Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP02_F_N04
(654 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical pr... 163 1e-40
Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical pr... 163 1e-40
Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical pr... 163 1e-40
X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein. 163 1e-40
X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein. 163 1e-40
X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein. 163 1e-40
X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein. 163 1e-40
U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4... 163 1e-40
U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4... 163 1e-40
Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical pr... 161 4e-40
U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4... 161 4e-40
AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical... 114 4e-26
Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical pr... 101 4e-22
J01046-1|AAA27890.1| 86|Caenorhabditis elegans protein ( C.ele... 95 4e-20
J01043-1|AAA27888.1| 83|Caenorhabditis elegans protein ( C.ele... 95 4e-20
J01044-1|AAA27889.1| 86|Caenorhabditis elegans protein ( C.ele... 93 1e-19
J01042-1|AAA27887.1| 86|Caenorhabditis elegans protein ( C.ele... 93 1e-19
AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 comple... 78 6e-15
AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical ... 74 1e-13
U40799-8|AAA81487.1| 552|Caenorhabditis elegans Hypothetical pr... 38 0.006
Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical pr... 34 0.077
U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related p... 34 0.077
U80439-8|AAB37646.3| 1724|Caenorhabditis elegans Hypothetical pr... 32 0.41
Z72514-1|CAA96674.1| 428|Caenorhabditis elegans Hypothetical pr... 31 0.54
Z68301-5|CAA92620.1| 301|Caenorhabditis elegans Hypothetical pr... 31 0.94
V00148-1|CAA23464.1| 301|Caenorhabditis elegans protein ( Caeno... 31 0.94
J01048-1|AAA27990.1| 301|Caenorhabditis elegans protein ( C.ele... 31 0.94
AY347575-1|AAP97869.1| 301|Caenorhabditis elegans COLlagen stru... 31 0.94
AF022985-10|AAB69961.1| 325|Caenorhabditis elegans Collagen pro... 29 2.2
AC199170-9|ABO33267.1| 388|Caenorhabditis elegans Hypothetical ... 29 3.8
Z67990-1|CAA91932.1| 316|Caenorhabditis elegans Hypothetical pr... 28 5.0
U29614-2|AAM54190.1| 1020|Caenorhabditis elegans Temporarily ass... 28 5.0
U29614-1|AAM54191.1| 1061|Caenorhabditis elegans Temporarily ass... 28 5.0
AC084153-10|AAK84591.1| 184|Caenorhabditis elegans Hypothetical... 28 6.7
Z99773-3|CAE11316.1| 305|Caenorhabditis elegans Hypothetical pr... 27 8.8
AF022985-9|AAB69960.1| 314|Caenorhabditis elegans Collagen prot... 27 8.8
>Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.6 protein.
Length = 376
Score = 163 bits (395), Expect = 1e-40
Identities = 72/74 (97%), Positives = 73/74 (98%)
Frame = +1
Query: 199 VMVGMGXKDSYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHP 378
VMVGMG KDSYVGDEAQSKRGILTLKYPIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHP
Sbjct: 44 VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHP 103
Query: 379 VLLTEAPLNPKANR 420
VLLTEAPLNPKANR
Sbjct: 104 VLLTEAPLNPKANR 117
Score = 151 bits (366), Expect = 4e-37
Identities = 71/77 (92%), Positives = 75/77 (97%)
Frame = +2
Query: 422 QKMTXIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAIL 601
+KMT IMFETFN+PAMYVAIQAVLSLYASGRTTG+VLDSGDGV+HTVPIYEGYALPHAIL
Sbjct: 118 EKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHTVPIYEGYALPHAIL 177
Query: 602 RLDLAGRDLTDYLMXIL 652
RLDLAGRDLTDYLM IL
Sbjct: 178 RLDLAGRDLTDYLMKIL 194
Score = 93.5 bits (222), Expect = 1e-19
Identities = 41/42 (97%), Positives = 42/42 (100%)
Frame = +3
Query: 69 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQ 194
MCDD+VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQ 42
>Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.5 protein.
Length = 376
Score = 163 bits (395), Expect = 1e-40
Identities = 72/74 (97%), Positives = 73/74 (98%)
Frame = +1
Query: 199 VMVGMGXKDSYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHP 378
VMVGMG KDSYVGDEAQSKRGILTLKYPIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHP
Sbjct: 44 VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHP 103
Query: 379 VLLTEAPLNPKANR 420
VLLTEAPLNPKANR
Sbjct: 104 VLLTEAPLNPKANR 117
Score = 151 bits (367), Expect = 3e-37
Identities = 72/77 (93%), Positives = 75/77 (97%)
Frame = +2
Query: 422 QKMTXIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAIL 601
+KMT IMFETFN+PAMYVAIQAVLSLYASGRTTGIVLDSGDGV+HTVPIYEGYALPHAIL
Sbjct: 118 EKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAIL 177
Query: 602 RLDLAGRDLTDYLMXIL 652
RLDLAGRDLTDYLM IL
Sbjct: 178 RLDLAGRDLTDYLMKIL 194
Score = 95.1 bits (226), Expect = 4e-20
Identities = 42/42 (100%), Positives = 42/42 (100%)
Frame = +3
Query: 69 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQ 194
MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQ
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQ 42
>Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.4 protein.
Length = 376
Score = 163 bits (395), Expect = 1e-40
Identities = 72/74 (97%), Positives = 73/74 (98%)
Frame = +1
Query: 199 VMVGMGXKDSYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHP 378
VMVGMG KDSYVGDEAQSKRGILTLKYPIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHP
Sbjct: 44 VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHP 103
Query: 379 VLLTEAPLNPKANR 420
VLLTEAPLNPKANR
Sbjct: 104 VLLTEAPLNPKANR 117
Score = 151 bits (366), Expect = 4e-37
Identities = 71/77 (92%), Positives = 75/77 (97%)
Frame = +2
Query: 422 QKMTXIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAIL 601
+KMT IMFETFN+PAMYVAIQAVLSLYASGRTTG+VLDSGDGV+HTVPIYEGYALPHAIL
Sbjct: 118 EKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHTVPIYEGYALPHAIL 177
Query: 602 RLDLAGRDLTDYLMXIL 652
RLDLAGRDLTDYLM IL
Sbjct: 178 RLDLAGRDLTDYLMKIL 194
Score = 93.5 bits (222), Expect = 1e-19
Identities = 41/42 (97%), Positives = 42/42 (100%)
Frame = +3
Query: 69 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQ 194
MCDD+VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQ 42
>X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 163 bits (395), Expect = 1e-40
Identities = 72/74 (97%), Positives = 73/74 (98%)
Frame = +1
Query: 199 VMVGMGXKDSYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHP 378
VMVGMG KDSYVGDEAQSKRGILTLKYPIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHP
Sbjct: 44 VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHP 103
Query: 379 VLLTEAPLNPKANR 420
VLLTEAPLNPKANR
Sbjct: 104 VLLTEAPLNPKANR 117
Score = 151 bits (366), Expect = 4e-37
Identities = 71/77 (92%), Positives = 75/77 (97%)
Frame = +2
Query: 422 QKMTXIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAIL 601
+KMT IMFETFN+PAMYVAIQAVLSLYASGRTTG+VLDSGDGV+HTVPIYEGYALPHAIL
Sbjct: 118 EKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHTVPIYEGYALPHAIL 177
Query: 602 RLDLAGRDLTDYLMXIL 652
RLDLAGRDLTDYLM IL
Sbjct: 178 RLDLAGRDLTDYLMKIL 194
Score = 93.5 bits (222), Expect = 1e-19
Identities = 41/42 (97%), Positives = 42/42 (100%)
Frame = +3
Query: 69 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQ 194
MCDD+VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQ 42
>X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein.
Length = 375
Score = 163 bits (395), Expect = 1e-40
Identities = 72/74 (97%), Positives = 73/74 (98%)
Frame = +1
Query: 199 VMVGMGXKDSYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHP 378
VMVGMG KDSYVGDEAQSKRGILTLKYPIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHP
Sbjct: 44 VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHP 103
Query: 379 VLLTEAPLNPKANR 420
VLLTEAPLNPKANR
Sbjct: 104 VLLTEAPLNPKANR 117
Score = 151 bits (366), Expect = 4e-37
Identities = 71/77 (92%), Positives = 75/77 (97%)
Frame = +2
Query: 422 QKMTXIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAIL 601
+KMT IMFETFN+PAMYVAIQAVLSLYASGRTTG+VLDSGDGV+HTVPIYEGYALPHAIL
Sbjct: 118 EKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHTVPIYEGYALPHAIL 177
Query: 602 RLDLAGRDLTDYLMXIL 652
RLDLAGRDLTDYLM IL
Sbjct: 178 RLDLAGRDLTDYLMKIL 194
Score = 93.5 bits (222), Expect = 1e-19
Identities = 41/42 (97%), Positives = 42/42 (100%)
Frame = +3
Query: 69 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQ 194
MCDD+VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQ 42
>X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 163 bits (395), Expect = 1e-40
Identities = 72/74 (97%), Positives = 73/74 (98%)
Frame = +1
Query: 199 VMVGMGXKDSYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHP 378
VMVGMG KDSYVGDEAQSKRGILTLKYPIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHP
Sbjct: 44 VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHP 103
Query: 379 VLLTEAPLNPKANR 420
VLLTEAPLNPKANR
Sbjct: 104 VLLTEAPLNPKANR 117
Score = 151 bits (367), Expect = 3e-37
Identities = 72/77 (93%), Positives = 75/77 (97%)
Frame = +2
Query: 422 QKMTXIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAIL 601
+KMT IMFETFN+PAMYVAIQAVLSLYASGRTTGIVLDSGDGV+HTVPIYEGYALPHAIL
Sbjct: 118 EKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAIL 177
Query: 602 RLDLAGRDLTDYLMXIL 652
RLDLAGRDLTDYLM IL
Sbjct: 178 RLDLAGRDLTDYLMKIL 194
Score = 93.5 bits (222), Expect = 1e-19
Identities = 40/42 (95%), Positives = 42/42 (100%)
Frame = +3
Query: 69 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQ 194
MCDDDVAAL++DNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQ
Sbjct: 1 MCDDDVAALILDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQ 42
>X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 163 bits (395), Expect = 1e-40
Identities = 72/74 (97%), Positives = 73/74 (98%)
Frame = +1
Query: 199 VMVGMGXKDSYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHP 378
VMVGMG KDSYVGDEAQSKRGILTLKYPIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHP
Sbjct: 44 VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHP 103
Query: 379 VLLTEAPLNPKANR 420
VLLTEAPLNPKANR
Sbjct: 104 VLLTEAPLNPKANR 117
Score = 151 bits (366), Expect = 4e-37
Identities = 71/77 (92%), Positives = 75/77 (97%)
Frame = +2
Query: 422 QKMTXIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAIL 601
+KMT IMFETFN+PAMYVAIQAVLSLYASGRTTG+VLDSGDGV+HTVPIYEGYALPHAIL
Sbjct: 118 EKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHTVPIYEGYALPHAIL 177
Query: 602 RLDLAGRDLTDYLMXIL 652
RLDLAGRDLTDYLM IL
Sbjct: 178 RLDLAGRDLTDYLMKIL 194
Score = 93.5 bits (222), Expect = 1e-19
Identities = 41/42 (97%), Positives = 42/42 (100%)
Frame = +3
Query: 69 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQ 194
MCDD+VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQ 42
>U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4,
isoform c protein.
Length = 362
Score = 163 bits (395), Expect = 1e-40
Identities = 72/74 (97%), Positives = 73/74 (98%)
Frame = +1
Query: 199 VMVGMGXKDSYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHP 378
VMVGMG KDSYVGDEAQSKRGILTLKYPIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHP
Sbjct: 30 VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHP 89
Query: 379 VLLTEAPLNPKANR 420
VLLTEAPLNPKANR
Sbjct: 90 VLLTEAPLNPKANR 103
Score = 151 bits (366), Expect = 4e-37
Identities = 71/77 (92%), Positives = 75/77 (97%)
Frame = +2
Query: 422 QKMTXIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAIL 601
+KMT IMFETFN+PAMYVAIQAVLSLYASGRTTG+VLDSGDGV+HTVPIYEGYALPHAIL
Sbjct: 104 EKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHTVPIYEGYALPHAIL 163
Query: 602 RLDLAGRDLTDYLMXIL 652
RLDLAGRDLTDYLM IL
Sbjct: 164 RLDLAGRDLTDYLMKIL 180
Score = 54.4 bits (125), Expect = 7e-08
Identities = 23/24 (95%), Positives = 24/24 (100%)
Frame = +3
Query: 123 KAGFAGDDAPRAVFPSIVGRPRHQ 194
+AGFAGDDAPRAVFPSIVGRPRHQ
Sbjct: 5 RAGFAGDDAPRAVFPSIVGRPRHQ 28
>U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4,
isoform a protein.
Length = 376
Score = 163 bits (395), Expect = 1e-40
Identities = 72/74 (97%), Positives = 73/74 (98%)
Frame = +1
Query: 199 VMVGMGXKDSYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHP 378
VMVGMG KDSYVGDEAQSKRGILTLKYPIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHP
Sbjct: 44 VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHP 103
Query: 379 VLLTEAPLNPKANR 420
VLLTEAPLNPKANR
Sbjct: 104 VLLTEAPLNPKANR 117
Score = 151 bits (366), Expect = 4e-37
Identities = 71/77 (92%), Positives = 75/77 (97%)
Frame = +2
Query: 422 QKMTXIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAIL 601
+KMT IMFETFN+PAMYVAIQAVLSLYASGRTTG+VLDSGDGV+HTVPIYEGYALPHAIL
Sbjct: 118 EKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHTVPIYEGYALPHAIL 177
Query: 602 RLDLAGRDLTDYLMXIL 652
RLDLAGRDLTDYLM IL
Sbjct: 178 RLDLAGRDLTDYLMKIL 194
Score = 93.5 bits (222), Expect = 1e-19
Identities = 41/42 (97%), Positives = 42/42 (100%)
Frame = +3
Query: 69 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQ 194
MCDD+VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQ 42
>Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical
protein T25C8.2 protein.
Length = 375
Score = 161 bits (391), Expect = 4e-40
Identities = 70/74 (94%), Positives = 73/74 (98%)
Frame = +1
Query: 199 VMVGMGXKDSYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHP 378
VMVGMG KDSYVGDEAQSKRGILTLKYPIEHGI+TNWDDMEKIWHHTFYNELR+APEEHP
Sbjct: 43 VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRIAPEEHP 102
Query: 379 VLLTEAPLNPKANR 420
VLLTEAPLNPK+NR
Sbjct: 103 VLLTEAPLNPKSNR 116
Score = 144 bits (350), Expect = 4e-35
Identities = 68/77 (88%), Positives = 73/77 (94%)
Frame = +2
Query: 422 QKMTXIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAIL 601
+KMT IMFETFN+PAMYV IQAVLSLYASGRTTGIVLD+GDGV+HTVPIYEGYALPHAI
Sbjct: 117 EKMTQIMFETFNTPAMYVNIQAVLSLYASGRTTGIVLDTGDGVTHTVPIYEGYALPHAIQ 176
Query: 602 RLDLAGRDLTDYLMXIL 652
RLDLAGRDLTDY+M IL
Sbjct: 177 RLDLAGRDLTDYMMKIL 193
Score = 84.2 bits (199), Expect = 7e-17
Identities = 36/40 (90%), Positives = 40/40 (100%)
Frame = +3
Query: 75 DDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQ 194
++++AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQ
Sbjct: 2 EEEIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQ 41
>U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4,
isoform b protein.
Length = 332
Score = 161 bits (391), Expect = 4e-40
Identities = 71/73 (97%), Positives = 72/73 (98%)
Frame = +1
Query: 202 MVGMGXKDSYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPV 381
MVGMG KDSYVGDEAQSKRGILTLKYPIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHPV
Sbjct: 1 MVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPV 60
Query: 382 LLTEAPLNPKANR 420
LLTEAPLNPKANR
Sbjct: 61 LLTEAPLNPKANR 73
Score = 151 bits (366), Expect = 4e-37
Identities = 71/77 (92%), Positives = 75/77 (97%)
Frame = +2
Query: 422 QKMTXIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAIL 601
+KMT IMFETFN+PAMYVAIQAVLSLYASGRTTG+VLDSGDGV+HTVPIYEGYALPHAIL
Sbjct: 74 EKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHTVPIYEGYALPHAIL 133
Query: 602 RLDLAGRDLTDYLMXIL 652
RLDLAGRDLTDYLM IL
Sbjct: 134 RLDLAGRDLTDYLMKIL 150
>AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical
protein Y53F4B.22 protein.
Length = 374
Score = 114 bits (275), Expect = 4e-26
Identities = 50/77 (64%), Positives = 65/77 (84%)
Frame = +2
Query: 422 QKMTXIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAIL 601
++ I FETFN PA+Y+ +QAVLSLYA+GRTTG+VLDSGDGV+H VPI +G+A+ HAI
Sbjct: 121 ERSAEIFFETFNVPALYIQMQAVLSLYATGRTTGVVLDSGDGVTHAVPIVKGFAMKHAIQ 180
Query: 602 RLDLAGRDLTDYLMXIL 652
R+DLAGRD+T+YL +L
Sbjct: 181 RMDLAGRDVTEYLRVLL 197
Score = 98.3 bits (234), Expect = 4e-21
Identities = 41/75 (54%), Positives = 57/75 (76%), Gaps = 1/75 (1%)
Frame = +1
Query: 199 VMVGMGXKDSYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHTF-YNELRVAPEEH 375
VM G D ++G +A+S RG+ +++YP+EHGI+ NW DMEKIW + F ++L++ PEEH
Sbjct: 46 VMAGGLDGDIFIGPKAESNRGLFSIEYPMEHGIVNNWSDMEKIWEYIFGQDQLKIFPEEH 105
Query: 376 PVLLTEAPLNPKANR 420
PVLLT+APLNP NR
Sbjct: 106 PVLLTDAPLNPLKNR 120
Score = 47.2 bits (107), Expect = 1e-05
Identities = 22/42 (52%), Positives = 30/42 (71%), Gaps = 3/42 (7%)
Frame = +3
Query: 75 DDDVAA---LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRH 191
D DV A +V+DNGSG+ KAGFAG+ P+ F + VGRP++
Sbjct: 2 DYDVIANQPVVIDNGSGVIKAGFAGEQQPKVRFANFVGRPKY 43
>Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical
protein K07C5.1 protein.
Length = 395
Score = 101 bits (242), Expect = 4e-22
Identities = 44/77 (57%), Positives = 60/77 (77%)
Frame = +2
Query: 422 QKMTXIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAIL 601
+KM +MFE + ++YVA+QAVL+LYA G TG+V+DSGDGV+H P+YEG+AL H
Sbjct: 121 EKMFQVMFEQYGFNSIYVAVQAVLTLYAQGLLTGVVVDSGDGVTHICPVYEGFALHHLTR 180
Query: 602 RLDLAGRDLTDYLMXIL 652
RLD+AGRD+T YL+ +L
Sbjct: 181 RLDIAGRDITKYLIKLL 197
Score = 78.2 bits (184), Expect = 5e-15
Identities = 41/96 (42%), Positives = 58/96 (60%), Gaps = 1/96 (1%)
Frame = +1
Query: 136 PATTRPAPSSRPSWVALATRXVMVGMGXKDSYVGDEAQSKRGILTLKYPIEHGIITNWDD 315
PA P+ RP + +T+ V + KD VG+E R +L + YP+++GI+ NWDD
Sbjct: 28 PAHIFPSMVGRP--IVRSTQRVG-NIEIKDLMVGEECSQLRQMLDINYPMDNGIVRNWDD 84
Query: 316 MEKIWHHTFYNE-LRVAPEEHPVLLTEAPLNPKANR 420
M +W HTF E L + P+E +LLTE PLNP +NR
Sbjct: 85 MAHVWDHTFGPEKLDIDPKECKLLLTEPPLNPNSNR 120
Score = 45.6 bits (103), Expect = 3e-05
Identities = 18/31 (58%), Positives = 24/31 (77%)
Frame = +3
Query: 93 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP 185
+VVDNG+G K G+AG + P +FPS+VGRP
Sbjct: 9 IVVDNGTGFVKCGYAGTNFPAHIFPSMVGRP 39
>J01046-1|AAA27890.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene IV, 5' end. ).
Length = 86
Score = 95.1 bits (226), Expect = 4e-20
Identities = 42/42 (100%), Positives = 42/42 (100%)
Frame = +3
Query: 69 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQ 194
MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQ
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQ 42
Score = 92.7 bits (220), Expect = 2e-19
Identities = 41/43 (95%), Positives = 42/43 (97%)
Frame = +1
Query: 199 VMVGMGXKDSYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKI 327
VMVGMG KDSYVGDEAQSKRGILTLKYPIEHGI+TNWDDMEKI
Sbjct: 44 VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKI 86
>J01043-1|AAA27888.1| 83|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene II, 5' end. ).
Length = 83
Score = 95.1 bits (226), Expect = 4e-20
Identities = 42/42 (100%), Positives = 42/42 (100%)
Frame = +3
Query: 69 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQ 194
MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQ
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQ 42
Score = 87.0 bits (206), Expect = 1e-17
Identities = 38/40 (95%), Positives = 39/40 (97%)
Frame = +1
Query: 199 VMVGMGXKDSYVGDEAQSKRGILTLKYPIEHGIITNWDDM 318
VMVGMG KDSYVGDEAQSKRGILTLKYPIEHGI+TNWDDM
Sbjct: 44 VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDM 83
>J01044-1|AAA27889.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene III, 5' end. ).
Length = 86
Score = 93.5 bits (222), Expect = 1e-19
Identities = 41/42 (97%), Positives = 42/42 (100%)
Frame = +3
Query: 69 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQ 194
MCDD+VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQ 42
Score = 92.7 bits (220), Expect = 2e-19
Identities = 41/43 (95%), Positives = 42/43 (97%)
Frame = +1
Query: 199 VMVGMGXKDSYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKI 327
VMVGMG KDSYVGDEAQSKRGILTLKYPIEHGI+TNWDDMEKI
Sbjct: 44 VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKI 86
>J01042-1|AAA27887.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene I, 5' end. ).
Length = 86
Score = 93.5 bits (222), Expect = 1e-19
Identities = 41/42 (97%), Positives = 42/42 (100%)
Frame = +3
Query: 69 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQ 194
MCDD+VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQ 42
Score = 92.7 bits (220), Expect = 2e-19
Identities = 41/43 (95%), Positives = 42/43 (97%)
Frame = +1
Query: 199 VMVGMGXKDSYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKI 327
VMVGMG KDSYVGDEAQSKRGILTLKYPIEHGI+TNWDDMEKI
Sbjct: 44 VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKI 86
>AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 complex
component protein 1 protein.
Length = 425
Score = 77.8 bits (183), Expect = 6e-15
Identities = 36/80 (45%), Positives = 55/80 (68%), Gaps = 8/80 (10%)
Frame = +2
Query: 437 IMFETFNSPAMYVAIQAVLSLYASGRT--------TGIVLDSGDGVSHTVPIYEGYALPH 592
IMFE+FN P +Y+A+QAVL+L AS + TG+V+DSGDGV+H +P+ +GY +
Sbjct: 136 IMFESFNVPGLYIAVQAVLALTASWNSREANERSLTGLVIDSGDGVTHCIPVADGYVIGS 195
Query: 593 AILRLDLAGRDLTDYLMXIL 652
I + +AGRD+T ++ +L
Sbjct: 196 CIKHIPIAGRDITYFIQSLL 215
Score = 74.1 bits (174), Expect = 8e-14
Identities = 35/75 (46%), Positives = 44/75 (58%), Gaps = 1/75 (1%)
Frame = +1
Query: 199 VMVGMGXKDSYVGDEAQSKRGI-LTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEH 375
V G+ D ++GDEA S T+KYPI HGI+ +WD ME+ W + LR PE+H
Sbjct: 56 VGAGIDDLDFFIGDEALSPAATNYTVKYPIRHGIVEDWDLMERYWEQCIFKYLRAEPEDH 115
Query: 376 PVLLTEAPLNPKANR 420
LLTE PLN NR
Sbjct: 116 FFLLTEPPLNTPENR 130
Score = 35.5 bits (78), Expect = 0.033
Identities = 14/36 (38%), Positives = 22/36 (61%)
Frame = +3
Query: 69 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIV 176
M + A V+DNG+G K G+AG+ P+ + PS +
Sbjct: 1 MSAHQLPACVIDNGTGYTKLGYAGNTEPQFIIPSAI 36
>AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical
protein ZK616.4 protein.
Length = 436
Score = 73.7 bits (173), Expect = 1e-13
Identities = 32/77 (41%), Positives = 52/77 (67%)
Frame = +2
Query: 422 QKMTXIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAIL 601
+K+T IMFE F PA Y++ VLS +A GRT G+++DSG + VP+++GYA+ HA++
Sbjct: 140 EKLTEIMFEKFQVPAYYLSKNVVLSCFAQGRTHGLMVDSGATQTSVVPVFDGYAVTHAVV 199
Query: 602 RLDLAGRDLTDYLMXIL 652
+ + G +T+ L +L
Sbjct: 200 KCPIGGDLITEQLAQML 216
Score = 44.4 bits (100), Expect = 7e-05
Identities = 19/46 (41%), Positives = 29/46 (63%)
Frame = +1
Query: 283 IEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANR 420
++ G+I +W+ EKI H++ N L P EHPVL +E+ N +A R
Sbjct: 94 MKEGLIEDWELFEKIVEHSYENILYSNPSEHPVLFSESSWNDRARR 139
Score = 33.9 bits (74), Expect = 0.10
Identities = 14/33 (42%), Positives = 21/33 (63%)
Frame = +3
Query: 78 DDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIV 176
D+V+ LV D GS + GFAG++ P+ PS +
Sbjct: 9 DEVSGLVFDAGSQSFRVGFAGEEYPKGDIPSYI 41
>U40799-8|AAA81487.1| 552|Caenorhabditis elegans Hypothetical
protein F42C5.9 protein.
Length = 552
Score = 37.9 bits (84), Expect = 0.006
Identities = 22/72 (30%), Positives = 36/72 (50%)
Frame = +2
Query: 425 KMTXIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILR 604
++ I E + + Q L LYA TTG+V+D G+ V + VP+ +GY + AI
Sbjct: 291 ELLQICLEDIKFQSAGITRQPSLILYAYDVTTGVVVDIGERV-NIVPVIDGYVVESAICS 349
Query: 605 LDLAGRDLTDYL 640
+ + + D L
Sbjct: 350 IPYGSQQMGDSL 361
>Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical
protein C08B11.6 protein.
Length = 418
Score = 34.3 bits (75), Expect = 0.077
Identities = 13/35 (37%), Positives = 20/35 (57%)
Frame = +1
Query: 238 DEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHTF 342
+E K + ++ PIE G + NWD ++IW TF
Sbjct: 49 EECSDKFSLFYVR-PIERGYVVNWDTQQQIWEKTF 82
>U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related
protein-like protein.
Length = 418
Score = 34.3 bits (75), Expect = 0.077
Identities = 13/35 (37%), Positives = 20/35 (57%)
Frame = +1
Query: 238 DEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHTF 342
+E K + ++ PIE G + NWD ++IW TF
Sbjct: 49 EECSDKFSLFYVR-PIERGYVVNWDTQQQIWEKTF 82
>U80439-8|AAB37646.3| 1724|Caenorhabditis elegans Hypothetical
protein C01G8.9a protein.
Length = 1724
Score = 31.9 bits (69), Expect = 0.41
Identities = 14/32 (43%), Positives = 19/32 (59%)
Frame = -1
Query: 549 TPSPESSTIPVVRPEAYSESTAWMATYMAGEL 454
TP P SST+PVV P ++ T +Y+A L
Sbjct: 865 TPQPLSSTMPVVAPSTSTQPTPTTGSYLANTL 896
>Z72514-1|CAA96674.1| 428|Caenorhabditis elegans Hypothetical
protein T10B10.1 protein.
Length = 428
Score = 31.5 bits (68), Expect = 0.54
Identities = 13/24 (54%), Positives = 16/24 (66%)
Frame = +1
Query: 100 STMAPACARPVSPATTRPAPSSRP 171
+T AP PATTRPAP+S+P
Sbjct: 317 ATRAPPATTRAPPATTRPAPASQP 340
>Z68301-5|CAA92620.1| 301|Caenorhabditis elegans Hypothetical
protein W01B6.7 protein.
Length = 301
Score = 30.7 bits (66), Expect = 0.94
Identities = 16/45 (35%), Positives = 21/45 (46%)
Frame = -3
Query: 247 GPRHPRRSLXGPYRPSRPWWRGRPTMDGKTARGASSPAKPALHMP 113
GP P S P +P +P G P G +GAS+P +P P
Sbjct: 105 GPPGPGGSPGKPGKPGKP---GAPGAPGNPGKGASAPCEPVTQPP 146
>V00148-1|CAA23464.1| 301|Caenorhabditis elegans protein (
Caenorhabditis elegansgene Col-2 coding for a collagen.
).
Length = 301
Score = 30.7 bits (66), Expect = 0.94
Identities = 16/45 (35%), Positives = 21/45 (46%)
Frame = -3
Query: 247 GPRHPRRSLXGPYRPSRPWWRGRPTMDGKTARGASSPAKPALHMP 113
GP P S P +P +P G P G +GAS+P +P P
Sbjct: 105 GPPGPGGSPGKPGKPGKP---GAPGAPGNPGKGASAPCEPVTQPP 146
>J01048-1|AAA27990.1| 301|Caenorhabditis elegans protein (
C.elegans (nematode)collagen 2 (col-2) gene, complete
cds. ).
Length = 301
Score = 30.7 bits (66), Expect = 0.94
Identities = 16/45 (35%), Positives = 21/45 (46%)
Frame = -3
Query: 247 GPRHPRRSLXGPYRPSRPWWRGRPTMDGKTARGASSPAKPALHMP 113
GP P S P +P +P G P G +GAS+P +P P
Sbjct: 105 GPPGPGGSPGKPGKPGKP---GAPGAPGNPGKGASAPCEPVTQPP 146
>AY347575-1|AAP97869.1| 301|Caenorhabditis elegans COLlagen
structural gene, probabledorsal and ventral cuticle
component, from embryo to adult,but maximal in dauer
(28.0 kD) (col-2) protein.
Length = 301
Score = 30.7 bits (66), Expect = 0.94
Identities = 16/45 (35%), Positives = 21/45 (46%)
Frame = -3
Query: 247 GPRHPRRSLXGPYRPSRPWWRGRPTMDGKTARGASSPAKPALHMP 113
GP P S P +P +P G P G +GAS+P +P P
Sbjct: 105 GPPGPGGSPGKPGKPGKP---GAPGAPGNPGKGASAPCEPVTQPP 146
>AF022985-10|AAB69961.1| 325|Caenorhabditis elegans Collagen
protein 142 protein.
Length = 325
Score = 29.5 bits (63), Expect = 2.2
Identities = 13/38 (34%), Positives = 17/38 (44%)
Frame = -3
Query: 247 GPRHPRRSLXGPYRPSRPWWRGRPTMDGKTARGASSPA 134
GPR P P +P P G P G+ +RG P+
Sbjct: 170 GPRGPAGDAGSPGQPGHPGSPGNPGRGGQRSRGLPGPS 207
>AC199170-9|ABO33267.1| 388|Caenorhabditis elegans Hypothetical
protein T08D2.8 protein.
Length = 388
Score = 28.7 bits (61), Expect = 3.8
Identities = 19/53 (35%), Positives = 26/53 (49%)
Frame = +1
Query: 37 VPNTNTHKVQRCATTMLLRL*STMAPACARPVSPATTRPAPSSRPSWVALATR 195
+ +++T + A RL S +AP A P S A TR APS + VA R
Sbjct: 213 IGSSSTSAPPKTAAGAPKRLSSAVAPRRAPPASAAPTRRAPSPKAPVVAPTRR 265
>Z67990-1|CAA91932.1| 316|Caenorhabditis elegans Hypothetical
protein F02D10.1 protein.
Length = 316
Score = 28.3 bits (60), Expect = 5.0
Identities = 15/51 (29%), Positives = 22/51 (43%)
Frame = -3
Query: 265 GYLSCSGPRHPRRSLXGPYRPSRPWWRGRPTMDGKTARGASSPAKPALHMP 113
G C P P P +P P G P G + +GA++P +P+ P
Sbjct: 112 GCTGCCNPGPPGPG-GRPGKPGTPGKPGAPGNPGASGKGAAAPCEPSTPPP 161
>U29614-2|AAM54190.1| 1020|Caenorhabditis elegans Temporarily
assigned gene nameprotein 279, isoform a protein.
Length = 1020
Score = 28.3 bits (60), Expect = 5.0
Identities = 24/95 (25%), Positives = 42/95 (44%)
Frame = -1
Query: 549 TPSPESSTIPVVRPEAYSESTAWMATYMAGELKVSNMXWVIFCPVGLGVEGGFGEQHGVL 370
T SP+SST R + A + A +L+ SN + CP +G E L
Sbjct: 72 TVSPKSSTDQNCRSTNEAIRIAGFDNF-ADQLQESNGVFEA-CPEAHSEQGNESEDFKDL 129
Query: 369 LGGDTQLIVEGVVPDLLHVIPVGDDTVLDGVLQSE 265
+ +T+ +E VV +HV ++ + V+ ++
Sbjct: 130 INSETECNIEDVVLPTVHVSTDSEEIISGDVIMND 164
>U29614-1|AAM54191.1| 1061|Caenorhabditis elegans Temporarily
assigned gene nameprotein 279, isoform b protein.
Length = 1061
Score = 28.3 bits (60), Expect = 5.0
Identities = 24/95 (25%), Positives = 42/95 (44%)
Frame = -1
Query: 549 TPSPESSTIPVVRPEAYSESTAWMATYMAGELKVSNMXWVIFCPVGLGVEGGFGEQHGVL 370
T SP+SST R + A + A +L+ SN + CP +G E L
Sbjct: 113 TVSPKSSTDQNCRSTNEAIRIAGFDNF-ADQLQESNGVFEA-CPEAHSEQGNESEDFKDL 170
Query: 369 LGGDTQLIVEGVVPDLLHVIPVGDDTVLDGVLQSE 265
+ +T+ +E VV +HV ++ + V+ ++
Sbjct: 171 INSETECNIEDVVLPTVHVSTDSEEIISGDVIMND 205
>AC084153-10|AAK84591.1| 184|Caenorhabditis elegans Hypothetical
protein Y22D7AL.2 protein.
Length = 184
Score = 27.9 bits (59), Expect = 6.7
Identities = 17/47 (36%), Positives = 19/47 (40%), Gaps = 1/47 (2%)
Frame = +1
Query: 10 SRCRRVNTSVPNTNTHKVQ-RCATTMLLRL*STMAPACARPVSPATT 147
S C N S + N H CA T LL T P RP+ TT
Sbjct: 127 SNCGTPNVSAASKNNHLFTLHCAHTKLLVSRQTAEPRTCRPLPKTTT 173
>Z99773-3|CAE11316.1| 305|Caenorhabditis elegans Hypothetical
protein H06A10.2 protein.
Length = 305
Score = 27.5 bits (58), Expect = 8.8
Identities = 14/45 (31%), Positives = 19/45 (42%)
Frame = -3
Query: 265 GYLSCSGPRHPRRSLXGPYRPSRPWWRGRPTMDGKTARGASSPAK 131
G C P P P +P +P G P G +GAS+P +
Sbjct: 102 GCTGCCNPGPPGPG-GSPGKPGKPGKPGAPGAPGAAGKGASAPCE 145
>AF022985-9|AAB69960.1| 314|Caenorhabditis elegans Collagen protein
141 protein.
Length = 314
Score = 27.5 bits (58), Expect = 8.8
Identities = 12/39 (30%), Positives = 17/39 (43%)
Frame = -3
Query: 250 SGPRHPRRSLXGPYRPSRPWWRGRPTMDGKTARGASSPA 134
+GP P P +P P G P G+ +RG P+
Sbjct: 176 AGPTGPTGDAGAPGQPGHPGSPGNPGRGGQRSRGLPGPS 214
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,793,373
Number of Sequences: 27780
Number of extensions: 276032
Number of successful extensions: 1255
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 1087
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1242
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1455289764
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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