Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP02_F_N05
(654 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
11_01_0740 + 6243517-6243526,6244822-6245323,6245415-6245496,624... 100 1e-21
05_01_0490 + 4083768-4083775,4083845-4084336,4084441-4084522,408... 98 5e-21
03_02_0897 - 12239375-12239458,12240035-12240116,12240213-122407... 93 1e-19
10_08_0141 + 15159160-15159306,15159708-15159815,15159958-151600... 34 0.11
07_03_1509 - 27246721-27247350 29 2.4
07_03_1584 + 27907345-27907357,27907693-27908039,27908202-279083... 29 3.2
01_06_0212 + 27575406-27575604,27575723-27576241,27576371-27576387 29 3.2
01_05_0379 + 21630223-21631188 29 3.2
12_02_0957 + 24807261-24807311,24807436-24807773,24808727-248089... 28 5.6
12_02_0615 + 21242819-21243201,21244510-21244630,21244728-212448... 28 5.6
10_08_0327 + 16797366-16800639,16800979-16801067,16801120-16801593 28 7.5
03_05_0827 + 28016157-28017575 28 7.5
03_02_0491 + 8854438-8854657,8854897-8854942,8855268-8855307,885... 28 7.5
>11_01_0740 +
6243517-6243526,6244822-6245323,6245415-6245496,
6245741-6245821
Length = 224
Score = 100 bits (239), Expect = 1e-21
Identities = 42/49 (85%), Positives = 46/49 (93%)
Frame = +1
Query: 271 KNCGKDQFHIRMRLHPFHVIRINKMLSCAGADRLQTGMRGAFGKPQGYC 417
KN GKD FH+R+R+HPFHV+RINKMLSCAGADRLQTGMRGAFGKPQG C
Sbjct: 78 KNAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGTC 126
Score = 89.0 bits (211), Expect = 3e-18
Identities = 43/82 (52%), Positives = 54/82 (65%)
Frame = +2
Query: 407 RATVXRVRIGQPIMSVRSSDRWKAQVIEALRRAKFKFPGRQKIYVSKKWGFTKYERDEFD 586
+ T RV IGQ ++SVR + EALRRAKFKFPGRQKI S+KWGFTK+ R+E+
Sbjct: 123 QGTCARVDIGQVLLSVRCKESNAKHAEEALRRAKFKFPGRQKIIHSRKWGFTKFTREEYV 182
Query: 587 KLREEGRLANDGCIVXYRPEHG 652
KL+ EGR+ +DG HG
Sbjct: 183 KLKAEGRIMSDGVNAQLLGSHG 204
Score = 85.0 bits (201), Expect = 5e-17
Identities = 40/69 (57%), Positives = 47/69 (68%)
Frame = +3
Query: 114 VPDPKIRIFDLGKKRATVDDFPLCVHLVSDEYEQLSSEALEAGRICCNKYLAKELRKGSV 293
VPDPKIRI+D+G K+ VD+FP CVHLVS E E +SSEALEA RI CNKY+ K K +
Sbjct: 26 VPDPKIRIYDVGMKKKGVDEFPYCVHLVSWEKENVSSEALEAARIACNKYMTKNAGKDAF 85
Query: 294 PYPHETSPF 320
PF
Sbjct: 86 HLRVRVHPF 94
Score = 56.8 bits (131), Expect = 1e-08
Identities = 25/35 (71%), Positives = 27/35 (77%)
Frame = +2
Query: 38 MGRRPARCYRYCKNKPYPKSRFCRGCT*SQDPYLR 142
MGRRPARCYR KNKPYPKSR+CRG DP +R
Sbjct: 1 MGRRPARCYRQIKNKPYPKSRYCRGV---PDPKIR 32
>05_01_0490 +
4083768-4083775,4083845-4084336,4084441-4084522,
4086671-4087357,4087555-4087813,4088435-4088558,
4089474-4089564
Length = 580
Score = 98.3 bits (234), Expect = 5e-21
Identities = 41/49 (83%), Positives = 46/49 (93%)
Frame = +1
Query: 271 KNCGKDQFHIRMRLHPFHVIRINKMLSCAGADRLQTGMRGAFGKPQGYC 417
K+ GKD FH+R+R+HPFHV+RINKMLSCAGADRLQTGMRGAFGKPQG C
Sbjct: 74 KSAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGTC 122
Score = 87.8 bits (208), Expect = 7e-18
Identities = 41/72 (56%), Positives = 50/72 (69%)
Frame = +2
Query: 407 RATVXRVRIGQPIMSVRSSDRWKAQVIEALRRAKFKFPGRQKIYVSKKWGFTKYERDEFD 586
+ T RV IGQ ++SVR EALRRAKFKFPGRQKI S+KWGFTK+ RDE+
Sbjct: 119 QGTCARVDIGQVLLSVRCKPNNAVHASEALRRAKFKFPGRQKIIESRKWGFTKFSRDEYV 178
Query: 587 KLREEGRLANDG 622
+L+ EGR+ DG
Sbjct: 179 RLKSEGRIMPDG 190
Score = 79.8 bits (188), Expect = 2e-15
Identities = 38/69 (55%), Positives = 46/69 (66%)
Frame = +3
Query: 114 VPDPKIRIFDLGKKRATVDDFPLCVHLVSDEYEQLSSEALEAGRICCNKYLAKELRKGSV 293
VPDPKIRI+D+G K+ VD+F CVHLVS E E ++SEALEA RI CNKY+ K K +
Sbjct: 22 VPDPKIRIYDVGMKKKGVDEFSHCVHLVSWEKENVTSEALEAARIACNKYMTKSAGKDAF 81
Query: 294 PYPHETSPF 320
PF
Sbjct: 82 HLRVRVHPF 90
Score = 41.9 bits (94), Expect = 4e-04
Identities = 18/28 (64%), Positives = 20/28 (71%)
Frame = +2
Query: 59 CYRYCKNKPYPKSRFCRGCT*SQDPYLR 142
CYR KNKPYPKSR+CRG DP +R
Sbjct: 4 CYRQIKNKPYPKSRYCRGV---PDPKIR 28
>03_02_0897 -
12239375-12239458,12240035-12240116,12240213-12240714,
12241150-12241303,12241458-12241629,12242237-12242443,
12242926-12243323
Length = 532
Score = 93.5 bits (222), Expect = 1e-19
Identities = 44/80 (55%), Positives = 54/80 (67%)
Frame = +2
Query: 413 TVXRVRIGQPIMSVRSSDRWKAQVIEALRRAKFKFPGRQKIYVSKKWGFTKYERDEFDKL 592
T RVRIGQ ++SVR D A EALRRAKFKFPGRQ++ S KWGFT+++RDE+ KL
Sbjct: 432 TCARVRIGQVLLSVRCRDANAAHAQEALRRAKFKFPGRQRVIFSAKWGFTRFKRDEYLKL 491
Query: 593 REEGRLANDGCIVXYRPEHG 652
+ EGR+ DG HG
Sbjct: 492 KSEGRIVPDGVNAKLLTRHG 511
Score = 90.6 bits (215), Expect = 9e-19
Identities = 41/57 (71%), Positives = 47/57 (82%)
Frame = +3
Query: 114 VPDPKIRIFDLGKKRATVDDFPLCVHLVSDEYEQLSSEALEAGRICCNKYLAKELRK 284
VPDPKIRIFD+G+K+ + DDFPLCVHLVS E E +SSEALEA RI CNKY+AK K
Sbjct: 333 VPDPKIRIFDVGQKKRSADDFPLCVHLVSWEKENVSSEALEAARIACNKYMAKHAGK 389
Score = 90.6 bits (215), Expect = 9e-19
Identities = 38/49 (77%), Positives = 43/49 (87%)
Frame = +1
Query: 271 KNCGKDQFHIRMRLHPFHVIRINKMLSCAGADRLQTGMRGAFGKPQGYC 417
K+ GKD FH+R+ HP+HV+RINKMLSCAGADRLQTGMRGAFGKP G C
Sbjct: 385 KHAGKDAFHLRVCAHPYHVLRINKMLSCAGADRLQTGMRGAFGKPTGTC 433
Score = 46.8 bits (106), Expect = 2e-05
Identities = 20/31 (64%), Positives = 22/31 (70%)
Frame = +2
Query: 50 PARCYRYCKNKPYPKSRFCRGCT*SQDPYLR 142
P RCYR KNKPYPKSR+CRG DP +R
Sbjct: 312 PVRCYRQIKNKPYPKSRYCRGV---PDPKIR 339
>10_08_0141 +
15159160-15159306,15159708-15159815,15159958-15160006,
15160067-15160182,15160358-15160399,15161026-15161442,
15162356-15162509,15162911-15162975,15163793-15163870,
15163951-15164061,15164227-15164271,15164677-15164850,
15165383-15166335,15166471-15166681,15167037-15167196,
15168786-15169174
Length = 1072
Score = 33.9 bits (74), Expect = 0.11
Identities = 21/49 (42%), Positives = 26/49 (53%), Gaps = 4/49 (8%)
Frame = +3
Query: 162 TVDDFPLC-VHLVSDEYEQLSSEALEAGRICCNKYLAKELR---KGSVP 296
T D P C +HL SD Y S E ++AG+ C L KEL +G VP
Sbjct: 587 TTDWNPRCDIHLKSDGYTNYSLETVQAGKQQCKAALQKELGLPVRGDVP 635
>07_03_1509 - 27246721-27247350
Length = 209
Score = 29.5 bits (63), Expect = 2.4
Identities = 18/48 (37%), Positives = 25/48 (52%), Gaps = 5/48 (10%)
Frame = +3
Query: 432 LDSPSCPCALVTGGRHRSSRL---CAVP--SSSSPDVKRSTYQRSGVS 560
L P PC RH RL +P +SSSP+++R+T R+G S
Sbjct: 132 LQPPLSPCLSAGRRRHHLPRLHDAALIPGITSSSPELRRNTVARAGFS 179
>07_03_1584 +
27907345-27907357,27907693-27908039,27908202-27908319,
27908653-27908705,27908808-27908978,27909447-27909643,
27909729-27909807,27909954-27909992,27910202-27910321,
27910417-27910518,27910654-27910737,27910832-27911074,
27911156-27911281,27911365-27911439,27911534-27911605,
27911807-27911926,27912075-27912172,27912643-27912802,
27912867-27912980,27913029-27913121,27913122-27913319,
27913404-27913497,27914032-27914192
Length = 958
Score = 29.1 bits (62), Expect = 3.2
Identities = 20/77 (25%), Positives = 34/77 (44%), Gaps = 7/77 (9%)
Frame = +1
Query: 223 QRLWRQDVSAAI-----STSLKNCGKDQFHIRMRLHPFHVIRINKMLSCAG--ADRLQTG 381
+ LWRQ+ + S+ + CG+D I +HP ++I++ + L G R+ +
Sbjct: 703 ENLWRQNALKTLPVLLNSSDMLACGEDLGLIPACVHPKYIIQVMQELGLIGLRIQRMPSE 762
Query: 382 MRGAFGKPQGYCXTCSH 432
FG P Y H
Sbjct: 763 PNLEFGIPSQYSYMTMH 779
>01_06_0212 + 27575406-27575604,27575723-27576241,27576371-27576387
Length = 244
Score = 29.1 bits (62), Expect = 3.2
Identities = 17/42 (40%), Positives = 24/42 (57%)
Frame = -3
Query: 529 LTSGELELGTAQSLDDLCLPPVTRAHGHDGLSNANTXYSSPE 404
L+SGEL +G + D+ LPPV G G S+A S+P+
Sbjct: 134 LSSGELLIGASSPYDEPPLPPVHSRRG-AGRSSAVPRLSAPD 174
>01_05_0379 + 21630223-21631188
Length = 321
Score = 29.1 bits (62), Expect = 3.2
Identities = 14/37 (37%), Positives = 19/37 (51%)
Frame = +3
Query: 369 APDWDAWCVWQASGLLXHVFALDSPSCPCALVTGGRH 479
AP ++ WC W ASG+ H +P A+ GG H
Sbjct: 83 APPYN-WCPWDASGVRGHPRDPRNPIRCIAICVGGSH 118
>12_02_0957 +
24807261-24807311,24807436-24807773,24808727-24808927,
24809024-24809069,24809284-24809600,24809949-24810072,
24810465-24810537,24810968-24811173,24811384-24811651,
24811780-24811877,24812116-24812379
Length = 661
Score = 28.3 bits (60), Expect = 5.6
Identities = 12/37 (32%), Positives = 19/37 (51%)
Frame = -3
Query: 277 SSLARYLLQQIRPASKASELSCSYSSDTKCTHSGKSS 167
S +R+ ++ P+ ELSC ++T C H G S
Sbjct: 82 SGSSRFKVRIFNPSGCEKELSCVMMNNTPCGHEGSMS 118
>12_02_0615 +
21242819-21243201,21244510-21244630,21244728-21244847,
21245015-21245245,21245365-21245862
Length = 450
Score = 28.3 bits (60), Expect = 5.6
Identities = 17/52 (32%), Positives = 25/52 (48%)
Frame = -3
Query: 241 PASKASELSCSYSSDTKCTHSGKSSTVALFLPKSKIRILGSGTAPTEPRFRI 86
P++ AS S S +CT+ GK ++V L + R+ G E FRI
Sbjct: 125 PSASASVFGVSAES-MQCTYDGKGNSVPTILLHMQERLYAQGGLKAEGIFRI 175
>10_08_0327 + 16797366-16800639,16800979-16801067,16801120-16801593
Length = 1278
Score = 27.9 bits (59), Expect = 7.5
Identities = 17/45 (37%), Positives = 23/45 (51%), Gaps = 5/45 (11%)
Frame = +3
Query: 57 DATGTAKINRIRNRGSVGAVPD-----PKIRIFDLGKKRATVDDF 176
D +G + R+ N VGA+P PK+ FDLG T +DF
Sbjct: 138 DLSGLVDL-RLYNNNLVGAIPHQLSRLPKVAHFDLGANYLTDEDF 181
>03_05_0827 + 28016157-28017575
Length = 472
Score = 27.9 bits (59), Expect = 7.5
Identities = 22/72 (30%), Positives = 33/72 (45%), Gaps = 2/72 (2%)
Frame = +3
Query: 396 WQASGLLXHVFALDSPS--CPCALVTGGRHRSSRLCAVPSSSSPDVKRSTYQRSGVSQSM 569
W + L+ H AL S PCA++ AV +SS+P + S QR + +SM
Sbjct: 122 WVLADLMHHWVALASQERGVPCAMILPCS------AAVVASSAPPTESSADQREAIVRSM 175
Query: 570 NVMSLTSCVKRA 605
+ + KRA
Sbjct: 176 GTAAPSFEAKRA 187
>03_02_0491 +
8854438-8854657,8854897-8854942,8855268-8855307,
8856025-8856090,8856237-8856318,8857036-8857595,
8857681-8857771,8858300-8858316
Length = 373
Score = 27.9 bits (59), Expect = 7.5
Identities = 17/70 (24%), Positives = 31/70 (44%)
Frame = -3
Query: 235 SKASELSCSYSSDTKCTHSGKSSTVALFLPKSKIRILGSGTAPTEPRFRIRFIFAVPVAS 56
++A EL + S S + +L LP +++ LG TA ++ P+A
Sbjct: 86 TRADELIVNVGSCNHFQISQEGPVSSLLLPLTEMEELGEHTATVAIDLQLISAVEAPLAK 145
Query: 55 RWPAPHGDLY 26
W +GD++
Sbjct: 146 GWGYGYGDIH 155
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,471,130
Number of Sequences: 37544
Number of extensions: 470578
Number of successful extensions: 1404
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 1348
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1404
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1632177336
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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