Query: 503 RVLVTGLPPSGSWQDLKDHMREAGDVCFAXTFKDGSGVVEF 625
RV V+GL +W LKDH+R+AGD+ F F G G+VEF
Sbjct: 233 RVQVSGLSDETTWHTLKDHLRQAGDITFCRLFSGGRGMVEF 273
>UniRef50_Q4YXA9 Cluster: Pre-mRNA splicing factor, putative; n=1;
Plasmodium berghei|Rep: Pre-mRNA splicing factor,
putative - Plasmodium berghei
Length = 457
Score = 49.6 bits (113), Expect = 6e-05
Identities = 32/94 (34%), Positives = 43/94 (45%)
Frame = +2
Query: 347 EPAHGYDYDGYRLRVEFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEYRVLVTGLP 526
E GY +DG RLRVEF E+R++V+ LP
Sbjct: 36 ERRDGYKFDGERLRVEFSGENKSFGKYRRKEDGIGPPLRT----------EHRIIVSNLP 85
Query: 527 PSGSWQDLKDHMREAGDVCFAXTFKDGSGVVEFL 628
+ WQ LKD MR+ GDV +A + G G+VEF+
Sbjct: 86 DNCKWQHLKDIMRQCGDVGYA-NIEHGKGIVEFV 118
>UniRef50_Q08170 Cluster: Splicing factor, arginine/serine-rich 4;
n=41; Coelomata|Rep: Splicing factor,
arginine/serine-rich 4 - Homo sapiens (Human)
Length = 494
Score = 49.2 bits (112), Expect = 8e-05
Identities = 23/46 (50%), Positives = 31/46 (67%), Gaps = 2/46 (4%)
Frame = +2
Query: 497 EYRVLVTGLPPSGSWQDLKDHMREAGDVCFAXTFK--DGSGVVEFL 628
EYR++V L SWQDLKD+MR+AG+V +A K GV+EF+
Sbjct: 103 EYRLIVENLSSRCSWQDLKDYMRQAGEVTYADAHKGRKNEGVIEFV 148
>UniRef50_Q4UI58 Cluster: Splicing factor (SR protein), putative;
n=2; Theileria|Rep: Splicing factor (SR protein),
putative - Theileria annulata
Length = 341
Score = 48.8 bits (111), Expect = 1e-04
Identities = 29/90 (32%), Positives = 40/90 (44%)
Frame = +2
Query: 359 GYDYDGYRLRVEFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEYRVLVTGLPPSGS 538
GY+YD YRLRVEF +YR++++ LP
Sbjct: 75 GYEYDRYRLRVEFAGEKKPRRYPSYDRPRDRDRSNRYPPPTRT---DYRLVISNLPHGCR 131
Query: 539 WQDLKDHMREAGDVCFAXTFKDGSGVVEFL 628
WQ LKDHMR+AG V + G G V+++
Sbjct: 132 WQHLKDHMRKAGPVGYV-NIVHGKGFVDYM 160
>UniRef50_Q13247 Cluster: Splicing factor, arginine/serine-rich 6;
n=94; Eumetazoa|Rep: Splicing factor,
arginine/serine-rich 6 - Homo sapiens (Human)
Length = 344
Score = 48.8 bits (111), Expect = 1e-04
Identities = 23/45 (51%), Positives = 30/45 (66%), Gaps = 2/45 (4%)
Frame = +2
Query: 497 EYRVLVTGLPPSGSWQDLKDHMREAGDVCFAXTFKD--GSGVVEF 625
EYR++V L SWQDLKD MR+AG+V +A K+ GV+EF
Sbjct: 109 EYRLIVENLSSRCSWQDLKDFMRQAGEVTYADAHKERTNEGVIEF 153
>UniRef50_A7SXE8 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 188
Score = 45.6 bits (103), Expect = 0.001
Identities = 21/45 (46%), Positives = 28/45 (62%), Gaps = 2/45 (4%)
Frame = +2
Query: 497 EYRVLVTGLPPSGSWQDLKDHMREAGDVCFAXTF--KDGSGVVEF 625
E+RV+V L W +LK+ M AG+VC+A T + G GVVEF
Sbjct: 101 EFRVIVENLSTRAKWLELKEFMNNAGEVCYADTHRRRPGEGVVEF 145
>UniRef50_Q5CIP3 Cluster: Single-stranded G-strand telomeric
DNA-binding protein; n=3; Cryptosporidium|Rep:
Single-stranded G-strand telomeric DNA-binding protein -
Cryptosporidium hominis
Length = 198
Score = 45.2 bits (102), Expect = 0.001
Identities = 24/47 (51%), Positives = 28/47 (59%), Gaps = 6/47 (12%)
Frame = +2
Query: 503 RVLVTGLPPSGSWQDLKDHMREAGDVCFAXTFKD------GSGVVEF 625
RV V LP W DLKDHMR+AG+V A F+D G GVVE+
Sbjct: 8 RVYVGNLPWKAKWHDLKDHMRQAGNVIRADVFEDEVGRSRGCGVVEY 54
>UniRef50_Q13243 Cluster: Splicing factor, arginine/serine-rich 5;
n=62; Eumetazoa|Rep: Splicing factor,
arginine/serine-rich 5 - Homo sapiens (Human)
Length = 272
Score = 44.4 bits (100), Expect = 0.002
Identities = 24/45 (53%), Positives = 28/45 (62%), Gaps = 2/45 (4%)
Frame = +2
Query: 497 EYRVLVTGLPPSGSWQDLKDHMREAGDVCFAXTF--KDGSGVVEF 625
E R++V L SWQDLKD MR+AG+V FA K GVVEF
Sbjct: 107 ENRLIVENLSSRVSWQDLKDFMRQAGEVTFADAHRPKLNEGVVEF 151
>UniRef50_A7RSW7 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 548
Score = 44.0 bits (99), Expect = 0.003
Identities = 24/50 (48%), Positives = 30/50 (60%), Gaps = 7/50 (14%)
Frame = +2
Query: 497 EYRVLVTGLPPSGSWQDLKDHMRE-AGDVCFAXTFKD------GSGVVEF 625
E +V V+ +P WQ+LKDHM + GDV FA F+D G GVVEF
Sbjct: 92 EKKVFVSNIPFESRWQNLKDHMNKVVGDVAFAEIFEDEKGRSKGCGVVEF 141
Score = 33.5 bits (73), Expect = 4.3
Identities = 17/37 (45%), Positives = 20/37 (54%)
Frame = +2
Query: 503 RVLVTGLPPSGSWQDLKDHMREAGDVCFAXTFKDGSG 613
+V V LP +WQDLKD R AG V A + SG
Sbjct: 471 QVFVRNLPWKYTWQDLKDKFRPAGKVMRADILTEPSG 507
>UniRef50_P78814 Cluster: Pre-mRNA-splicing factor srp2; n=1;
Schizosaccharomyces pombe|Rep: Pre-mRNA-splicing factor
srp2 - Schizosaccharomyces pombe (Fission yeast)
Length = 365
Score = 43.6 bits (98), Expect = 0.004
Identities = 21/44 (47%), Positives = 29/44 (65%), Gaps = 2/44 (4%)
Frame = +2
Query: 500 YRVLVTGLPPSGSWQDLKDHMREAGDVCFAXTFKD--GSGVVEF 625
+R++V L SWQDLKD MR+AG+ F ++ G+GVVEF
Sbjct: 98 FRLIVENLSEDVSWQDLKDVMRKAGEPTFTDAHRENPGAGVVEF 141
>UniRef50_UPI000023EB21 Cluster: hypothetical protein FG09282.1;
n=1; Gibberella zeae PH-1|Rep: hypothetical protein
FG09282.1 - Gibberella zeae PH-1
Length = 330
Score = 43.2 bits (97), Expect = 0.005
Identities = 22/45 (48%), Positives = 30/45 (66%), Gaps = 3/45 (6%)
Frame = +2
Query: 500 YRVLVTGLPPSGSWQDLKDHMREAG-DVCFAXTFKD--GSGVVEF 625
+R+ +TGLP SWQDLKD R++ DV ++ T +D G G VEF
Sbjct: 103 HRMQITGLPNDTSWQDLKDFARQSSLDVVYSETGRDSNGRGFVEF 147
>UniRef50_Q7XZ56 Cluster: Gbp1; n=1; Griffithsia japonica|Rep: Gbp1
- Griffithsia japonica (Red alga)
Length = 156
Score = 43.2 bits (97), Expect = 0.005
Identities = 21/37 (56%), Positives = 22/37 (59%)
Frame = +2
Query: 503 RVLVTGLPPSGSWQDLKDHMREAGDVCFAXTFKDGSG 613
RV V L WQ LKDHMREAGDV A F + SG
Sbjct: 26 RVYVGNLSWDTRWQGLKDHMREAGDVVHAEVFTEASG 62
>UniRef50_A2R7K8 Cluster: Function: human SRp75 can complement a
splicing-deficient extract; n=14; Pezizomycotina|Rep:
Function: human SRp75 can complement a
splicing-deficient extract - Aspergillus niger
Length = 367
Score = 42.7 bits (96), Expect = 0.007
Identities = 22/44 (50%), Positives = 33/44 (75%), Gaps = 2/44 (4%)
Frame = +2
Query: 500 YRVLVTGLPPSGSWQDLKDHMREAG-DVCFAXTFKD-GSGVVEF 625
+R++V+GLP + SWQDLKD R++G DV ++ T ++ G G VEF
Sbjct: 101 FRMMVSGLPET-SWQDLKDFARQSGLDVVYSETGRELGRGFVEF 143
>UniRef50_Q0UIG5 Cluster: Putative uncharacterized protein; n=1;
Phaeosphaeria nodorum|Rep: Putative uncharacterized
protein - Phaeosphaeria nodorum (Septoria nodorum)
Length = 344
Score = 40.7 bits (91), Expect = 0.028
Identities = 20/45 (44%), Positives = 29/45 (64%), Gaps = 3/45 (6%)
Frame = +2
Query: 500 YRVLVTGLPPSGSWQDLKDHMREAG-DVCFAXT--FKDGSGVVEF 625
YR+ + LP SWQDLKD R++G DV ++ +DG+G VE+
Sbjct: 104 YRMRIANLPVETSWQDLKDFARQSGLDVVYSEVGRERDGTGFVEY 148
>UniRef50_Q6CA64 Cluster: Similar to sp|Q8VE97 Mus musculus Splicing
factor; n=1; Yarrowia lipolytica|Rep: Similar to
sp|Q8VE97 Mus musculus Splicing factor - Yarrowia
lipolytica (Candida lipolytica)
Length = 314
Score = 40.3 bits (90), Expect = 0.037
Identities = 22/45 (48%), Positives = 27/45 (60%), Gaps = 3/45 (6%)
Frame = +2
Query: 500 YRVLVTGLPPSGSWQDLKDHMREAG-DVCFAXTFKD--GSGVVEF 625
+RV ++GL P SWQDLKD R A DV + +D G G VEF
Sbjct: 86 FRVNISGLAPGVSWQDLKDFGRTADVDVTYTNVSRDREGEGTVEF 130
>UniRef50_UPI000065E7A2 Cluster: Splicing factor,
arginine/serine-rich 9 (Pre-mRNA-splicing factor
SRp30C).; n=1; Takifugu rubripes|Rep: Splicing factor,
arginine/serine-rich 9 (Pre-mRNA-splicing factor
SRp30C). - Takifugu rubripes
Length = 183
Score = 39.9 bits (89), Expect = 0.049
Identities = 16/25 (64%), Positives = 20/25 (80%)
Frame = +3
Query: 183 RIYVGNLPPDIRTKDIQDLFYNVRK 257
RIYVGNLP D++ +DI+DLFY K
Sbjct: 5 RIYVGNLPMDVQERDIEDLFYKYGK 29
Score = 33.1 bits (72), Expect = 5.7
Identities = 14/34 (41%), Positives = 22/34 (64%), Gaps = 1/34 (2%)
Frame = +1
Query: 220 QRIFKTCFTTFGKVTFVDLKNRKGP-PFAFVEFE 318
+R + F +GK+ ++LKN +G PFAF+ FE
Sbjct: 17 ERDIEDLFYKYGKIREIELKNNRGTIPFAFIRFE 50
>UniRef50_Q6A1B2 Cluster: Hrp59 protein; n=2; Endopterygota|Rep:
Hrp59 protein - Chironomus tentans (Midge)
Length = 525
Score = 38.7 bits (86), Expect = 0.11
Identities = 18/40 (45%), Positives = 25/40 (62%)
Frame = +2
Query: 506 VLVTGLPPSGSWQDLKDHMREAGDVCFAXTFKDGSGVVEF 625
+LV LP S +WQ+L+D R+ G+V FA +GVV F
Sbjct: 458 ILVRNLPSSWTWQNLRDKFRDVGEVKFAEIRGLDTGVVRF 497
Score = 34.3 bits (75), Expect = 2.4
Identities = 17/38 (44%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
Frame = +2
Query: 503 RVLVTGLPPSGSWQDLKDHMR-EAGDVCFAXTFKDGSG 613
R+ V+ + WQDLKD R E G+V F F D SG
Sbjct: 25 RIYVSNIAYEVRWQDLKDLFRKEVGEVAFVELFNDESG 62
>UniRef50_Q17N77 Cluster: Arginine/serine-rich splicing factor; n=2;
Aedes aegypti|Rep: Arginine/serine-rich splicing factor
- Aedes aegypti (Yellowfever mosquito)
Length = 247
Score = 38.7 bits (86), Expect = 0.11
Identities = 19/44 (43%), Positives = 28/44 (63%), Gaps = 2/44 (4%)
Frame = +2
Query: 500 YRVLVTGLPPSGSWQDLKDHMREAGDVCFAXTFKD--GSGVVEF 625
+R++V L W++LK +MR+AG+V FA +D GVVEF
Sbjct: 92 HRLIVENLSSRIDWRELKAYMRKAGNVTFADAHRDRMNEGVVEF 135
>UniRef50_P38922 Cluster: Protein HRB1; n=6; Saccharomycetales|Rep:
Protein HRB1 - Saccharomyces cerevisiae (Baker's yeast)
Length = 454
Score = 38.7 bits (86), Expect = 0.11
Identities = 18/39 (46%), Positives = 23/39 (58%)
Frame = +2
Query: 500 YRVLVTGLPPSGSWQDLKDHMREAGDVCFAXTFKDGSGV 616
+ V+V LP S +WQ LKD +E G+V A DG GV
Sbjct: 261 HEVIVKNLPASVNWQALKDIFKECGNVAHADVELDGDGV 299
>UniRef50_A7AR60 Cluster: Single stranded G-strand telomeric
DNA-binding protein, putative; n=3; Piroplasmida|Rep:
Single stranded G-strand telomeric DNA-binding protein,
putative - Babesia bovis
Length = 196
Score = 38.3 bits (85), Expect = 0.15
Identities = 21/48 (43%), Positives = 27/48 (56%), Gaps = 6/48 (12%)
Frame = +2
Query: 503 RVLVTGLPPSGSWQDLKDHMREAGDVCFAXTFKD------GSGVVEFL 628
RV V L WQDLKDHM++ G+V A +D G G+VEF+
Sbjct: 8 RVYVGNLSWRVKWQDLKDHMKQVGEVIRADIIEDFDGKSKGCGIVEFV 55
>UniRef50_Q5CVN7 Cluster: Splicing factor SRP40 like 2x RRM domains;
n=2; Cryptosporidium|Rep: Splicing factor SRP40 like 2x
RRM domains - Cryptosporidium parvum Iowa II
Length = 416
Score = 37.9 bits (84), Expect = 0.20
Identities = 20/46 (43%), Positives = 29/46 (63%), Gaps = 3/46 (6%)
Frame = +2
Query: 500 YRVLVTGLPPSGSWQDLKDHMREAGDVCFAXTFK-DGS--GVVEFL 628
+RV V L + SW+DLKD+ R+ G+V ++ F G GVVE+L
Sbjct: 118 FRVCVFNLDDNASWRDLKDYGRQIGEVNYSAVFHYQGQKVGVVEYL 163
>UniRef50_Q380H3 Cluster: ENSANGP00000026392; n=2; Culicidae|Rep:
ENSANGP00000026392 - Anopheles gambiae str. PEST
Length = 563
Score = 37.9 bits (84), Expect = 0.20
Identities = 22/48 (45%), Positives = 26/48 (54%), Gaps = 7/48 (14%)
Frame = +2
Query: 503 RVLVTGLPPSGSWQDLKDHMR-EAGDVCFAXTFKD------GSGVVEF 625
R+ V+ +P WQDLKD R E GDV F F D G G+VEF
Sbjct: 24 RIYVSNVPYEYRWQDLKDLFRKEVGDVSFVELFHDENNKPRGCGIVEF 71
Score = 37.5 bits (83), Expect = 0.26
Identities = 15/40 (37%), Positives = 24/40 (60%)
Frame = +2
Query: 506 VLVTGLPPSGSWQDLKDHMREAGDVCFAXTFKDGSGVVEF 625
+++ +P S +WQ L+D R+ G+V FA +GVV F
Sbjct: 496 IIIRNMPSSWTWQTLRDKFRDVGEVKFAEIRGQDTGVVRF 535
>UniRef50_UPI0000EB082D Cluster: UPI0000EB082D related cluster; n=1;
Canis lupus familiaris|Rep: UPI0000EB082D UniRef100
entry - Canis familiaris
Length = 611
Score = 37.1 bits (82), Expect = 0.35
Identities = 21/48 (43%), Positives = 27/48 (56%), Gaps = 7/48 (14%)
Frame = +2
Query: 503 RVLVTGLPPSGSWQDLKDHMRE-AGDVCFAXTFKD------GSGVVEF 625
RV ++ +P WQ +KD MRE G+V + FKD G GVVEF
Sbjct: 38 RVFISNIPYDMKWQAIKDLMREKVGEVTYVELFKDAEGKSRGCGVVEF 85
>UniRef50_A3GGU4 Cluster: Predicted protein; n=5;
Saccharomycetales|Rep: Predicted protein - Pichia
stipitis (Yeast)
Length = 271
Score = 37.1 bits (82), Expect = 0.35
Identities = 14/24 (58%), Positives = 19/24 (79%)
Frame = +2
Query: 497 EYRVLVTGLPPSGSWQDLKDHMRE 568
+YRV +T LP + +WQDLKD +RE
Sbjct: 84 KYRVKITNLPDNAAWQDLKDFVRE 107
>UniRef50_Q9P2K5 Cluster: Myelin expression factor 2; n=53;
Euteleostomi|Rep: Myelin expression factor 2 - Homo
sapiens (Human)
Length = 600
Score = 37.1 bits (82), Expect = 0.35
Identities = 21/48 (43%), Positives = 27/48 (56%), Gaps = 7/48 (14%)
Frame = +2
Query: 503 RVLVTGLPPSGSWQDLKDHMRE-AGDVCFAXTFKD------GSGVVEF 625
RV ++ +P WQ +KD MRE G+V + FKD G GVVEF
Sbjct: 101 RVFISNIPYDMKWQAIKDLMREKVGEVTYVELFKDAEGKSRGCGVVEF 148
>UniRef50_Q32NK0 Cluster: MGC131089 protein; n=1; Xenopus
laevis|Rep: MGC131089 protein - Xenopus laevis (African
clawed frog)
Length = 673
Score = 36.7 bits (81), Expect = 0.46
Identities = 20/48 (41%), Positives = 28/48 (58%), Gaps = 7/48 (14%)
Frame = +2
Query: 503 RVLVTGLPPSGSWQDLKDHMRE-AGDVCFAXTFKD------GSGVVEF 625
RV ++ +P WQ +KD MR+ G+V + FKD G+GVVEF
Sbjct: 130 RVFISNIPYDMKWQAIKDLMRDKVGEVTYVELFKDAEGKSRGNGVVEF 177
>UniRef50_A4RWZ2 Cluster: Predicted protein; n=1; Ostreococcus
lucimarinus CCE9901|Rep: Predicted protein -
Ostreococcus lucimarinus CCE9901
Length = 129
Score = 36.7 bits (81), Expect = 0.46
Identities = 16/34 (47%), Positives = 20/34 (58%)
Frame = +2
Query: 497 EYRVLVTGLPPSGSWQDLKDHMREAGDVCFAXTF 598
E+ V V LP W+D+KD R AG V +A TF
Sbjct: 96 EHSVKVEDLPRGADWRDVKDAFRRAGRVTYASTF 129
>UniRef50_UPI0000D555DA Cluster: PREDICTED: similar to CG9373-PA;
n=1; Tribolium castaneum|Rep: PREDICTED: similar to
CG9373-PA - Tribolium castaneum
Length = 573
Score = 36.3 bits (80), Expect = 0.61
Identities = 22/48 (45%), Positives = 26/48 (54%), Gaps = 7/48 (14%)
Frame = +2
Query: 503 RVLVTGLPPSGSWQDLKDHMR-EAGDVCFAXTFKD------GSGVVEF 625
RV V+ +P WQDLKD R + GDV F F D G G+VEF
Sbjct: 49 RVYVSNIPYEYRWQDLKDLFRSQVGDVQFVELFVDDNDKSRGCGIVEF 96
Score = 32.7 bits (71), Expect = 7.5
Identities = 11/23 (47%), Positives = 18/23 (78%)
Frame = +3
Query: 174 NECRIYVGNLPPDIRTKDIQDLF 242
+ CR+YV N+P + R +D++DLF
Sbjct: 46 SNCRVYVSNIPYEYRWQDLKDLF 68
>UniRef50_Q94KD0 Cluster: AT5g58470/mqj2_60; n=4; Arabidopsis
thaliana|Rep: AT5g58470/mqj2_60 - Arabidopsis thaliana
(Mouse-ear cress)
Length = 422
Score = 36.3 bits (80), Expect = 0.61
Identities = 13/25 (52%), Positives = 19/25 (76%)
Frame = +3
Query: 168 NRNECRIYVGNLPPDIRTKDIQDLF 242
N + RIY+ NLPPD+ T +++DLF
Sbjct: 276 NCDNARIYISNLPPDVTTDELKDLF 300
>UniRef50_Q9VHC7 Cluster: CG9373-PA; n=3; Sophophora|Rep: CG9373-PA
- Drosophila melanogaster (Fruit fly)
Length = 632
Score = 36.3 bits (80), Expect = 0.61
Identities = 16/40 (40%), Positives = 24/40 (60%)
Frame = +2
Query: 506 VLVTGLPPSGSWQDLKDHMREAGDVCFAXTFKDGSGVVEF 625
+++ +P + +WQ L+D RE GDV FA + GVV F
Sbjct: 565 IIIKNVPITCTWQTLRDKFREIGDVKFAEIRGNDVGVVRF 604
Score = 35.9 bits (79), Expect = 0.80
Identities = 12/27 (44%), Positives = 19/27 (70%)
Frame = +3
Query: 171 RNECRIYVGNLPPDIRTKDIQDLFYNV 251
R CR+Y+ N+P D R +D++DLF +
Sbjct: 54 RRNCRVYISNIPYDYRWQDLKDLFRRI 80
>UniRef50_A7AR55 Cluster: RNA recognition motif containing protein;
n=1; Babesia bovis|Rep: RNA recognition motif containing
protein - Babesia bovis
Length = 382
Score = 36.3 bits (80), Expect = 0.61
Identities = 20/41 (48%), Positives = 25/41 (60%), Gaps = 3/41 (7%)
Frame = +2
Query: 512 VTGLPPSGSWQDLKDHMREAGDVCFAXT-FKDGS--GVVEF 625
V L S SWQDLKD R+AG+V +A +D G+VEF
Sbjct: 263 VLNLDNSASWQDLKDFARQAGEVVYASVIIRDQKRYGLVEF 303
>UniRef50_Q8IJZ3 Cluster: Putative uncharacterized protein; n=1;
Plasmodium falciparum 3D7|Rep: Putative uncharacterized
protein - Plasmodium falciparum (isolate 3D7)
Length = 880
Score = 35.9 bits (79), Expect = 0.80
Identities = 18/46 (39%), Positives = 25/46 (54%), Gaps = 5/46 (10%)
Frame = +2
Query: 503 RVLVTGLPPSGSWQDLKDHMREAGDVCFAXTF-----KDGSGVVEF 625
R++V + SWQDLKD RE G V +A K+ G++EF
Sbjct: 441 RIVVKNIDEKASWQDLKDFGREVGSVSYANIVDDYHSKEKFGIIEF 486
>UniRef50_Q1WLW7 Cluster: G strand binding-protein 1/telomere
binding-protein; n=2; Chlamydomonas|Rep: G strand
binding-protein 1/telomere binding-protein -
Chlamydomonas incerta
Length = 225
Score = 35.5 bits (78), Expect = 1.1
Identities = 16/37 (43%), Positives = 19/37 (51%)
Frame = +2
Query: 503 RVLVTGLPPSGSWQDLKDHMREAGDVCFAXTFKDGSG 613
R V L SWQDLKD RE G+V + +D G
Sbjct: 12 RCFVGNLAWKTSWQDLKDKFRECGNVVYTNVMRDDDG 48
>UniRef50_A5K789 Cluster: RNA binding protein, putative; n=7;
Plasmodium|Rep: RNA binding protein, putative -
Plasmodium vivax
Length = 250
Score = 35.5 bits (78), Expect = 1.1
Identities = 20/47 (42%), Positives = 26/47 (55%), Gaps = 6/47 (12%)
Frame = +2
Query: 503 RVLVTGLPPSGSWQDLKDHMREAGDVCFAXTFKD------GSGVVEF 625
RV V LP +W LK HM++AGDV F+D G G+VE+
Sbjct: 22 RVYVGNLPWKVTWPVLKTHMKKAGDVVRVDIFEDTQGRSKGCGIVEY 68
>UniRef50_A5K765 Cluster: Putative uncharacterized protein; n=1;
Plasmodium vivax|Rep: Putative uncharacterized protein -
Plasmodium vivax
Length = 778
Score = 35.5 bits (78), Expect = 1.1
Identities = 16/45 (35%), Positives = 26/45 (57%), Gaps = 4/45 (8%)
Frame = +2
Query: 503 RVLVTGLPPSGSWQDLKDHMREAGDVCFAXTFKDGS----GVVEF 625
R++V + SWQDLKD R+ G V +A +D + G++E+
Sbjct: 331 RIVVKNIDEKASWQDLKDFGRDVGSVNYANIIQDDNKERFGIIEY 375
>UniRef50_Q5K911 Cluster: Telomere maintenance protein, putative;
n=2; Filobasidiella neoformans|Rep: Telomere maintenance
protein, putative - Cryptococcus neoformans
(Filobasidiella neoformans)
Length = 951
Score = 35.1 bits (77), Expect = 1.4
Identities = 16/36 (44%), Positives = 20/36 (55%)
Frame = +2
Query: 506 VLVTGLPPSGSWQDLKDHMREAGDVCFAXTFKDGSG 613
+ V+ LP S WQDLKD +R AG + A D G
Sbjct: 516 IFVSNLPLSMQWQDLKDMLRPAGTIIRADVATDAHG 551
>UniRef50_Q5K8E1 Cluster: Protein-nucleus import-related protein,
putative; n=2; Filobasidiella neoformans|Rep:
Protein-nucleus import-related protein, putative -
Cryptococcus neoformans (Filobasidiella neoformans)
Length = 563
Score = 35.1 bits (77), Expect = 1.4
Identities = 15/25 (60%), Positives = 18/25 (72%)
Frame = +2
Query: 506 VLVTGLPPSGSWQDLKDHMREAGDV 580
+ V LP SWQDLKD MR+AG+V
Sbjct: 294 LFVGNLPLQASWQDLKDLMRQAGEV 318
>UniRef50_UPI0000E45D62 Cluster: PREDICTED: hypothetical protein;
n=2; Strongylocentrotus purpuratus|Rep: PREDICTED:
hypothetical protein - Strongylocentrotus purpuratus
Length = 734
Score = 34.7 bits (76), Expect = 1.9
Identities = 17/37 (45%), Positives = 21/37 (56%)
Frame = +2
Query: 503 RVLVTGLPPSGSWQDLKDHMREAGDVCFAXTFKDGSG 613
+V V LP S SWQ LKD ++ G+V FA D G
Sbjct: 658 QVFVRNLPFSYSWQKLKDVFKDVGNVTFASVKTDERG 694
>UniRef50_Q6CS06 Cluster: Kluyveromyces lactis strain NRRL Y-1140
chromosome D of strain NRRL Y- 1140 of Kluyveromyces
lactis; n=1; Kluyveromyces lactis|Rep: Kluyveromyces
lactis strain NRRL Y-1140 chromosome D of strain NRRL Y-
1140 of Kluyveromyces lactis - Kluyveromyces lactis
(Yeast) (Candida sphaerica)
Length = 262
Score = 34.3 bits (75), Expect = 2.4
Identities = 16/38 (42%), Positives = 20/38 (52%)
Frame = +2
Query: 500 YRVLVTGLPPSGSWQDLKDHMREAGDVCFAXTFKDGSG 613
+ V V LP S +WQ+LKD + GDV A D G
Sbjct: 62 FEVFVAQLPFSVNWQELKDMFKPCGDVLHADVVTDRDG 99
>UniRef50_Q01560 Cluster: Nucleolar protein 3; n=7; Fungi/Metazoa
group|Rep: Nucleolar protein 3 - Saccharomyces
cerevisiae (Baker's yeast)
Length = 414
Score = 34.3 bits (75), Expect = 2.4
Identities = 19/46 (41%), Positives = 25/46 (54%), Gaps = 4/46 (8%)
Frame = +2
Query: 500 YRVLVTGLPPSGSWQDLKDHMREAG-DVCFAXTFK---DGSGVVEF 625
YR+ + LP SWQDLKD RE + F+ DG+G +EF
Sbjct: 200 YRITMKNLPEGCSWQDLKDLARENSLETTFSSVNTRDFDGTGALEF 245
>UniRef50_UPI00015B4403 Cluster: PREDICTED: similar to myelinprotein
expression factor; n=1; Nasonia vitripennis|Rep:
PREDICTED: similar to myelinprotein expression factor -
Nasonia vitripennis
Length = 566
Score = 33.9 bits (74), Expect = 3.2
Identities = 14/40 (35%), Positives = 24/40 (60%)
Frame = +2
Query: 506 VLVTGLPPSGSWQDLKDHMREAGDVCFAXTFKDGSGVVEF 625
+++ LPP+ +WQ L+D ++ G+V FA G+V F
Sbjct: 499 IVIANLPPNTTWQMLRDKCQDIGEVKFAEMRGADVGMVRF 538
Score = 33.1 bits (72), Expect = 5.7
Identities = 20/48 (41%), Positives = 24/48 (50%), Gaps = 7/48 (14%)
Frame = +2
Query: 503 RVLVTGLPPSGSWQDLKDHMR-EAGDVCFAXTFKD------GSGVVEF 625
R+ V+ +P WQDLKD R E G V F D G G+VEF
Sbjct: 53 RIYVSNIPYDFRWQDLKDLFRTEVGKVAHVELFTDENDKPRGCGIVEF 100
>UniRef50_UPI00015A47CB Cluster: Novel protein.; n=1; Danio
rerio|Rep: Novel protein. - Danio rerio
Length = 596
Score = 33.9 bits (74), Expect = 3.2
Identities = 16/39 (41%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Frame = +2
Query: 500 YRVLVTGLPPSGSWQDLKDHMRE-AGDVCFAXTFKDGSG 613
Y V V+ +P WQ LKD M+E G+V + DG G
Sbjct: 29 YSVFVSNIPYDVKWQTLKDLMKEKVGEVTYVEHLMDGEG 67
>UniRef50_Q0JQG3 Cluster: Os01g0164400 protein; n=3; Oryza
sativa|Rep: Os01g0164400 protein - Oryza sativa subsp.
japonica (Rice)
Length = 283
Score = 33.9 bits (74), Expect = 3.2
Identities = 11/23 (47%), Positives = 18/23 (78%)
Frame = +3
Query: 174 NECRIYVGNLPPDIRTKDIQDLF 242
+ RIY+ NLPPD+ +++Q+LF
Sbjct: 144 DNARIYISNLPPDVTVEELQELF 166
>UniRef50_Q6FS32 Cluster: Similar to sp|P38922 Saccharomyces
cerevisiae YNL004w HRB1; n=1; Candida glabrata|Rep:
Similar to sp|P38922 Saccharomyces cerevisiae YNL004w
HRB1 - Candida glabrata (Yeast) (Torulopsis glabrata)
Length = 443
Score = 33.9 bits (74), Expect = 3.2
Identities = 16/39 (41%), Positives = 22/39 (56%)
Frame = +2
Query: 500 YRVLVTGLPPSGSWQDLKDHMREAGDVCFAXTFKDGSGV 616
Y +++ LP S SWQ LK +E GDV A D +G+
Sbjct: 217 YELMILNLPYSISWQTLKTMFKEFGDVLKANVEVDSTGM 255
>UniRef50_Q6C5Y5 Cluster: Yarrowia lipolytica chromosome E of strain
CLIB 122 of Yarrowia lipolytica; n=1; Yarrowia
lipolytica|Rep: Yarrowia lipolytica chromosome E of
strain CLIB 122 of Yarrowia lipolytica - Yarrowia
lipolytica (Candida lipolytica)
Length = 406
Score = 33.9 bits (74), Expect = 3.2
Identities = 22/47 (46%), Positives = 26/47 (55%), Gaps = 6/47 (12%)
Frame = +2
Query: 503 RVLVTGLPPSGSWQDLKDHMREAGDVCFA--XTFKD----GSGVVEF 625
++ V LP S WQDLKD REAG + A T D GSG+V F
Sbjct: 196 QLFVGNLPYSTGWQDLKDLFREAGQIVRADIMTSHDGRSKGSGIVLF 242
Score = 32.3 bits (70), Expect = 9.9
Identities = 19/47 (40%), Positives = 23/47 (48%), Gaps = 6/47 (12%)
Frame = +2
Query: 503 RVLVTGLPPSGSWQDLKDHMREAGDVCFAXTF------KDGSGVVEF 625
RV V L W LKD MR+AG+V FA G G+VE+
Sbjct: 79 RVYVGNLAYEVKWHHLKDFMRQAGNVLFADVLLMPNGRSKGCGIVEY 125
>UniRef50_UPI00005A145A Cluster: PREDICTED: similar to non-POU
domain containing, octamer-binding; n=1; Canis lupus
familiaris|Rep: PREDICTED: similar to non-POU domain
containing, octamer-binding - Canis familiaris
Length = 364
Score = 33.5 bits (73), Expect = 4.3
Identities = 13/26 (50%), Positives = 20/26 (76%)
Frame = +3
Query: 183 RIYVGNLPPDIRTKDIQDLFYNVRKS 260
R++VGNLPPDI ++++ LF RK+
Sbjct: 74 RLFVGNLPPDITGEEMRKLFEKYRKA 99
>UniRef50_Q7PRR6 Cluster: ENSANGP00000017366; n=2; Culicidae|Rep:
ENSANGP00000017366 - Anopheles gambiae str. PEST
Length = 292
Score = 33.5 bits (73), Expect = 4.3
Identities = 16/42 (38%), Positives = 25/42 (59%)
Frame = +3
Query: 186 IYVGNLPPDIRTKDIQDLFYNVRKSNVR*PKEQKRSAIRVRG 311
+YV NLP DI D+ D+F NV ++ P++ + R+RG
Sbjct: 89 VYVSNLPYDINENDLYDIFENVEIVSMTLPRDDSET-WRLRG 129
>UniRef50_UPI000023D546 Cluster: hypothetical protein FG01463.1;
n=1; Gibberella zeae PH-1|Rep: hypothetical protein
FG01463.1 - Gibberella zeae PH-1
Length = 641
Score = 33.1 bits (72), Expect = 5.7
Identities = 14/32 (43%), Positives = 22/32 (68%)
Frame = +1
Query: 220 QRIFKTCFTTFGKVTFVDLKNRKGPPFAFVEF 315
+ + K +TFG +TFV++ RKG FA+V+F
Sbjct: 520 EALLKQTLSTFGTITFVEIDKRKG--FAYVDF 549
>UniRef50_Q75EU7 Cluster: AAL018Wp; n=2; Eremothecium gossypii|Rep:
AAL018Wp - Ashbya gossypii (Yeast) (Eremothecium
gossypii)
Length = 337
Score = 33.1 bits (72), Expect = 5.7
Identities = 15/38 (39%), Positives = 19/38 (50%)
Frame = +2
Query: 500 YRVLVTGLPPSGSWQDLKDHMREAGDVCFAXTFKDGSG 613
+ + V LP S SWQ LKD +E +V A D G
Sbjct: 107 FEIFVANLPYSISWQTLKDMFKECSEVIHADVSVDADG 144
>UniRef50_Q5KA73 Cluster: MRNA binding protein, putative; n=1;
Filobasidiella neoformans|Rep: MRNA binding protein,
putative - Cryptococcus neoformans (Filobasidiella
neoformans)
Length = 274
Score = 33.1 bits (72), Expect = 5.7
Identities = 18/44 (40%), Positives = 26/44 (59%), Gaps = 3/44 (6%)
Frame = +2
Query: 503 RVLVTGLPPSGSWQDLKDHMREAGD-VCFAXTFK--DGSGVVEF 625
R+ V+G SWQDLKD+ R G+ + +A K G GV+E+
Sbjct: 92 RINVSGFSSETSWQDLKDYGRLGGNTIIYADVDKRNPGHGVIEY 135
>UniRef50_A5E7H3 Cluster: Putative uncharacterized protein; n=1;
Lodderomyces elongisporus NRRL YB-4239|Rep: Putative
uncharacterized protein - Lodderomyces elongisporus
(Yeast) (Saccharomyces elongisporus)
Length = 437
Score = 33.1 bits (72), Expect = 5.7
Identities = 19/36 (52%), Positives = 20/36 (55%)
Frame = +2
Query: 506 VLVTGLPPSGSWQDLKDHMREAGDVCFAXTFKDGSG 613
V V LP S +WQ LKD MREAG V A D G
Sbjct: 179 VFVGNLPFSVNWQALKDLMREAGQVIRADVRLDDWG 214
>UniRef50_UPI00015B58CC Cluster: PREDICTED: similar to eukaryotic
initiation factor 4B protein; n=1; Nasonia
vitripennis|Rep: PREDICTED: similar to eukaryotic
initiation factor 4B protein - Nasonia vitripennis
Length = 555
Score = 32.7 bits (71), Expect = 7.5
Identities = 12/31 (38%), Positives = 22/31 (70%)
Frame = +3
Query: 189 YVGNLPPDIRTKDIQDLFYNVRKSNVR*PKE 281
Y+ NLP D+ +D+ + F +++ S++R PKE
Sbjct: 85 YISNLPYDVEEEDLIEFFQDMKVSSMRLPKE 115
>UniRef50_Q1ZXL1 Cluster: RNA-binding region-containing protein;
n=1; Dictyostelium discoideum AX4|Rep: RNA-binding
region-containing protein - Dictyostelium discoideum AX4
Length = 737
Score = 32.7 bits (71), Expect = 7.5
Identities = 15/25 (60%), Positives = 18/25 (72%)
Frame = +3
Query: 186 IYVGNLPPDIRTKDIQDLFYNVRKS 260
I+VGNLP D KDI++LF N KS
Sbjct: 142 IFVGNLPRDTIVKDIENLFKNYVKS 166
>UniRef50_A4V6N1 Cluster: HnRNP A2/B1 protein; n=1; Dugesia
japonica|Rep: HnRNP A2/B1 protein - Dugesia japonica
(Planarian)
Length = 386
Score = 32.7 bits (71), Expect = 7.5
Identities = 12/37 (32%), Positives = 21/37 (56%)
Frame = +2
Query: 503 RVLVTGLPPSGSWQDLKDHMREAGDVCFAXTFKDGSG 613
++ V GLPP + D++ + + GDVC +D +G
Sbjct: 19 KIFVGGLPPQTTESDMRQYFSKYGDVCDVVAMRDKTG 55
>UniRef50_A6R551 Cluster: Predicted protein; n=1; Ajellomyces
capsulatus NAm1|Rep: Predicted protein - Ajellomyces
capsulatus NAm1
Length = 327
Score = 32.7 bits (71), Expect = 7.5
Identities = 12/24 (50%), Positives = 17/24 (70%)
Frame = +2
Query: 497 EYRVLVTGLPPSGSWQDLKDHMRE 568
EY V + G+PP WQ+LKD +R+
Sbjct: 18 EYVVFIQGIPPQCRWQELKDLVRQ 41
>UniRef50_Q7RD87 Cluster: Similar to splicing factor,
arginine/serine-rich 4, putative; n=3; Plasmodium
(Vinckeia)|Rep: Similar to splicing factor,
arginine/serine-rich 4, putative - Plasmodium yoelii
yoelii
Length = 715
Score = 32.3 bits (70), Expect = 9.9
Identities = 15/37 (40%), Positives = 21/37 (56%)
Frame = +2
Query: 503 RVLVTGLPPSGSWQDLKDHMREAGDVCFAXTFKDGSG 613
R++V + SWQDLKD RE G V +A + +G
Sbjct: 379 RIVVKNIDEKVSWQDLKDFGREVGLVNYANVVYNNNG 415
>UniRef50_P52272 Cluster: Heterogeneous nuclear ribonucleoprotein M;
n=69; Amniota|Rep: Heterogeneous nuclear
ribonucleoprotein M - Homo sapiens (Human)
Length = 730
Score = 32.3 bits (70), Expect = 9.9
Identities = 14/39 (35%), Positives = 20/39 (51%), Gaps = 1/39 (2%)
Frame = +2
Query: 500 YRVLVTGLPPSGSWQDLKDHMRE-AGDVCFAXTFKDGSG 613
YR +T +P WQ LKD ++E G+V + D G
Sbjct: 71 YRAFITNIPFDVKWQSLKDLVKEKVGEVTYVELLMDAEG 109
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 532,360,090
Number of Sequences: 1657284
Number of extensions: 8367566
Number of successful extensions: 19959
Number of sequences better than 10.0: 72
Number of HSP's better than 10.0 without gapping: 19333
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19952
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 46466611856
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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