Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP02_F_M24
         (654 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ855482-1|ABH88169.1|  116|Apis mellifera chemosensory protein ...    23   1.9  
AJ973399-1|CAJ01446.1|  116|Apis mellifera hypothetical protein ...    23   1.9  
EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.          23   2.6  
EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.      23   2.6  
AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor p...    23   2.6  
L10433-1|AAA27732.1|  149|Apis mellifera transposase protein.          21   7.9  

>DQ855482-1|ABH88169.1|  116|Apis mellifera chemosensory protein 1
           protein.
          Length = 116

 Score = 23.4 bits (48), Expect = 1.9
 Identities = 7/18 (38%), Positives = 10/18 (55%)
 Frame = +2

Query: 512 CSACTQTQSENCXAXAKW 565
           C  CT+ Q +N    A+W
Sbjct: 75  CKKCTEIQKQNLDKLAEW 92


>AJ973399-1|CAJ01446.1|  116|Apis mellifera hypothetical protein
           protein.
          Length = 116

 Score = 23.4 bits (48), Expect = 1.9
 Identities = 7/18 (38%), Positives = 10/18 (55%)
 Frame = +2

Query: 512 CSACTQTQSENCXAXAKW 565
           C  CT+ Q +N    A+W
Sbjct: 75  CKKCTEIQKQNLDKLAEW 92


>EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.
          Length = 684

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 7/23 (30%), Positives = 15/23 (65%)
 Frame = +1

Query: 559 EMENFGGQDXIQKHRLLANMYLL 627
           ++ ++ G++ +  H+LL N Y L
Sbjct: 250 DLPDYRGEEYLYSHKLLLNRYYL 272


>EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.
          Length = 684

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 7/23 (30%), Positives = 15/23 (65%)
 Frame = +1

Query: 559 EMENFGGQDXIQKHRLLANMYLL 627
           ++ ++ G++ +  H+LL N Y L
Sbjct: 250 DLPDYRGEEYLYSHKLLLNRYYL 272


>AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor
           protein.
          Length = 587

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 10/24 (41%), Positives = 13/24 (54%)
 Frame = +1

Query: 130 VHYGRQNVRPNKRRYSXRAPESGS 201
           +H GR +V       S R+PES S
Sbjct: 307 IHRGRGSVHNGSNNGSPRSPESNS 330


>L10433-1|AAA27732.1|  149|Apis mellifera transposase protein.
          Length = 149

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 6/12 (50%), Positives = 7/12 (58%)
 Frame = +3

Query: 573 WWARPXSKTQVT 608
           WW+RP    Q T
Sbjct: 45  WWSRPREPAQTT 56


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 187,050
Number of Sequences: 438
Number of extensions: 3582
Number of successful extensions: 10
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 19804986
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)