Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP02_F_M13
(574 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U28732-2|AAB04902.1| 136|Caenorhabditis elegans Histone protein... 273 5e-74
Z98866-6|CAB11546.1| 136|Caenorhabditis elegans Hypothetical pr... 272 1e-73
Z93388-9|CAB07653.1| 136|Caenorhabditis elegans Hypothetical pr... 262 1e-70
Z83245-7|CAB05834.1| 136|Caenorhabditis elegans Hypothetical pr... 262 1e-70
Z83245-3|CAB05833.1| 136|Caenorhabditis elegans Hypothetical pr... 262 1e-70
Z83245-2|CAB05831.1| 136|Caenorhabditis elegans Hypothetical pr... 262 1e-70
Z82271-1|CAB05209.1| 136|Caenorhabditis elegans Hypothetical pr... 262 1e-70
Z81495-3|CAB04057.1| 136|Caenorhabditis elegans Hypothetical pr... 262 1e-70
Z73102-11|CAA97411.1| 136|Caenorhabditis elegans Hypothetical p... 262 1e-70
Z68336-2|CAA92733.1| 136|Caenorhabditis elegans Hypothetical pr... 262 1e-70
X15634-2|CAA33644.1| 136|Caenorhabditis elegans Histone protein... 262 1e-70
U64845-9|AAC48033.1| 136|Caenorhabditis elegans Histone protein... 262 1e-70
U64843-9|AAF98226.1| 136|Caenorhabditis elegans Histone protein... 262 1e-70
U64843-4|AAF98231.1| 136|Caenorhabditis elegans Histone protein... 262 1e-70
U58750-10|AAB00650.1| 136|Caenorhabditis elegans Histone protei... 262 1e-70
AF304122-1|AAG50235.1| 136|Caenorhabditis elegans histone H3 pr... 262 1e-70
AF047656-3|AAC05102.1| 136|Caenorhabditis elegans Histone prote... 262 1e-70
AC024696-4|AAK84514.1| 136|Caenorhabditis elegans Histone prote... 262 1e-70
Z74476-1|CAA98963.1| 136|Caenorhabditis elegans Hypothetical pr... 255 2e-68
Z38112-1|CAA86228.1| 127|Caenorhabditis elegans Hypothetical pr... 222 2e-58
Z38112-2|CAA86229.1| 126|Caenorhabditis elegans Hypothetical pr... 195 2e-50
Z22179-3|CAA80160.1| 288|Caenorhabditis elegans Hypothetical pr... 112 2e-25
U50301-4|AAB37052.1| 118|Caenorhabditis elegans Hypothetical pr... 110 8e-25
Z22178-2|CAA80154.1| 261|Caenorhabditis elegans Hypothetical pr... 106 1e-23
Z81077-10|CAB03064.1| 151|Caenorhabditis elegans Hypothetical p... 31 0.58
Z83127-4|CAB05631.1| 872|Caenorhabditis elegans Hypothetical pr... 29 1.8
Z29443-1|CAA82576.1| 649|Caenorhabditis elegans Hypothetical pr... 29 2.3
U41549-2|AAA83282.1| 208|Caenorhabditis elegans Histone h1 like... 29 3.1
AF012253-1|AAB66471.1| 208|Caenorhabditis elegans histone H1.3 ... 29 3.1
Z81038-14|CAI79153.1| 696|Caenorhabditis elegans Hypothetical p... 28 5.4
Z81038-13|CAB02755.1| 971|Caenorhabditis elegans Hypothetical p... 28 5.4
Z29443-2|CAA82581.1| 648|Caenorhabditis elegans Hypothetical pr... 28 5.4
>U28732-2|AAB04902.1| 136|Caenorhabditis elegans Histone protein 71
protein.
Length = 136
Score = 273 bits (670), Expect = 5e-74
Identities = 134/136 (98%), Positives = 136/136 (100%)
Frame = +1
Query: 40 LARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTE 219
+ARTKQTARKSTGGKAPRKQLATKAARKSAP+TGGVKKPHRYRPGTVALREIRRYQKSTE
Sbjct: 1 MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRRYQKSTE 60
Query: 220 LLIRKLPFQRLVREIAQDFKTDLRFQSAAIGALQEASEAYLVGLFEDTNLCAIHAKRVTI 399
LLIRKLPFQRLVREIAQDFKTDLRFQSAAIGALQEASEAYLVGLFEDTNLCAIHAKRVTI
Sbjct: 61 LLIRKLPFQRLVREIAQDFKTDLRFQSAAIGALQEASEAYLVGLFEDTNLCAIHAKRVTI 120
Query: 400 MPKDIQLARRIRGERA 447
MPKDIQLARRIRGERA
Sbjct: 121 MPKDIQLARRIRGERA 136
>Z98866-6|CAB11546.1| 136|Caenorhabditis elegans Hypothetical
protein Y49E10.6 protein.
Length = 136
Score = 272 bits (667), Expect = 1e-73
Identities = 133/136 (97%), Positives = 136/136 (100%)
Frame = +1
Query: 40 LARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTE 219
+ARTKQTARKSTGGKAPRKQLATKAARKSAP+TGGVKKPHRYRPGTVALREIRRYQKSTE
Sbjct: 1 MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRRYQKSTE 60
Query: 220 LLIRKLPFQRLVREIAQDFKTDLRFQSAAIGALQEASEAYLVGLFEDTNLCAIHAKRVTI 399
LLIRKLPFQRLVREIAQDFKTDLRFQSAAIGALQEASEAYLVGLFEDTNLCAIHAKRVTI
Sbjct: 61 LLIRKLPFQRLVREIAQDFKTDLRFQSAAIGALQEASEAYLVGLFEDTNLCAIHAKRVTI 120
Query: 400 MPKDIQLARRIRGERA 447
MPKD+QLARRIRGERA
Sbjct: 121 MPKDMQLARRIRGERA 136
>Z93388-9|CAB07653.1| 136|Caenorhabditis elegans Hypothetical
protein T10C6.13 protein.
Length = 136
Score = 262 bits (642), Expect = 1e-70
Identities = 127/136 (93%), Positives = 134/136 (98%)
Frame = +1
Query: 40 LARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTE 219
+ARTKQTARKSTGGKAPRKQLATKAARKSAP++GGVKKPHRYRPGTVALREIRRYQKSTE
Sbjct: 1 MARTKQTARKSTGGKAPRKQLATKAARKSAPASGGVKKPHRYRPGTVALREIRRYQKSTE 60
Query: 220 LLIRKLPFQRLVREIAQDFKTDLRFQSAAIGALQEASEAYLVGLFEDTNLCAIHAKRVTI 399
LLIR+ PFQRLVREIAQDFKTDLRFQS+A+ ALQEA+EAYLVGLFEDTNLCAIHAKRVTI
Sbjct: 61 LLIRRAPFQRLVREIAQDFKTDLRFQSSAVMALQEAAEAYLVGLFEDTNLCAIHAKRVTI 120
Query: 400 MPKDIQLARRIRGERA 447
MPKDIQLARRIRGERA
Sbjct: 121 MPKDIQLARRIRGERA 136
>Z83245-7|CAB05834.1| 136|Caenorhabditis elegans Hypothetical
protein ZK131.7 protein.
Length = 136
Score = 262 bits (642), Expect = 1e-70
Identities = 127/136 (93%), Positives = 134/136 (98%)
Frame = +1
Query: 40 LARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTE 219
+ARTKQTARKSTGGKAPRKQLATKAARKSAP++GGVKKPHRYRPGTVALREIRRYQKSTE
Sbjct: 1 MARTKQTARKSTGGKAPRKQLATKAARKSAPASGGVKKPHRYRPGTVALREIRRYQKSTE 60
Query: 220 LLIRKLPFQRLVREIAQDFKTDLRFQSAAIGALQEASEAYLVGLFEDTNLCAIHAKRVTI 399
LLIR+ PFQRLVREIAQDFKTDLRFQS+A+ ALQEA+EAYLVGLFEDTNLCAIHAKRVTI
Sbjct: 61 LLIRRAPFQRLVREIAQDFKTDLRFQSSAVMALQEAAEAYLVGLFEDTNLCAIHAKRVTI 120
Query: 400 MPKDIQLARRIRGERA 447
MPKDIQLARRIRGERA
Sbjct: 121 MPKDIQLARRIRGERA 136
>Z83245-3|CAB05833.1| 136|Caenorhabditis elegans Hypothetical
protein ZK131.3 protein.
Length = 136
Score = 262 bits (642), Expect = 1e-70
Identities = 127/136 (93%), Positives = 134/136 (98%)
Frame = +1
Query: 40 LARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTE 219
+ARTKQTARKSTGGKAPRKQLATKAARKSAP++GGVKKPHRYRPGTVALREIRRYQKSTE
Sbjct: 1 MARTKQTARKSTGGKAPRKQLATKAARKSAPASGGVKKPHRYRPGTVALREIRRYQKSTE 60
Query: 220 LLIRKLPFQRLVREIAQDFKTDLRFQSAAIGALQEASEAYLVGLFEDTNLCAIHAKRVTI 399
LLIR+ PFQRLVREIAQDFKTDLRFQS+A+ ALQEA+EAYLVGLFEDTNLCAIHAKRVTI
Sbjct: 61 LLIRRAPFQRLVREIAQDFKTDLRFQSSAVMALQEAAEAYLVGLFEDTNLCAIHAKRVTI 120
Query: 400 MPKDIQLARRIRGERA 447
MPKDIQLARRIRGERA
Sbjct: 121 MPKDIQLARRIRGERA 136
>Z83245-2|CAB05831.1| 136|Caenorhabditis elegans Hypothetical
protein ZK131.2 protein.
Length = 136
Score = 262 bits (642), Expect = 1e-70
Identities = 127/136 (93%), Positives = 134/136 (98%)
Frame = +1
Query: 40 LARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTE 219
+ARTKQTARKSTGGKAPRKQLATKAARKSAP++GGVKKPHRYRPGTVALREIRRYQKSTE
Sbjct: 1 MARTKQTARKSTGGKAPRKQLATKAARKSAPASGGVKKPHRYRPGTVALREIRRYQKSTE 60
Query: 220 LLIRKLPFQRLVREIAQDFKTDLRFQSAAIGALQEASEAYLVGLFEDTNLCAIHAKRVTI 399
LLIR+ PFQRLVREIAQDFKTDLRFQS+A+ ALQEA+EAYLVGLFEDTNLCAIHAKRVTI
Sbjct: 61 LLIRRAPFQRLVREIAQDFKTDLRFQSSAVMALQEAAEAYLVGLFEDTNLCAIHAKRVTI 120
Query: 400 MPKDIQLARRIRGERA 447
MPKDIQLARRIRGERA
Sbjct: 121 MPKDIQLARRIRGERA 136
>Z82271-1|CAB05209.1| 136|Caenorhabditis elegans Hypothetical
protein F54E12.1 protein.
Length = 136
Score = 262 bits (642), Expect = 1e-70
Identities = 127/136 (93%), Positives = 134/136 (98%)
Frame = +1
Query: 40 LARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTE 219
+ARTKQTARKSTGGKAPRKQLATKAARKSAP++GGVKKPHRYRPGTVALREIRRYQKSTE
Sbjct: 1 MARTKQTARKSTGGKAPRKQLATKAARKSAPASGGVKKPHRYRPGTVALREIRRYQKSTE 60
Query: 220 LLIRKLPFQRLVREIAQDFKTDLRFQSAAIGALQEASEAYLVGLFEDTNLCAIHAKRVTI 399
LLIR+ PFQRLVREIAQDFKTDLRFQS+A+ ALQEA+EAYLVGLFEDTNLCAIHAKRVTI
Sbjct: 61 LLIRRAPFQRLVREIAQDFKTDLRFQSSAVMALQEAAEAYLVGLFEDTNLCAIHAKRVTI 120
Query: 400 MPKDIQLARRIRGERA 447
MPKDIQLARRIRGERA
Sbjct: 121 MPKDIQLARRIRGERA 136
>Z81495-3|CAB04057.1| 136|Caenorhabditis elegans Hypothetical
protein F08G2.3 protein.
Length = 136
Score = 262 bits (642), Expect = 1e-70
Identities = 127/136 (93%), Positives = 134/136 (98%)
Frame = +1
Query: 40 LARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTE 219
+ARTKQTARKSTGGKAPRKQLATKAARKSAP++GGVKKPHRYRPGTVALREIRRYQKSTE
Sbjct: 1 MARTKQTARKSTGGKAPRKQLATKAARKSAPASGGVKKPHRYRPGTVALREIRRYQKSTE 60
Query: 220 LLIRKLPFQRLVREIAQDFKTDLRFQSAAIGALQEASEAYLVGLFEDTNLCAIHAKRVTI 399
LLIR+ PFQRLVREIAQDFKTDLRFQS+A+ ALQEA+EAYLVGLFEDTNLCAIHAKRVTI
Sbjct: 61 LLIRRAPFQRLVREIAQDFKTDLRFQSSAVMALQEAAEAYLVGLFEDTNLCAIHAKRVTI 120
Query: 400 MPKDIQLARRIRGERA 447
MPKDIQLARRIRGERA
Sbjct: 121 MPKDIQLARRIRGERA 136
>Z73102-11|CAA97411.1| 136|Caenorhabditis elegans Hypothetical
protein B0035.10 protein.
Length = 136
Score = 262 bits (642), Expect = 1e-70
Identities = 127/136 (93%), Positives = 134/136 (98%)
Frame = +1
Query: 40 LARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTE 219
+ARTKQTARKSTGGKAPRKQLATKAARKSAP++GGVKKPHRYRPGTVALREIRRYQKSTE
Sbjct: 1 MARTKQTARKSTGGKAPRKQLATKAARKSAPASGGVKKPHRYRPGTVALREIRRYQKSTE 60
Query: 220 LLIRKLPFQRLVREIAQDFKTDLRFQSAAIGALQEASEAYLVGLFEDTNLCAIHAKRVTI 399
LLIR+ PFQRLVREIAQDFKTDLRFQS+A+ ALQEA+EAYLVGLFEDTNLCAIHAKRVTI
Sbjct: 61 LLIRRAPFQRLVREIAQDFKTDLRFQSSAVMALQEAAEAYLVGLFEDTNLCAIHAKRVTI 120
Query: 400 MPKDIQLARRIRGERA 447
MPKDIQLARRIRGERA
Sbjct: 121 MPKDIQLARRIRGERA 136
>Z68336-2|CAA92733.1| 136|Caenorhabditis elegans Hypothetical
protein F22B3.2 protein.
Length = 136
Score = 262 bits (642), Expect = 1e-70
Identities = 127/136 (93%), Positives = 134/136 (98%)
Frame = +1
Query: 40 LARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTE 219
+ARTKQTARKSTGGKAPRKQLATKAARKSAP++GGVKKPHRYRPGTVALREIRRYQKSTE
Sbjct: 1 MARTKQTARKSTGGKAPRKQLATKAARKSAPASGGVKKPHRYRPGTVALREIRRYQKSTE 60
Query: 220 LLIRKLPFQRLVREIAQDFKTDLRFQSAAIGALQEASEAYLVGLFEDTNLCAIHAKRVTI 399
LLIR+ PFQRLVREIAQDFKTDLRFQS+A+ ALQEA+EAYLVGLFEDTNLCAIHAKRVTI
Sbjct: 61 LLIRRAPFQRLVREIAQDFKTDLRFQSSAVMALQEAAEAYLVGLFEDTNLCAIHAKRVTI 120
Query: 400 MPKDIQLARRIRGERA 447
MPKDIQLARRIRGERA
Sbjct: 121 MPKDIQLARRIRGERA 136
>X15634-2|CAA33644.1| 136|Caenorhabditis elegans Histone protein
protein.
Length = 136
Score = 262 bits (642), Expect = 1e-70
Identities = 127/136 (93%), Positives = 134/136 (98%)
Frame = +1
Query: 40 LARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTE 219
+ARTKQTARKSTGGKAPRKQLATKAARKSAP++GGVKKPHRYRPGTVALREIRRYQKSTE
Sbjct: 1 MARTKQTARKSTGGKAPRKQLATKAARKSAPASGGVKKPHRYRPGTVALREIRRYQKSTE 60
Query: 220 LLIRKLPFQRLVREIAQDFKTDLRFQSAAIGALQEASEAYLVGLFEDTNLCAIHAKRVTI 399
LLIR+ PFQRLVREIAQDFKTDLRFQS+A+ ALQEA+EAYLVGLFEDTNLCAIHAKRVTI
Sbjct: 61 LLIRRAPFQRLVREIAQDFKTDLRFQSSAVMALQEAAEAYLVGLFEDTNLCAIHAKRVTI 120
Query: 400 MPKDIQLARRIRGERA 447
MPKDIQLARRIRGERA
Sbjct: 121 MPKDIQLARRIRGERA 136
>U64845-9|AAC48033.1| 136|Caenorhabditis elegans Histone protein 6
protein.
Length = 136
Score = 262 bits (642), Expect = 1e-70
Identities = 127/136 (93%), Positives = 134/136 (98%)
Frame = +1
Query: 40 LARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTE 219
+ARTKQTARKSTGGKAPRKQLATKAARKSAP++GGVKKPHRYRPGTVALREIRRYQKSTE
Sbjct: 1 MARTKQTARKSTGGKAPRKQLATKAARKSAPASGGVKKPHRYRPGTVALREIRRYQKSTE 60
Query: 220 LLIRKLPFQRLVREIAQDFKTDLRFQSAAIGALQEASEAYLVGLFEDTNLCAIHAKRVTI 399
LLIR+ PFQRLVREIAQDFKTDLRFQS+A+ ALQEA+EAYLVGLFEDTNLCAIHAKRVTI
Sbjct: 61 LLIRRAPFQRLVREIAQDFKTDLRFQSSAVMALQEAAEAYLVGLFEDTNLCAIHAKRVTI 120
Query: 400 MPKDIQLARRIRGERA 447
MPKDIQLARRIRGERA
Sbjct: 121 MPKDIQLARRIRGERA 136
>U64843-9|AAF98226.1| 136|Caenorhabditis elegans Histone protein 17
protein.
Length = 136
Score = 262 bits (642), Expect = 1e-70
Identities = 127/136 (93%), Positives = 134/136 (98%)
Frame = +1
Query: 40 LARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTE 219
+ARTKQTARKSTGGKAPRKQLATKAARKSAP++GGVKKPHRYRPGTVALREIRRYQKSTE
Sbjct: 1 MARTKQTARKSTGGKAPRKQLATKAARKSAPASGGVKKPHRYRPGTVALREIRRYQKSTE 60
Query: 220 LLIRKLPFQRLVREIAQDFKTDLRFQSAAIGALQEASEAYLVGLFEDTNLCAIHAKRVTI 399
LLIR+ PFQRLVREIAQDFKTDLRFQS+A+ ALQEA+EAYLVGLFEDTNLCAIHAKRVTI
Sbjct: 61 LLIRRAPFQRLVREIAQDFKTDLRFQSSAVMALQEAAEAYLVGLFEDTNLCAIHAKRVTI 120
Query: 400 MPKDIQLARRIRGERA 447
MPKDIQLARRIRGERA
Sbjct: 121 MPKDIQLARRIRGERA 136
>U64843-4|AAF98231.1| 136|Caenorhabditis elegans Histone protein 27
protein.
Length = 136
Score = 262 bits (642), Expect = 1e-70
Identities = 127/136 (93%), Positives = 134/136 (98%)
Frame = +1
Query: 40 LARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTE 219
+ARTKQTARKSTGGKAPRKQLATKAARKSAP++GGVKKPHRYRPGTVALREIRRYQKSTE
Sbjct: 1 MARTKQTARKSTGGKAPRKQLATKAARKSAPASGGVKKPHRYRPGTVALREIRRYQKSTE 60
Query: 220 LLIRKLPFQRLVREIAQDFKTDLRFQSAAIGALQEASEAYLVGLFEDTNLCAIHAKRVTI 399
LLIR+ PFQRLVREIAQDFKTDLRFQS+A+ ALQEA+EAYLVGLFEDTNLCAIHAKRVTI
Sbjct: 61 LLIRRAPFQRLVREIAQDFKTDLRFQSSAVMALQEAAEAYLVGLFEDTNLCAIHAKRVTI 120
Query: 400 MPKDIQLARRIRGERA 447
MPKDIQLARRIRGERA
Sbjct: 121 MPKDIQLARRIRGERA 136
>U58750-10|AAB00650.1| 136|Caenorhabditis elegans Histone protein
59 protein.
Length = 136
Score = 262 bits (642), Expect = 1e-70
Identities = 127/136 (93%), Positives = 134/136 (98%)
Frame = +1
Query: 40 LARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTE 219
+ARTKQTARKSTGGKAPRKQLATKAARKSAP++GGVKKPHRYRPGTVALREIRRYQKSTE
Sbjct: 1 MARTKQTARKSTGGKAPRKQLATKAARKSAPASGGVKKPHRYRPGTVALREIRRYQKSTE 60
Query: 220 LLIRKLPFQRLVREIAQDFKTDLRFQSAAIGALQEASEAYLVGLFEDTNLCAIHAKRVTI 399
LLIR+ PFQRLVREIAQDFKTDLRFQS+A+ ALQEA+EAYLVGLFEDTNLCAIHAKRVTI
Sbjct: 61 LLIRRAPFQRLVREIAQDFKTDLRFQSSAVMALQEAAEAYLVGLFEDTNLCAIHAKRVTI 120
Query: 400 MPKDIQLARRIRGERA 447
MPKDIQLARRIRGERA
Sbjct: 121 MPKDIQLARRIRGERA 136
>AF304122-1|AAG50235.1| 136|Caenorhabditis elegans histone H3
protein.
Length = 136
Score = 262 bits (642), Expect = 1e-70
Identities = 127/136 (93%), Positives = 134/136 (98%)
Frame = +1
Query: 40 LARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTE 219
+ARTKQTARKSTGGKAPRKQLATKAARKSAP++GGVKKPHRYRPGTVALREIRRYQKSTE
Sbjct: 1 MARTKQTARKSTGGKAPRKQLATKAARKSAPASGGVKKPHRYRPGTVALREIRRYQKSTE 60
Query: 220 LLIRKLPFQRLVREIAQDFKTDLRFQSAAIGALQEASEAYLVGLFEDTNLCAIHAKRVTI 399
LLIR+ PFQRLVREIAQDFKTDLRFQS+A+ ALQEA+EAYLVGLFEDTNLCAIHAKRVTI
Sbjct: 61 LLIRRAPFQRLVREIAQDFKTDLRFQSSAVMALQEAAEAYLVGLFEDTNLCAIHAKRVTI 120
Query: 400 MPKDIQLARRIRGERA 447
MPKDIQLARRIRGERA
Sbjct: 121 MPKDIQLARRIRGERA 136
>AF047656-3|AAC05102.1| 136|Caenorhabditis elegans Histone protein
32 protein.
Length = 136
Score = 262 bits (642), Expect = 1e-70
Identities = 127/136 (93%), Positives = 134/136 (98%)
Frame = +1
Query: 40 LARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTE 219
+ARTKQTARKSTGGKAPRKQLATKAARKSAP++GGVKKPHRYRPGTVALREIRRYQKSTE
Sbjct: 1 MARTKQTARKSTGGKAPRKQLATKAARKSAPASGGVKKPHRYRPGTVALREIRRYQKSTE 60
Query: 220 LLIRKLPFQRLVREIAQDFKTDLRFQSAAIGALQEASEAYLVGLFEDTNLCAIHAKRVTI 399
LLIR+ PFQRLVREIAQDFKTDLRFQS+A+ ALQEA+EAYLVGLFEDTNLCAIHAKRVTI
Sbjct: 61 LLIRRAPFQRLVREIAQDFKTDLRFQSSAVMALQEAAEAYLVGLFEDTNLCAIHAKRVTI 120
Query: 400 MPKDIQLARRIRGERA 447
MPKDIQLARRIRGERA
Sbjct: 121 MPKDIQLARRIRGERA 136
>AC024696-4|AAK84514.1| 136|Caenorhabditis elegans Histone protein
49 protein.
Length = 136
Score = 262 bits (642), Expect = 1e-70
Identities = 127/136 (93%), Positives = 134/136 (98%)
Frame = +1
Query: 40 LARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTE 219
+ARTKQTARKSTGGKAPRKQLATKAARKSAP++GGVKKPHRYRPGTVALREIRRYQKSTE
Sbjct: 1 MARTKQTARKSTGGKAPRKQLATKAARKSAPASGGVKKPHRYRPGTVALREIRRYQKSTE 60
Query: 220 LLIRKLPFQRLVREIAQDFKTDLRFQSAAIGALQEASEAYLVGLFEDTNLCAIHAKRVTI 399
LLIR+ PFQRLVREIAQDFKTDLRFQS+A+ ALQEA+EAYLVGLFEDTNLCAIHAKRVTI
Sbjct: 61 LLIRRAPFQRLVREIAQDFKTDLRFQSSAVMALQEAAEAYLVGLFEDTNLCAIHAKRVTI 120
Query: 400 MPKDIQLARRIRGERA 447
MPKDIQLARRIRGERA
Sbjct: 121 MPKDIQLARRIRGERA 136
>Z74476-1|CAA98963.1| 136|Caenorhabditis elegans Hypothetical
protein W05B10.1 protein.
Length = 136
Score = 255 bits (624), Expect = 2e-68
Identities = 126/136 (92%), Positives = 131/136 (96%)
Frame = +1
Query: 40 LARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTE 219
+ARTKQTARKSTGGKAPRK LATKAARKSA TG VKK HR+RPGTVALREIRRYQKSTE
Sbjct: 1 MARTKQTARKSTGGKAPRKALATKAARKSAIVTGSVKKVHRFRPGTVALREIRRYQKSTE 60
Query: 220 LLIRKLPFQRLVREIAQDFKTDLRFQSAAIGALQEASEAYLVGLFEDTNLCAIHAKRVTI 399
LL+RKLPFQRLVREIAQDFKTDLRFQSAAIGALQEASEAYLVGLFEDTNLCAIHAKRVTI
Sbjct: 61 LLLRKLPFQRLVREIAQDFKTDLRFQSAAIGALQEASEAYLVGLFEDTNLCAIHAKRVTI 120
Query: 400 MPKDIQLARRIRGERA 447
MPKD+QLARRIRGER+
Sbjct: 121 MPKDMQLARRIRGERS 136
>Z38112-1|CAA86228.1| 127|Caenorhabditis elegans Hypothetical
protein E03A3.3 protein.
Length = 127
Score = 222 bits (542), Expect = 2e-58
Identities = 109/123 (88%), Positives = 115/123 (93%)
Frame = +1
Query: 76 GGKAPRKQLATKAARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLV 255
GGKAPRKQLATKAARK+A G VKKPHR+RPGTVALREIRRYQKST+LL+RKLPFQRLV
Sbjct: 4 GGKAPRKQLATKAARKNAIVVGAVKKPHRFRPGTVALREIRRYQKSTDLLLRKLPFQRLV 63
Query: 256 REIAQDFKTDLRFQSAAIGALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIR 435
REIAQD K DLRFQSAAI ALQEASE +LVGLFEDTNLCAIHAKRVTIMPKD+QLARRIR
Sbjct: 64 REIAQDVKQDLRFQSAAIQALQEASEYFLVGLFEDTNLCAIHAKRVTIMPKDMQLARRIR 123
Query: 436 GER 444
GER
Sbjct: 124 GER 126
>Z38112-2|CAA86229.1| 126|Caenorhabditis elegans Hypothetical
protein E03A3.4 protein.
Length = 126
Score = 195 bits (475), Expect = 2e-50
Identities = 97/127 (76%), Positives = 110/127 (86%)
Frame = +1
Query: 40 LARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTE 219
+ARTK TARKS GGKAPRK LATKAARK P G VKK RYRP + AL+EIR+YQKSTE
Sbjct: 1 MARTKHTARKSFGGKAPRKSLATKAARKVFPVDGQVKK--RYRPSSNALKEIRKYQKSTE 58
Query: 220 LLIRKLPFQRLVREIAQDFKTDLRFQSAAIGALQEASEAYLVGLFEDTNLCAIHAKRVTI 399
LL+RKLPFQRLVRE+AQ+ ++RFQSAAI AL EA+EAYL+GLFEDTNLCAIHAKRVTI
Sbjct: 59 LLVRKLPFQRLVREVAQEIMPNVRFQSAAIQALHEAAEAYLIGLFEDTNLCAIHAKRVTI 118
Query: 400 MPKDIQL 420
MPKD+Q+
Sbjct: 119 MPKDMQV 125
>Z22179-3|CAA80160.1| 288|Caenorhabditis elegans Hypothetical
protein F58A4.3 protein.
Length = 288
Score = 112 bits (269), Expect = 2e-25
Identities = 59/99 (59%), Positives = 72/99 (72%), Gaps = 3/99 (3%)
Frame = +1
Query: 145 VKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQD---FKTDLRFQSAAIGA 315
V K RYRPG AL EIR+YQK+ +LLI+K PF RLVREI Q F D R +S AI A
Sbjct: 185 VTKTRRYRPGQKALEEIRKYQKTEDLLIQKAPFARLVREIMQTSTPFGADCRIRSDAISA 244
Query: 316 LQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRI 432
LQEA+EA+LV +FE ++L + HAKRVT+M DIQL RR+
Sbjct: 245 LQEAAEAFLVEMFEGSSLISTHAKRVTLMTTDIQLYRRL 283
>U50301-4|AAB37052.1| 118|Caenorhabditis elegans Hypothetical
protein F20D6.9 protein.
Length = 118
Score = 110 bits (264), Expect = 8e-25
Identities = 58/97 (59%), Positives = 71/97 (73%)
Frame = +1
Query: 151 KPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSAAIGALQEAS 330
+ + + GTVALREIR+ Q+STELLI + F+RLV+E+AQDF TDL F+ AI ALQ A
Sbjct: 20 RSYPFHSGTVALREIRKQQQSTELLIPRSRFERLVKELAQDFVTDLIFRKDAIDALQAAV 79
Query: 331 EAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGE 441
E YLV LF NLCAI KRVTI +++ ARRIRGE
Sbjct: 80 EDYLVELFRLGNLCAIKCKRVTIEADNLKFARRIRGE 116
>Z22178-2|CAA80154.1| 261|Caenorhabditis elegans Hypothetical
protein F54C8.2 protein.
Length = 261
Score = 106 bits (255), Expect = 1e-23
Identities = 55/99 (55%), Positives = 70/99 (70%), Gaps = 3/99 (3%)
Frame = +1
Query: 145 VKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQD---FKTDLRFQSAAIGA 315
+ K RYRPG AL EIR+YQ+S +LLI K PF RLVREI Q F +DLR +S AI A
Sbjct: 158 ISKTRRYRPGQKALEEIRKYQESEDLLIPKAPFARLVREIMQTSTPFSSDLRIRSDAINA 217
Query: 316 LQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRI 432
LQEASEA LV +F+ ++L + H+KR T+ D+QL RR+
Sbjct: 218 LQEASEALLVQMFDGSSLISAHSKRATLTTTDVQLYRRL 256
>Z81077-10|CAB03064.1| 151|Caenorhabditis elegans Hypothetical
protein F36A2.10 protein.
Length = 151
Score = 31.1 bits (67), Expect = 0.58
Identities = 15/36 (41%), Positives = 24/36 (66%), Gaps = 2/36 (5%)
Frame = +1
Query: 31 SKQLARTKQTARKSTGGK--APRKQLATKAARKSAP 132
++ +R++ +R ST GK AP+K + TKAAR +P
Sbjct: 90 TRSRSRSRSRSRSSTRGKKRAPKKAVTTKAARSISP 125
>Z83127-4|CAB05631.1| 872|Caenorhabditis elegans Hypothetical
protein T23F6.4 protein.
Length = 872
Score = 29.5 bits (63), Expect = 1.8
Identities = 13/39 (33%), Positives = 26/39 (66%), Gaps = 2/39 (5%)
Frame = +1
Query: 172 GTVALREIRRYQKS--TELLIRKLPFQRLVREIAQDFKT 282
G + +E+++ ++ T+LL+R LPF+ V+E+ F+T
Sbjct: 732 GALKRKEVKQKEQGECTKLLVRNLPFEASVKEVETLFET 770
>Z29443-1|CAA82576.1| 649|Caenorhabditis elegans Hypothetical
protein T07C4.3a protein.
Length = 649
Score = 29.1 bits (62), Expect = 2.3
Identities = 17/64 (26%), Positives = 32/64 (50%)
Frame = -2
Query: 375 STQVGVFEQANEISLACLLESSDGGRLETQISFEILSDFSHKTLERQLTDKQLSRLLITT 196
ST G F+ + + ++ S G+ + ++ L HK +RQLT ++L+ + +
Sbjct: 33 STASGKFQPSVDGFTTFIVAVSRLGKQGQEFTWHDLRKVYHKETQRQLTAEELNAIFSSK 92
Query: 195 NFTK 184
N TK
Sbjct: 93 NLTK 96
>U41549-2|AAA83282.1| 208|Caenorhabditis elegans Histone h1 like
protein 3 protein.
Length = 208
Score = 28.7 bits (61), Expect = 3.1
Identities = 19/54 (35%), Positives = 26/54 (48%), Gaps = 7/54 (12%)
Frame = +1
Query: 16 EKH*KSKQLARTKQTARKSTGGKAPR-------KQLATKAARKSAPSTGGVKKP 156
EK K +TK+TA K K+P+ K++A A+KSAP KP
Sbjct: 146 EKKAKKTTATKTKKTADKVKKVKSPKKIAKPTAKKVAKSPAKKSAPKKAAAAKP 199
>AF012253-1|AAB66471.1| 208|Caenorhabditis elegans histone H1.3
protein.
Length = 208
Score = 28.7 bits (61), Expect = 3.1
Identities = 19/54 (35%), Positives = 26/54 (48%), Gaps = 7/54 (12%)
Frame = +1
Query: 16 EKH*KSKQLARTKQTARKSTGGKAPR-------KQLATKAARKSAPSTGGVKKP 156
EK K +TK+TA K K+P+ K++A A+KSAP KP
Sbjct: 146 EKKAKKTTATKTKKTADKVKKVKSPKKIAKPTAKKVAKSPAKKSAPKKAAAAKP 199
>Z81038-14|CAI79153.1| 696|Caenorhabditis elegans Hypothetical
protein C25A1.10b protein.
Length = 696
Score = 27.9 bits (59), Expect = 5.4
Identities = 17/48 (35%), Positives = 24/48 (50%)
Frame = +1
Query: 13 AEKH*KSKQLARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKP 156
++K S + ++ A KST K K A KAA S+ S+ KKP
Sbjct: 306 SKKAESSSDSSDDEKPAAKSTPAKTTPKPTAKKAASSSSDSSDDEKKP 353
>Z81038-13|CAB02755.1| 971|Caenorhabditis elegans Hypothetical
protein C25A1.10a protein.
Length = 971
Score = 27.9 bits (59), Expect = 5.4
Identities = 17/48 (35%), Positives = 24/48 (50%)
Frame = +1
Query: 13 AEKH*KSKQLARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKP 156
++K S + ++ A KST K K A KAA S+ S+ KKP
Sbjct: 581 SKKAESSSDSSDDEKPAAKSTPAKTTPKPTAKKAASSSSDSSDDEKKP 628
>Z29443-2|CAA82581.1| 648|Caenorhabditis elegans Hypothetical
protein T07C4.3b protein.
Length = 648
Score = 27.9 bits (59), Expect = 5.4
Identities = 17/64 (26%), Positives = 33/64 (51%)
Frame = -2
Query: 375 STQVGVFEQANEISLACLLESSDGGRLETQISFEILSDFSHKTLERQLTDKQLSRLLITT 196
ST G F+ ++ + ++ S G+ + ++ L HK +RQLT ++L+ + +
Sbjct: 33 STASGKFQPSDGFT-TFIVAVSRLGKQGQEFTWHDLRKVYHKETQRQLTAEELNAIFSSK 91
Query: 195 NFTK 184
N TK
Sbjct: 92 NLTK 95
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,602,690
Number of Sequences: 27780
Number of extensions: 223444
Number of successful extensions: 551
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 526
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 548
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1184216096
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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