Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP02_F_M09
(669 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF087660-1|AAD23566.1| 156|Homo sapiens NADH:ubiquinone oxidore... 116 6e-26
AC002400-1|AAC05814.1| 161|Homo sapiens Acyl carrier protein, M... 116 6e-26
BC058920-1|AAH58920.1| 156|Homo sapiens NADH dehydrogenase (ubi... 113 7e-25
EF036490-1|ABO65076.1| 124|Homo sapiens NADH:ubiquinone oxidore... 78 2e-14
M97806-1|AAB05630.2| 110|Homo sapiens immunoglobulin kappa ligh... 31 3.7
U51134-1|AAD05036.1| 148|Homo sapiens calcitonin gene-related p... 31 4.9
BC105808-1|AAI05809.1| 148|Homo sapiens calcitonin gene-related... 31 4.9
BC040107-1|AAH40107.1| 115|Homo sapiens calcitonin gene-related... 31 4.9
AF073792-1|AAC25992.1| 148|Homo sapiens CGRP-receptor component... 31 4.9
BC131735-1|AAI31736.1| 2371|Homo sapiens neuroblastoma-amplified... 30 6.5
BC051792-1|AAH51792.2| 1418|Homo sapiens NAG protein protein. 30 6.5
AL050281-1|CAB43382.1| 1296|Homo sapiens hypothetical protein pr... 30 6.5
AF388385-1|AAM93544.1| 2371|Homo sapiens neuroblastoma-amplified... 30 6.5
AF056195-1|AAD18133.1| 1352|Homo sapiens neuroblastoma-amplified... 30 6.5
AC008282-1|AAY24347.1| 1060|Homo sapiens unknown protein. 30 6.5
AY282406-1|AAP40330.1| 917|Homo sapiens M-phase phosphoprotein ... 30 8.6
AL157400-5|CAI16831.1| 1780|Homo sapiens M-phase phosphoprotein ... 30 8.6
AL157389-2|CAI12887.1| 1780|Homo sapiens M-phase phosphoprotein ... 30 8.6
>AF087660-1|AAD23566.1| 156|Homo sapiens NADH:ubiquinone
oxidoreductase SDAP subunit protein.
Length = 156
Score = 116 bits (280), Expect = 6e-26
Identities = 65/146 (44%), Positives = 92/146 (63%), Gaps = 1/146 (0%)
Frame = +3
Query: 111 SAFGGLLR-RSTTYRTSVTCRLSTVALQQKFSTIKAAVKIYKSQALQNGVPQSHRYSTGV 287
+AF L R R ++ L + Q + T++ A+ + +Q +YS
Sbjct: 15 AAFAPLPRVRMLAVARPLSTALCSAGTQTRLGTLQPALVL--AQVPGRVTQLCRQYSD-- 70
Query: 288 QSKLSVQEIEERVLKVCKAYDKLSASQLTVDSHFMNDLGLDSLDHVEVIMAMEDEFGFEI 467
L+++ I++RVL V K YDK+ +L+V+SHFM DLGLDSLD VE+IMAMEDEFGFEI
Sbjct: 71 MPPLTLEGIQDRVLYVLKLYDKIDPEKLSVNSHFMKDLGLDSLDQVEIIMAMEDEFGFEI 130
Query: 468 PDGDAXRLVRPKDIVQYIADKEXIYE 545
PD DA +L+ P++IV YIADK+ +YE
Sbjct: 131 PDIDAEKLMCPQEIVDYIADKKDVYE 156
>AC002400-1|AAC05814.1| 161|Homo sapiens Acyl carrier protein,
Mitochondrial (ACP) (5'partial) protein.
Length = 161
Score = 116 bits (280), Expect = 6e-26
Identities = 65/146 (44%), Positives = 92/146 (63%), Gaps = 1/146 (0%)
Frame = +3
Query: 111 SAFGGLLR-RSTTYRTSVTCRLSTVALQQKFSTIKAAVKIYKSQALQNGVPQSHRYSTGV 287
+AF L R R ++ L + Q + T++ A+ + +Q +YS
Sbjct: 20 AAFAPLPRVRMLAVARPLSTALCSAGTQTRLGTLQPALVL--AQVPGRVTQLCRQYSD-- 75
Query: 288 QSKLSVQEIEERVLKVCKAYDKLSASQLTVDSHFMNDLGLDSLDHVEVIMAMEDEFGFEI 467
L+++ I++RVL V K YDK+ +L+V+SHFM DLGLDSLD VE+IMAMEDEFGFEI
Sbjct: 76 MPPLTLEGIQDRVLYVLKLYDKIDPEKLSVNSHFMKDLGLDSLDQVEIIMAMEDEFGFEI 135
Query: 468 PDGDAXRLVRPKDIVQYIADKEXIYE 545
PD DA +L+ P++IV YIADK+ +YE
Sbjct: 136 PDIDAEKLMCPQEIVDYIADKKDVYE 161
>BC058920-1|AAH58920.1| 156|Homo sapiens NADH dehydrogenase
(ubiquinone) 1, alpha/beta subcomplex, 1, 8kDa protein.
Length = 156
Score = 113 bits (271), Expect = 7e-25
Identities = 64/146 (43%), Positives = 91/146 (62%), Gaps = 1/146 (0%)
Frame = +3
Query: 111 SAFGGLLR-RSTTYRTSVTCRLSTVALQQKFSTIKAAVKIYKSQALQNGVPQSHRYSTGV 287
+AF L R R ++ L + Q + T++ A+ + +Q +YS
Sbjct: 15 AAFAPLPRVRMLAVARPLSTALCSAGTQTRLGTLQPALVL--AQVPGRVTQLCRQYSD-- 70
Query: 288 QSKLSVQEIEERVLKVCKAYDKLSASQLTVDSHFMNDLGLDSLDHVEVIMAMEDEFGFEI 467
L+++ I++RVL V K YDK+ +L+V+SHFM DLGLDSLD VE+IMAMEDEFGFEI
Sbjct: 71 MPPLTLEGIQDRVLYVLKLYDKIDPEKLSVNSHFMKDLGLDSLDQVEIIMAMEDEFGFEI 130
Query: 468 PDGDAXRLVRPKDIVQYIADKEXIYE 545
P DA +L+ P++IV YIADK+ +YE
Sbjct: 131 PYIDAEKLMCPQEIVDYIADKKDVYE 156
>EF036490-1|ABO65076.1| 124|Homo sapiens NADH:ubiquinone
oxidoreductase SDAP subunit protein.
Length = 124
Score = 78.2 bits (184), Expect = 2e-14
Identities = 47/117 (40%), Positives = 68/117 (58%), Gaps = 1/117 (0%)
Frame = +3
Query: 111 SAFGGLLR-RSTTYRTSVTCRLSTVALQQKFSTIKAAVKIYKSQALQNGVPQSHRYSTGV 287
+AF L R R ++ L + Q + T++ A+ + +Q +YS
Sbjct: 12 AAFAPLPRVRMLAVARPLSTALCSAGTQTRLGTLQPALVL--AQVPGRVTQLCRQYSD-- 67
Query: 288 QSKLSVQEIEERVLKVCKAYDKLSASQLTVDSHFMNDLGLDSLDHVEVIMAMEDEFG 458
L+++ I++RVL V K YDK+ +L+V+SHFM DLGLDSLD VE+IMAMEDEFG
Sbjct: 68 MPPLTLEGIQDRVLYVLKLYDKIDPEKLSVNSHFMKDLGLDSLDQVEIIMAMEDEFG 124
>M97806-1|AAB05630.2| 110|Homo sapiens immunoglobulin kappa light
chain variable region protein.
Length = 110
Score = 31.1 bits (67), Expect = 3.7
Identities = 24/78 (30%), Positives = 40/78 (51%), Gaps = 10/78 (12%)
Frame = +3
Query: 147 YRTSVTCRLST-----VALQQKFSTIKAAVKIYKSQALQNGVPQSHRYS---TGVQSKLS 302
YR ++TCR S +A Q+ I + IYK+ +LQ+GV S R+S +G L+
Sbjct: 17 YRVTITCRASQSISSWLAWYQQKPGIAPKLLIYKASSLQSGV--SSRFSGSGSGTDFTLT 74
Query: 303 VQEI--EERVLKVCKAYD 350
+ + ++ C+ YD
Sbjct: 75 ISSLQPDDFATSYCQQYD 92
>U51134-1|AAD05036.1| 148|Homo sapiens calcitonin gene-related
peptide receptor component protein protein.
Length = 148
Score = 30.7 bits (66), Expect = 4.9
Identities = 19/60 (31%), Positives = 33/60 (55%)
Frame = +3
Query: 147 YRTSVTCRLSTVALQQKFSTIKAAVKIYKSQALQNGVPQSHRYSTGVQSKLSVQEIEERV 326
Y + CR + + ++F T + K+ K++ LQ +HR T V+ +L V+E EER+
Sbjct: 52 YISKTPCRHQSPEIVREFLTALKSHKLTKAEKLQL---LNHRPVTAVEIQLMVEESEERL 108
>BC105808-1|AAI05809.1| 148|Homo sapiens calcitonin gene-related
peptide-receptor component protein protein.
Length = 148
Score = 30.7 bits (66), Expect = 4.9
Identities = 19/60 (31%), Positives = 33/60 (55%)
Frame = +3
Query: 147 YRTSVTCRLSTVALQQKFSTIKAAVKIYKSQALQNGVPQSHRYSTGVQSKLSVQEIEERV 326
Y + CR + + ++F T + K+ K++ LQ +HR T V+ +L V+E EER+
Sbjct: 52 YISKTPCRHQSPEIVREFLTALKSHKLTKAEKLQL---LNHRPVTAVEIQLMVEESEERL 108
>BC040107-1|AAH40107.1| 115|Homo sapiens calcitonin gene-related
peptide-receptor component protein protein.
Length = 115
Score = 30.7 bits (66), Expect = 4.9
Identities = 19/60 (31%), Positives = 33/60 (55%)
Frame = +3
Query: 147 YRTSVTCRLSTVALQQKFSTIKAAVKIYKSQALQNGVPQSHRYSTGVQSKLSVQEIEERV 326
Y + CR + + ++F T + K+ K++ LQ +HR T V+ +L V+E EER+
Sbjct: 19 YISKTPCRHQSPEIVREFLTALKSHKLTKAEKLQL---LNHRPVTAVEIQLMVEESEERL 75
>AF073792-1|AAC25992.1| 148|Homo sapiens CGRP-receptor component
protein protein.
Length = 148
Score = 30.7 bits (66), Expect = 4.9
Identities = 19/60 (31%), Positives = 33/60 (55%)
Frame = +3
Query: 147 YRTSVTCRLSTVALQQKFSTIKAAVKIYKSQALQNGVPQSHRYSTGVQSKLSVQEIEERV 326
Y + CR + + ++F T + K+ K++ LQ +HR T V+ +L V+E EER+
Sbjct: 52 YISKTPCRHQSPEIVREFLTALKSHKLTKAEKLQL---LNHRPVTAVEIQLMVEESEERL 108
>BC131735-1|AAI31736.1| 2371|Homo sapiens neuroblastoma-amplified
protein protein.
Length = 2371
Score = 30.3 bits (65), Expect = 6.5
Identities = 16/49 (32%), Positives = 24/49 (48%)
Frame = -3
Query: 190 CNATVERRHVTDVLYVVDLRNRPPKALRKIFAAAISSSSRNALFSFKQF 44
C +R H D++ VVD PKA+ K+ A +R A+ + K F
Sbjct: 1880 CMKYFDRLHPGDLITVVDAVTFSPKAVTKLSVEARKEMTRKAIKTVKHF 1928
>BC051792-1|AAH51792.2| 1418|Homo sapiens NAG protein protein.
Length = 1418
Score = 30.3 bits (65), Expect = 6.5
Identities = 16/49 (32%), Positives = 24/49 (48%)
Frame = -3
Query: 190 CNATVERRHVTDVLYVVDLRNRPPKALRKIFAAAISSSSRNALFSFKQF 44
C +R H D++ VVD PKA+ K+ A +R A+ + K F
Sbjct: 927 CMKYFDRLHPGDLITVVDAVTFSPKAVTKLSVEARKEMTRKAIKTVKHF 975
>AL050281-1|CAB43382.1| 1296|Homo sapiens hypothetical protein
protein.
Length = 1296
Score = 30.3 bits (65), Expect = 6.5
Identities = 16/49 (32%), Positives = 24/49 (48%)
Frame = -3
Query: 190 CNATVERRHVTDVLYVVDLRNRPPKALRKIFAAAISSSSRNALFSFKQF 44
C +R H D++ VVD PKA+ K+ A +R A+ + K F
Sbjct: 805 CMKYFDRLHPGDLITVVDAVTFSPKAVTKLSVEARKEMTRKAIKTVKHF 853
>AF388385-1|AAM93544.1| 2371|Homo sapiens neuroblastoma-amplified
protein protein.
Length = 2371
Score = 30.3 bits (65), Expect = 6.5
Identities = 16/49 (32%), Positives = 24/49 (48%)
Frame = -3
Query: 190 CNATVERRHVTDVLYVVDLRNRPPKALRKIFAAAISSSSRNALFSFKQF 44
C +R H D++ VVD PKA+ K+ A +R A+ + K F
Sbjct: 1880 CMKYFDRLHPGDLITVVDAVTFSPKAVTKLSVEARKEMTRKAIKTVKHF 1928
>AF056195-1|AAD18133.1| 1352|Homo sapiens neuroblastoma-amplified
protein protein.
Length = 1352
Score = 30.3 bits (65), Expect = 6.5
Identities = 16/49 (32%), Positives = 24/49 (48%)
Frame = -3
Query: 190 CNATVERRHVTDVLYVVDLRNRPPKALRKIFAAAISSSSRNALFSFKQF 44
C +R H D++ VVD PKA+ K+ A +R A+ + K F
Sbjct: 845 CMKYFDRLHPGDLITVVDAVTFSPKAVTKLSVEARKEMTRKAIKTVKHF 893
>AC008282-1|AAY24347.1| 1060|Homo sapiens unknown protein.
Length = 1060
Score = 30.3 bits (65), Expect = 6.5
Identities = 16/49 (32%), Positives = 24/49 (48%)
Frame = -3
Query: 190 CNATVERRHVTDVLYVVDLRNRPPKALRKIFAAAISSSSRNALFSFKQF 44
C +R H D++ VVD PKA+ K+ A +R A+ + K F
Sbjct: 569 CMKYFDRLHPGDLITVVDAVTFSPKAVTKLSVEARKEMTRKAIKTVKHF 617
>AY282406-1|AAP40330.1| 917|Homo sapiens M-phase phosphoprotein 1
protein.
Length = 917
Score = 29.9 bits (64), Expect = 8.6
Identities = 30/113 (26%), Positives = 48/113 (42%), Gaps = 4/113 (3%)
Frame = +3
Query: 9 FWQPRLADSMRENCLKENKAFRELEEMAAANIFRSAFGGLLRRSTTYR----TSVTCRLS 176
+W R AD +E L+E + E E A IF+ G R + T V +
Sbjct: 612 YWAQREAD-FKETLLQEREILEENAERRLA-IFKDLVGKCDTREEAAKDICATKVETEEA 669
Query: 177 TVALQQKFSTIKAAVKIYKSQALQNGVPQSHRYSTGVQSKLSVQEIEERVLKV 335
T L+ KF+ IKA + K + ++ R + +S +QE+E K+
Sbjct: 670 TACLELKFNQIKAELAKTKGELIKTKEELKKREN---ESDSLIQELETSNKKI 719
>AL157400-5|CAI16831.1| 1780|Homo sapiens M-phase phosphoprotein 1
protein.
Length = 1780
Score = 29.9 bits (64), Expect = 8.6
Identities = 30/113 (26%), Positives = 48/113 (42%), Gaps = 4/113 (3%)
Frame = +3
Query: 9 FWQPRLADSMRENCLKENKAFRELEEMAAANIFRSAFGGLLRRSTTYR----TSVTCRLS 176
+W R AD +E L+E + E E A IF+ G R + T V +
Sbjct: 612 YWAQREAD-FKETLLQEREILEENAERRLA-IFKDLVGKCDTREEAAKDICATKVETEEA 669
Query: 177 TVALQQKFSTIKAAVKIYKSQALQNGVPQSHRYSTGVQSKLSVQEIEERVLKV 335
T L+ KF+ IKA + K + ++ R + +S +QE+E K+
Sbjct: 670 TACLELKFNQIKAELAKTKGELIKTKEELKKREN---ESDSLIQELETSNKKI 719
>AL157389-2|CAI12887.1| 1780|Homo sapiens M-phase phosphoprotein 1
protein.
Length = 1780
Score = 29.9 bits (64), Expect = 8.6
Identities = 30/113 (26%), Positives = 48/113 (42%), Gaps = 4/113 (3%)
Frame = +3
Query: 9 FWQPRLADSMRENCLKENKAFRELEEMAAANIFRSAFGGLLRRSTTYR----TSVTCRLS 176
+W R AD +E L+E + E E A IF+ G R + T V +
Sbjct: 612 YWAQREAD-FKETLLQEREILEENAERRLA-IFKDLVGKCDTREEAAKDICATKVETEEA 669
Query: 177 TVALQQKFSTIKAAVKIYKSQALQNGVPQSHRYSTGVQSKLSVQEIEERVLKV 335
T L+ KF+ IKA + K + ++ R + +S +QE+E K+
Sbjct: 670 TACLELKFNQIKAELAKTKGELIKTKEELKKREN---ESDSLIQELETSNKKI 719
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 91,516,409
Number of Sequences: 237096
Number of extensions: 1745691
Number of successful extensions: 3738
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 3662
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3738
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7591280850
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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