Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP02_F_M06
         (339 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    24   0.37 
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    24   0.37 
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    24   0.37 
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    24   0.37 
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    22   2.0  
DQ493452-1|ABF48588.1|  305|Tribolium castaneum hedgehog protein.      22   2.0  
DQ659253-1|ABG47451.1|  439|Tribolium castaneum imaginal disc gr...    20   6.0  
AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory recept...    20   8.0  
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    20   8.0  

>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
            variant 2 protein.
          Length = 1558

 Score = 24.2 bits (50), Expect = 0.37
 Identities = 9/22 (40%), Positives = 13/22 (59%)
 Frame = +2

Query: 56   HQLKVGDQLPAADLFEDSPANK 121
            H+  V   +PA D+FE+   NK
Sbjct: 1506 HRNSVASSIPAKDVFENGHVNK 1527


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
            variant 1 protein.
          Length = 1558

 Score = 24.2 bits (50), Expect = 0.37
 Identities = 9/22 (40%), Positives = 13/22 (59%)
 Frame = +2

Query: 56   HQLKVGDQLPAADLFEDSPANK 121
            H+  V   +PA D+FE+   NK
Sbjct: 1506 HRNSVASSIPAKDVFENGHVNK 1527


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase CHS1B
            protein.
          Length = 1558

 Score = 24.2 bits (50), Expect = 0.37
 Identities = 9/22 (40%), Positives = 13/22 (59%)
 Frame = +2

Query: 56   HQLKVGDQLPAADLFEDSPANK 121
            H+  V   +PA D+FE+   NK
Sbjct: 1506 HRNSVASSIPAKDVFENGHVNK 1527


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase CHS1A
            protein.
          Length = 1558

 Score = 24.2 bits (50), Expect = 0.37
 Identities = 9/22 (40%), Positives = 13/22 (59%)
 Frame = +2

Query: 56   HQLKVGDQLPAADLFEDSPANK 121
            H+  V   +PA D+FE+   NK
Sbjct: 1506 HRNSVASSIPAKDVFENGHVNK 1527


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 21.8 bits (44), Expect = 2.0
 Identities = 8/13 (61%), Positives = 10/13 (76%)
 Frame = -2

Query: 305  KPPSHTGH*QTRT 267
            +PPS T H QT+T
Sbjct: 1175 RPPSTTNHWQTKT 1187



 Score = 21.4 bits (43), Expect = 2.6
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = +2

Query: 35   HFTT*AWHQLKVGDQLPA 88
            +FT  AW++  VG  LP+
Sbjct: 1828 YFTNWAWYRQGVGKYLPS 1845



 Score = 20.6 bits (41), Expect = 4.6
 Identities = 9/26 (34%), Positives = 13/26 (50%)
 Frame = +2

Query: 8    QSSVSASTSHFTT*AWHQLKVGDQLP 85
            QS       +FT  AW++  +G  LP
Sbjct: 1394 QSGYFKIVCYFTNWAWYRKGLGKYLP 1419


>DQ493452-1|ABF48588.1|  305|Tribolium castaneum hedgehog protein.
          Length = 305

 Score = 21.8 bits (44), Expect = 2.0
 Identities = 12/31 (38%), Positives = 15/31 (48%)
 Frame = -3

Query: 160 YNLLSRRQLTNIHLISGRIFE*ISSRQLIPD 68
           YN   +RQ  +I L SGR      S  L+ D
Sbjct: 157 YNPSQKRQFLHITLASGRTLTVTPSHLLVLD 187


>DQ659253-1|ABG47451.1|  439|Tribolium castaneum imaginal disc
           growth factor 2 protein.
          Length = 439

 Score = 20.2 bits (40), Expect = 6.0
 Identities = 12/37 (32%), Positives = 16/37 (43%)
 Frame = +2

Query: 176 GAFTPGCSKTHLPGYVQNAXKLKSDGVAEIXCVSVND 286
           G F  G   T   GY  +  K K  G   I  +S++D
Sbjct: 383 GGFWVGYEDTDTAGYKASYVKAKGLGGIAIVDLSLDD 419


>AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory receptor
           candidate 43 protein.
          Length = 353

 Score = 19.8 bits (39), Expect = 8.0
 Identities = 9/21 (42%), Positives = 12/21 (57%), Gaps = 1/21 (4%)
 Frame = -3

Query: 277 RHAX-YFSNSIRFQFXCVLYV 218
           RH   YF N I F +  +LY+
Sbjct: 149 RHTVEYFQNYIHFFYQLLLYL 169


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 19.8 bits (39), Expect = 8.0
 Identities = 11/34 (32%), Positives = 12/34 (35%)
 Frame = +2

Query: 50  AWHQLKVGDQLPAADLFEDSPANKVNICELTAGK 151
           A H+ K GD     D   DS       CE    K
Sbjct: 610 AQHEFKNGDSSSLLDKMRDSSGAGRITCEKCGNK 643


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 77,567
Number of Sequences: 336
Number of extensions: 1595
Number of successful extensions: 13
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 50
effective length of database: 105,785
effective search space used:  6558670
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)