Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP02_F_N08
(629 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY051919-1|AAK93343.1| 255|Drosophila melanogaster LD40489p pro... 101 6e-22
AF234157-1|AAF60294.1| 255|Drosophila melanogaster SR family sp... 101 6e-22
AF232773-1|AAF43413.1| 255|Drosophila melanogaster SR family sp... 101 6e-22
AE014297-2188|AAF55300.1| 255|Drosophila melanogaster CG6987-PA... 101 6e-22
X62599-1|CAA44483.1| 376|Drosophila melanogaster 52-kD bracketi... 50 3e-06
X58720-1|CAA41556.1| 350|Drosophila melanogaster SRp55 protein. 50 3e-06
BT003286-1|AAO25044.1| 350|Drosophila melanogaster GM10155p pro... 50 3e-06
BT001495-1|AAN71250.1| 350|Drosophila melanogaster LD30815p pro... 50 3e-06
AY113327-1|AAM29332.1| 350|Drosophila melanogaster AT29232p pro... 50 3e-06
AE014297-1720|AAF54968.1| 329|Drosophila melanogaster CG10851-P... 50 3e-06
AE014297-1718|AAN13575.1| 350|Drosophila melanogaster CG10851-P... 50 3e-06
AE014297-1717|AAF54969.2| 350|Drosophila melanogaster CG10851-P... 50 3e-06
AE014297-1719|AAN13576.1| 346|Drosophila melanogaster CG10851-P... 38 0.011
AY118772-1|AAM50632.1| 430|Drosophila melanogaster GH11495p pro... 36 0.034
AE014297-952|AAF54387.1| 632|Drosophila melanogaster CG9373-PA ... 36 0.034
AY061111-1|AAL28659.1| 494|Drosophila melanogaster LD09584p pro... 31 0.97
AE014296-2311|AAF49794.2| 494|Drosophila melanogaster CG8745-PA... 31 0.97
AY061516-1|AAL29064.1| 418|Drosophila melanogaster LD46870p pro... 31 1.3
AE014297-14|AAF52166.2| 418|Drosophila melanogaster CG14641-PA ... 31 1.3
AY052060-1|AAK93484.1| 495|Drosophila melanogaster LP09632p pro... 31 1.7
AJ295236-1|CAC16735.1| 495|Drosophila melanogaster painting of ... 31 1.7
AE013599-3935|AAM68326.1| 495|Drosophila melanogaster CG3691-PB... 31 1.7
AE013599-3934|AAF47254.1| 495|Drosophila melanogaster CG3691-PA... 31 1.7
>AY051919-1|AAK93343.1| 255|Drosophila melanogaster LD40489p
protein.
Length = 255
Score = 101 bits (243), Expect = 6e-22
Identities = 52/92 (56%), Positives = 55/92 (59%), Gaps = 2/92 (2%)
Frame = +2
Query: 359 GYDYDGYRLRVEFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--EYRVLVTGLPPS 532
GYDYDGYRLRVEF +YRV+VTGLP S
Sbjct: 66 GYDYDGYRLRVEFPRGGGPGSYRGGNRNDRSRDGGGRMGGRGPPAKRSQYRVMVTGLPAS 125
Query: 533 GSWQDLKDHMREAGDVCFAXTFKDGSGVVEFL 628
GSWQDLKDHMREAGDVCFA T+KDGSGVVEFL
Sbjct: 126 GSWQDLKDHMREAGDVCFADTYKDGSGVVEFL 157
Score = 58.8 bits (136), Expect = 6e-09
Identities = 25/30 (83%), Positives = 27/30 (90%)
Frame = +3
Query: 168 NRNECRIYVGNLPPDIRTKDIQDLFYNVRK 257
+RNECRIYVGNLPPDIRTKDIQDLF+ K
Sbjct: 3 SRNECRIYVGNLPPDIRTKDIQDLFHKFGK 32
Score = 53.6 bits (123), Expect = 2e-07
Identities = 23/26 (88%), Positives = 24/26 (92%)
Frame = +1
Query: 241 FTTFGKVTFVDLKNRKGPPFAFVEFE 318
F FGKVTFVDLKNR+GPPFAFVEFE
Sbjct: 27 FHKFGKVTFVDLKNRRGPPFAFVEFE 52
>AF234157-1|AAF60294.1| 255|Drosophila melanogaster SR family
splicing factor protein.
Length = 255
Score = 101 bits (243), Expect = 6e-22
Identities = 52/92 (56%), Positives = 55/92 (59%), Gaps = 2/92 (2%)
Frame = +2
Query: 359 GYDYDGYRLRVEFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--EYRVLVTGLPPS 532
GYDYDGYRLRVEF +YRV+VTGLP S
Sbjct: 66 GYDYDGYRLRVEFPRGGGPGSYRGGNRNDRSRDGGGRMGGRGPPAKRSQYRVMVTGLPAS 125
Query: 533 GSWQDLKDHMREAGDVCFAXTFKDGSGVVEFL 628
GSWQDLKDHMREAGDVCFA T+KDGSGVVEFL
Sbjct: 126 GSWQDLKDHMREAGDVCFADTYKDGSGVVEFL 157
Score = 58.8 bits (136), Expect = 6e-09
Identities = 25/30 (83%), Positives = 27/30 (90%)
Frame = +3
Query: 168 NRNECRIYVGNLPPDIRTKDIQDLFYNVRK 257
+RNECRIYVGNLPPDIRTKDIQDLF+ K
Sbjct: 3 SRNECRIYVGNLPPDIRTKDIQDLFHKFGK 32
Score = 53.6 bits (123), Expect = 2e-07
Identities = 23/26 (88%), Positives = 24/26 (92%)
Frame = +1
Query: 241 FTTFGKVTFVDLKNRKGPPFAFVEFE 318
F FGKVTFVDLKNR+GPPFAFVEFE
Sbjct: 27 FHKFGKVTFVDLKNRRGPPFAFVEFE 52
>AF232773-1|AAF43413.1| 255|Drosophila melanogaster SR family
splicing factor SF2 protein.
Length = 255
Score = 101 bits (243), Expect = 6e-22
Identities = 52/92 (56%), Positives = 55/92 (59%), Gaps = 2/92 (2%)
Frame = +2
Query: 359 GYDYDGYRLRVEFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--EYRVLVTGLPPS 532
GYDYDGYRLRVEF +YRV+VTGLP S
Sbjct: 66 GYDYDGYRLRVEFPRGGGPGSYRGGNRNDRSRDGGGRMGGRGPPAKRSQYRVMVTGLPAS 125
Query: 533 GSWQDLKDHMREAGDVCFAXTFKDGSGVVEFL 628
GSWQDLKDHMREAGDVCFA T+KDGSGVVEFL
Sbjct: 126 GSWQDLKDHMREAGDVCFADTYKDGSGVVEFL 157
Score = 58.8 bits (136), Expect = 6e-09
Identities = 25/30 (83%), Positives = 27/30 (90%)
Frame = +3
Query: 168 NRNECRIYVGNLPPDIRTKDIQDLFYNVRK 257
+RNECRIYVGNLPPDIRTKDIQDLF+ K
Sbjct: 3 SRNECRIYVGNLPPDIRTKDIQDLFHKFGK 32
Score = 53.6 bits (123), Expect = 2e-07
Identities = 23/26 (88%), Positives = 24/26 (92%)
Frame = +1
Query: 241 FTTFGKVTFVDLKNRKGPPFAFVEFE 318
F FGKVTFVDLKNR+GPPFAFVEFE
Sbjct: 27 FHKFGKVTFVDLKNRRGPPFAFVEFE 52
>AE014297-2188|AAF55300.1| 255|Drosophila melanogaster CG6987-PA
protein.
Length = 255
Score = 101 bits (243), Expect = 6e-22
Identities = 52/92 (56%), Positives = 55/92 (59%), Gaps = 2/92 (2%)
Frame = +2
Query: 359 GYDYDGYRLRVEFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--EYRVLVTGLPPS 532
GYDYDGYRLRVEF +YRV+VTGLP S
Sbjct: 66 GYDYDGYRLRVEFPRGGGPGSYRGGNRNDRSRDGGGRMGGRGPPAKRSQYRVMVTGLPAS 125
Query: 533 GSWQDLKDHMREAGDVCFAXTFKDGSGVVEFL 628
GSWQDLKDHMREAGDVCFA T+KDGSGVVEFL
Sbjct: 126 GSWQDLKDHMREAGDVCFADTYKDGSGVVEFL 157
Score = 58.8 bits (136), Expect = 6e-09
Identities = 25/30 (83%), Positives = 27/30 (90%)
Frame = +3
Query: 168 NRNECRIYVGNLPPDIRTKDIQDLFYNVRK 257
+RNECRIYVGNLPPDIRTKDIQDLF+ K
Sbjct: 3 SRNECRIYVGNLPPDIRTKDIQDLFHKFGK 32
Score = 53.6 bits (123), Expect = 2e-07
Identities = 23/26 (88%), Positives = 24/26 (92%)
Frame = +1
Query: 241 FTTFGKVTFVDLKNRKGPPFAFVEFE 318
F FGKVTFVDLKNR+GPPFAFVEFE
Sbjct: 27 FHKFGKVTFVDLKNRRGPPFAFVEFE 52
>X62599-1|CAA44483.1| 376|Drosophila melanogaster 52-kD bracketing
protein protein.
Length = 376
Score = 49.6 bits (113), Expect = 3e-06
Identities = 24/45 (53%), Positives = 30/45 (66%), Gaps = 2/45 (4%)
Frame = +2
Query: 497 EYRVLVTGLPPSGSWQDLKDHMREAGDVCFAXTFKD--GSGVVEF 625
EYR++V L SWQDLKD+MR+AG+V +A K GVVEF
Sbjct: 119 EYRLIVENLSSRVSWQDLKDYMRQAGEVTYADAHKQRRNEGVVEF 163
>X58720-1|CAA41556.1| 350|Drosophila melanogaster SRp55 protein.
Length = 350
Score = 49.6 bits (113), Expect = 3e-06
Identities = 24/45 (53%), Positives = 30/45 (66%), Gaps = 2/45 (4%)
Frame = +2
Query: 497 EYRVLVTGLPPSGSWQDLKDHMREAGDVCFAXTFKD--GSGVVEF 625
EYR++V L SWQDLKD+MR+AG+V +A K GVVEF
Sbjct: 114 EYRLIVENLSSRVSWQDLKDYMRQAGEVTYADAHKQRRNEGVVEF 158
>BT003286-1|AAO25044.1| 350|Drosophila melanogaster GM10155p
protein.
Length = 350
Score = 49.6 bits (113), Expect = 3e-06
Identities = 24/45 (53%), Positives = 30/45 (66%), Gaps = 2/45 (4%)
Frame = +2
Query: 497 EYRVLVTGLPPSGSWQDLKDHMREAGDVCFAXTFKD--GSGVVEF 625
EYR++V L SWQDLKD+MR+AG+V +A K GVVEF
Sbjct: 114 EYRLIVENLSSRVSWQDLKDYMRQAGEVTYADAHKQRRNEGVVEF 158
>BT001495-1|AAN71250.1| 350|Drosophila melanogaster LD30815p
protein.
Length = 350
Score = 49.6 bits (113), Expect = 3e-06
Identities = 24/45 (53%), Positives = 30/45 (66%), Gaps = 2/45 (4%)
Frame = +2
Query: 497 EYRVLVTGLPPSGSWQDLKDHMREAGDVCFAXTFKD--GSGVVEF 625
EYR++V L SWQDLKD+MR+AG+V +A K GVVEF
Sbjct: 114 EYRLIVENLSSRVSWQDLKDYMRQAGEVTYADAHKQRRNEGVVEF 158
>AY113327-1|AAM29332.1| 350|Drosophila melanogaster AT29232p
protein.
Length = 350
Score = 49.6 bits (113), Expect = 3e-06
Identities = 24/45 (53%), Positives = 30/45 (66%), Gaps = 2/45 (4%)
Frame = +2
Query: 497 EYRVLVTGLPPSGSWQDLKDHMREAGDVCFAXTFKD--GSGVVEF 625
EYR++V L SWQDLKD+MR+AG+V +A K GVVEF
Sbjct: 114 EYRLIVENLSSRVSWQDLKDYMRQAGEVTYADAHKQRRNEGVVEF 158
>AE014297-1720|AAF54968.1| 329|Drosophila melanogaster CG10851-PB,
isoform B protein.
Length = 329
Score = 49.6 bits (113), Expect = 3e-06
Identities = 24/45 (53%), Positives = 30/45 (66%), Gaps = 2/45 (4%)
Frame = +2
Query: 497 EYRVLVTGLPPSGSWQDLKDHMREAGDVCFAXTFKD--GSGVVEF 625
EYR++V L SWQDLKD+MR+AG+V +A K GVVEF
Sbjct: 119 EYRLIVENLSSRVSWQDLKDYMRQAGEVTYADAHKQRRNEGVVEF 163
>AE014297-1718|AAN13575.1| 350|Drosophila melanogaster CG10851-PC,
isoform C protein.
Length = 350
Score = 49.6 bits (113), Expect = 3e-06
Identities = 24/45 (53%), Positives = 30/45 (66%), Gaps = 2/45 (4%)
Frame = +2
Query: 497 EYRVLVTGLPPSGSWQDLKDHMREAGDVCFAXTFKD--GSGVVEF 625
EYR++V L SWQDLKD+MR+AG+V +A K GVVEF
Sbjct: 114 EYRLIVENLSSRVSWQDLKDYMRQAGEVTYADAHKQRRNEGVVEF 158
>AE014297-1717|AAF54969.2| 350|Drosophila melanogaster CG10851-PA,
isoform A protein.
Length = 350
Score = 49.6 bits (113), Expect = 3e-06
Identities = 24/45 (53%), Positives = 30/45 (66%), Gaps = 2/45 (4%)
Frame = +2
Query: 497 EYRVLVTGLPPSGSWQDLKDHMREAGDVCFAXTFKD--GSGVVEF 625
EYR++V L SWQDLKD+MR+AG+V +A K GVVEF
Sbjct: 114 EYRLIVENLSSRVSWQDLKDYMRQAGEVTYADAHKQRRNEGVVEF 158
>AE014297-1719|AAN13576.1| 346|Drosophila melanogaster CG10851-PE,
isoform E protein.
Length = 346
Score = 37.9 bits (84), Expect = 0.011
Identities = 22/45 (48%), Positives = 29/45 (64%), Gaps = 2/45 (4%)
Frame = +2
Query: 497 EYRVLVTGLPPSGSWQDLKDHMREAGDVCFAXTFKD--GSGVVEF 625
EYR++V L S +DLKD+MR+AG+V +A K GVVEF
Sbjct: 114 EYRLIVENL----SSRDLKDYMRQAGEVTYADAHKQRRNEGVVEF 154
>AY118772-1|AAM50632.1| 430|Drosophila melanogaster GH11495p
protein.
Length = 430
Score = 36.3 bits (80), Expect = 0.034
Identities = 16/40 (40%), Positives = 24/40 (60%)
Frame = +2
Query: 506 VLVTGLPPSGSWQDLKDHMREAGDVCFAXTFKDGSGVVEF 625
+++ +P + +WQ L+D RE GDV FA + GVV F
Sbjct: 363 IIIKNVPITCTWQTLRDKFREIGDVKFAEIRGNDVGVVRF 402
>AE014297-952|AAF54387.1| 632|Drosophila melanogaster CG9373-PA
protein.
Length = 632
Score = 36.3 bits (80), Expect = 0.034
Identities = 16/40 (40%), Positives = 24/40 (60%)
Frame = +2
Query: 506 VLVTGLPPSGSWQDLKDHMREAGDVCFAXTFKDGSGVVEF 625
+++ +P + +WQ L+D RE GDV FA + GVV F
Sbjct: 565 IIIKNVPITCTWQTLRDKFREIGDVKFAEIRGNDVGVVRF 604
Score = 35.9 bits (79), Expect = 0.045
Identities = 12/27 (44%), Positives = 19/27 (70%)
Frame = +3
Query: 171 RNECRIYVGNLPPDIRTKDIQDLFYNV 251
R CR+Y+ N+P D R +D++DLF +
Sbjct: 54 RRNCRVYISNIPYDYRWQDLKDLFRRI 80
Score = 30.3 bits (65), Expect = 2.2
Identities = 15/38 (39%), Positives = 20/38 (52%), Gaps = 1/38 (2%)
Frame = +2
Query: 503 RVLVTGLPPSGSWQDLKDHMRE-AGDVCFAXTFKDGSG 613
RV ++ +P WQDLKD R G + + F D SG
Sbjct: 58 RVYISNIPYDYRWQDLKDLFRRIVGSIEYVQLFFDESG 95
>AY061111-1|AAL28659.1| 494|Drosophila melanogaster LD09584p
protein.
Length = 494
Score = 31.5 bits (68), Expect = 0.97
Identities = 15/33 (45%), Positives = 20/33 (60%)
Frame = +2
Query: 521 LPPSGSWQDLKDHMREAGDVCFAXTFKDGSGVV 619
LPP+G +Q + D +R AG VC A + G G V
Sbjct: 238 LPPAGYFQAVYDAVRSAGGVCIADEVQVGFGRV 270
>AE014296-2311|AAF49794.2| 494|Drosophila melanogaster CG8745-PA
protein.
Length = 494
Score = 31.5 bits (68), Expect = 0.97
Identities = 15/33 (45%), Positives = 20/33 (60%)
Frame = +2
Query: 521 LPPSGSWQDLKDHMREAGDVCFAXTFKDGSGVV 619
LPP+G +Q + D +R AG VC A + G G V
Sbjct: 238 LPPAGYFQAVYDAVRSAGGVCIADEVQVGFGRV 270
>AY061516-1|AAL29064.1| 418|Drosophila melanogaster LD46870p
protein.
Length = 418
Score = 31.1 bits (67), Expect = 1.3
Identities = 12/26 (46%), Positives = 18/26 (69%)
Frame = +3
Query: 168 NRNECRIYVGNLPPDIRTKDIQDLFY 245
+RN +YVGNLP +I +++D FY
Sbjct: 228 DRNITTLYVGNLPEEITEPELRDQFY 253
>AE014297-14|AAF52166.2| 418|Drosophila melanogaster CG14641-PA
protein.
Length = 418
Score = 31.1 bits (67), Expect = 1.3
Identities = 12/26 (46%), Positives = 18/26 (69%)
Frame = +3
Query: 168 NRNECRIYVGNLPPDIRTKDIQDLFY 245
+RN +YVGNLP +I +++D FY
Sbjct: 228 DRNITTLYVGNLPEEITEPELRDQFY 253
>AY052060-1|AAK93484.1| 495|Drosophila melanogaster LP09632p
protein.
Length = 495
Score = 30.7 bits (66), Expect = 1.7
Identities = 13/38 (34%), Positives = 23/38 (60%)
Frame = +3
Query: 180 CRIYVGNLPPDIRTKDIQDLFYNVRKSNVR*PKEQKRS 293
C +YVGN+P ++ T I+ F N + ++ K +KR+
Sbjct: 215 CSLYVGNIPFNMTTSAIKAYFANAMRVDIGVLKREKRA 252
>AJ295236-1|CAC16735.1| 495|Drosophila melanogaster painting of
fourth protein protein.
Length = 495
Score = 30.7 bits (66), Expect = 1.7
Identities = 13/38 (34%), Positives = 23/38 (60%)
Frame = +3
Query: 180 CRIYVGNLPPDIRTKDIQDLFYNVRKSNVR*PKEQKRS 293
C +YVGN+P ++ T I+ F N + ++ K +KR+
Sbjct: 215 CSLYVGNIPFNMTTSAIKAYFANAMRVDIGVLKREKRA 252
>AE013599-3935|AAM68326.1| 495|Drosophila melanogaster CG3691-PB,
isoform B protein.
Length = 495
Score = 30.7 bits (66), Expect = 1.7
Identities = 13/38 (34%), Positives = 23/38 (60%)
Frame = +3
Query: 180 CRIYVGNLPPDIRTKDIQDLFYNVRKSNVR*PKEQKRS 293
C +YVGN+P ++ T I+ F N + ++ K +KR+
Sbjct: 215 CSLYVGNIPFNMTTSAIKAYFANAMRVDIGVLKREKRA 252
>AE013599-3934|AAF47254.1| 495|Drosophila melanogaster CG3691-PA,
isoform A protein.
Length = 495
Score = 30.7 bits (66), Expect = 1.7
Identities = 13/38 (34%), Positives = 23/38 (60%)
Frame = +3
Query: 180 CRIYVGNLPPDIRTKDIQDLFYNVRKSNVR*PKEQKRS 293
C +YVGN+P ++ T I+ F N + ++ K +KR+
Sbjct: 215 CSLYVGNIPFNMTTSAIKAYFANAMRVDIGVLKREKRA 252
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,589,922
Number of Sequences: 53049
Number of extensions: 372891
Number of successful extensions: 934
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 884
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 934
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2621070450
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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