Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP02_F_M06
(339 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr... 21 4.1
DQ435332-1|ABD92647.1| 135|Apis mellifera OBP15 protein. 21 5.4
AY268030-1|AAP23055.1| 602|Apis mellifera dorsal protein protein. 21 5.4
EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholi... 20 7.1
AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic ac... 20 7.1
EF540769-1|ABQ14707.1| 620|Apis mellifera adenosine deaminase p... 20 9.4
EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholi... 20 9.4
DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride... 20 9.4
DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride... 20 9.4
DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride... 20 9.4
DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride... 20 9.4
DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 20 9.4
DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 20 9.4
AY273778-1|AAP33487.1| 427|Apis mellifera ultraspiracle protein... 20 9.4
AJ547798-1|CAD67999.1| 587|Apis mellifera octopamine receptor p... 20 9.4
AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic ac... 20 9.4
AF263459-1|AAF73057.1| 427|Apis mellifera ultraspiracle protein... 20 9.4
>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
protein.
Length = 1370
Score = 21.0 bits (42), Expect = 4.1
Identities = 13/32 (40%), Positives = 16/32 (50%)
Frame = -3
Query: 193 SRGEGARHRK*YNLLSRRQLTNIHLISGRIFE 98
SR E R ++ LL RQL +HL I E
Sbjct: 220 SRNEITRLQENSPLLDLRQLQELHLQRNAIVE 251
>DQ435332-1|ABD92647.1| 135|Apis mellifera OBP15 protein.
Length = 135
Score = 20.6 bits (41), Expect = 5.4
Identities = 9/23 (39%), Positives = 15/23 (65%)
Frame = -3
Query: 133 TNIHLISGRIFE*ISSRQLIPDL 65
TN+HL +IF+ I+ + I D+
Sbjct: 110 TNVHLKITKIFQCITKFKTINDI 132
>AY268030-1|AAP23055.1| 602|Apis mellifera dorsal protein protein.
Length = 602
Score = 20.6 bits (41), Expect = 5.4
Identities = 9/25 (36%), Positives = 13/25 (52%)
Frame = -2
Query: 158 QPSFPPSTHKYSPY*RENLRINQQQ 84
QPS T + PY + L+I Q+
Sbjct: 452 QPSIRTYTQQQFPYVHDTLQIQPQE 476
>EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 4 protein.
Length = 461
Score = 20.2 bits (40), Expect = 7.1
Identities = 8/26 (30%), Positives = 13/26 (50%)
Frame = -1
Query: 222 TYPGKCVLEHPGVKAPGTANNTTFFP 145
T+ G C+ PG+ + T+FP
Sbjct: 94 THDGSCLYVPPGIFKSTCKIDITWFP 119
>AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic
acetylcholine receptorApisa2 subunit protein.
Length = 541
Score = 20.2 bits (40), Expect = 7.1
Identities = 7/12 (58%), Positives = 10/12 (83%)
Frame = -2
Query: 143 PSTHKYSPY*RE 108
PSTHK +P+ R+
Sbjct: 327 PSTHKMAPWVRK 338
>EF540769-1|ABQ14707.1| 620|Apis mellifera adenosine deaminase
protein.
Length = 620
Score = 19.8 bits (39), Expect = 9.4
Identities = 7/15 (46%), Positives = 9/15 (60%)
Frame = -2
Query: 176 PAPQIIQPSFPPSTH 132
P P + P+FP S H
Sbjct: 226 PLPVRVLPNFPSSGH 240
>EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 1 protein.
Length = 461
Score = 19.8 bits (39), Expect = 9.4
Identities = 8/26 (30%), Positives = 13/26 (50%)
Frame = -1
Query: 222 TYPGKCVLEHPGVKAPGTANNTTFFP 145
T+ G C+ PG+ + T+FP
Sbjct: 94 THNGSCLYVPPGIFKSTCKIDITWFP 119
>DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride
channel variant 4 protein.
Length = 489
Score = 19.8 bits (39), Expect = 9.4
Identities = 11/27 (40%), Positives = 14/27 (51%)
Frame = -1
Query: 306 QAAITYGSLTDTHXISATPSDFSLXAF 226
Q AITY D + +PS SL A+
Sbjct: 211 QTAITYVWKNDEGTLRKSPSLTSLNAY 237
>DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride
channel variant 3 protein.
Length = 475
Score = 19.8 bits (39), Expect = 9.4
Identities = 11/27 (40%), Positives = 14/27 (51%)
Frame = -1
Query: 306 QAAITYGSLTDTHXISATPSDFSLXAF 226
Q AITY D + +PS SL A+
Sbjct: 211 QTAITYVWKNDEGTLRKSPSLTSLNAY 237
Score = 19.8 bits (39), Expect = 9.4
Identities = 14/36 (38%), Positives = 17/36 (47%)
Frame = -1
Query: 219 YPGKCVLEHPGVKAPGTANNTTFFPAVNSQIFTLLA 112
Y G+ H V PG T PAV S+I +LA
Sbjct: 355 YVGRKRPMHNVVYRPGENPVTQRLPAVLSRIGIILA 390
>DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride
channel variant 1 protein.
Length = 509
Score = 19.8 bits (39), Expect = 9.4
Identities = 11/27 (40%), Positives = 14/27 (51%)
Frame = -1
Query: 306 QAAITYGSLTDTHXISATPSDFSLXAF 226
Q AITY D + +PS SL A+
Sbjct: 262 QTAITYVWKNDEGTLRKSPSLTSLNAY 288
>DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride
channel protein.
Length = 458
Score = 19.8 bits (39), Expect = 9.4
Identities = 11/27 (40%), Positives = 14/27 (51%)
Frame = -1
Query: 306 QAAITYGSLTDTHXISATPSDFSLXAF 226
Q AITY D + +PS SL A+
Sbjct: 211 QTAITYVWKNDEGTLRKSPSLTSLNAY 237
>DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 19.8 bits (39), Expect = 9.4
Identities = 8/26 (30%), Positives = 13/26 (50%)
Frame = -1
Query: 222 TYPGKCVLEHPGVKAPGTANNTTFFP 145
T+ G C+ PG+ + T+FP
Sbjct: 162 THNGSCLYVPPGIFKSTCKIDITWFP 187
>DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 19.8 bits (39), Expect = 9.4
Identities = 8/26 (30%), Positives = 13/26 (50%)
Frame = -1
Query: 222 TYPGKCVLEHPGVKAPGTANNTTFFP 145
T+ G C+ PG+ + T+FP
Sbjct: 162 THNGSCLYVPPGIFKSTCKIDITWFP 187
>AY273778-1|AAP33487.1| 427|Apis mellifera ultraspiracle protein
protein.
Length = 427
Score = 19.8 bits (39), Expect = 9.4
Identities = 6/8 (75%), Positives = 7/8 (87%)
Frame = +2
Query: 173 PGAFTPGC 196
PG+FT GC
Sbjct: 71 PGSFTAGC 78
>AJ547798-1|CAD67999.1| 587|Apis mellifera octopamine receptor
protein.
Length = 587
Score = 19.8 bits (39), Expect = 9.4
Identities = 8/19 (42%), Positives = 12/19 (63%)
Frame = +2
Query: 128 ICELTAGKKVVLFAVPGAF 184
ICELT V+++ G+F
Sbjct: 238 ICELTNDAGYVVYSALGSF 256
>AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha-3 protein.
Length = 537
Score = 19.8 bits (39), Expect = 9.4
Identities = 7/12 (58%), Positives = 9/12 (75%)
Frame = -2
Query: 143 PSTHKYSPY*RE 108
PSTH SP+ R+
Sbjct: 341 PSTHNMSPWVRQ 352
>AF263459-1|AAF73057.1| 427|Apis mellifera ultraspiracle protein
protein.
Length = 427
Score = 19.8 bits (39), Expect = 9.4
Identities = 6/8 (75%), Positives = 7/8 (87%)
Frame = +2
Query: 173 PGAFTPGC 196
PG+FT GC
Sbjct: 71 PGSFTAGC 78
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 91,677
Number of Sequences: 438
Number of extensions: 1609
Number of successful extensions: 18
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 146,343
effective HSP length: 50
effective length of database: 124,443
effective search space used: 7715466
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)
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