Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP02_F_N07
(463 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q0PXZ5 Cluster: Putative ribosomal protein L35Ae; n=1; ... 89 3e-17
UniRef50_Q86E43 Cluster: Clone ZZZ247 mRNA sequence; n=4; Eukary... 85 9e-16
UniRef50_Q9VNB9 Cluster: CG2099-PA; n=21; Eukaryota|Rep: CG2099-... 84 1e-15
UniRef50_P18077 Cluster: 60S ribosomal protein L35a; n=47; Eutel... 84 2e-15
UniRef50_Q8I7D7 Cluster: Putative 60S ribosomal protein L35a; n=... 78 8e-14
UniRef50_P49180 Cluster: 60S ribosomal protein L35a; n=4; Eukary... 74 2e-12
UniRef50_Q8W1C9 Cluster: Ribosomal protein L35A; n=13; Eukaryota... 61 1e-08
UniRef50_UPI0001552EFF Cluster: PREDICTED: similar to ribosomal ... 54 2e-06
UniRef50_Q5GAS3 Cluster: Rpl35A; n=1; Zea mays|Rep: Rpl35A - Zea... 54 2e-06
UniRef50_A5K584 Cluster: 60S ribosomal protein L33-B, putative; ... 52 8e-06
UniRef50_Q4QHL3 Cluster: Ribosomal protein l35a, putative; n=6; ... 49 6e-05
UniRef50_A4S1R2 Cluster: Ribosomal protein L35a, component of cy... 48 1e-04
UniRef50_Q4WX73 Cluster: 60S ribosomal protein L35Ae; n=4; Peziz... 48 1e-04
UniRef50_Q5KFG9 Cluster: 60s ribosomal protein l33-b, putative; ... 47 2e-04
UniRef50_P41056 Cluster: 60S ribosomal protein L33-B; n=42; Euka... 47 2e-04
UniRef50_A0CFU8 Cluster: Chromosome undetermined scaffold_177, w... 45 7e-04
UniRef50_A2DSF3 Cluster: Ribosomal protein L35Ae, putative; n=4;... 42 0.005
UniRef50_UPI0000D9A2D5 Cluster: PREDICTED: similar to ribosomal ... 40 0.026
UniRef50_Q7QXX7 Cluster: GLP_479_47445_47074; n=1; Giardia lambl... 38 0.11
UniRef50_Q55BN7 Cluster: Ribosomal protein L35a; n=1; Dictyostel... 38 0.14
UniRef50_UPI0000DA3A09 Cluster: PREDICTED: similar to ribosomal ... 36 0.43
UniRef50_A6R3W0 Cluster: Putative uncharacterized protein; n=2; ... 35 0.75
UniRef50_Q0VN96 Cluster: Putative uncharacterized protein; n=1; ... 33 4.0
UniRef50_Q8SSF3 Cluster: 60S RIBOSOMAL PROTEIN L35A; n=1; Enceph... 32 7.0
>UniRef50_Q0PXZ5 Cluster: Putative ribosomal protein L35Ae; n=1;
Diaphorina citri|Rep: Putative ribosomal protein L35Ae -
Diaphorina citri (Asian citrus psyllid)
Length = 172
Score = 89.4 bits (212), Expect = 3e-17
Identities = 51/104 (49%), Positives = 63/104 (60%), Gaps = 1/104 (0%)
Frame = +3
Query: 153 KAXKPRHGRLYAKAVFRGYKRGLRNQHENTXSPQGLKEQXTVMMHSFMLASIASMCTELX 332
K + RHGRLYA+A+F G+KRG RNQH NT S +++ T F + C L
Sbjct: 57 KRLRLRHGRLYARAIFTGFKRGQRNQHPNT-SLLAIEKCNTKEDARFY---VGKRCVFLY 112
Query: 333 RGHQFPEVPVGK-KTKLRAIWGXVTRPHGNSGSVRAKXKSNLPA 461
+ P K K++LRAIWG VTRPHG+SGSVRAK NLPA
Sbjct: 113 KAKTKELKPHSKRKSRLRAIWGKVTRPHGSSGSVRAKFHRNLPA 156
>UniRef50_Q86E43 Cluster: Clone ZZZ247 mRNA sequence; n=4;
Eukaryota|Rep: Clone ZZZ247 mRNA sequence - Schistosoma
japonicum (Blood fluke)
Length = 128
Score = 84.6 bits (200), Expect = 9e-16
Identities = 46/101 (45%), Positives = 60/101 (59%), Gaps = 3/101 (2%)
Frame = +3
Query: 168 RHGRLYAKAVFRGYKRGLRNQHENTXSPQ--GLKEQXTVMMHSFMLASIASMCTELXRGH 341
R GRLY KA F GY+RGLRNQHE+T + G+ E+ + + + C + R
Sbjct: 18 RPGRLYVKATFTGYRRGLRNQHESTALLRIDGVTERKSTEFY------LGKRCVYVYRAE 71
Query: 342 QFPEVPVGKK-TKLRAIWGXVTRPHGNSGSVRAKXKSNLPA 461
+ P +K TK+R IWG + RPHGNSG VRA+ K NLPA
Sbjct: 72 KKKVFPRRQKPTKIRVIWGKIMRPHGNSGIVRARFKHNLPA 112
>UniRef50_Q9VNB9 Cluster: CG2099-PA; n=21; Eukaryota|Rep: CG2099-PA
- Drosophila melanogaster (Fruit fly)
Length = 157
Score = 84.2 bits (199), Expect = 1e-15
Identities = 45/99 (45%), Positives = 58/99 (58%), Gaps = 2/99 (2%)
Frame = +3
Query: 168 RHGRLYAKAVFRGYKRGLRNQHENTXSPQGLKEQXTVMMHSFMLASIASMCTELXRGHQF 347
RHGRL+AKAVF GYKRGLRNQHEN Q + + + C + +
Sbjct: 46 RHGRLFAKAVFTGYKRGLRNQHEN----QAILKIEGARRKEHGSFYVGKRCVYVYKAETK 101
Query: 348 PEVP--VGKKTKLRAIWGXVTRPHGNSGSVRAKXKSNLP 458
VP +KT++RA+WG VTR HGN+G+VRA+ NLP
Sbjct: 102 KCVPQHPERKTRVRAVWGKVTRIHGNTGAVRARFNRNLP 140
>UniRef50_P18077 Cluster: 60S ribosomal protein L35a; n=47;
Euteleostomi|Rep: 60S ribosomal protein L35a - Homo
sapiens (Human)
Length = 110
Score = 83.8 bits (198), Expect = 2e-15
Identities = 45/96 (46%), Positives = 54/96 (56%)
Frame = +3
Query: 174 GRLYAKAVFRGYKRGLRNQHENTXSPQGLKEQXTVMMHSFMLASIASMCTELXRGHQFPE 353
GRL++KA+F GYKRGLRNQ E+T L + V + C + +
Sbjct: 3 GRLWSKAIFAGYKRGLRNQREHTA----LLKIEGVYARDETEFYLGKRCAYVYKAKNNTV 58
Query: 354 VPVGKKTKLRAIWGXVTRPHGNSGSVRAKXKSNLPA 461
P GK K R IWG VTR HGNSG VRAK +SNLPA
Sbjct: 59 TPGGKPNKTRVIWGKVTRAHGNSGMVRAKFRSNLPA 94
>UniRef50_Q8I7D7 Cluster: Putative 60S ribosomal protein L35a; n=1;
Ciona intestinalis|Rep: Putative 60S ribosomal protein
L35a - Ciona intestinalis (Transparent sea squirt)
Length = 122
Score = 78.2 bits (184), Expect = 8e-14
Identities = 42/97 (43%), Positives = 55/97 (56%), Gaps = 2/97 (2%)
Frame = +3
Query: 177 RLYAKAVFRGYKRGLRNQHENTX--SPQGLKEQXTVMMHSFMLASIASMCTELXRGHQFP 350
RL+ KAVF GY RGLRNQHE+T +G+ + + + C + + +
Sbjct: 4 RLWCKAVFTGYTRGLRNQHEHTALLRIEGVTNKEDTDFY------LGKKCAYVYKAKRKT 57
Query: 351 EVPVGKKTKLRAIWGXVTRPHGNSGSVRAKXKSNLPA 461
+ P G+ K R IWG VTR HGNSG VRA K+NLPA
Sbjct: 58 KTPRGEPNKTRVIWGKVTRSHGNSGVVRATFKTNLPA 94
>UniRef50_P49180 Cluster: 60S ribosomal protein L35a; n=4;
Eukaryota|Rep: 60S ribosomal protein L35a -
Caenorhabditis elegans
Length = 124
Score = 73.7 bits (173), Expect = 2e-12
Identities = 44/109 (40%), Positives = 58/109 (53%), Gaps = 4/109 (3%)
Frame = +3
Query: 144 VLRKAXKPRHGRLYAKAVFRGYKRGLRNQHENTX--SPQGL--KEQXTVMMHSFMLASIA 311
V R+ P GRLY KA+F G+KRGLR Q E+T +G+ KE ++
Sbjct: 6 VARRPSAPTTGRLYVKAIFTGFKRGLRTQSEHTSLLKLEGVFNKEDAGFYAGKRVVYLYK 65
Query: 312 SMCTELXRGHQFPEVPVGKKTKLRAIWGXVTRPHGNSGSVRAKXKSNLP 458
+ L GH T+ RAIWG +TRPHGN+G+VRAK N+P
Sbjct: 66 AHNKTLKTGHTVA-------TRTRAIWGKITRPHGNAGAVRAKFHHNIP 107
>UniRef50_Q8W1C9 Cluster: Ribosomal protein L35A; n=13;
Eukaryota|Rep: Ribosomal protein L35A - Zea mays (Maize)
Length = 112
Score = 60.9 bits (141), Expect = 1e-08
Identities = 40/97 (41%), Positives = 50/97 (51%), Gaps = 3/97 (3%)
Frame = +3
Query: 177 RLYAKAVFRGYKRGLRNQHENTXSPQ--GLKEQXTVMMHSFM-LASIASMCTELXRGHQF 347
RLY + GYKR NQ+E T Q G+ + V ++ +A I T+
Sbjct: 11 RLYVRGTILGYKRSKSNQYETTSLVQIEGVNTKEDVAWYAGKRMAYIYKAKTK------- 63
Query: 348 PEVPVGKKTKLRAIWGXVTRPHGNSGSVRAKXKSNLP 458
+T+ R IWG VTRPHGNSG VRAK KSNLP
Sbjct: 64 -----SSETRYRCIWGKVTRPHGNSGVVRAKFKSNLP 95
Score = 31.5 bits (68), Expect = 9.2
Identities = 11/29 (37%), Positives = 18/29 (62%)
Frame = +2
Query: 254 RIEGAKXRNDAFFYAGKHCVYVYRAXKRT 340
+IEG + D +YAGK Y+Y+A ++
Sbjct: 36 QIEGVNTKEDVAWYAGKRMAYIYKAKTKS 64
>UniRef50_UPI0001552EFF Cluster: PREDICTED: similar to ribosomal
protein L35a; n=7; Euarchontoglires|Rep: PREDICTED:
similar to ribosomal protein L35a - Mus musculus
Length = 86
Score = 54.0 bits (124), Expect = 2e-06
Identities = 25/52 (48%), Positives = 29/52 (55%)
Frame = +3
Query: 306 IASMCTELXRGHQFPEVPVGKKTKLRAIWGXVTRPHGNSGSVRAKXKSNLPA 461
+ C + + P GK K R IWG VTR HGNS VRAK +SNLPA
Sbjct: 19 LGKRCAYVYKAKNNTMTPGGKLNKTRMIWGKVTRAHGNSSMVRAKFRSNLPA 70
Score = 42.7 bits (96), Expect = 0.004
Identities = 17/34 (50%), Positives = 21/34 (61%)
Frame = +2
Query: 254 RIEGAKXRNDAFFYAGKHCVYVYRAXKRTPIPGG 355
+IEG R++ FY GK C YVY+A T PGG
Sbjct: 5 KIEGVYARDETEFYLGKRCAYVYKAKNNTMTPGG 38
>UniRef50_Q5GAS3 Cluster: Rpl35A; n=1; Zea mays|Rep: Rpl35A - Zea
mays (Maize)
Length = 139
Score = 54.0 bits (124), Expect = 2e-06
Identities = 23/30 (76%), Positives = 25/30 (83%)
Frame = +3
Query: 369 KTKLRAIWGXVTRPHGNSGSVRAKXKSNLP 458
+T+ R IWG VTRPHGNSG VRAK KSNLP
Sbjct: 86 ETRYRCIWGKVTRPHGNSGVVRAKFKSNLP 115
Score = 31.5 bits (68), Expect = 9.2
Identities = 11/29 (37%), Positives = 18/29 (62%)
Frame = +2
Query: 254 RIEGAKXRNDAFFYAGKHCVYVYRAXKRT 340
+IEG + D +YAGK Y+Y+A ++
Sbjct: 56 QIEGVNTKEDVAWYAGKRMAYIYKAKTKS 84
>UniRef50_A5K584 Cluster: 60S ribosomal protein L33-B, putative;
n=5; Plasmodium|Rep: 60S ribosomal protein L33-B,
putative - Plasmodium vivax
Length = 146
Score = 51.6 bits (118), Expect = 8e-06
Identities = 31/94 (32%), Positives = 44/94 (46%)
Frame = +3
Query: 177 RLYAKAVFRGYKRGLRNQHENTXSPQGLKEQXTVMMHSFMLASIASMCTELXRGHQFPEV 356
RLY K V GYKR RNQ N + ++ T F + + + H
Sbjct: 45 RLYEKGVILGYKRSQRNQDPN-FTLISIRNVHTKKHAQFYVGKKIAYVYRTNKHHD---- 99
Query: 357 PVGKKTKLRAIWGXVTRPHGNSGSVRAKXKSNLP 458
K++ IWG V R HGNSG +RA+ ++N+P
Sbjct: 100 ----GVKIKCIWGKVCRTHGNSGVIRARFRTNIP 129
>UniRef50_Q4QHL3 Cluster: Ribosomal protein l35a, putative; n=6;
Trypanosomatidae|Rep: Ribosomal protein l35a, putative -
Leishmania major
Length = 144
Score = 48.8 bits (111), Expect = 6e-05
Identities = 30/98 (30%), Positives = 47/98 (47%), Gaps = 3/98 (3%)
Frame = +3
Query: 177 RLYAKAVFRGYKRGLRNQHENTX--SPQGLKEQXTVMMHSFMLASIASMCTELXRGHQFP 350
RLY K GY RGL Q + T + + + + ++ R ++
Sbjct: 32 RLYMKGTLAGYTRGLHGQTKQTALVRVENVNTREDATWYVGKRVCYVYHGKKVKRCVRWS 91
Query: 351 EVPVGKKTKLRAIWGXVTRPHGNSGSVRAKXK-SNLPA 461
+ P + T RA+WG VTRPHGN+G +R K +++PA
Sbjct: 92 KAPARRSTT-RALWGRVTRPHGNAGMMRVKFNGASVPA 128
>UniRef50_A4S1R2 Cluster: Ribosomal protein L35a, component of
cytosolic 80S ribosome and 60S large subunit; n=1;
Ostreococcus lucimarinus CCE9901|Rep: Ribosomal protein
L35a, component of cytosolic 80S ribosome and 60S large
subunit - Ostreococcus lucimarinus CCE9901
Length = 109
Score = 48.0 bits (109), Expect = 1e-04
Identities = 32/95 (33%), Positives = 44/95 (46%)
Frame = +3
Query: 177 RLYAKAVFRGYKRGLRNQHENTXSPQGLKEQXTVMMHSFMLASIASMCTELXRGHQFPEV 356
RLY + + GYKR NQ+ +T +K + S +C + +
Sbjct: 8 RLYVRGLILGYKRARTNQYNHTSL---IKLEGVSDAPSTAFYGGKKLC------YVYKAK 58
Query: 357 PVGKKTKLRAIWGXVTRPHGNSGSVRAKXKSNLPA 461
+ T R IWG V R HG SG VRAK KS+LP+
Sbjct: 59 TKKQGTAYRTIWGKVMRAHGTSGVVRAKFKSHLPS 93
>UniRef50_Q4WX73 Cluster: 60S ribosomal protein L35Ae; n=4;
Pezizomycotina|Rep: 60S ribosomal protein L35Ae -
Aspergillus fumigatus (Sartorya fumigata)
Length = 119
Score = 47.6 bits (108), Expect = 1e-04
Identities = 19/29 (65%), Positives = 23/29 (79%)
Frame = +3
Query: 372 TKLRAIWGXVTRPHGNSGSVRAKXKSNLP 458
+ +R IWG VTRPHGNSG VRA+ + NLP
Sbjct: 74 SNIRVIWGKVTRPHGNSGVVRAQFRHNLP 102
>UniRef50_Q5KFG9 Cluster: 60s ribosomal protein l33-b, putative;
n=2; Filobasidiella neoformans|Rep: 60s ribosomal
protein l33-b, putative - Cryptococcus neoformans
(Filobasidiella neoformans)
Length = 178
Score = 47.2 bits (107), Expect = 2e-04
Identities = 31/95 (32%), Positives = 47/95 (49%)
Frame = +3
Query: 177 RLYAKAVFRGYKRGLRNQHENTXSPQGLKEQXTVMMHSFMLASIASMCTELXRGHQFPEV 356
RLY K G+KRG RN N Q ++ L + + R E+
Sbjct: 77 RLYIKGRILGHKRGKRNSRPNQSLLQ-IEGVDNKEAAGHYLGKRVAYVYKAKR-----EI 130
Query: 357 PVGKKTKLRAIWGXVTRPHGNSGSVRAKXKSNLPA 461
+++R IWG ++R HGNSG+V++K ++NLPA
Sbjct: 131 ---NGSRVRVIWGRISRSHGNSGAVKSKFRTNLPA 162
>UniRef50_P41056 Cluster: 60S ribosomal protein L33-B; n=42;
Eukaryota|Rep: 60S ribosomal protein L33-B -
Saccharomyces cerevisiae (Baker's yeast)
Length = 107
Score = 46.8 bits (106), Expect = 2e-04
Identities = 19/30 (63%), Positives = 24/30 (80%)
Frame = +3
Query: 372 TKLRAIWGXVTRPHGNSGSVRAKXKSNLPA 461
+K+R +WG VTR HGNSG VRA ++NLPA
Sbjct: 62 SKIRVMWGKVTRTHGNSGVVRATFRNNLPA 91
Score = 32.7 bits (71), Expect = 4.0
Identities = 14/27 (51%), Positives = 16/27 (59%)
Frame = +2
Query: 254 RIEGAKXRNDAFFYAGKHCVYVYRAXK 334
+IEG +A FY GK YVYRA K
Sbjct: 31 KIEGVATPQEAQFYLGKRIAYVYRASK 57
>UniRef50_A0CFU8 Cluster: Chromosome undetermined scaffold_177,
whole genome shotgun sequence; n=9; Eukaryota|Rep:
Chromosome undetermined scaffold_177, whole genome
shotgun sequence - Paramecium tetraurelia
Length = 129
Score = 45.2 bits (102), Expect = 7e-04
Identities = 29/94 (30%), Positives = 45/94 (47%)
Frame = +3
Query: 177 RLYAKAVFRGYKRGLRNQHENTXSPQGLKEQXTVMMHSFMLASIASMCTELXRGHQFPEV 356
RL+ KAVF G++R Q+EN + ++ V F + + + H
Sbjct: 28 RLWVKAVFTGFRRSKVQQNENQALLK-IEHVNDVASSRFYWGKRVAY---IYKAHSLKN- 82
Query: 357 PVGKKTKLRAIWGXVTRPHGNSGSVRAKXKSNLP 458
TK RAIWG +++ HG++G V A+ NLP
Sbjct: 83 ----NTKFRAIWGRISKSHGSNGVVTARFGRNLP 112
>UniRef50_A2DSF3 Cluster: Ribosomal protein L35Ae, putative; n=4;
Trichomonas vaginalis G3|Rep: Ribosomal protein L35Ae,
putative - Trichomonas vaginalis G3
Length = 102
Score = 42.3 bits (95), Expect = 0.005
Identities = 16/23 (69%), Positives = 19/23 (82%)
Frame = +3
Query: 390 WGXVTRPHGNSGSVRAKXKSNLP 458
WG +T+PHGNSG VRAK + NLP
Sbjct: 63 WGVITQPHGNSGVVRAKFEKNLP 85
>UniRef50_UPI0000D9A2D5 Cluster: PREDICTED: similar to ribosomal
protein L35a; n=1; Macaca mulatta|Rep: PREDICTED:
similar to ribosomal protein L35a - Macaca mulatta
Length = 80
Score = 39.9 bits (89), Expect = 0.026
Identities = 17/23 (73%), Positives = 20/23 (86%)
Frame = +3
Query: 174 GRLYAKAVFRGYKRGLRNQHENT 242
GRL++KAVF GYKRG RNQ E+T
Sbjct: 3 GRLWSKAVFAGYKRGPRNQREHT 25
Score = 33.5 bits (73), Expect = 2.3
Identities = 14/19 (73%), Positives = 16/19 (84%)
Frame = +3
Query: 405 RPHGNSGSVRAKXKSNLPA 461
+ HGNSG VRAK +SNLPA
Sbjct: 46 KAHGNSGMVRAKFQSNLPA 64
>UniRef50_Q7QXX7 Cluster: GLP_479_47445_47074; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_479_47445_47074 - Giardia lamblia
ATCC 50803
Length = 123
Score = 37.9 bits (84), Expect = 0.11
Identities = 15/26 (57%), Positives = 20/26 (76%)
Frame = +3
Query: 381 RAIWGXVTRPHGNSGSVRAKXKSNLP 458
+ I+G + RPHGNSG VRA+ +NLP
Sbjct: 59 KPIFGKICRPHGNSGMVRARFYTNLP 84
>UniRef50_Q55BN7 Cluster: Ribosomal protein L35a; n=1; Dictyostelium
discoideum AX4|Rep: Ribosomal protein L35a -
Dictyostelium discoideum AX4
Length = 105
Score = 37.5 bits (83), Expect = 0.14
Identities = 25/94 (26%), Positives = 42/94 (44%)
Frame = +3
Query: 177 RLYAKAVFRGYKRGLRNQHENTXSPQGLKEQXTVMMHSFMLASIASMCTELXRGHQFPEV 356
++Y+K V GY+R Q+ N +K + V +C + + + +
Sbjct: 3 KIYSKGVVLGYRRSQATQYPNISL---IKIEGVVSREDSTFYLGKKVCL-VSKVSKSAKN 58
Query: 357 PVGKKTKLRAIWGXVTRPHGNSGSVRAKXKSNLP 458
P G K WG + + HG+SG V+A+ NLP
Sbjct: 59 PTGHKIS----WGKICKTHGSSGVVQARFARNLP 88
>UniRef50_UPI0000DA3A09 Cluster: PREDICTED: similar to ribosomal
protein L35a; n=1; Rattus norvegicus|Rep: PREDICTED:
similar to ribosomal protein L35a - Rattus norvegicus
Length = 106
Score = 35.9 bits (79), Expect = 0.43
Identities = 17/57 (29%), Positives = 27/57 (47%)
Frame = +2
Query: 185 RKGRIQRI*AWFTQPAREHRVSSRIEGAKXRNDAFFYAGKHCVYVYRAXKRTPIPGG 355
RK +Q +W + + + + R EG R++ + K C YVY+A PGG
Sbjct: 26 RKAVVQGHFSWLGVRSLKPKSTDRAEGVYARDETELHLAKRCAYVYKAKISAVTPGG 82
>UniRef50_A6R3W0 Cluster: Putative uncharacterized protein; n=2;
Pezizomycotina|Rep: Putative uncharacterized protein -
Ajellomyces capsulatus NAm1
Length = 102
Score = 35.1 bits (77), Expect = 0.75
Identities = 29/86 (33%), Positives = 39/86 (45%), Gaps = 1/86 (1%)
Frame = +3
Query: 171 HG-RLYAKAVFRGYKRGLRNQHENTXSPQGLKEQXTVMMHSFMLASIASMCTELXRGHQF 347
HG RLY K Y+RG R + NT + L+ + +F L + R
Sbjct: 5 HGHRLYVKGRHLSYQRGKRATNPNTSLIK-LEGVEDIKAANFYLGKKVAFVYRAKR---- 59
Query: 348 PEVPVGKKTKLRAIWGXVTRPHGNSG 425
EV + +K+R IWG VTR HG G
Sbjct: 60 -EV---QGSKIRVIWGKVTRTHGQLG 81
>UniRef50_Q0VN96 Cluster: Putative uncharacterized protein; n=1;
Alcanivorax borkumensis SK2|Rep: Putative
uncharacterized protein - Alcanivorax borkumensis
(strain SK2 / ATCC 700651 / DSM 11573)
Length = 204
Score = 32.7 bits (71), Expect = 4.0
Identities = 17/41 (41%), Positives = 23/41 (56%)
Frame = -3
Query: 458 REVRLXLGSDTARVAMWAGHXAPDSTQLGFFANGDLRELVS 336
++VRL LG DT RV H AP +T+L F + +VS
Sbjct: 94 KQVRLALGEDTQRVRRVILHTAPANTELQTFLTDKVDGMVS 134
>UniRef50_Q8SSF3 Cluster: 60S RIBOSOMAL PROTEIN L35A; n=1;
Encephalitozoon cuniculi|Rep: 60S RIBOSOMAL PROTEIN L35A
- Encephalitozoon cuniculi
Length = 113
Score = 31.9 bits (69), Expect = 7.0
Identities = 13/23 (56%), Positives = 17/23 (73%)
Frame = +3
Query: 387 IWGXVTRPHGNSGSVRAKXKSNL 455
+ G +TR HGNSG+VRA+ NL
Sbjct: 70 VHGVITRIHGNSGAVRARFTRNL 92
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 408,386,375
Number of Sequences: 1657284
Number of extensions: 7188145
Number of successful extensions: 16936
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 16572
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16917
length of database: 575,637,011
effective HSP length: 94
effective length of database: 419,852,315
effective search space used: 24771286585
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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