Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP02_F_M05
(668 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC3C7.11c |cnx1|cal1, cal1|calnexin |Schizosaccharomyces pombe... 97 3e-21
SPBP4H10.19c |||calreticulin/calnexin homolog|Schizosaccharomyce... 43 5e-05
SPAP11E10.02c |mam3|SPAPB1A10.01c|cell agglutination protein Mam... 36 0.004
SPBC30B4.01c |wsc1|SPBC3D6.14c|transmembrane receptor Wsc1 |Schi... 31 0.15
SPCC4G3.12c |||ubiquitin-protein ligase E3 |Schizosaccharomyces ... 28 1.1
SPBC1E8.05 |||conserved fungal protein|Schizosaccharomyces pombe... 28 1.4
SPBC215.13 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 27 2.4
SPCC1259.14c |meu27||S. pombe specific UPF0300 family protein 5|... 26 4.3
SPAC1486.10 |thi1|ntf1, SPAC6G10.01|transcription factor Thi1|Sc... 26 4.3
SPAC31G5.19 |||ATPase with bromodomain protein|Schizosaccharomyc... 26 4.3
SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual 26 4.3
SPCC11E10.08 |rik1||silencing protein Rik1|Schizosaccharomyces p... 26 5.6
SPAC11G7.01 |||sequence orphan|Schizosaccharomyces pombe|chr 1||... 26 5.6
SPBC215.15 |sec13||COPII-coated vesicle component Sec13|Schizosa... 26 5.6
SPBC1A4.04 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 26 5.6
SPCC1672.11c |||P-type ATPase |Schizosaccharomyces pombe|chr 3||... 25 7.5
SPBC9B6.10 |cdc37||Hsp90 co-chaperone Cdc37|Schizosaccharomyces ... 25 7.5
SPCC1020.02 |spc7||kinetochore protein Spc7|Schizosaccharomyces ... 25 7.5
SPAC20G8.02 |||phospholipase|Schizosaccharomyces pombe|chr 1|||M... 25 9.9
SPAC23G3.05c |||regulator of G-protein signaling |Schizosaccharo... 25 9.9
SPAC11E3.01c |swr1|SPAC2H10.03c|SNF2 family helicase Swr1|Schizo... 25 9.9
>SPAC3C7.11c |cnx1|cal1, cal1|calnexin |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 560
Score = 96.7 bits (230), Expect = 3e-21
Identities = 58/151 (38%), Positives = 82/151 (54%), Gaps = 8/151 (5%)
Frame = +1
Query: 238 DKGLKTSEDARFYALSRKF-KPFSNEGKPLVVQFTVKHEQDIDCGGGYLKVFDCKLEXKD 414
+ GL ++A +A+S +F +P + K LVVQ+ V E+ ++CGG YLK+ + +
Sbjct: 89 EAGLVMKDEAAHHAISYEFDEPINEPEKDLVVQYEVNPEEGLNCGGAYLKLL-AEPTHGE 147
Query: 415 MHGETPYEIMFGPDICGPGTKKVHVIFSYKG-------KNHLIKKDIRCKDDVYTHLYTL 573
M Y IMFGPD CG + VH IF +K + HL + T+LYTL
Sbjct: 148 MSNSIDYRIMFGPDKCGVNDR-VHFIFKHKNPLTGEYSEKHLDSRPASLLKPGITNLYTL 206
Query: 574 IVKPDNTYEVLIDNXKVESGDLXADWDFLPP 666
IVKPD T+EV I+ V G L +DF+PP
Sbjct: 207 IVKPDQTFEVRINGDVVRQGSLF--YDFIPP 235
>SPBP4H10.19c |||calreticulin/calnexin homolog|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 381
Score = 42.7 bits (96), Expect = 5e-05
Identities = 50/190 (26%), Positives = 80/190 (42%), Gaps = 8/190 (4%)
Frame = +1
Query: 118 FEEKFPDD---SWESNWVYSEHPGKEFGKFKLTAGKFFSDPEDDKGLKTSEDARFYAL-S 285
F E+F + +W S W K+ G + L S D+ GL T + + + L S
Sbjct: 33 FSEQFTSEDITTWRSRW--RAPVNKDLGVWDLVEAPG-SHLRDEYGLITLKSNKPHILIS 89
Query: 286 RKFKPFSNEGK--PLVVQFTVKHEQDIDCGGGYLKVFDCKLEXKDMHGETPYEIMFGPDI 459
P + + P+V+ F VK + CG Y+ + + K++ E P I FG
Sbjct: 90 NLENPTTRQSSSVPIVLSFQVKPTKPWTCGHAYVSLVH-QSNPKNVSKEPPSVIRFGVKK 148
Query: 460 CGPGTKKVHVIFSYKGK--NHLIKKDIRCKDDVYTHLYTLIVKPDNTYEVLIDNXKVESG 633
CG I SY GK HL + T +YTL+++ + T + D V +G
Sbjct: 149 CGMFDYISLSIISYDGKVSCHLYDAPPSGLVEGRTSMYTLLLQ-NTTVVIRRDQSVVYTG 207
Query: 634 DLXADWDFLP 663
D+ ++ P
Sbjct: 208 DVGTNFFHSP 217
>SPAP11E10.02c |mam3|SPAPB1A10.01c|cell agglutination protein
Mam3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1082
Score = 36.3 bits (80), Expect = 0.004
Identities = 28/80 (35%), Positives = 42/80 (52%), Gaps = 1/80 (1%)
Frame = -1
Query: 272 NLASSEVFKPLSSSGSLKNFPAVNLNFPNSFPGCSLYTQLLSHE-SSGNFSSKNTSQFIE 96
N SSE F S+S SL P VN + S + ++ L S + S+ NF+S ++S +
Sbjct: 475 NYTSSEAF---STSSSLVVIPPVNSSLVTSSTSFTKFSSLSSSQLSTENFTSASSSLSLT 531
Query: 95 DNASKLTTTSTTAFIFDSQV 36
+ S L+T STT +S V
Sbjct: 532 NAKSSLSTPSTTIPTSNSSV 551
>SPBC30B4.01c |wsc1|SPBC3D6.14c|transmembrane receptor Wsc1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 374
Score = 31.1 bits (67), Expect = 0.15
Identities = 34/146 (23%), Positives = 66/146 (45%)
Frame = -1
Query: 458 MSGPNIISYGVSPCMSXCSSLQSKTLRYPPPQSMSCSCLTVNWTTKGLPSLLNGLNLRER 279
++G ++ VS S S+ S + P S + + + ++ S + +
Sbjct: 117 LTGNGVLQTTVSSS-SVSSTTSSSSSSSPSSSSTTTTTSPSSSSSSSSSSSSSSSSSSSS 175
Query: 278 A*NLASSEVFKPLSSSGSLKNFPAVNLNFPNSFPGCSLYTQLLSHESSGNFSSKNTSQFI 99
+ + +SS SSS S + + + + +S P S + S SS + SS ++S+
Sbjct: 176 SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSVPITSSTSSSHSSSSSSSSSSSSSSR-P 234
Query: 98 EDNASKLTTTSTTAFIFDSQVPPSSN 21
++S +TT S++ FI V PSS+
Sbjct: 235 SSSSSFITTMSSSTFISTVTVTPSSS 260
>SPCC4G3.12c |||ubiquitin-protein ligase E3 |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 821
Score = 28.3 bits (60), Expect = 1.1
Identities = 15/44 (34%), Positives = 19/44 (43%)
Frame = -1
Query: 203 NLNFPNSFPGCSLYTQLLSHESSGNFSSKNTSQFIEDNASKLTT 72
N N F + + S +SGNFS T Q DN S +T
Sbjct: 575 NSNSQRPFSTVPSESNVFSRNASGNFSMSQTHQPTTDNTSSFST 618
>SPBC1E8.05 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 317
Score = 27.9 bits (59), Expect = 1.4
Identities = 25/113 (22%), Positives = 53/113 (46%)
Frame = -1
Query: 356 SCSCLTVNWTTKGLPSLLNGLNLRERA*NLASSEVFKPLSSSGSLKNFPAVNLNFPNSFP 177
+CS T++ ++ ++ ++ +S + SSS + P+ + + +S P
Sbjct: 110 ACSTCTISTSSLSYSGTISSTSIAPSMIGTRTSSSYFITSSSST----PSSSSSSSSSSP 165
Query: 176 GCSLYTQLLSHESSGNFSSKNTSQFIEDNASKLTTTSTTAFIFDSQVPPSSNK 18
S S +SS + SS + S ++SK +++S+++ S PSS+K
Sbjct: 166 SSSSSKSSSSSKSSSSSSSSSKSSSSSSSSSKSSSSSSSS--SKSSASPSSSK 216
>SPBC215.13 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 534
Score = 27.1 bits (57), Expect = 2.4
Identities = 33/137 (24%), Positives = 59/137 (43%)
Frame = -1
Query: 464 PQMSGPNIISYGVSPCMSXCSSLQSKTLRYPPPQSMSCSCLTVNWTTKGLPSLLNGLNLR 285
P S I S SP S SS S + S S + + + T+ + + + R
Sbjct: 336 PTSSSSTISSSSSSPSSSSFSSTTSSS---KSSSSFSSTVSSSSSTSSSTLTSSSSSSSR 392
Query: 284 ERA*NLASSEVFKPLSSSGSLKNFPAVNLNFPNSFPGCSLYTQLLSHESSGNFSSKNTSQ 105
+ + SS + SSS S + V+ F ++ S ++ SH SS + SS ++
Sbjct: 393 PASSSSHSSSLSSHKSSSSSKSSSAPVSSAFYHN----STSSRSSSHSSSHSLSSLSSKP 448
Query: 104 FIEDNASKLTTTSTTAF 54
+ ++S L T+S+ +
Sbjct: 449 ILTASSSSLLTSSSHTY 465
>SPCC1259.14c |meu27||S. pombe specific UPF0300 family protein
5|Schizosaccharomyces pombe|chr 3|||Manual
Length = 736
Score = 26.2 bits (55), Expect = 4.3
Identities = 18/71 (25%), Positives = 32/71 (45%), Gaps = 6/71 (8%)
Frame = +1
Query: 367 GGGYLKVFDCKLEXKDMHGETPYEIMFGPDICGPGTK----KVHVIFSYKGKNHLIKKDI 534
G +LKV + E M ETP +I++ + G+ +H K + KK++
Sbjct: 614 GKKFLKVDEATREDMLMSAETPDDILWITTLISTGSSMSHFPLHAYLEAKERQEFTKKNL 673
Query: 535 R--CKDDVYTH 561
CK+D + +
Sbjct: 674 LLFCKEDEFLY 684
>SPAC1486.10 |thi1|ntf1, SPAC6G10.01|transcription factor
Thi1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 775
Score = 26.2 bits (55), Expect = 4.3
Identities = 10/32 (31%), Positives = 18/32 (56%)
Frame = -1
Query: 272 NLASSEVFKPLSSSGSLKNFPAVNLNFPNSFP 177
N +E F+P + SL N P +N ++ ++ P
Sbjct: 685 NSTPNEAFQPFDQTSSLYNVPGLNKSYVSNQP 716
>SPAC31G5.19 |||ATPase with bromodomain protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1190
Score = 26.2 bits (55), Expect = 4.3
Identities = 12/48 (25%), Positives = 24/48 (50%)
Frame = +1
Query: 124 EKFPDDSWESNWVYSEHPGKEFGKFKLTAGKFFSDPEDDKGLKTSEDA 267
+ F +D + +W EH K ++ + + FS+ DD+ + SE +
Sbjct: 49 QAFQEDEGDEDWEEEEHKPKAKRRYNTRSNESFSE-GDDEPFEVSESS 95
>SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual
Length = 1236
Score = 26.2 bits (55), Expect = 4.3
Identities = 31/152 (20%), Positives = 61/152 (40%), Gaps = 1/152 (0%)
Frame = -1
Query: 473 VPGPQMSGPNIISYGVSPCMSXCSSLQSKTLRYPPPQSMSCSCLTVNWTTKGLPSLLNGL 294
+P S P+ S SP S SS S S S + ++ ++ +PS + +
Sbjct: 518 IPSTSSSTPSS-SIISSPMTSVLSSSSSIPTSSSSDFSSSITTISSGISSSSIPSTFSSV 576
Query: 293 NLRERA*NLASSEVFKPLSSSGSLKNFPAVNLNFPNSF-PGCSLYTQLLSHESSGNFSSK 117
+ + + S +SSS + F + + + P+S S + +LS + S
Sbjct: 577 SSILSSSTSSPSSTSLSISSSSTSSTFSSASTSSPSSISSSISSSSTILSSPTPSTSSLM 636
Query: 116 NTSQFIEDNASKLTTTSTTAFIFDSQVPPSSN 21
+S I +S + ++S + S + S+
Sbjct: 637 ISSSSIISGSSSILSSSISTIPISSSLSTYSS 668
>SPCC11E10.08 |rik1||silencing protein Rik1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1040
Score = 25.8 bits (54), Expect = 5.6
Identities = 18/58 (31%), Positives = 31/58 (53%), Gaps = 4/58 (6%)
Frame = -1
Query: 296 LNLRERA*NLASSEV----FKPLSSSGSLKNFPAVNLNFPNSFPGCSLYTQLLSHESS 135
++LR RA L+ E+ + LS+ LK +++ FP SFP +Y + ++SS
Sbjct: 121 VDLRMRAIFLSIDEISMICIRILSAEERLKTGRSIDSGFPFSFPVHLIYDMCILNDSS 178
>SPAC11G7.01 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 536
Score = 25.8 bits (54), Expect = 5.6
Identities = 27/123 (21%), Positives = 53/123 (43%), Gaps = 2/123 (1%)
Frame = -1
Query: 404 SSLQSKTLRYPPPQSMSCSCLTVNWTTKGLPSLLNGLNLRERA*NLASSEVFKPLSSSG- 228
+SL S P S S + T ++ +PS + + A ++SS PLSSS
Sbjct: 12 TSLSSSASSSIPASSSSAAASTSLSSSSVIPSSSSSMLSSSSATAISSSSSSSPLSSSSF 71
Query: 227 -SLKNFPAVNLNFPNSFPGCSLYTQLLSHESSGNFSSKNTSQFIEDNASKLTTTSTTAFI 51
S + + +S S + L+ SS +S +++ ++S ++S+++ +
Sbjct: 72 TSPASSSFITSLVSSSSQQSSSSSASLTSSSSATLTSSSSASPTSSSSSHALSSSSSSLV 131
Query: 50 FDS 42
S
Sbjct: 132 ASS 134
>SPBC215.15 |sec13||COPII-coated vesicle component
Sec13|Schizosaccharomyces pombe|chr 2|||Manual
Length = 297
Score = 25.8 bits (54), Expect = 5.6
Identities = 9/16 (56%), Positives = 11/16 (68%)
Frame = +1
Query: 121 EEKFPDDSWESNWVYS 168
EEKFPD +W +W S
Sbjct: 251 EEKFPDIAWRVSWSLS 266
>SPBC1A4.04 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 249
Score = 25.8 bits (54), Expect = 5.6
Identities = 24/87 (27%), Positives = 41/87 (47%)
Frame = -1
Query: 272 NLASSEVFKPLSSSGSLKNFPAVNLNFPNSFPGCSLYTQLLSHESSGNFSSKNTSQFIED 93
N ASS V + S + NF F N P SL Q L+ S+ S ++T ++
Sbjct: 106 NFASSSVTSAPTQSSHISNFTNSQKYFANDLPN-SLTDQPLAQPSA---SQRST--WLPC 159
Query: 92 NASKLTTTSTTAFIFDSQVPPSSNKRQ 12
+A+ T++ ++ FDS + + K +
Sbjct: 160 SAAVSTSSPSSDPFFDSYLEQAFEKAE 186
>SPCC1672.11c |||P-type ATPase |Schizosaccharomyces pombe|chr
3|||Manual
Length = 1315
Score = 25.4 bits (53), Expect = 7.5
Identities = 12/31 (38%), Positives = 14/31 (45%)
Frame = -2
Query: 166 CTPNCFPTNHQETSPQRIHHNLSKIMPAS*Q 74
C P FP N+QE H+ I AS Q
Sbjct: 791 CKPESFPANYQEVLDYYTHNGFRVIACASKQ 821
>SPBC9B6.10 |cdc37||Hsp90 co-chaperone Cdc37|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 466
Score = 25.4 bits (53), Expect = 7.5
Identities = 16/63 (25%), Positives = 34/63 (53%)
Frame = +1
Query: 223 SDPEDDKGLKTSEDARFYALSRKFKPFSNEGKPLVVQFTVKHEQDIDCGGGYLKVFDCKL 402
++ ED++GL SED + +A + F +S+ + L + +++ + L+ F+ +L
Sbjct: 236 NESEDEEGLSLSEDGKKFA-NIDFGDYSSSEEFLKEHLNILADEE-ESDAILLEAFNAEL 293
Query: 403 EXK 411
E K
Sbjct: 294 EGK 296
>SPCC1020.02 |spc7||kinetochore protein Spc7|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1364
Score = 25.4 bits (53), Expect = 7.5
Identities = 14/35 (40%), Positives = 17/35 (48%)
Frame = +1
Query: 208 AGKFFSDPEDDKGLKTSEDARFYALSRKFKPFSNE 312
A F S E KGL +SE Y+L P SN+
Sbjct: 263 ADSFLSHSESIKGLSSSEQGTVYSLKASHDP-SNQ 296
>SPAC20G8.02 |||phospholipase|Schizosaccharomyces pombe|chr
1|||Manual
Length = 757
Score = 25.0 bits (52), Expect = 9.9
Identities = 14/47 (29%), Positives = 20/47 (42%)
Frame = +1
Query: 193 KFKLTAGKFFSDPEDDKGLKTSEDARFYALSRKFKPFSNEGKPLVVQ 333
K LT +S+ D G+ FY + P S +PLVV+
Sbjct: 578 KTNLTRSLSYSEQSFDSGVSILSCQNFYNIFHPTDPISYRVEPLVVK 624
>SPAC23G3.05c |||regulator of G-protein signaling
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 343
Score = 25.0 bits (52), Expect = 9.9
Identities = 17/69 (24%), Positives = 32/69 (46%)
Frame = +1
Query: 379 LKVFDCKLEXKDMHGETPYEIMFGPDICGPGTKKVHVIFSYKGKNHLIKKDIRCKDDVYT 558
+K+F + K + +P+E+M P + P K H + ++R +DV T
Sbjct: 154 VKMFTQIIIEKYFNPASPHEVMLPPQLVQP---------ILDCKEHQRQDELRLFEDVET 204
Query: 559 HLYTLIVKP 585
+L ++KP
Sbjct: 205 YLLNFLLKP 213
>SPAC11E3.01c |swr1|SPAC2H10.03c|SNF2 family helicase
Swr1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1288
Score = 25.0 bits (52), Expect = 9.9
Identities = 13/40 (32%), Positives = 15/40 (37%)
Frame = +1
Query: 250 KTSEDARFYALSRKFKPFSNEGKPLVVQFTVKHEQDIDCG 369
KT Y +SRK P L + F K DCG
Sbjct: 952 KTIPRDLLYEVSRKINPLHQASTRLAIAFPDKRLLQYDCG 991
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,810,720
Number of Sequences: 5004
Number of extensions: 60764
Number of successful extensions: 213
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 205
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 210
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 305854096
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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