Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP02_F_M09
         (669 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Y09068-1|CAA70289.1|  143|Drosophila melanogaster NADH-ubiquinon...   131   1e-30
AY089404-1|AAL90142.1|  143|Drosophila melanogaster AT22870p pro...   131   1e-30
AJ000879-2|CAA04368.1|  143|Drosophila melanogaster mtAcyl carri...   131   1e-30
AE014296-232|AAF47479.1|  143|Drosophila melanogaster CG9160-PB,...   131   1e-30
AE014296-233|AAF47480.1|  152|Drosophila melanogaster CG9160-PA,...   129   3e-30
Y09069-1|CAA70290.1|  152|Drosophila melanogaster acyl-carrier s...   128   5e-30
AJ000879-3|CAA04369.1|  152|Drosophila melanogaster mtAcyl carri...   128   5e-30
Y08160-1|CAA69352.1| 1745|Drosophila melanogaster dilute class u...    29   5.7  
AF003826-1|AAC99496.1| 1792|Drosophila melanogaster myosin V pro...    29   5.7  
AE013599-434|AAF59241.2| 1792|Drosophila melanogaster CG2146-PA,...    29   5.7  
AE013599-433|AAM68902.1| 1800|Drosophila melanogaster CG2146-PC,...    29   5.7  
L08811-1|AAA79329.2| 3503|Drosophila melanogaster adherin protein.     29   7.6  
BT025107-1|ABE73278.1|  501|Drosophila melanogaster IP10618p pro...    29   7.6  
BT021417-1|AAX33565.1|  420|Drosophila melanogaster LD04387p pro...    29   7.6  
AE014296-2922|AAF49330.1|  420|Drosophila melanogaster CG7564-PA...    29   7.6  
AE014134-1123|ABC65879.1|  398|Drosophila melanogaster CG34009-P...    29   7.6  
AE014134-139|AAF51468.3| 3556|Drosophila melanogaster CG17941-PA...    29   7.6  

>Y09068-1|CAA70289.1|  143|Drosophila melanogaster NADH-ubiquinone
           oxidoreductaseacyl-carrier subunit protein.
          Length = 143

 Score =  131 bits (316), Expect = 1e-30
 Identities = 57/85 (67%), Positives = 75/85 (88%)
 Frame = +3

Query: 291 SKLSVQEIEERVLKVCKAYDKLSASQLTVDSHFMNDLGLDSLDHVEVIMAMEDEFGFEIP 470
           +K ++++I+ RVLKV  AYDK++A +L V+SHF+NDLGLDSLDHVEVIMAMEDEFGFEIP
Sbjct: 59  AKSTIEDIKFRVLKVVSAYDKVTAEKLNVESHFINDLGLDSLDHVEVIMAMEDEFGFEIP 118

Query: 471 DGDAXRLVRPKDIVQYIADKEXIYE 545
           D DA +L++P DI++Y+ADKE +YE
Sbjct: 119 DSDAEKLLKPADIIKYVADKEDVYE 143


>AY089404-1|AAL90142.1|  143|Drosophila melanogaster AT22870p
           protein.
          Length = 143

 Score =  131 bits (316), Expect = 1e-30
 Identities = 57/85 (67%), Positives = 75/85 (88%)
 Frame = +3

Query: 291 SKLSVQEIEERVLKVCKAYDKLSASQLTVDSHFMNDLGLDSLDHVEVIMAMEDEFGFEIP 470
           +K ++++I+ RVLKV  AYDK++A +L V+SHF+NDLGLDSLDHVEVIMAMEDEFGFEIP
Sbjct: 59  AKSTIEDIKFRVLKVVSAYDKVTAEKLNVESHFINDLGLDSLDHVEVIMAMEDEFGFEIP 118

Query: 471 DGDAXRLVRPKDIVQYIADKEXIYE 545
           D DA +L++P DI++Y+ADKE +YE
Sbjct: 119 DSDAEKLLKPADIIKYVADKEDVYE 143


>AJ000879-2|CAA04368.1|  143|Drosophila melanogaster mtAcyl carrier
           subunit isoform 1 protein.
          Length = 143

 Score =  131 bits (316), Expect = 1e-30
 Identities = 57/85 (67%), Positives = 75/85 (88%)
 Frame = +3

Query: 291 SKLSVQEIEERVLKVCKAYDKLSASQLTVDSHFMNDLGLDSLDHVEVIMAMEDEFGFEIP 470
           +K ++++I+ RVLKV  AYDK++A +L V+SHF+NDLGLDSLDHVEVIMAMEDEFGFEIP
Sbjct: 59  AKSTIEDIKFRVLKVVSAYDKVTAEKLNVESHFINDLGLDSLDHVEVIMAMEDEFGFEIP 118

Query: 471 DGDAXRLVRPKDIVQYIADKEXIYE 545
           D DA +L++P DI++Y+ADKE +YE
Sbjct: 119 DSDAEKLLKPADIIKYVADKEDVYE 143


>AE014296-232|AAF47479.1|  143|Drosophila melanogaster CG9160-PB,
           isoform B protein.
          Length = 143

 Score =  131 bits (316), Expect = 1e-30
 Identities = 57/85 (67%), Positives = 75/85 (88%)
 Frame = +3

Query: 291 SKLSVQEIEERVLKVCKAYDKLSASQLTVDSHFMNDLGLDSLDHVEVIMAMEDEFGFEIP 470
           +K ++++I+ RVLKV  AYDK++A +L V+SHF+NDLGLDSLDHVEVIMAMEDEFGFEIP
Sbjct: 59  AKSTIEDIKFRVLKVVSAYDKVTAEKLNVESHFINDLGLDSLDHVEVIMAMEDEFGFEIP 118

Query: 471 DGDAXRLVRPKDIVQYIADKEXIYE 545
           D DA +L++P DI++Y+ADKE +YE
Sbjct: 119 DSDAEKLLKPADIIKYVADKEDVYE 143


>AE014296-233|AAF47480.1|  152|Drosophila melanogaster CG9160-PA,
           isoform A protein.
          Length = 152

 Score =  129 bits (312), Expect = 3e-30
 Identities = 61/92 (66%), Positives = 75/92 (81%)
 Frame = +3

Query: 270 RYSTGVQSKLSVQEIEERVLKVCKAYDKLSASQLTVDSHFMNDLGLDSLDHVEVIMAMED 449
           RYS   +  LS++ I ERVL V K YDK+  S+L V+SHF+NDLGLDSLDHVEVIMAMED
Sbjct: 63  RYSA--KPPLSLKLINERVLLVLKLYDKIDPSKLNVESHFINDLGLDSLDHVEVIMAMED 120

Query: 450 EFGFEIPDGDAXRLVRPKDIVQYIADKEXIYE 545
           EFGFEIPD DA +L++P DI++Y+ADKE +YE
Sbjct: 121 EFGFEIPDSDAEKLLKPADIIKYVADKEDVYE 152


>Y09069-1|CAA70290.1|  152|Drosophila melanogaster acyl-carrier
           subunit of NADH:ubiquinoneoxidoreductase protein.
          Length = 152

 Score =  128 bits (310), Expect = 5e-30
 Identities = 58/83 (69%), Positives = 71/83 (85%)
 Frame = +3

Query: 297 LSVQEIEERVLKVCKAYDKLSASQLTVDSHFMNDLGLDSLDHVEVIMAMEDEFGFEIPDG 476
           LS++ I ERVL V K YDK+  S+L V+SHF+NDLGLDSLDHVEVIMAMEDEFGFEIPD 
Sbjct: 70  LSLKLINERVLLVLKLYDKIDPSKLNVESHFINDLGLDSLDHVEVIMAMEDEFGFEIPDS 129

Query: 477 DAXRLVRPKDIVQYIADKEXIYE 545
           DA +L++P DI++Y+ADKE +YE
Sbjct: 130 DAEKLLKPADIIKYVADKEDVYE 152


>AJ000879-3|CAA04369.1|  152|Drosophila melanogaster mtAcyl carrier
           subunit isoform 2 protein.
          Length = 152

 Score =  128 bits (310), Expect = 5e-30
 Identities = 58/83 (69%), Positives = 71/83 (85%)
 Frame = +3

Query: 297 LSVQEIEERVLKVCKAYDKLSASQLTVDSHFMNDLGLDSLDHVEVIMAMEDEFGFEIPDG 476
           LS++ I ERVL V K YDK+  S+L V+SHF+NDLGLDSLDHVEVIMAMEDEFGFEIPD 
Sbjct: 70  LSLKLINERVLLVLKLYDKIDPSKLNVESHFINDLGLDSLDHVEVIMAMEDEFGFEIPDS 129

Query: 477 DAXRLVRPKDIVQYIADKEXIYE 545
           DA +L++P DI++Y+ADKE +YE
Sbjct: 130 DAEKLLKPADIIKYVADKEDVYE 152


>Y08160-1|CAA69352.1| 1745|Drosophila melanogaster dilute class
            unconventional myosin protein.
          Length = 1745

 Score = 29.1 bits (62), Expect = 5.7
 Identities = 11/35 (31%), Positives = 19/35 (54%)
 Frame = +1

Query: 442  WKMNLDLRYRMVMXRDWLDQKTLSNTLLTRXIFMN 546
            W+  + +RY +    DW+  K +SN +LT    +N
Sbjct: 1601 WETGMIIRYNIGCIEDWVRSKKMSNDVLTALAPLN 1635


>AF003826-1|AAC99496.1| 1792|Drosophila melanogaster myosin V protein.
          Length = 1792

 Score = 29.1 bits (62), Expect = 5.7
 Identities = 11/35 (31%), Positives = 19/35 (54%)
 Frame = +1

Query: 442  WKMNLDLRYRMVMXRDWLDQKTLSNTLLTRXIFMN 546
            W+  + +RY +    DW+  K +SN +LT    +N
Sbjct: 1648 WETGMIIRYNIGCIEDWVRSKKMSNDVLTALAPLN 1682


>AE013599-434|AAF59241.2| 1792|Drosophila melanogaster CG2146-PA,
            isoform A protein.
          Length = 1792

 Score = 29.1 bits (62), Expect = 5.7
 Identities = 11/35 (31%), Positives = 19/35 (54%)
 Frame = +1

Query: 442  WKMNLDLRYRMVMXRDWLDQKTLSNTLLTRXIFMN 546
            W+  + +RY +    DW+  K +SN +LT    +N
Sbjct: 1648 WETGMIIRYNIGCIEDWVRSKKMSNDVLTALAPLN 1682


>AE013599-433|AAM68902.1| 1800|Drosophila melanogaster CG2146-PC,
            isoform C protein.
          Length = 1800

 Score = 29.1 bits (62), Expect = 5.7
 Identities = 11/35 (31%), Positives = 19/35 (54%)
 Frame = +1

Query: 442  WKMNLDLRYRMVMXRDWLDQKTLSNTLLTRXIFMN 546
            W+  + +RY +    DW+  K +SN +LT    +N
Sbjct: 1656 WETGMIIRYNIGCIEDWVRSKKMSNDVLTALAPLN 1690


>L08811-1|AAA79329.2| 3503|Drosophila melanogaster adherin protein.
          Length = 3503

 Score = 28.7 bits (61), Expect = 7.6
 Identities = 15/36 (41%), Positives = 20/36 (55%)
 Frame = +3

Query: 399  LGLDSLDHVEVIMAMEDEFGFEIPDGDAXRLVRPKD 506
            LG D+LD    I+A  +E  FE+    A  LV+P D
Sbjct: 2617 LGQDALDQSLAIIAGNEESAFELLQSKAIVLVKPLD 2652


>BT025107-1|ABE73278.1|  501|Drosophila melanogaster IP10618p
           protein.
          Length = 501

 Score = 28.7 bits (61), Expect = 7.6
 Identities = 16/66 (24%), Positives = 31/66 (46%)
 Frame = +3

Query: 225 IYKSQALQNGVPQSHRYSTGVQSKLSVQEIEERVLKVCKAYDKLSASQLTVDSHFMNDLG 404
           + K++  +N V Q   YS  +++   ++EIE   ++    Y      ++     F+N L 
Sbjct: 18  VCKAKKAENDVVQEVIYSNSIRALSELREIENSYMEHLNNYVSFLQQKIKTLRIFINSLT 77

Query: 405 LDSLDH 422
            + LDH
Sbjct: 78  PNYLDH 83


>BT021417-1|AAX33565.1|  420|Drosophila melanogaster LD04387p
           protein.
          Length = 420

 Score = 28.7 bits (61), Expect = 7.6
 Identities = 17/64 (26%), Positives = 31/64 (48%)
 Frame = +3

Query: 255 VPQSHRYSTGVQSKLSVQEIEERVLKVCKAYDKLSASQLTVDSHFMNDLGLDSLDHVEVI 434
           +   H Y T + +  + Q+ + RV +VC AY  +  + + +  HF   L L  L   E +
Sbjct: 172 IKAEHEYRTSMPAS-TYQQQKLRVCEVCSAYLGIHDNDIRLADHFGGKLHLGFLTIREKL 230

Query: 435 MAME 446
           + +E
Sbjct: 231 IELE 234


>AE014296-2922|AAF49330.1|  420|Drosophila melanogaster CG7564-PA
           protein.
          Length = 420

 Score = 28.7 bits (61), Expect = 7.6
 Identities = 17/64 (26%), Positives = 31/64 (48%)
 Frame = +3

Query: 255 VPQSHRYSTGVQSKLSVQEIEERVLKVCKAYDKLSASQLTVDSHFMNDLGLDSLDHVEVI 434
           +   H Y T + +  + Q+ + RV +VC AY  +  + + +  HF   L L  L   E +
Sbjct: 172 IKAEHEYRTSMPAS-TYQQQKLRVCEVCSAYLGIHDNDIRLADHFGGKLHLGFLTIREKL 230

Query: 435 MAME 446
           + +E
Sbjct: 231 IELE 234


>AE014134-1123|ABC65879.1|  398|Drosophila melanogaster CG34009-PA
           protein.
          Length = 398

 Score = 28.7 bits (61), Expect = 7.6
 Identities = 16/66 (24%), Positives = 31/66 (46%)
 Frame = +3

Query: 225 IYKSQALQNGVPQSHRYSTGVQSKLSVQEIEERVLKVCKAYDKLSASQLTVDSHFMNDLG 404
           + K++  +N V Q   YS  +++   ++EIE   ++    Y      ++     F+N L 
Sbjct: 243 VCKAKKAENDVVQEVIYSNSIRALSELREIENSYMEHLNNYVSFLQQKIKTLRIFINSLT 302

Query: 405 LDSLDH 422
            + LDH
Sbjct: 303 PNYLDH 308


>AE014134-139|AAF51468.3| 3556|Drosophila melanogaster CG17941-PA
            protein.
          Length = 3556

 Score = 28.7 bits (61), Expect = 7.6
 Identities = 15/36 (41%), Positives = 20/36 (55%)
 Frame = +3

Query: 399  LGLDSLDHVEVIMAMEDEFGFEIPDGDAXRLVRPKD 506
            LG D+LD    I+A  +E  FE+    A  LV+P D
Sbjct: 2670 LGQDALDQSLAIIAGNEESAFELLQSKAIVLVKPLD 2705


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 28,189,254
Number of Sequences: 53049
Number of extensions: 545750
Number of successful extensions: 1359
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 1315
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1359
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2889369000
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)