Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP02_F_M24
(654 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U41009-4|AAA82280.1| 404|Caenorhabditis elegans Hypothetical pr... 176 1e-44
U41009-2|AAA82279.1| 404|Caenorhabditis elegans Hypothetical pr... 176 1e-44
U56963-9|AAB38126.2| 404|Caenorhabditis elegans Temporarily ass... 173 7e-44
Z81485-1|CAB03975.1| 403|Caenorhabditis elegans Hypothetical pr... 169 1e-42
U41009-5|AAO44915.1| 173|Caenorhabditis elegans Hypothetical pr... 120 9e-28
U41009-3|AAO44916.1| 353|Caenorhabditis elegans Hypothetical pr... 115 3e-26
U56963-10|AAM97949.1| 353|Caenorhabditis elegans Temporarily as... 113 1e-25
AL110479-11|CAB54357.1| 363|Caenorhabditis elegans Hypothetical... 90 1e-18
AL110479-10|CAD56249.1| 345|Caenorhabditis elegans Hypothetical... 90 1e-18
U41009-7|AAN84884.1| 51|Caenorhabditis elegans Hypothetical pr... 51 6e-07
Z67884-5|CAA91810.1| 1787|Caenorhabditis elegans Hypothetical pr... 29 2.2
Z67881-4|CAA91798.1| 1787|Caenorhabditis elegans Hypothetical pr... 29 2.2
AF308444-1|AAG29837.1| 1787|Caenorhabditis elegans CHD-3 protein. 29 2.2
U49956-1|AAO38615.1| 669|Caenorhabditis elegans Hypothetical pr... 28 5.0
AL132898-18|CAC14411.2| 417|Caenorhabditis elegans Hypothetical... 28 5.0
U28991-14|AAA68388.1| 352|Caenorhabditis elegans Hypothetical p... 28 6.7
U28991-13|AAA68387.1| 281|Caenorhabditis elegans Hypothetical p... 28 6.7
AF016681-20|AAB66167.1| 370|Caenorhabditis elegans Hypothetical... 27 8.8
AF000198-4|AAB53058.2| 175|Caenorhabditis elegans Hypothetical ... 27 8.8
>U41009-4|AAA82280.1| 404|Caenorhabditis elegans Hypothetical
protein C06E7.1a protein.
Length = 404
Score = 176 bits (428), Expect = 1e-44
Identities = 78/104 (75%), Positives = 93/104 (89%)
Frame = +2
Query: 143 DKMCDQISDAILXAHLNQDPDAKVACETITKTGMVLLCGEITSKANVDYQKVVRETVKHI 322
DKMCDQISDA+L AHL QDP AKVACET+TKTGM++LCGEITSKA VDYQ +VR +K I
Sbjct: 19 DKMCDQISDAVLDAHLAQDPHAKVACETVTKTGMIMLCGEITSKAVVDYQVLVRNVIKKI 78
Query: 323 GYDDSSKGFDYKTCSVMLALDQQSPNIAAGVHENRNDEEVGAGD 454
GYDDSSKGFDYKTC+V++AL+QQSP IAAGVH +++ ++VGAGD
Sbjct: 79 GYDDSSKGFDYKTCNVLVALEQQSPEIAAGVHVDKDSDDVGAGD 122
Score = 90.2 bits (214), Expect = 1e-18
Identities = 42/71 (59%), Positives = 50/71 (70%)
Frame = +3
Query: 441 LGQETXXLMFGYATDXTEXCMPLTVVLAHKLNQKIAXLXRNGEFWWARPXSKTQVTCEYV 620
+G +MFGYATD TE MPLT++L+HKLN+K+ L R+GE W RP SKTQVT EY
Sbjct: 118 VGAGDQGIMFGYATDETEEAMPLTLLLSHKLNRKLHELRRSGELEWVRPDSKTQVTIEYA 177
Query: 621 FAGGATVPQRV 653
GGA VP RV
Sbjct: 178 SEGGACVPLRV 188
>U41009-2|AAA82279.1| 404|Caenorhabditis elegans Hypothetical
protein C06E7.3a protein.
Length = 404
Score = 176 bits (428), Expect = 1e-44
Identities = 78/104 (75%), Positives = 93/104 (89%)
Frame = +2
Query: 143 DKMCDQISDAILXAHLNQDPDAKVACETITKTGMVLLCGEITSKANVDYQKVVRETVKHI 322
DKMCDQISDA+L AHL QDP AKVACET+TKTGM++LCGEITSKA VDYQ +VR +K I
Sbjct: 19 DKMCDQISDAVLDAHLAQDPHAKVACETVTKTGMIMLCGEITSKAVVDYQVLVRNVIKKI 78
Query: 323 GYDDSSKGFDYKTCSVMLALDQQSPNIAAGVHENRNDEEVGAGD 454
GYDDSSKGFDYKTC+V++AL+QQSP IAAGVH +++ ++VGAGD
Sbjct: 79 GYDDSSKGFDYKTCNVLVALEQQSPEIAAGVHVDKDSDDVGAGD 122
Score = 90.2 bits (214), Expect = 1e-18
Identities = 42/71 (59%), Positives = 50/71 (70%)
Frame = +3
Query: 441 LGQETXXLMFGYATDXTEXCMPLTVVLAHKLNQKIAXLXRNGEFWWARPXSKTQVTCEYV 620
+G +MFGYATD TE MPLT++L+HKLN+K+ L R+GE W RP SKTQVT EY
Sbjct: 118 VGAGDQGIMFGYATDETEEAMPLTLLLSHKLNRKLHELRRSGELEWVRPDSKTQVTIEYA 177
Query: 621 FAGGATVPQRV 653
GGA VP RV
Sbjct: 178 SEGGACVPLRV 188
>U56963-9|AAB38126.2| 404|Caenorhabditis elegans Temporarily
assigned gene nameprotein 32, isoform a protein.
Length = 404
Score = 173 bits (422), Expect = 7e-44
Identities = 78/104 (75%), Positives = 92/104 (88%)
Frame = +2
Query: 143 DKMCDQISDAILXAHLNQDPDAKVACETITKTGMVLLCGEITSKANVDYQKVVRETVKHI 322
DKMCDQISDA+L AHL QDP AKVACET+TKTGM++LCGEITSKA VDYQ +VR +K I
Sbjct: 19 DKMCDQISDAVLDAHLAQDPHAKVACETVTKTGMIMLCGEITSKAVVDYQVLVRNVIKKI 78
Query: 323 GYDDSSKGFDYKTCSVMLALDQQSPNIAAGVHENRNDEEVGAGD 454
GYDDSSKGFDYKTC+V++AL+QQSP IAAGVH +++ +VGAGD
Sbjct: 79 GYDDSSKGFDYKTCNVLVALEQQSPEIAAGVHVDKDIADVGAGD 122
Score = 88.6 bits (210), Expect = 3e-18
Identities = 42/71 (59%), Positives = 49/71 (69%)
Frame = +3
Query: 441 LGQETXXLMFGYATDXTEXCMPLTVVLAHKLNQKIAXLXRNGEFWWARPXSKTQVTCEYV 620
+G +MFGYATD TE MPLT++L+HKLN K+ L R+GE W RP SKTQVT EY
Sbjct: 118 VGAGDQGIMFGYATDETEEAMPLTLLLSHKLNYKLHELRRSGELEWVRPDSKTQVTIEYS 177
Query: 621 FAGGATVPQRV 653
GGA VP RV
Sbjct: 178 SEGGACVPLRV 188
>Z81485-1|CAB03975.1| 403|Caenorhabditis elegans Hypothetical
protein C49F5.1 protein.
Length = 403
Score = 169 bits (412), Expect = 1e-42
Identities = 76/104 (73%), Positives = 92/104 (88%)
Frame = +2
Query: 143 DKMCDQISDAILXAHLNQDPDAKVACETITKTGMVLLCGEITSKANVDYQKVVRETVKHI 322
DKMCDQISDA+L AHL QDP+AKVACET+TKTGMV+LCGEITSKA VDYQ +VR ++ I
Sbjct: 18 DKMCDQISDAVLDAHLKQDPNAKVACETVTKTGMVMLCGEITSKAVVDYQVLVRRVIEKI 77
Query: 323 GYDDSSKGFDYKTCSVMLALDQQSPNIAAGVHENRNDEEVGAGD 454
G+ DSS GFD+KTC+V++AL+QQSP IAAGVH N++ E+VGAGD
Sbjct: 78 GFTDSSIGFDHKTCNVLVALEQQSPEIAAGVHVNKDGEDVGAGD 121
Score = 83.0 bits (196), Expect = 2e-16
Identities = 38/71 (53%), Positives = 48/71 (67%)
Frame = +3
Query: 441 LGQETXXLMFGYATDXTEXCMPLTVVLAHKLNQKIAXLXRNGEFWWARPXSKTQVTCEYV 620
+G +MFGYATD TE MPLT++L+HK+N ++ L RNG W RP SK+QVT EY
Sbjct: 117 VGAGDQGIMFGYATDETEETMPLTLILSHKINAELHKLRRNGTLPWVRPDSKSQVTIEYE 176
Query: 621 FAGGATVPQRV 653
GAT+P RV
Sbjct: 177 SRHGATIPLRV 187
>U41009-5|AAO44915.1| 173|Caenorhabditis elegans Hypothetical
protein C06E7.1d protein.
Length = 173
Score = 120 bits (289), Expect = 9e-28
Identities = 54/68 (79%), Positives = 60/68 (88%)
Frame = +2
Query: 143 DKMCDQISDAILXAHLNQDPDAKVACETITKTGMVLLCGEITSKANVDYQKVVRETVKHI 322
DKMCDQISDA+L AHL QDP AKVACET+TKTGM++LCGEITSKA VDYQ +VR +K I
Sbjct: 19 DKMCDQISDAVLDAHLAQDPHAKVACETVTKTGMIMLCGEITSKAVVDYQVLVRNVIKKI 78
Query: 323 GYDDSSKG 346
GYDDSSKG
Sbjct: 79 GYDDSSKG 86
>U41009-3|AAO44916.1| 353|Caenorhabditis elegans Hypothetical
protein C06E7.3b protein.
Length = 353
Score = 115 bits (277), Expect = 3e-26
Identities = 50/71 (70%), Positives = 63/71 (88%)
Frame = +2
Query: 242 MVLLCGEITSKANVDYQKVVRETVKHIGYDDSSKGFDYKTCSVMLALDQQSPNIAAGVHE 421
M++LCGEITSKA VDYQ +VR +K IGYDDSSKGFDYKTC+V++AL+QQSP IAAGVH
Sbjct: 1 MIMLCGEITSKAVVDYQVLVRNVIKKIGYDDSSKGFDYKTCNVLVALEQQSPEIAAGVHV 60
Query: 422 NRNDEEVGAGD 454
+++ ++VGAGD
Sbjct: 61 DKDSDDVGAGD 71
Score = 90.2 bits (214), Expect = 1e-18
Identities = 42/71 (59%), Positives = 50/71 (70%)
Frame = +3
Query: 441 LGQETXXLMFGYATDXTEXCMPLTVVLAHKLNQKIAXLXRNGEFWWARPXSKTQVTCEYV 620
+G +MFGYATD TE MPLT++L+HKLN+K+ L R+GE W RP SKTQVT EY
Sbjct: 67 VGAGDQGIMFGYATDETEEAMPLTLLLSHKLNRKLHELRRSGELEWVRPDSKTQVTIEYA 126
Query: 621 FAGGATVPQRV 653
GGA VP RV
Sbjct: 127 SEGGACVPLRV 137
>U56963-10|AAM97949.1| 353|Caenorhabditis elegans Temporarily
assigned gene nameprotein 32, isoform b protein.
Length = 353
Score = 113 bits (271), Expect = 1e-25
Identities = 50/71 (70%), Positives = 62/71 (87%)
Frame = +2
Query: 242 MVLLCGEITSKANVDYQKVVRETVKHIGYDDSSKGFDYKTCSVMLALDQQSPNIAAGVHE 421
M++LCGEITSKA VDYQ +VR +K IGYDDSSKGFDYKTC+V++AL+QQSP IAAGVH
Sbjct: 1 MIMLCGEITSKAVVDYQVLVRNVIKKIGYDDSSKGFDYKTCNVLVALEQQSPEIAAGVHV 60
Query: 422 NRNDEEVGAGD 454
+++ +VGAGD
Sbjct: 61 DKDIADVGAGD 71
Score = 88.6 bits (210), Expect = 3e-18
Identities = 42/71 (59%), Positives = 49/71 (69%)
Frame = +3
Query: 441 LGQETXXLMFGYATDXTEXCMPLTVVLAHKLNQKIAXLXRNGEFWWARPXSKTQVTCEYV 620
+G +MFGYATD TE MPLT++L+HKLN K+ L R+GE W RP SKTQVT EY
Sbjct: 67 VGAGDQGIMFGYATDETEEAMPLTLLLSHKLNYKLHELRRSGELEWVRPDSKTQVTIEYS 126
Query: 621 FAGGATVPQRV 653
GGA VP RV
Sbjct: 127 SEGGACVPLRV 137
>AL110479-11|CAB54357.1| 363|Caenorhabditis elegans Hypothetical
protein Y105C5B.12b protein.
Length = 363
Score = 89.8 bits (213), Expect = 1e-18
Identities = 41/71 (57%), Positives = 50/71 (70%)
Frame = +3
Query: 441 LGQETXXLMFGYATDXTEXCMPLTVVLAHKLNQKIAXLXRNGEFWWARPXSKTQVTCEYV 620
+G +MFGYATD TE MPLT++L+HKLN+K+ L R+GE W RP SKTQVT EY
Sbjct: 77 VGAGDQGIMFGYATDETEEAMPLTLLLSHKLNRKLHELRRSGELEWVRPDSKTQVTIEYA 136
Query: 621 FAGGATVPQRV 653
GGA +P RV
Sbjct: 137 SEGGACIPLRV 147
Score = 64.1 bits (149), Expect = 8e-11
Identities = 28/49 (57%), Positives = 39/49 (79%), Gaps = 3/49 (6%)
Frame = +2
Query: 317 HIGYDDSSK---GFDYKTCSVMLALDQQSPNIAAGVHENRNDEEVGAGD 454
H+ D +K GFDYKTC+V++AL+QQSP IAAGVH +++ ++VGAGD
Sbjct: 33 HLAQDPHAKVACGFDYKTCNVLVALEQQSPEIAAGVHVDKDSDDVGAGD 81
Score = 54.4 bits (125), Expect = 7e-08
Identities = 34/73 (46%), Positives = 40/73 (54%)
Frame = +2
Query: 143 DKMCDQISDAILXAHLNQDPDAKVACETITKTGMVLLCGEITSKANVDYQKVVRETVKHI 322
DKMCDQISDA+L AHL QDP AKVAC KT VL+ E S V +++ +
Sbjct: 19 DKMCDQISDAVLDAHLAQDPHAKVACGFDYKTCNVLVALEQQSPEIAAGVHVDKDS-DDV 77
Query: 323 GYDDSSKGFDYKT 361
G D F Y T
Sbjct: 78 GAGDQGIMFGYAT 90
>AL110479-10|CAD56249.1| 345|Caenorhabditis elegans Hypothetical
protein Y105C5B.12a protein.
Length = 345
Score = 89.8 bits (213), Expect = 1e-18
Identities = 41/71 (57%), Positives = 50/71 (70%)
Frame = +3
Query: 441 LGQETXXLMFGYATDXTEXCMPLTVVLAHKLNQKIAXLXRNGEFWWARPXSKTQVTCEYV 620
+G +MFGYATD TE MPLT++L+HKLN+K+ L R+GE W RP SKTQVT EY
Sbjct: 59 VGAGDQGIMFGYATDETEEAMPLTLLLSHKLNRKLHELRRSGELEWVRPDSKTQVTIEYA 118
Query: 621 FAGGATVPQRV 653
GGA +P RV
Sbjct: 119 SEGGACIPLRV 129
Score = 67.7 bits (158), Expect = 7e-12
Identities = 28/44 (63%), Positives = 37/44 (84%)
Frame = +2
Query: 323 GYDDSSKGFDYKTCSVMLALDQQSPNIAAGVHENRNDEEVGAGD 454
GY D GFDYKTC+V++AL+QQSP IAAGVH +++ ++VGAGD
Sbjct: 20 GYFDYRNGFDYKTCNVLVALEQQSPEIAAGVHVDKDSDDVGAGD 63
>U41009-7|AAN84884.1| 51|Caenorhabditis elegans Hypothetical
protein C06E7.1c protein.
Length = 51
Score = 51.2 bits (117), Expect = 6e-07
Identities = 22/26 (84%), Positives = 23/26 (88%)
Frame = +2
Query: 143 DKMCDQISDAILXAHLNQDPDAKVAC 220
DKMCDQISDA+L AHL QDP AKVAC
Sbjct: 19 DKMCDQISDAVLDAHLAQDPHAKVAC 44
>Z67884-5|CAA91810.1| 1787|Caenorhabditis elegans Hypothetical
protein T14G8.1 protein.
Length = 1787
Score = 29.5 bits (63), Expect = 2.2
Identities = 15/48 (31%), Positives = 27/48 (56%), Gaps = 1/48 (2%)
Frame = +2
Query: 170 AILXAHLNQDPDAKVACETITKTGM-VLLCGEITSKANVDYQKVVRET 310
A + ++ Q P+ +C + G VL+ E +KAN+DY ++ +ET
Sbjct: 290 ACIDENMEQPPEGDWSCPHCEEHGPDVLIVEEEPAKANMDYCRICKET 337
>Z67881-4|CAA91798.1| 1787|Caenorhabditis elegans Hypothetical
protein T14G8.1 protein.
Length = 1787
Score = 29.5 bits (63), Expect = 2.2
Identities = 15/48 (31%), Positives = 27/48 (56%), Gaps = 1/48 (2%)
Frame = +2
Query: 170 AILXAHLNQDPDAKVACETITKTGM-VLLCGEITSKANVDYQKVVRET 310
A + ++ Q P+ +C + G VL+ E +KAN+DY ++ +ET
Sbjct: 290 ACIDENMEQPPEGDWSCPHCEEHGPDVLIVEEEPAKANMDYCRICKET 337
>AF308444-1|AAG29837.1| 1787|Caenorhabditis elegans CHD-3 protein.
Length = 1787
Score = 29.5 bits (63), Expect = 2.2
Identities = 15/48 (31%), Positives = 27/48 (56%), Gaps = 1/48 (2%)
Frame = +2
Query: 170 AILXAHLNQDPDAKVACETITKTGM-VLLCGEITSKANVDYQKVVRET 310
A + ++ Q P+ +C + G VL+ E +KAN+DY ++ +ET
Sbjct: 290 ACIDENMEQPPEGDWSCPHCEEHGPDVLIVEEEPAKANMDYCRICKET 337
>U49956-1|AAO38615.1| 669|Caenorhabditis elegans Hypothetical
protein M03A1.3 protein.
Length = 669
Score = 28.3 bits (60), Expect = 5.0
Identities = 16/64 (25%), Positives = 30/64 (46%)
Frame = +2
Query: 224 TITKTGMVLLCGEITSKANVDYQKVVRETVKHIGYDDSSKGFDYKTCSVMLALDQQSPNI 403
T+T+TG L + + ++++ K + D ++K D KTC L +DQ N+
Sbjct: 37 TLTRTGDSLNLRIYDENSAIRKVHILQKEGKDVLVDCTNKKEDGKTCEAQLTVDQFEKNL 96
Query: 404 AAGV 415
+
Sbjct: 97 PISI 100
>AL132898-18|CAC14411.2| 417|Caenorhabditis elegans Hypothetical
protein Y59A8B.13 protein.
Length = 417
Score = 28.3 bits (60), Expect = 5.0
Identities = 12/34 (35%), Positives = 21/34 (61%), Gaps = 3/34 (8%)
Frame = +3
Query: 270 PKLTWIIKKLCAKRSNIL---VMMIRPKALITRH 362
PK+ W ++K+C K+ +I + I P+ L+T H
Sbjct: 253 PKIVWHLEKMCNKKEDISRGNPVSIPPQRLLTHH 286
>U28991-14|AAA68388.1| 352|Caenorhabditis elegans Hypothetical
protein F08F8.1 protein.
Length = 352
Score = 27.9 bits (59), Expect = 6.7
Identities = 15/41 (36%), Positives = 16/41 (39%)
Frame = -3
Query: 343 FGRIIITNMFDRFAHNFLIIHVSFGCDFATQKHHTGFSYGF 221
FGR D NF H FG HH GF +GF
Sbjct: 149 FGRPFGRRGMDHHGFNFHRHHHPFGAFHGFGGHHHGFGHGF 189
>U28991-13|AAA68387.1| 281|Caenorhabditis elegans Hypothetical
protein F08F8.5 protein.
Length = 281
Score = 27.9 bits (59), Expect = 6.7
Identities = 15/41 (36%), Positives = 16/41 (39%)
Frame = -3
Query: 343 FGRIIITNMFDRFAHNFLIIHVSFGCDFATQKHHTGFSYGF 221
FGR D NF H FG HH GF +GF
Sbjct: 223 FGRPFGRRGMDHHGFNFHRHHHPFGAFHGFGGHHHGFGHGF 263
>AF016681-20|AAB66167.1| 370|Caenorhabditis elegans Hypothetical
protein F22E5.1 protein.
Length = 370
Score = 27.5 bits (58), Expect = 8.8
Identities = 12/42 (28%), Positives = 23/42 (54%)
Frame = +3
Query: 234 KPVWCFCVAKSHPKLTWIIKKLCAKRSNILVMMIRPKALITR 359
KP+ + K HP + W+ L K+ N++ +M++ A T+
Sbjct: 197 KPLLLAELLKEHPNIWWMDAHLSVKKPNMVELMMKEVAEKTK 238
>AF000198-4|AAB53058.2| 175|Caenorhabditis elegans Hypothetical
protein T28F2.2 protein.
Length = 175
Score = 27.5 bits (58), Expect = 8.8
Identities = 9/34 (26%), Positives = 18/34 (52%)
Frame = +3
Query: 279 TWIIKKLCAKRSNILVMMIRPKALITRHAV*CSH 380
+W+++++C SN+ V+ + H V C H
Sbjct: 5 SWLLEEICTNFSNLTVLKFKELCNRASHLVLCGH 38
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,921,827
Number of Sequences: 27780
Number of extensions: 333577
Number of successful extensions: 788
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 748
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 787
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1455289764
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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