Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP02_F_M24
(654 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X68836-1|CAA48726.1| 395|Homo sapiens S-adenosylmethionine synt... 186 8e-47
DQ083239-1|AAY85355.1| 395|Homo sapiens methionine adenosyltran... 186 8e-47
BC001854-1|AAH01854.1| 395|Homo sapiens methionine adenosyltran... 186 8e-47
BC001686-1|AAH01686.1| 395|Homo sapiens methionine adenosyltran... 186 8e-47
AC016753-1|AAY24339.1| 395|Homo sapiens unknown protein. 186 8e-47
X69078-1|CAA48822.1| 395|Homo sapiens methionine adenosyltransf... 179 7e-45
D49357-1|BAA08355.1| 395|Homo sapiens S-adenosylmethionine synt... 179 7e-45
BC018359-1|AAH18359.1| 395|Homo sapiens methionine adenosyltran... 179 7e-45
AL359195-2|CAI13695.1| 395|Homo sapiens methionine adenosyltran... 179 7e-45
AL359195-3|CAI13696.1| 145|Homo sapiens methionine adenosyltran... 89 1e-17
AL583807-2|CAH69984.3| 1575|Homo sapiens laminin, gamma 3 protein. 30 6.3
AL583807-1|CAH69983.1| 1587|Homo sapiens laminin, gamma 3 protein. 30 6.3
AL355872-3|CAI39529.1| 1587|Homo sapiens laminin, gamma 3 protein. 30 6.3
AL355872-2|CAI39530.2| 1619|Homo sapiens laminin, gamma 3 protein. 30 6.3
AK075536-1|BAC11679.1| 529|Homo sapiens protein ( Homo sapiens ... 30 6.3
AF041835-1|AAD36991.1| 1587|Homo sapiens laminin gamma 3 chain p... 30 6.3
>X68836-1|CAA48726.1| 395|Homo sapiens S-adenosylmethionine
synthetase protein.
Length = 395
Score = 186 bits (452), Expect = 8e-47
Identities = 83/107 (77%), Positives = 97/107 (90%)
Frame = +2
Query: 143 DKMCDQISDAILXAHLNQDPDAKVACETITKTGMVLLCGEITSKANVDYQKVVRETVKHI 322
DK+CDQISDA+L AHL QDPDAKVACET+ KTGM+LL GEITS+A VDYQKVVRE VKHI
Sbjct: 31 DKICDQISDAVLDAHLQQDPDAKVACETVAKTGMILLAGEITSRAAVDYQKVVREAVKHI 90
Query: 323 GYDDSSKGFDYKTCSVMLALDQQSPNIAAGVHENRNDEEVGAGDXRL 463
GYDDSSKGFDYKTC+V++AL+QQSP+IA GVH +RN+E++GAGD L
Sbjct: 91 GYDDSSKGFDYKTCNVLVALEQQSPDIAQGVHLDRNEEDIGAGDQGL 137
Score = 92.7 bits (220), Expect = 1e-18
Identities = 44/71 (61%), Positives = 50/71 (70%)
Frame = +3
Query: 441 LGQETXXLMFGYATDXTEXCMPLTVVLAHKLNQKIAXLXRNGEFWWARPXSKTQVTCEYV 620
+G LMFGYATD TE CMPLT+VLAHKLN K+A L RNG W RP SKTQVT +Y+
Sbjct: 130 IGAGDQGLMFGYATDETEECMPLTIVLAHKLNAKLAELRRNGTLPWLRPDSKTQVTVQYM 189
Query: 621 FAGGATVPQRV 653
GA +P RV
Sbjct: 190 QDRGAVLPIRV 200
>DQ083239-1|AAY85355.1| 395|Homo sapiens methionine
adenosyltransferase II protein.
Length = 395
Score = 186 bits (452), Expect = 8e-47
Identities = 83/107 (77%), Positives = 97/107 (90%)
Frame = +2
Query: 143 DKMCDQISDAILXAHLNQDPDAKVACETITKTGMVLLCGEITSKANVDYQKVVRETVKHI 322
DK+CDQISDA+L AHL QDPDAKVACET+ KTGM+LL GEITS+A VDYQKVVRE VKHI
Sbjct: 31 DKICDQISDAVLDAHLQQDPDAKVACETVAKTGMILLAGEITSRAAVDYQKVVREAVKHI 90
Query: 323 GYDDSSKGFDYKTCSVMLALDQQSPNIAAGVHENRNDEEVGAGDXRL 463
GYDDSSKGFDYKTC+V++AL+QQSP+IA GVH +RN+E++GAGD L
Sbjct: 91 GYDDSSKGFDYKTCNVLVALEQQSPDIAQGVHLDRNEEDIGAGDQGL 137
Score = 92.7 bits (220), Expect = 1e-18
Identities = 44/71 (61%), Positives = 50/71 (70%)
Frame = +3
Query: 441 LGQETXXLMFGYATDXTEXCMPLTVVLAHKLNQKIAXLXRNGEFWWARPXSKTQVTCEYV 620
+G LMFGYATD TE CMPLT+VLAHKLN K+A L RNG W RP SKTQVT +Y+
Sbjct: 130 IGAGDQGLMFGYATDETEECMPLTIVLAHKLNAKLAELRRNGTLPWLRPDSKTQVTVQYM 189
Query: 621 FAGGATVPQRV 653
GA +P RV
Sbjct: 190 QDRGAVLPIRV 200
>BC001854-1|AAH01854.1| 395|Homo sapiens methionine
adenosyltransferase II, alpha protein.
Length = 395
Score = 186 bits (452), Expect = 8e-47
Identities = 83/107 (77%), Positives = 97/107 (90%)
Frame = +2
Query: 143 DKMCDQISDAILXAHLNQDPDAKVACETITKTGMVLLCGEITSKANVDYQKVVRETVKHI 322
DK+CDQISDA+L AHL QDPDAKVACET+ KTGM+LL GEITS+A VDYQKVVRE VKHI
Sbjct: 31 DKICDQISDAVLDAHLQQDPDAKVACETVAKTGMILLAGEITSRAAVDYQKVVREAVKHI 90
Query: 323 GYDDSSKGFDYKTCSVMLALDQQSPNIAAGVHENRNDEEVGAGDXRL 463
GYDDSSKGFDYKTC+V++AL+QQSP+IA GVH +RN+E++GAGD L
Sbjct: 91 GYDDSSKGFDYKTCNVLVALEQQSPDIAQGVHLDRNEEDIGAGDQGL 137
Score = 92.7 bits (220), Expect = 1e-18
Identities = 44/71 (61%), Positives = 50/71 (70%)
Frame = +3
Query: 441 LGQETXXLMFGYATDXTEXCMPLTVVLAHKLNQKIAXLXRNGEFWWARPXSKTQVTCEYV 620
+G LMFGYATD TE CMPLT+VLAHKLN K+A L RNG W RP SKTQVT +Y+
Sbjct: 130 IGAGDQGLMFGYATDETEECMPLTIVLAHKLNAKLAELRRNGTLPWLRPDSKTQVTVQYM 189
Query: 621 FAGGATVPQRV 653
GA +P RV
Sbjct: 190 QDRGAVLPIRV 200
>BC001686-1|AAH01686.1| 395|Homo sapiens methionine
adenosyltransferase II, alpha protein.
Length = 395
Score = 186 bits (452), Expect = 8e-47
Identities = 83/107 (77%), Positives = 97/107 (90%)
Frame = +2
Query: 143 DKMCDQISDAILXAHLNQDPDAKVACETITKTGMVLLCGEITSKANVDYQKVVRETVKHI 322
DK+CDQISDA+L AHL QDPDAKVACET+ KTGM+LL GEITS+A VDYQKVVRE VKHI
Sbjct: 31 DKICDQISDAVLDAHLQQDPDAKVACETVAKTGMILLAGEITSRAAVDYQKVVREAVKHI 90
Query: 323 GYDDSSKGFDYKTCSVMLALDQQSPNIAAGVHENRNDEEVGAGDXRL 463
GYDDSSKGFDYKTC+V++AL+QQSP+IA GVH +RN+E++GAGD L
Sbjct: 91 GYDDSSKGFDYKTCNVLVALEQQSPDIAQGVHLDRNEEDIGAGDQGL 137
Score = 92.7 bits (220), Expect = 1e-18
Identities = 44/71 (61%), Positives = 50/71 (70%)
Frame = +3
Query: 441 LGQETXXLMFGYATDXTEXCMPLTVVLAHKLNQKIAXLXRNGEFWWARPXSKTQVTCEYV 620
+G LMFGYATD TE CMPLT+VLAHKLN K+A L RNG W RP SKTQVT +Y+
Sbjct: 130 IGAGDQGLMFGYATDETEECMPLTIVLAHKLNAKLAELRRNGTLPWLRPDSKTQVTVQYM 189
Query: 621 FAGGATVPQRV 653
GA +P RV
Sbjct: 190 QDRGAVLPIRV 200
>AC016753-1|AAY24339.1| 395|Homo sapiens unknown protein.
Length = 395
Score = 186 bits (452), Expect = 8e-47
Identities = 83/107 (77%), Positives = 97/107 (90%)
Frame = +2
Query: 143 DKMCDQISDAILXAHLNQDPDAKVACETITKTGMVLLCGEITSKANVDYQKVVRETVKHI 322
DK+CDQISDA+L AHL QDPDAKVACET+ KTGM+LL GEITS+A VDYQKVVRE VKHI
Sbjct: 31 DKICDQISDAVLDAHLQQDPDAKVACETVAKTGMILLAGEITSRAAVDYQKVVREAVKHI 90
Query: 323 GYDDSSKGFDYKTCSVMLALDQQSPNIAAGVHENRNDEEVGAGDXRL 463
GYDDSSKGFDYKTC+V++AL+QQSP+IA GVH +RN+E++GAGD L
Sbjct: 91 GYDDSSKGFDYKTCNVLVALEQQSPDIAQGVHLDRNEEDIGAGDQGL 137
Score = 92.7 bits (220), Expect = 1e-18
Identities = 44/71 (61%), Positives = 50/71 (70%)
Frame = +3
Query: 441 LGQETXXLMFGYATDXTEXCMPLTVVLAHKLNQKIAXLXRNGEFWWARPXSKTQVTCEYV 620
+G LMFGYATD TE CMPLT+VLAHKLN K+A L RNG W RP SKTQVT +Y+
Sbjct: 130 IGAGDQGLMFGYATDETEECMPLTIVLAHKLNAKLAELRRNGTLPWLRPDSKTQVTVQYM 189
Query: 621 FAGGATVPQRV 653
GA +P RV
Sbjct: 190 QDRGAVLPIRV 200
>X69078-1|CAA48822.1| 395|Homo sapiens methionine
adenosyltransferase protein.
Length = 395
Score = 179 bits (436), Expect = 7e-45
Identities = 80/107 (74%), Positives = 97/107 (90%)
Frame = +2
Query: 143 DKMCDQISDAILXAHLNQDPDAKVACETITKTGMVLLCGEITSKANVDYQKVVRETVKHI 322
DK+CDQISDA+L AHL QDP+AKVACET+ KTGMVLLCGEITS A VDYQ+VVR+T+KHI
Sbjct: 31 DKICDQISDAVLDAHLKQDPNAKVACETVCKTGMVLLCGEITSMAMVDYQRVVRDTIKHI 90
Query: 323 GYDDSSKGFDYKTCSVMLALDQQSPNIAAGVHENRNDEEVGAGDXRL 463
GYDDS+KGFD+KTC+V++AL+QQSP+IA VH +RN+E+VGAGD L
Sbjct: 91 GYDDSAKGFDFKTCNVLVALEQQSPDIAQCVHLDRNEEDVGAGDQGL 137
Score = 89.0 bits (211), Expect = 1e-17
Identities = 40/71 (56%), Positives = 50/71 (70%)
Frame = +3
Query: 441 LGQETXXLMFGYATDXTEXCMPLTVVLAHKLNQKIAXLXRNGEFWWARPXSKTQVTCEYV 620
+G LMFGYATD TE CMPLT++LAHKLN ++A L R+G W RP SKTQVT +Y+
Sbjct: 130 VGAGDQGLMFGYATDETEECMPLTIILAHKLNARMADLRRSGLLPWLRPDSKTQVTVQYM 189
Query: 621 FAGGATVPQRV 653
GA +P R+
Sbjct: 190 QDNGAVIPVRI 200
>D49357-1|BAA08355.1| 395|Homo sapiens S-adenosylmethionine
synthetase protein.
Length = 395
Score = 179 bits (436), Expect = 7e-45
Identities = 80/107 (74%), Positives = 97/107 (90%)
Frame = +2
Query: 143 DKMCDQISDAILXAHLNQDPDAKVACETITKTGMVLLCGEITSKANVDYQKVVRETVKHI 322
DK+CDQISDA+L AHL QDP+AKVACET+ KTGMVLLCGEITS A VDYQ+VVR+T+KHI
Sbjct: 31 DKICDQISDAVLDAHLKQDPNAKVACETVCKTGMVLLCGEITSMAMVDYQRVVRDTIKHI 90
Query: 323 GYDDSSKGFDYKTCSVMLALDQQSPNIAAGVHENRNDEEVGAGDXRL 463
GYDDS+KGFD+KTC+V++AL+QQSP+IA VH +RN+E+VGAGD L
Sbjct: 91 GYDDSAKGFDFKTCNVLVALEQQSPDIAQCVHLDRNEEDVGAGDQGL 137
Score = 89.0 bits (211), Expect = 1e-17
Identities = 40/71 (56%), Positives = 50/71 (70%)
Frame = +3
Query: 441 LGQETXXLMFGYATDXTEXCMPLTVVLAHKLNQKIAXLXRNGEFWWARPXSKTQVTCEYV 620
+G LMFGYATD TE CMPLT++LAHKLN ++A L R+G W RP SKTQVT +Y+
Sbjct: 130 VGAGDQGLMFGYATDETEECMPLTIILAHKLNARMADLRRSGLLPWLRPDSKTQVTVQYM 189
Query: 621 FAGGATVPQRV 653
GA +P R+
Sbjct: 190 QDNGAVIPVRI 200
>BC018359-1|AAH18359.1| 395|Homo sapiens methionine
adenosyltransferase I, alpha protein.
Length = 395
Score = 179 bits (436), Expect = 7e-45
Identities = 80/107 (74%), Positives = 97/107 (90%)
Frame = +2
Query: 143 DKMCDQISDAILXAHLNQDPDAKVACETITKTGMVLLCGEITSKANVDYQKVVRETVKHI 322
DK+CDQISDA+L AHL QDP+AKVACET+ KTGMVLLCGEITS A VDYQ+VVR+T+KHI
Sbjct: 31 DKICDQISDAVLDAHLKQDPNAKVACETVCKTGMVLLCGEITSMAMVDYQRVVRDTIKHI 90
Query: 323 GYDDSSKGFDYKTCSVMLALDQQSPNIAAGVHENRNDEEVGAGDXRL 463
GYDDS+KGFD+KTC+V++AL+QQSP+IA VH +RN+E+VGAGD L
Sbjct: 91 GYDDSAKGFDFKTCNVLVALEQQSPDIAQCVHLDRNEEDVGAGDQGL 137
Score = 89.0 bits (211), Expect = 1e-17
Identities = 40/71 (56%), Positives = 50/71 (70%)
Frame = +3
Query: 441 LGQETXXLMFGYATDXTEXCMPLTVVLAHKLNQKIAXLXRNGEFWWARPXSKTQVTCEYV 620
+G LMFGYATD TE CMPLT++LAHKLN ++A L R+G W RP SKTQVT +Y+
Sbjct: 130 VGAGDQGLMFGYATDETEECMPLTIILAHKLNARMADLRRSGLLPWLRPDSKTQVTVQYM 189
Query: 621 FAGGATVPQRV 653
GA +P R+
Sbjct: 190 QDNGAVIPVRI 200
>AL359195-2|CAI13695.1| 395|Homo sapiens methionine
adenosyltransferase I, alpha protein.
Length = 395
Score = 179 bits (436), Expect = 7e-45
Identities = 80/107 (74%), Positives = 97/107 (90%)
Frame = +2
Query: 143 DKMCDQISDAILXAHLNQDPDAKVACETITKTGMVLLCGEITSKANVDYQKVVRETVKHI 322
DK+CDQISDA+L AHL QDP+AKVACET+ KTGMVLLCGEITS A VDYQ+VVR+T+KHI
Sbjct: 31 DKICDQISDAVLDAHLKQDPNAKVACETVCKTGMVLLCGEITSMAMVDYQRVVRDTIKHI 90
Query: 323 GYDDSSKGFDYKTCSVMLALDQQSPNIAAGVHENRNDEEVGAGDXRL 463
GYDDS+KGFD+KTC+V++AL+QQSP+IA VH +RN+E+VGAGD L
Sbjct: 91 GYDDSAKGFDFKTCNVLVALEQQSPDIAQCVHLDRNEEDVGAGDQGL 137
Score = 89.0 bits (211), Expect = 1e-17
Identities = 40/71 (56%), Positives = 50/71 (70%)
Frame = +3
Query: 441 LGQETXXLMFGYATDXTEXCMPLTVVLAHKLNQKIAXLXRNGEFWWARPXSKTQVTCEYV 620
+G LMFGYATD TE CMPLT++LAHKLN ++A L R+G W RP SKTQVT +Y+
Sbjct: 130 VGAGDQGLMFGYATDETEECMPLTIILAHKLNARMADLRRSGLLPWLRPDSKTQVTVQYM 189
Query: 621 FAGGATVPQRV 653
GA +P R+
Sbjct: 190 QDNGAVIPVRI 200
>AL359195-3|CAI13696.1| 145|Homo sapiens methionine
adenosyltransferase I, alpha protein.
Length = 145
Score = 89.0 bits (211), Expect = 1e-17
Identities = 40/71 (56%), Positives = 50/71 (70%)
Frame = +3
Query: 441 LGQETXXLMFGYATDXTEXCMPLTVVLAHKLNQKIAXLXRNGEFWWARPXSKTQVTCEYV 620
+G LMFGYATD TE CMPLT++LAHKLN ++A L R+G W RP SKTQVT +Y+
Sbjct: 67 VGAGDQGLMFGYATDETEECMPLTIILAHKLNARMADLRRSGLLPWLRPDSKTQVTVQYM 126
Query: 621 FAGGATVPQRV 653
GA +P R+
Sbjct: 127 QDNGAVIPVRI 137
Score = 62.5 bits (145), Expect = 1e-09
Identities = 29/52 (55%), Positives = 41/52 (78%), Gaps = 3/52 (5%)
Frame = +2
Query: 317 HIGYDDSSK---GFDYKTCSVMLALDQQSPNIAAGVHENRNDEEVGAGDXRL 463
H+ D ++K GFD+KTC+V++AL+QQSP+IA VH +RN+E+VGAGD L
Sbjct: 23 HLKQDPNAKVACGFDFKTCNVLVALEQQSPDIAQCVHLDRNEEDVGAGDQGL 74
Score = 54.8 bits (126), Expect = 3e-07
Identities = 33/73 (45%), Positives = 40/73 (54%)
Frame = +2
Query: 143 DKMCDQISDAILXAHLNQDPDAKVACETITKTGMVLLCGEITSKANVDYQKVVRETVKHI 322
DK+CDQISDA+L AHL QDP+AKVAC KT VL+ E S + R + +
Sbjct: 9 DKICDQISDAVLDAHLKQDPNAKVACGFDFKTCNVLVALEQQSPDIAQCVHLDRNE-EDV 67
Query: 323 GYDDSSKGFDYKT 361
G D F Y T
Sbjct: 68 GAGDQGLMFGYAT 80
>AL583807-2|CAH69984.3| 1575|Homo sapiens laminin, gamma 3 protein.
Length = 1575
Score = 30.3 bits (65), Expect = 6.3
Identities = 17/61 (27%), Positives = 26/61 (42%), Gaps = 1/61 (1%)
Frame = -2
Query: 476 ITEHQXXGLLPQLPRHFCSHAPQQQCLVIVGLVRASHCMSCNQSLWTNHHN-QYV*PFRA 300
+ E+ G L Q H C P+ C + +HC C+ + HHN Y+ F +
Sbjct: 38 VFENAAFGRLAQAS-HTCGSPPEDFCPHVGAAGAGAHCQRCDAADPQRHHNASYLTDFHS 96
Query: 299 Q 297
Q
Sbjct: 97 Q 97
>AL583807-1|CAH69983.1| 1587|Homo sapiens laminin, gamma 3 protein.
Length = 1587
Score = 30.3 bits (65), Expect = 6.3
Identities = 17/61 (27%), Positives = 26/61 (42%), Gaps = 1/61 (1%)
Frame = -2
Query: 476 ITEHQXXGLLPQLPRHFCSHAPQQQCLVIVGLVRASHCMSCNQSLWTNHHN-QYV*PFRA 300
+ E+ G L Q H C P+ C + +HC C+ + HHN Y+ F +
Sbjct: 38 VFENAAFGRLAQAS-HTCGSPPEDFCPHVGAAGAGAHCQRCDAADPQRHHNASYLTDFHS 96
Query: 299 Q 297
Q
Sbjct: 97 Q 97
>AL355872-3|CAI39529.1| 1587|Homo sapiens laminin, gamma 3 protein.
Length = 1587
Score = 30.3 bits (65), Expect = 6.3
Identities = 17/61 (27%), Positives = 26/61 (42%), Gaps = 1/61 (1%)
Frame = -2
Query: 476 ITEHQXXGLLPQLPRHFCSHAPQQQCLVIVGLVRASHCMSCNQSLWTNHHN-QYV*PFRA 300
+ E+ G L Q H C P+ C + +HC C+ + HHN Y+ F +
Sbjct: 38 VFENAAFGRLAQAS-HTCGSPPEDFCPHVGAAGAGAHCQRCDAADPQRHHNASYLTDFHS 96
Query: 299 Q 297
Q
Sbjct: 97 Q 97
>AL355872-2|CAI39530.2| 1619|Homo sapiens laminin, gamma 3 protein.
Length = 1619
Score = 30.3 bits (65), Expect = 6.3
Identities = 17/61 (27%), Positives = 26/61 (42%), Gaps = 1/61 (1%)
Frame = -2
Query: 476 ITEHQXXGLLPQLPRHFCSHAPQQQCLVIVGLVRASHCMSCNQSLWTNHHN-QYV*PFRA 300
+ E+ G L Q H C P+ C + +HC C+ + HHN Y+ F +
Sbjct: 82 VFENAAFGRLAQAS-HTCGSPPEDFCPHVGAAGAGAHCQRCDAADPQRHHNASYLTDFHS 140
Query: 299 Q 297
Q
Sbjct: 141 Q 141
>AK075536-1|BAC11679.1| 529|Homo sapiens protein ( Homo sapiens
cDNA PSEC0236 fis, clone HEMBA1007104, highly similar to
Laminin gamma-3 chain precursor. ).
Length = 529
Score = 30.3 bits (65), Expect = 6.3
Identities = 17/61 (27%), Positives = 26/61 (42%), Gaps = 1/61 (1%)
Frame = -2
Query: 476 ITEHQXXGLLPQLPRHFCSHAPQQQCLVIVGLVRASHCMSCNQSLWTNHHN-QYV*PFRA 300
+ E+ G L Q H C P+ C + +HC C+ + HHN Y+ F +
Sbjct: 38 VFENAAFGRLAQAS-HTCGSPPEDFCPHVGAAGAGAHCQRCDAADPQRHHNASYLTDFHS 96
Query: 299 Q 297
Q
Sbjct: 97 Q 97
>AF041835-1|AAD36991.1| 1587|Homo sapiens laminin gamma 3 chain
precursor protein.
Length = 1587
Score = 30.3 bits (65), Expect = 6.3
Identities = 17/61 (27%), Positives = 26/61 (42%), Gaps = 1/61 (1%)
Frame = -2
Query: 476 ITEHQXXGLLPQLPRHFCSHAPQQQCLVIVGLVRASHCMSCNQSLWTNHHN-QYV*PFRA 300
+ E+ G L Q H C P+ C + +HC C+ + HHN Y+ F +
Sbjct: 38 VFENAAFGRLAQAS-HTCGSPPEDFCPHVGAAGAGAHCQRCDAADPQRHHNASYLTDFHS 96
Query: 299 Q 297
Q
Sbjct: 97 Q 97
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 99,736,006
Number of Sequences: 237096
Number of extensions: 1997804
Number of successful extensions: 7561
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 7451
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7561
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7310122300
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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