Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP02_F_M20
(641 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC012266-1|AAH12266.2| 187|Homo sapiens ATG12 autophagy related... 124 2e-28
AB017507-1|BAA36493.1| 140|Homo sapiens Apg12 protein. 124 2e-28
CR542235-1|CAG47031.1| 117|Homo sapiens GABARAP protein. 34 0.49
CR533480-1|CAG38511.1| 117|Homo sapiens GABARAPL1 protein. 34 0.49
CR457043-1|CAG33324.1| 117|Homo sapiens GABARAP protein. 34 0.49
BC106749-1|AAI06750.1| 117|Homo sapiens GABA(A) receptor-associ... 34 0.49
BC106748-1|AAI06749.1| 117|Homo sapiens GABA(A) receptor-associ... 34 0.49
BC028315-1|AAH28315.1| 117|Homo sapiens GABA(A) receptor-associ... 34 0.49
BC009309-1|AAH09309.1| 117|Homo sapiens GABA(A) receptor-associ... 34 0.49
AF287012-1|AAK55962.1| 117|Homo sapiens early estrogen-regulate... 34 0.49
AF183425-1|AAG09694.1| 117|Homo sapiens HT004 protein protein. 34 0.49
AF161586-1|AAD47641.1| 117|Homo sapiens GABA-A receptor-associa... 34 0.49
AF087847-1|AAK20399.1| 117|Homo sapiens GABA-A receptor-associa... 34 0.49
AF044671-1|AAD02337.1| 117|Homo sapiens MM46 protein. 34 0.49
AB030711-1|BAB21549.1| 117|Homo sapiens MAP1 light chain 3 rela... 34 0.49
BT007452-1|AAP36120.1| 121|Homo sapiens microtubule-associated ... 33 1.1
BC015810-1|AAH15810.1| 121|Homo sapiens microtubule-associated ... 33 1.1
AL118520-2|CAI40290.1| 121|Homo sapiens microtubule-associated ... 33 1.1
AL118520-1|CAC14078.1| 125|Homo sapiens microtubule-associated ... 33 1.1
AF276658-1|AAK35151.1| 121|Homo sapiens MAP1 light chain 3-like... 33 1.1
CR542217-1|CAG47013.1| 117|Homo sapiens GABARAPL2 protein. 32 2.0
BC029601-1|AAH29601.1| 117|Homo sapiens GABA(A) receptor-associ... 32 2.0
BC014594-1|AAH14594.1| 117|Homo sapiens GABA(A) receptor-associ... 32 2.0
BC005985-1|AAH05985.1| 117|Homo sapiens GABA(A) receptor-associ... 32 2.0
AJ010569-1|CAA09249.1| 117|Homo sapiens GEF-2 protein protein. 32 2.0
AF087848-1|AAK20400.1| 117|Homo sapiens GABA-A receptor-associa... 32 2.0
AB030710-1|BAB21548.1| 117|Homo sapiens MAP1 light chain 3 rela... 32 2.0
>BC012266-1|AAH12266.2| 187|Homo sapiens ATG12 autophagy related 12
homolog (S. cerevisiae) protein.
Length = 187
Score = 124 bits (300), Expect = 2e-28
Identities = 54/81 (66%), Positives = 66/81 (81%)
Frame = +1
Query: 205 KRQGNAPIMKKKKWAVDAEKPIGWIMEFVKKYLKLEADXKLFLYVNQTFAPSPDQIVRNL 384
K G+ PIMK KKWAV+ + I +++F+KK+LKL A +LF+YVNQ+FAPSPDQ V L
Sbjct: 107 KAVGDTPIMKTKKWAVERTRTIQGLIDFIKKFLKLVASEQLFIYVNQSFAPSPDQEVGTL 166
Query: 385 YECFGTDGKLVLHYCKSQAWG 447
YECFG+DGKLVLHYCKSQAWG
Sbjct: 167 YECFGSDGKLVLHYCKSQAWG 187
>AB017507-1|BAA36493.1| 140|Homo sapiens Apg12 protein.
Length = 140
Score = 124 bits (300), Expect = 2e-28
Identities = 54/81 (66%), Positives = 66/81 (81%)
Frame = +1
Query: 205 KRQGNAPIMKKKKWAVDAEKPIGWIMEFVKKYLKLEADXKLFLYVNQTFAPSPDQIVRNL 384
K G+ PIMK KKWAV+ + I +++F+KK+LKL A +LF+YVNQ+FAPSPDQ V L
Sbjct: 60 KAVGDTPIMKTKKWAVERTRTIQGLIDFIKKFLKLVASEQLFIYVNQSFAPSPDQEVGTL 119
Query: 385 YECFGTDGKLVLHYCKSQAWG 447
YECFG+DGKLVLHYCKSQAWG
Sbjct: 120 YECFGSDGKLVLHYCKSQAWG 140
>CR542235-1|CAG47031.1| 117|Homo sapiens GABARAP protein.
Length = 117
Score = 33.9 bits (74), Expect = 0.49
Identities = 18/73 (24%), Positives = 33/73 (45%)
Frame = +1
Query: 229 MKKKKWAVDAEKPIGWIMEFVKKYLKLEADXKLFLYVNQTFAPSPDQIVRNLYECFGTDG 408
+ KKK+ V ++ +G ++K + L A+ LF +VN P+ + + E D
Sbjct: 44 LDKKKYLVPSDLTVGQFYFLIRKRIHLRAEDALFFFVNNVIPPTSATMGQLYQEHHEEDF 103
Query: 409 KLVLHYCKSQAWG 447
L + Y +G
Sbjct: 104 FLYIAYSDESVYG 116
>CR533480-1|CAG38511.1| 117|Homo sapiens GABARAPL1 protein.
Length = 117
Score = 33.9 bits (74), Expect = 0.49
Identities = 16/60 (26%), Positives = 30/60 (50%)
Frame = +1
Query: 211 QGNAPIMKKKKWAVDAEKPIGWIMEFVKKYLKLEADXKLFLYVNQTFAPSPDQIVRNLYE 390
+ P + K+K+ V ++ +G ++K + L + LF +VN T P+ + LYE
Sbjct: 38 KARVPDLDKRKYLVPSDLTVGQFYFLIRKRIHLRPEDALFFFVNNTIPPT-SATMGQLYE 96
>CR457043-1|CAG33324.1| 117|Homo sapiens GABARAP protein.
Length = 117
Score = 33.9 bits (74), Expect = 0.49
Identities = 18/73 (24%), Positives = 33/73 (45%)
Frame = +1
Query: 229 MKKKKWAVDAEKPIGWIMEFVKKYLKLEADXKLFLYVNQTFAPSPDQIVRNLYECFGTDG 408
+ KKK+ V ++ +G ++K + L A+ LF +VN P+ + + E D
Sbjct: 44 LDKKKYLVPSDLTVGQFYFLIRKRIHLRAEDALFFFVNNVIPPTSATMGQLYQEHHEEDF 103
Query: 409 KLVLHYCKSQAWG 447
L + Y +G
Sbjct: 104 FLYIAYSDESVYG 116
>BC106749-1|AAI06750.1| 117|Homo sapiens GABA(A)
receptor-associated protein protein.
Length = 117
Score = 33.9 bits (74), Expect = 0.49
Identities = 18/73 (24%), Positives = 33/73 (45%)
Frame = +1
Query: 229 MKKKKWAVDAEKPIGWIMEFVKKYLKLEADXKLFLYVNQTFAPSPDQIVRNLYECFGTDG 408
+ KKK+ V ++ +G ++K + L A+ LF +VN P+ + + E D
Sbjct: 44 LDKKKYLVPSDLTVGQFYFLIRKRIHLRAEDALFFFVNNVIPPTSATMGQLYQEHHEEDF 103
Query: 409 KLVLHYCKSQAWG 447
L + Y +G
Sbjct: 104 FLYIAYSDESVYG 116
>BC106748-1|AAI06749.1| 117|Homo sapiens GABA(A)
receptor-associated protein protein.
Length = 117
Score = 33.9 bits (74), Expect = 0.49
Identities = 18/73 (24%), Positives = 33/73 (45%)
Frame = +1
Query: 229 MKKKKWAVDAEKPIGWIMEFVKKYLKLEADXKLFLYVNQTFAPSPDQIVRNLYECFGTDG 408
+ KKK+ V ++ +G ++K + L A+ LF +VN P+ + + E D
Sbjct: 44 LDKKKYLVPSDLTVGQFYFLIRKRIHLRAEDALFFFVNNVIPPTSATMGQLYQEHHEEDF 103
Query: 409 KLVLHYCKSQAWG 447
L + Y +G
Sbjct: 104 FLYIAYSDESVYG 116
>BC028315-1|AAH28315.1| 117|Homo sapiens GABA(A)
receptor-associated protein like 1 protein.
Length = 117
Score = 33.9 bits (74), Expect = 0.49
Identities = 16/60 (26%), Positives = 30/60 (50%)
Frame = +1
Query: 211 QGNAPIMKKKKWAVDAEKPIGWIMEFVKKYLKLEADXKLFLYVNQTFAPSPDQIVRNLYE 390
+ P + K+K+ V ++ +G ++K + L + LF +VN T P+ + LYE
Sbjct: 38 KARVPDLDKRKYLVPSDLTVGQFYFLIRKRIHLRPEDALFFFVNNTIPPT-SATMGQLYE 96
>BC009309-1|AAH09309.1| 117|Homo sapiens GABA(A)
receptor-associated protein like 1 protein.
Length = 117
Score = 33.9 bits (74), Expect = 0.49
Identities = 16/60 (26%), Positives = 30/60 (50%)
Frame = +1
Query: 211 QGNAPIMKKKKWAVDAEKPIGWIMEFVKKYLKLEADXKLFLYVNQTFAPSPDQIVRNLYE 390
+ P + K+K+ V ++ +G ++K + L + LF +VN T P+ + LYE
Sbjct: 38 KARVPDLDKRKYLVPSDLTVGQFYFLIRKRIHLRPEDALFFFVNNTIPPT-SATMGQLYE 96
>AF287012-1|AAK55962.1| 117|Homo sapiens early estrogen-regulated
protein protein.
Length = 117
Score = 33.9 bits (74), Expect = 0.49
Identities = 16/60 (26%), Positives = 30/60 (50%)
Frame = +1
Query: 211 QGNAPIMKKKKWAVDAEKPIGWIMEFVKKYLKLEADXKLFLYVNQTFAPSPDQIVRNLYE 390
+ P + K+K+ V ++ +G ++K + L + LF +VN T P+ + LYE
Sbjct: 38 KARVPDLDKRKYLVPSDLTVGQFYFLIRKRIHLRPEDALFFFVNNTIPPT-SATMGQLYE 96
>AF183425-1|AAG09694.1| 117|Homo sapiens HT004 protein protein.
Length = 117
Score = 33.9 bits (74), Expect = 0.49
Identities = 18/73 (24%), Positives = 33/73 (45%)
Frame = +1
Query: 229 MKKKKWAVDAEKPIGWIMEFVKKYLKLEADXKLFLYVNQTFAPSPDQIVRNLYECFGTDG 408
+ KKK+ V ++ +G ++K + L A+ LF +VN P+ + + E D
Sbjct: 44 LDKKKYLVPSDLTVGQFYFLIRKRIHLRAEDALFFFVNNVIPPTSATMGQLYQEHHEEDF 103
Query: 409 KLVLHYCKSQAWG 447
L + Y +G
Sbjct: 104 FLYIAYSDESVYG 116
>AF161586-1|AAD47641.1| 117|Homo sapiens GABA-A receptor-associated
protein protein.
Length = 117
Score = 33.9 bits (74), Expect = 0.49
Identities = 18/73 (24%), Positives = 33/73 (45%)
Frame = +1
Query: 229 MKKKKWAVDAEKPIGWIMEFVKKYLKLEADXKLFLYVNQTFAPSPDQIVRNLYECFGTDG 408
+ KKK+ V ++ +G ++K + L A+ LF +VN P+ + + E D
Sbjct: 44 LDKKKYLVPSDLTVGQFYFLIRKRIHLRAEDALFFFVNNVIPPTSATMGQLYQEHHEEDF 103
Query: 409 KLVLHYCKSQAWG 447
L + Y +G
Sbjct: 104 FLYIAYSDESVYG 116
>AF087847-1|AAK20399.1| 117|Homo sapiens GABA-A receptor-associated
protein like 1 protein.
Length = 117
Score = 33.9 bits (74), Expect = 0.49
Identities = 16/60 (26%), Positives = 30/60 (50%)
Frame = +1
Query: 211 QGNAPIMKKKKWAVDAEKPIGWIMEFVKKYLKLEADXKLFLYVNQTFAPSPDQIVRNLYE 390
+ P + K+K+ V ++ +G ++K + L + LF +VN T P+ + LYE
Sbjct: 38 KARVPDLDKRKYLVPSDLTVGQFYFLIRKRIHLRPEDALFFFVNNTIPPT-SATMGQLYE 96
>AF044671-1|AAD02337.1| 117|Homo sapiens MM46 protein.
Length = 117
Score = 33.9 bits (74), Expect = 0.49
Identities = 18/73 (24%), Positives = 33/73 (45%)
Frame = +1
Query: 229 MKKKKWAVDAEKPIGWIMEFVKKYLKLEADXKLFLYVNQTFAPSPDQIVRNLYECFGTDG 408
+ KKK+ V ++ +G ++K + L A+ LF +VN P+ + + E D
Sbjct: 44 LDKKKYLVPSDLTVGQFYFLIRKRIHLRAEDALFFFVNNVIPPTSATMGQLYQEHHEEDF 103
Query: 409 KLVLHYCKSQAWG 447
L + Y +G
Sbjct: 104 FLYIAYSDESVYG 116
>AB030711-1|BAB21549.1| 117|Homo sapiens MAP1 light chain 3 related
protein protein.
Length = 117
Score = 33.9 bits (74), Expect = 0.49
Identities = 18/73 (24%), Positives = 33/73 (45%)
Frame = +1
Query: 229 MKKKKWAVDAEKPIGWIMEFVKKYLKLEADXKLFLYVNQTFAPSPDQIVRNLYECFGTDG 408
+ KKK+ V ++ +G ++K + L A+ LF +VN P+ + + E D
Sbjct: 44 LDKKKYLVPSDLTVGQFYFLIRKRIHLRAEDALFFFVNNVIPPTSATMGQLYQEHHEEDF 103
Query: 409 KLVLHYCKSQAWG 447
L + Y +G
Sbjct: 104 FLYIAYSDESVYG 116
>BT007452-1|AAP36120.1| 121|Homo sapiens microtubule-associated
protein 1 light chain 3 alpha protein.
Length = 121
Score = 32.7 bits (71), Expect = 1.1
Identities = 20/82 (24%), Positives = 38/82 (46%), Gaps = 1/82 (1%)
Frame = +1
Query: 205 KRQGNAPIMKKKKWAVDAEKPIGWIMEFVKKYLKLEADXKLFLYVNQTFAPSPDQIVRNL 384
K + P++ K K+ V + +++ +++ L+L FL VNQ S + ++
Sbjct: 39 KGEKQLPVLDKTKFLVPDHVNMSELVKIIRRRLQLNPTQAFFLLVNQHSMVSVSTPIADI 98
Query: 385 YEC-FGTDGKLVLHYCKSQAWG 447
YE DG L + Y + +G
Sbjct: 99 YEQEKDEDGFLYMVYASQETFG 120
>BC015810-1|AAH15810.1| 121|Homo sapiens microtubule-associated
protein 1 light chain 3 alpha protein.
Length = 121
Score = 32.7 bits (71), Expect = 1.1
Identities = 20/82 (24%), Positives = 38/82 (46%), Gaps = 1/82 (1%)
Frame = +1
Query: 205 KRQGNAPIMKKKKWAVDAEKPIGWIMEFVKKYLKLEADXKLFLYVNQTFAPSPDQIVRNL 384
K + P++ K K+ V + +++ +++ L+L FL VNQ S + ++
Sbjct: 39 KGEKQLPVLDKTKFLVPDHVNMSELVKIIRRRLQLNPTQAFFLLVNQHSMVSVSTPIADI 98
Query: 385 YEC-FGTDGKLVLHYCKSQAWG 447
YE DG L + Y + +G
Sbjct: 99 YEQEKDEDGFLYMVYASQETFG 120
>AL118520-2|CAI40290.1| 121|Homo sapiens microtubule-associated
protein 1 light chain 3 alpha protein.
Length = 121
Score = 32.7 bits (71), Expect = 1.1
Identities = 20/82 (24%), Positives = 38/82 (46%), Gaps = 1/82 (1%)
Frame = +1
Query: 205 KRQGNAPIMKKKKWAVDAEKPIGWIMEFVKKYLKLEADXKLFLYVNQTFAPSPDQIVRNL 384
K + P++ K K+ V + +++ +++ L+L FL VNQ S + ++
Sbjct: 39 KGEKQLPVLDKTKFLVPDHVNMSELVKIIRRRLQLNPTQAFFLLVNQHSMVSVSTPIADI 98
Query: 385 YEC-FGTDGKLVLHYCKSQAWG 447
YE DG L + Y + +G
Sbjct: 99 YEQEKDEDGFLYMVYASQETFG 120
>AL118520-1|CAC14078.1| 125|Homo sapiens microtubule-associated
protein 1 light chain 3 alpha protein.
Length = 125
Score = 32.7 bits (71), Expect = 1.1
Identities = 20/82 (24%), Positives = 38/82 (46%), Gaps = 1/82 (1%)
Frame = +1
Query: 205 KRQGNAPIMKKKKWAVDAEKPIGWIMEFVKKYLKLEADXKLFLYVNQTFAPSPDQIVRNL 384
K + P++ K K+ V + +++ +++ L+L FL VNQ S + ++
Sbjct: 43 KGEKQLPVLDKTKFLVPDHVNMSELVKIIRRRLQLNPTQAFFLLVNQHSMVSVSTPIADI 102
Query: 385 YEC-FGTDGKLVLHYCKSQAWG 447
YE DG L + Y + +G
Sbjct: 103 YEQEKDEDGFLYMVYASQETFG 124
>AF276658-1|AAK35151.1| 121|Homo sapiens MAP1 light chain 3-like
protein 1 protein.
Length = 121
Score = 32.7 bits (71), Expect = 1.1
Identities = 20/82 (24%), Positives = 38/82 (46%), Gaps = 1/82 (1%)
Frame = +1
Query: 205 KRQGNAPIMKKKKWAVDAEKPIGWIMEFVKKYLKLEADXKLFLYVNQTFAPSPDQIVRNL 384
K + P++ K K+ V + +++ +++ L+L FL VNQ S + ++
Sbjct: 39 KGEKQLPVLDKTKFLVPDHVNMSELVKIIRRRLQLNPTQAFFLLVNQHSMVSVSTPIADI 98
Query: 385 YEC-FGTDGKLVLHYCKSQAWG 447
YE DG L + Y + +G
Sbjct: 99 YEQEKDEDGFLYMVYASQETFG 120
>CR542217-1|CAG47013.1| 117|Homo sapiens GABARAPL2 protein.
Length = 117
Score = 31.9 bits (69), Expect = 2.0
Identities = 19/72 (26%), Positives = 37/72 (51%), Gaps = 1/72 (1%)
Frame = +1
Query: 235 KKKWAVDAEKPIGWIMEFVKKYLKLEADXKLFLYVNQTFAPSPDQIVRNLYEC-FGTDGK 411
K+K+ V ++ + M ++K ++L ++ +FL+V++T P + LYE DG
Sbjct: 46 KRKYLVPSDITVAQFMWIIRKRIQLPSEKAIFLFVDKT-VPQSSLTMGQLYEKEKDEDGF 104
Query: 412 LVLHYCKSQAWG 447
L + Y +G
Sbjct: 105 LYVAYSGENTFG 116
>BC029601-1|AAH29601.1| 117|Homo sapiens GABA(A)
receptor-associated protein-like 2 protein.
Length = 117
Score = 31.9 bits (69), Expect = 2.0
Identities = 19/72 (26%), Positives = 37/72 (51%), Gaps = 1/72 (1%)
Frame = +1
Query: 235 KKKWAVDAEKPIGWIMEFVKKYLKLEADXKLFLYVNQTFAPSPDQIVRNLYEC-FGTDGK 411
K+K+ V ++ + M ++K ++L ++ +FL+V++T P + LYE DG
Sbjct: 46 KRKYLVPSDITVAQFMWIIRKRIQLPSEKAIFLFVDKT-VPQSSLTMGQLYEKEKDEDGF 104
Query: 412 LVLHYCKSQAWG 447
L + Y +G
Sbjct: 105 LYVAYSGENTFG 116
>BC014594-1|AAH14594.1| 117|Homo sapiens GABA(A)
receptor-associated protein-like 2 protein.
Length = 117
Score = 31.9 bits (69), Expect = 2.0
Identities = 19/72 (26%), Positives = 37/72 (51%), Gaps = 1/72 (1%)
Frame = +1
Query: 235 KKKWAVDAEKPIGWIMEFVKKYLKLEADXKLFLYVNQTFAPSPDQIVRNLYEC-FGTDGK 411
K+K+ V ++ + M ++K ++L ++ +FL+V++T P + LYE DG
Sbjct: 46 KRKYLVPSDITVAQFMWIIRKRIQLPSEKAIFLFVDKT-VPQSSLTMGQLYEKEKDEDGF 104
Query: 412 LVLHYCKSQAWG 447
L + Y +G
Sbjct: 105 LYVAYSGENTFG 116
>BC005985-1|AAH05985.1| 117|Homo sapiens GABA(A)
receptor-associated protein-like 2 protein.
Length = 117
Score = 31.9 bits (69), Expect = 2.0
Identities = 19/72 (26%), Positives = 37/72 (51%), Gaps = 1/72 (1%)
Frame = +1
Query: 235 KKKWAVDAEKPIGWIMEFVKKYLKLEADXKLFLYVNQTFAPSPDQIVRNLYEC-FGTDGK 411
K+K+ V ++ + M ++K ++L ++ +FL+V++T P + LYE DG
Sbjct: 46 KRKYLVPSDITVAQFMWIIRKRIQLPSEKAIFLFVDKT-VPQSSLTMGQLYEKEKDEDGF 104
Query: 412 LVLHYCKSQAWG 447
L + Y +G
Sbjct: 105 LYVAYSGENTFG 116
>AJ010569-1|CAA09249.1| 117|Homo sapiens GEF-2 protein protein.
Length = 117
Score = 31.9 bits (69), Expect = 2.0
Identities = 19/72 (26%), Positives = 37/72 (51%), Gaps = 1/72 (1%)
Frame = +1
Query: 235 KKKWAVDAEKPIGWIMEFVKKYLKLEADXKLFLYVNQTFAPSPDQIVRNLYEC-FGTDGK 411
K+K+ V ++ + M ++K ++L ++ +FL+V++T P + LYE DG
Sbjct: 46 KRKYLVPSDITVAQFMWIIRKRIQLPSEKAIFLFVDKT-VPQSSLTMGQLYEKEKDEDGF 104
Query: 412 LVLHYCKSQAWG 447
L + Y +G
Sbjct: 105 LYVAYSGENTFG 116
>AF087848-1|AAK20400.1| 117|Homo sapiens GABA-A receptor-associated
protein like 2 protein.
Length = 117
Score = 31.9 bits (69), Expect = 2.0
Identities = 19/72 (26%), Positives = 37/72 (51%), Gaps = 1/72 (1%)
Frame = +1
Query: 235 KKKWAVDAEKPIGWIMEFVKKYLKLEADXKLFLYVNQTFAPSPDQIVRNLYEC-FGTDGK 411
K+K+ V ++ + M ++K ++L ++ +FL+V++T P + LYE DG
Sbjct: 46 KRKYLVPSDITVAQFMWIIRKRIQLPSEKAIFLFVDKT-VPQSSLTMGQLYEKEKDEDGF 104
Query: 412 LVLHYCKSQAWG 447
L + Y +G
Sbjct: 105 LYVAYSGENTFG 116
>AB030710-1|BAB21548.1| 117|Homo sapiens MAP1 light chain 3 related
protein protein.
Length = 117
Score = 31.9 bits (69), Expect = 2.0
Identities = 19/72 (26%), Positives = 37/72 (51%), Gaps = 1/72 (1%)
Frame = +1
Query: 235 KKKWAVDAEKPIGWIMEFVKKYLKLEADXKLFLYVNQTFAPSPDQIVRNLYEC-FGTDGK 411
K+K+ V ++ + M ++K ++L ++ +FL+V++T P + LYE DG
Sbjct: 46 KRKYLVPSDITVAQFMWIIRKRIQLPSEKAIFLFVDKT-VPQSSLTMGQLYEKEKDEDGF 104
Query: 412 LVLHYCKSQAWG 447
L + Y +G
Sbjct: 105 LYVAYSGENTFG 116
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 82,271,497
Number of Sequences: 237096
Number of extensions: 1490178
Number of successful extensions: 2398
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 2355
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2398
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7085195460
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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