Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP02_F_M20
         (641 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

06_01_0726 + 5319809-5319839,5319918-5319976,5320859-5320927,532...    71   8e-13
04_03_0370 + 15030829-15030837,15031579-15031957,15033434-150336...    27   9.6  

>06_01_0726 +
           5319809-5319839,5319918-5319976,5320859-5320927,
           5321009-5321071,5321360-5321419
          Length = 93

 Score = 70.9 bits (166), Expect = 8e-13
 Identities = 30/78 (38%), Positives = 52/78 (66%)
 Frame = +1

Query: 214 GNAPIMKKKKWAVDAEKPIGWIMEFVKKYLKLEADXKLFLYVNQTFAPSPDQIVRNLYEC 393
           GNAP +K+ K+ +   +    I++F+++ +  +    +FLYVN  F+P+PD+++ +LY  
Sbjct: 19  GNAPQLKQSKFKIGGNEKFLKIIDFLRRQIHQDT---VFLYVNSAFSPNPDELIIDLYNN 75

Query: 394 FGTDGKLVLHYCKSQAWG 447
           FG DG+LV++Y  S AWG
Sbjct: 76  FGIDGQLVVNYASSMAWG 93


>04_03_0370 +
           15030829-15030837,15031579-15031957,15033434-15033626,
           15033859-15034102,15035383-15035445
          Length = 295

 Score = 27.5 bits (58), Expect = 9.6
 Identities = 15/34 (44%), Positives = 18/34 (52%), Gaps = 1/34 (2%)
 Frame = +1

Query: 364 DQIVRN-LYECFGTDGKLVLHYCKSQAWG*RLML 462
           D+I+   L  C G +G   LHY K  AW  RL L
Sbjct: 257 DRIIHEVLLSCKGENGSGSLHYEKRNAWRKRLAL 290


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,449,662
Number of Sequences: 37544
Number of extensions: 257435
Number of successful extensions: 446
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 443
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 446
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1584867848
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)