Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP02_F_M03
(668 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC4C5.02c |ryh1|hos1|GTPase Ryh1|Schizosaccharomyces pombe|chr... 278 5e-76
SPAC6F6.15 |ypt5||GTPase Ypt5|Schizosaccharomyces pombe|chr 1|||... 152 4e-38
SPAC18G6.03 |ypt3||GTPase Ypt3|Schizosaccharomyces pombe|chr 1||... 149 5e-37
SPBC1703.10 |ypt1||GTPase Ypt1|Schizosaccharomyces pombe|chr 2||... 141 7e-35
SPAC9E9.07c |ypt2||GTPase Ypt2 |Schizosaccharomyces pombe|chr 1|... 137 1e-33
SPAC1B3.11c |ypt4||GTPase Ypt4|Schizosaccharomyces pombe|chr 1||... 126 2e-30
SPBC405.04c |ypt7||GTPase Ypt7|Schizosaccharomyces pombe|chr 2||... 115 5e-27
SPAPB1A10.10c |ypt71||GTPase Ypt71|Schizosaccharomyces pombe|chr... 108 6e-25
SPAC17H9.09c |ras1|ste5|GTPase Ras1|Schizosaccharomyces pombe|ch... 93 3e-20
SPBC428.16c |rhb1||Rheb GTPase Rhb1|Schizosaccharomyces pombe|ch... 82 8e-17
SPBC1289.03c |spi1||Ran GTPase Spi1|Schizosaccharomyces pombe|ch... 78 1e-15
SPAC1565.06c |spg1|sid3|GTPase Spg1|Schizosaccharomyces pombe|ch... 75 9e-15
SPAC23C4.08 |rho3||Rho family GTPase Rho3|Schizosaccharomyces po... 73 5e-14
SPAC1F7.04 |rho1||Rho family GTPase Rho1|Schizosaccharomyces pom... 72 9e-14
SPAC20H4.11c |rho5||Rho family GTPase Rho5|Schizosaccharomyces p... 71 1e-13
SPAC16.01 |rho2||Rho family GTPase Rho2|Schizosaccharomyces pomb... 71 2e-13
SPAC16A10.04 |rho4||Rho family GTPase Rho4|Schizosaccharomyces p... 64 1e-11
SPAC110.03 |cdc42||Rho family GTPase Cdc42|Schizosaccharomyces p... 62 5e-11
SPBC1539.08 |||ADP-ribosylation factor, Arf family|Schizosacchar... 44 2e-05
SPBC4F6.18c |arf1||ADP-ribosylation factor Arf1|Schizosaccharomy... 41 1e-04
SPAC22F3.05c |alp41||ADP-ribosylation factor Alp41|Schizosacchar... 39 7e-04
SPCC320.04c |||GTPase Gem1 |Schizosaccharomyces pombe|chr 3|||Ma... 37 0.003
SPBC31F10.06c |sar1||ADP-ribosylation factor Sar1|Schizosaccharo... 30 0.35
SPAC24C9.15c |spn5|mde9, meu28|septin Spn5|Schizosaccharomyces p... 28 1.4
SPAC22H10.09 |||sequence orphan|Schizosaccharomyces pombe|chr 1|... 27 1.8
SPCC794.04c |||membrane transporter|Schizosaccharomyces pombe|ch... 26 4.3
SPAC9G1.10c |||inositol polyphosphate phosphatase |Schizosacchar... 26 4.3
SPAC4F10.07c |atg13|apg13, mug78|autophagy associated protein At... 26 5.6
SPBC337.13c |gtr1||Gtr1/RagA G protein Gtr1|Schizosaccharomyces ... 26 5.6
SPAP27G11.10c |nup184||nucleoporin Nup184|Schizosaccharomyces po... 26 5.6
SPBC1271.15c |||translation initiation factor IF-2Mt|Schizosacch... 26 5.6
SPACUNK4.06c |rpb7|SPAPYUK71.02|DNA-directed RNA polymerase comp... 26 5.6
SPBPB2B2.18 |||dubious|Schizosaccharomyces pombe|chr 2|||Manual 25 7.5
SPAC8E11.04c |||phospholipase |Schizosaccharomyces pombe|chr 1||... 25 9.9
SPAC24C9.11 |||MIF4G/MA4 domain protein|Schizosaccharomyces pomb... 25 9.9
>SPAC4C5.02c |ryh1|hos1|GTPase Ryh1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 201
Score = 278 bits (682), Expect = 5e-76
Identities = 134/171 (78%), Positives = 148/171 (86%)
Frame = +3
Query: 156 SGEFGNPLRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIXFLSXTMYLEDRTVR 335
S + LRKFKLVFLGEQSVGKTSLITRFMYD FDNTYQATIGI FLS TMYLEDRTVR
Sbjct: 2 SENYSFSLRKFKLVFLGEQSVGKTSLITRFMYDQFDNTYQATIGIDFLSKTMYLEDRTVR 61
Query: 336 LQLWDTAGQERFRSLIPSYIRDSTVAVVVYDITNANSFHQTSKWIDDVRTERGSDVIIML 515
LQLWDTAGQERFRSLIPSYIRDS+VA++VYDITN NSF T KWI+DVR ERG DVII+L
Sbjct: 62 LQLWDTAGQERFRSLIPSYIRDSSVAIIVYDITNHNSFVNTEKWIEDVRAERGDDVIIVL 121
Query: 516 VGNKTDLSDKRXVSTEEGDXKAXELNVMFIETSAKAGYNVKQLFRRVAAAL 668
VGNKTDL+DKR V+ EEG+ KA EL +M +ETSAKAG+NVK LFR++A L
Sbjct: 122 VGNKTDLADKRQVTQEEGEKKAKELKIMHMETSAKAGHNVKLLFRKIAQML 172
>SPAC6F6.15 |ypt5||GTPase Ypt5|Schizosaccharomyces pombe|chr
1|||Manual
Length = 211
Score = 152 bits (369), Expect = 4e-38
Identities = 72/162 (44%), Positives = 109/162 (67%), Gaps = 2/162 (1%)
Frame = +3
Query: 189 KLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIXFLSXTMYLEDRT-VRLQLWDTAGQE 365
KLV LG+ +VGK+SL+ RF+ D FD+ ++TIG FL+ T+ +++ T V+L++WDTAGQE
Sbjct: 16 KLVLLGDSAVGKSSLVLRFVKDQFDDYRESTIGAAFLTQTLPIDENTSVKLEIWDTAGQE 75
Query: 366 RFRSLIPSYIRDSTVAVVVYDITNANSFHQTSKWIDDVRTERGSDVIIMLVGNKTDLS-D 542
R++SL P Y R++ A+VVYDIT A S + WI +++ + ++I L GNK DL+ +
Sbjct: 76 RYKSLAPMYYRNANCAIVVYDITQAASLEKAKSWIKELQRQAPEGIVIALAGNKLDLAQE 135
Query: 543 KRXVSTEEGDXKAXELNVMFIETSAKAGYNVKQLFRRVAAAL 668
+R V + + A E N++F ETSAK NV +LF +A L
Sbjct: 136 RRAVEKADAEAYAAEANLLFFETSAKTAENVNELFTAIAKKL 177
>SPAC18G6.03 |ypt3||GTPase Ypt3|Schizosaccharomyces pombe|chr
1|||Manual
Length = 214
Score = 149 bits (360), Expect = 5e-37
Identities = 68/157 (43%), Positives = 105/157 (66%)
Frame = +3
Query: 186 FKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIXFLSXTMYLEDRTVRLQLWDTAGQE 365
FK V +G+ VGK++L+ RF + F+ ++TIG+ F + + L+++ ++ Q+WDTAGQE
Sbjct: 11 FKTVLIGDSGVGKSNLLMRFTRNEFNIESKSTIGVEFATRNIVLDNKKIKAQIWDTAGQE 70
Query: 366 RFRSLIPSYIRDSTVAVVVYDITNANSFHQTSKWIDDVRTERGSDVIIMLVGNKTDLSDK 545
R+R++ +Y R + A++VYDIT +SF +W+ ++R S+++IMLVGNKTDL
Sbjct: 71 RYRAITSAYYRGAVGALIVYDITKQSSFDNVGRWLKELREHADSNIVIMLVGNKTDLLHL 130
Query: 546 RXVSTEEGDXKAXELNVMFIETSAKAGYNVKQLFRRV 656
R VSTEE A E N+ FIETSA NV++ F+ V
Sbjct: 131 RAVSTEEAQAFAAENNLSFIETSAMDASNVEEAFQTV 167
>SPBC1703.10 |ypt1||GTPase Ypt1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 203
Score = 141 bits (342), Expect = 7e-35
Identities = 66/154 (42%), Positives = 99/154 (64%)
Frame = +3
Query: 186 FKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIXFLSXTMYLEDRTVRLQLWDTAGQE 365
FKL+ +G+ VGK+ L+ RF D++ +Y +TIG+ F T LE +TV+LQ+WDTAGQE
Sbjct: 9 FKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTFELEGKTVKLQIWDTAGQE 68
Query: 366 RFRSLIPSYIRDSTVAVVVYDITNANSFHQTSKWIDDVRTERGSDVIIMLVGNKTDLSDK 545
RFR++ SY R + ++VYD+T+ +SF+ +W+ ++ V +LVGNK+D+ DK
Sbjct: 69 RFRTITSSYYRGAHGIIIVYDVTDQDSFNNVKQWLQEIDRYAVEGVNRLLVGNKSDMVDK 128
Query: 546 RXVSTEEGDXKAXELNVMFIETSAKAGYNVKQLF 647
+ V A LN+ F+ETSAK NV+Q F
Sbjct: 129 KVVEYSVAKEFADSLNIPFLETSAKDSTNVEQAF 162
>SPAC9E9.07c |ypt2||GTPase Ypt2 |Schizosaccharomyces pombe|chr
1|||Manual
Length = 200
Score = 137 bits (332), Expect = 1e-33
Identities = 65/157 (41%), Positives = 96/157 (61%)
Frame = +3
Query: 189 KLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIXFLSXTMYLEDRTVRLQLWDTAGQER 368
KL+ +G+ VGK+ L+ RF DSF ++ TIGI F T+ L+ + ++LQ+WDTAGQER
Sbjct: 11 KLLLIGDSGVGKSCLLLRFSEDSFTPSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQER 70
Query: 369 FRSLIPSYIRDSTVAVVVYDITNANSFHQTSKWIDDVRTERGSDVIIMLVGNKTDLSDKR 548
FR++ +Y R + +++YD+T+ SF W +V +V +L+GNK D D+R
Sbjct: 71 FRTITTAYYRGAMGILLLYDVTDKKSFDNVRTWFSNVEQHASENVYKILIGNKCDCEDQR 130
Query: 549 XVSTEEGDXKAXELNVMFIETSAKAGYNVKQLFRRVA 659
VS E+G A EL V F+E SAK NV + F +A
Sbjct: 131 QVSFEQGQALADELGVKFLEASAKTNVNVDEAFFTLA 167
>SPAC1B3.11c |ypt4||GTPase Ypt4|Schizosaccharomyces pombe|chr
1|||Manual
Length = 234
Score = 126 bits (305), Expect = 2e-30
Identities = 63/165 (38%), Positives = 101/165 (61%), Gaps = 5/165 (3%)
Frame = +3
Query: 189 KLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIXF----LSXTMYLEDRTVRLQLWDTA 356
K+V G GK+ L+ RF+ + +D+ T+GI F +S M + + ++LQ+WDTA
Sbjct: 11 KIVLAGPSGTGKSCLLQRFVKNQWDDQVSHTVGIDFASRIISVGMGNQQKRIKLQIWDTA 70
Query: 357 GQERFRSLIPSYIRDSTVAVVVYDITNANSFHQTSKWIDDVRTERGSDVIIMLVGNKTDL 536
GQE+FRS+ +Y R + AV+VYD+TN +SF + S W+ D+R S + ++L G+K+DL
Sbjct: 71 GQEKFRSVARNYYRGAAGAVLVYDVTNKDSFEELSSWLSDIRAMAPSTICVVLAGSKSDL 130
Query: 537 SDKRXVSTEEGDXKAXELNVMFI-ETSAKAGYNVKQLFRRVAAAL 668
++R VSTEE E ++ ETS+ G NV++ F V + +
Sbjct: 131 QNQRQVSTEEAAEFCSEKHISSAHETSSYTGSNVEECFLSVVSTI 175
>SPBC405.04c |ypt7||GTPase Ypt7|Schizosaccharomyces pombe|chr
2|||Manual
Length = 205
Score = 115 bits (277), Expect = 5e-27
Identities = 63/170 (37%), Positives = 94/170 (55%), Gaps = 6/170 (3%)
Frame = +3
Query: 168 GNPLRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIXFLSXTMYLEDRTVRLQLW 347
G K++ LGE VGKTS++ +++ F Y+ATIG FL+ + ++D+ V LQLW
Sbjct: 3 GKKKHLLKVIILGESGVGKTSIMNQYVNRKFSKDYKATIGADFLTKEVLVDDKVVTLQLW 62
Query: 348 DTAGQERFRSLIPSYIRDSTVAVVVYDITNANSFHQTSKWIDDVRTERG----SDVIIML 515
DTAGQERF+SL ++ R + V+VYD+ N+ SF W D+ + +L
Sbjct: 63 DTAGQERFQSLGVAFYRGADCCVLVYDVNNSKSFETLDSWRDEFLIQASPSNPETFPFIL 122
Query: 516 VGNKTDLSD-KRXVSTEEG-DXKAXELNVMFIETSAKAGYNVKQLFRRVA 659
+GNK D+ + KR VS + + + ETSAK NV++ F VA
Sbjct: 123 LGNKVDVEEQKRMVSKSKALAFCQARGEIPYFETSAKEAINVQEAFETVA 172
>SPAPB1A10.10c |ypt71||GTPase Ypt71|Schizosaccharomyces pombe|chr
1|||Manual
Length = 208
Score = 108 bits (260), Expect = 6e-25
Identities = 61/164 (37%), Positives = 89/164 (54%), Gaps = 7/164 (4%)
Frame = +3
Query: 189 KLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIXFLSXTMYLEDRTVRLQLWDTAGQER 368
K+V LG+ VGKT L+ +F+ F Y+ATIG FL+ + ++D+ V LQLWDTAGQER
Sbjct: 10 KVVILGDSGVGKTCLMNQFVNQKFSREYKATIGADFLTKDVVVDDKLVTLQLWDTAGQER 69
Query: 369 FRSLIPSYIRDSTVAVVVYDITNANSFHQTSKWIDDVRTERGSDVI---IMLVGNKTDL- 536
F+SL ++ R + V+VY++ N+ SF W + + D ++VGN+ D
Sbjct: 70 FQSLGMAFYRGADCCVIVYNVNNSKSFDSVENWRQEFLYQTSQDECAFPFIIVGNQIDKD 129
Query: 537 SDKRXVSTEEG---DXKAXELNVMFIETSAKAGYNVKQLFRRVA 659
+ KR VS N++ E SAK NV LF V+
Sbjct: 130 ASKRAVSLHRALDYCKSKHGSNMIHFEASAKENTNVTDLFETVS 173
>SPAC17H9.09c |ras1|ste5|GTPase Ras1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 219
Score = 93.1 bits (221), Expect = 3e-20
Identities = 51/158 (32%), Positives = 88/158 (55%), Gaps = 1/158 (0%)
Frame = +3
Query: 177 LRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIXFLSXTMYLEDRTVRLQLWDTA 356
LR++KLV +G+ VGK++L + + F + Y TI + ++ L + DTA
Sbjct: 6 LREYKLVVVGDGGVGKSALTIQLIQSHFVDEYDPTIEDSYRKKCE-IDGEGALLDVLDTA 64
Query: 357 GQERFRSLIPSYIRDSTVAVVVYDITNANSFHQTSKWIDDVRTERGSDVI-IMLVGNKTD 533
GQE + ++ Y+R ++VY+IT+ +SF + S + + + D ++LV NK D
Sbjct: 65 GQEEYSAMREQYMRTGEGFLLVYNITSRSSFDEISTFYQQILRVKDKDTFPVVLVANKCD 124
Query: 534 LSDKRXVSTEEGDXKAXELNVMFIETSAKAGYNVKQLF 647
L +R VS EG+ A ++ +++ETSAK NV++ F
Sbjct: 125 LEAERVVSRAEGEQLAKSMHCLYVETSAKLRLNVEEAF 162
>SPBC428.16c |rhb1||Rheb GTPase Rhb1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 185
Score = 81.8 bits (193), Expect = 8e-17
Identities = 51/166 (30%), Positives = 86/166 (51%), Gaps = 1/166 (0%)
Frame = +3
Query: 174 PLRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIXFLSXTMYLEDRTVRLQLWDT 353
P++ ++ LG +SVGK+SL +++ + F +Y TI F Y + + ++ DT
Sbjct: 3 PIKSRRIAVLGSRSVGKSSLTVQYVENHFVESYYPTIENTFSKNIKY-KGQEFATEIIDT 61
Query: 354 AGQERFRSLIPSYIRDSTVAVVVYDITNANSFHQTSKWIDDVRTERGSD-VIIMLVGNKT 530
AGQ+ + L + V+VY IT+ +SF D + G++ V I++VGNK+
Sbjct: 62 AGQDEYSILNSKHSIGIHGYVLVYSITSKSSFEMVKIVRDKILNHTGTEWVPIVVVGNKS 121
Query: 531 DLSDKRXVSTEEGDXKAXELNVMFIETSAKAGYNVKQLFRRVAAAL 668
DL +R V+ EEG A E + E SA+ NV + F + + +
Sbjct: 122 DLHMQRAVTAEEGKALANEWKCAWTEASARHNENVARAFELIISEI 167
>SPBC1289.03c |spi1||Ran GTPase Spi1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 216
Score = 78.2 bits (184), Expect = 1e-15
Identities = 42/161 (26%), Positives = 80/161 (49%)
Frame = +3
Query: 186 FKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIXFLSXTMYLEDRTVRLQLWDTAGQE 365
FKLV +G+ GKT+ + R + F+ Y AT+G+ + + +WDTAGQE
Sbjct: 10 FKLVLVGDGGTGKTTFVKRHLTGEFEKKYIATLGVEVHPLHFHTNFGEICFNVWDTAGQE 69
Query: 366 RFRSLIPSYIRDSTVAVVVYDITNANSFHQTSKWIDDVRTERGSDVIIMLVGNKTDLSDK 545
+ L Y ++++D+T+ ++ W D+ ++ I+L GNK D+ ++
Sbjct: 70 KLGGLRDGYYIQGQCGIIMFDVTSRITYKNVPHWWRDL-VRVCENIPIVLCGNKVDVKER 128
Query: 546 RXVSTEEGDXKAXELNVMFIETSAKAGYNVKQLFRRVAAAL 668
+ + + + N+ + + SAK+ YN ++ F +A L
Sbjct: 129 KVKA--KAITFHRKKNLQYYDISAKSNYNFEKPFLWLARKL 167
>SPAC1565.06c |spg1|sid3|GTPase Spg1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 198
Score = 74.9 bits (176), Expect = 9e-15
Identities = 40/164 (24%), Positives = 80/164 (48%), Gaps = 6/164 (3%)
Frame = +3
Query: 189 KLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIXFLSXTMYLEDRTVRLQLWDTAGQER 368
K+ +G+ S+GKTSL+ ++ SFD T+G+ F+ T+ + + + +WD GQ
Sbjct: 12 KVGMIGDSSIGKTSLMVTYVQGSFDEESTQTLGVNFMEKTISIRNTEITFSIWDLGGQRE 71
Query: 369 FRSLIPSYIRDSTVAVVVYDITNANSFHQTSKWIDDVRTERGSDVIIMLVGNKTD----- 533
F +++P D+ + ++D++ ++ + +W R + V I L+G K D
Sbjct: 72 FVNMLPMVCNDAVAILFMFDLSRKSTLNSIKEWYRQARGFNKTAVPI-LIGTKYDHFMTF 130
Query: 534 -LSDKRXVSTEEGDXKAXELNVMFIETSAKAGYNVKQLFRRVAA 662
D+ + T++ A + + S NV+++F+ V A
Sbjct: 131 PREDQEEI-TKQARRYAKAMKASLVFCSTSHSINVQKIFKIVLA 173
>SPAC23C4.08 |rho3||Rho family GTPase Rho3|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 205
Score = 72.5 bits (170), Expect = 5e-14
Identities = 49/167 (29%), Positives = 83/167 (49%), Gaps = 10/167 (5%)
Frame = +3
Query: 189 KLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIXFLSXTMYLEDRTVRLQLWDTAGQER 368
K+V LG+ + GKTSL+ F F Y+ TI ++ ++++ ++ L LWDTAGQE
Sbjct: 15 KIVILGDGAAGKTSLLNVFTKGYFPQVYEPTIFENYIHD-IFVDGNSIELSLWDTAGQEE 73
Query: 369 FRSLIPSYIRDSTVAVVVYDITNANSFHQT-SKWIDDVRTERGSDVIIMLVGNKTDL--- 536
+ L D+ V ++ + + + +S +KW+ +V + V ++LV K DL
Sbjct: 74 YDQLRSLSYSDTHVIMICFAVDSRDSLENVITKWLPEV-SSNCPGVKLVLVALKCDLRGA 132
Query: 537 -----SDKRXVSTEEGDXKAXELN-VMFIETSAKAGYNVKQLFRRVA 659
+ + EEG A ++N V ++E SAK V + F A
Sbjct: 133 DEEQVDHSKIIDYEEGLAAAKKINAVRYLECSAKLNRGVNEAFTEAA 179
>SPAC1F7.04 |rho1||Rho family GTPase Rho1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 202
Score = 71.7 bits (168), Expect = 9e-14
Identities = 53/173 (30%), Positives = 86/173 (49%), Gaps = 14/173 (8%)
Frame = +3
Query: 189 KLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIXFLSXTMYLEDRTVRLQLWDTAGQER 368
KLV +G+ + GKT L+ F +F Y T+ +++ + ++ R V L LWDTAGQE
Sbjct: 8 KLVIVGDGACGKTCLLIVFSKGTFPEVYVPTVFENYVAD-VEVDGRHVELALWDTAGQED 66
Query: 369 FRSLIPSYIRDSTVAVVVYDITNANSFHQT-SKWIDDVRTERGSDVIIMLVGNKTDL--- 536
+ L P DS V ++ + + + +S KWI +V S + I+LV K DL
Sbjct: 67 YDRLRPLSYPDSHVILICFAVDSPDSLDNVQEKWISEV-LHFCSSLPILLVACKADLRND 125
Query: 537 ---------SDKRXVSTEEGDXKAXELNV-MFIETSAKAGYNVKQLFRRVAAA 665
+++ V+TEEG A ++ ++E SAK V+++F A
Sbjct: 126 PKIIEELSKTNQHPVTTEEGQAVAQKIGAYKYLECSAKTNEGVREVFESATRA 178
>SPAC20H4.11c |rho5||Rho family GTPase Rho5|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 200
Score = 71.3 bits (167), Expect = 1e-13
Identities = 52/173 (30%), Positives = 85/173 (49%), Gaps = 14/173 (8%)
Frame = +3
Query: 189 KLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIXFLSXTMYLEDRTVRLQLWDTAGQER 368
KLV +G+ + GKT L+ F +F Y T+ +++ + ++ R + L LWDTAGQE
Sbjct: 8 KLVIVGDGACGKTCLLIVFSKGTFPEVYVPTVFENYVAD-VEVDGRHIELALWDTAGQED 66
Query: 369 FRSLIPSYIRDSTVAVVVYDITNANSFHQT-SKWIDDVRTERGSDVIIMLVGNKTDL--- 536
+ L P DS V ++ + + S KWI +V S++ I+LVG K DL
Sbjct: 67 YDRLRPLSYPDSHVVLICFSVDAPESLDNVQEKWISEV-LHFCSNLPILLVGCKVDLRND 125
Query: 537 ---------SDKRXVSTEEGDXKAXELNV-MFIETSAKAGYNVKQLFRRVAAA 665
+ ++ ++ EEG A ++ ++E SAK V ++F A A
Sbjct: 126 PKTIEELSKTSQKPITFEEGQVVAQKIGAYKYLECSAKLNEGVNEVFETAARA 178
>SPAC16.01 |rho2||Rho family GTPase Rho2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 200
Score = 70.5 bits (165), Expect = 2e-13
Identities = 43/122 (35%), Positives = 70/122 (57%), Gaps = 1/122 (0%)
Frame = +3
Query: 174 PLRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIXFLSXTMYLEDRTVRLQLWDT 353
P+R+ KLV +G+ + GKTSL++ F F Y T+ ++S ++ ++V+L LWDT
Sbjct: 6 PIRR-KLVVVGDGACGKTSLLSVFTLGYFPTEYVPTVFENYVSDCR-VDGKSVQLALWDT 63
Query: 354 AGQERFRSLIPSYIRDSTVAVVVYDITNANSFHQTS-KWIDDVRTERGSDVIIMLVGNKT 530
AGQE + L P + + +V + I + +S S KWI+++ T +V +LVG K
Sbjct: 64 AGQEEYERLRPMSYAKAHIILVGFAIDSPDSLENVSTKWIEEINT-LCPNVPFILVGMKA 122
Query: 531 DL 536
DL
Sbjct: 123 DL 124
>SPAC16A10.04 |rho4||Rho family GTPase Rho4|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 203
Score = 64.5 bits (150), Expect = 1e-11
Identities = 49/168 (29%), Positives = 77/168 (45%), Gaps = 14/168 (8%)
Frame = +3
Query: 189 KLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIXFLSXTMY-LEDRTVRLQLWDTAGQE 365
KLV +G+ GKT L+ F +F Y T+ +++ Y + + L LWDTAGQE
Sbjct: 16 KLVVVGDGGCGKTCLLIVFSSGTFPERYVPTVFENYITDITYGPNSKVIELALWDTAGQE 75
Query: 366 RFRSLIPSYIRDSTVAVVVYDITNANSFHQ-TSKWIDDVRTERGSDVIIMLVGNKTDLSD 542
+ L P +S V ++ + I S + T KW +V+ I+LVG K DL
Sbjct: 76 EYDRLRPLSYPNSNVILLCFSIDCPASLNNVTEKWYPEVQ-HFCPRTPIVLVGLKADLRK 134
Query: 543 KR------------XVSTEEGDXKAXELNVMFIETSAKAGYNVKQLFR 650
R V+ ++ A +N ++E SAK V ++F+
Sbjct: 135 DRNATEVLRTQGLTPVTYQQAQSVALSMNAPYVECSAKENTGVNEVFQ 182
>SPAC110.03 |cdc42||Rho family GTPase Cdc42|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 192
Score = 62.5 bits (145), Expect = 5e-11
Identities = 51/175 (29%), Positives = 84/175 (48%), Gaps = 15/175 (8%)
Frame = +3
Query: 189 KLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIXFLSXTMYLEDRTVRLQLWDTAGQER 368
K V +G+ +VGKT L+ + + F + Y T+ + + T+ + D L L+DTAGQE
Sbjct: 5 KCVVVGDGAVGKTCLLISYTTNKFPSDYVPTVFDNY-AVTVMIGDEPYTLGLFDTAGQED 63
Query: 369 FRSLIPSYIRDSTVAVVVYDITNANSFHQT-SKWIDDVRTERGSDVIIMLVGNKTDLSD- 542
+ L P + V +V + +T+ SF KW +V V ++VG + DL D
Sbjct: 64 YDRLRPLSYPQTDVFLVCFSVTSPASFENVKEKWFPEVH-HHCPGVPCLIVGTQIDLRDD 122
Query: 543 -----------KRXVSTEEGDXKAXELN-VMFIETSAKAGYNVKQLF-RRVAAAL 668
+ ++ E+G+ A EL V ++E SA +K +F + AAL
Sbjct: 123 PSVQQKLARQHQHPLTHEQGERLARELGAVKYVECSALTQKGLKNVFDEAIVAAL 177
>SPBC1539.08 |||ADP-ribosylation factor, Arf
family|Schizosaccharomyces pombe|chr 2|||Manual
Length = 184
Score = 44.0 bits (99), Expect = 2e-05
Identities = 25/120 (20%), Positives = 59/120 (49%), Gaps = 1/120 (0%)
Frame = +3
Query: 180 RKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIXFLSXTMYLEDRTVRLQLWDTAG 359
++ +++ LG + GKT+++ + + T T+G + T + ++ +WD G
Sbjct: 20 KEMRILMLGLDAAGKTTILYKLKLNQSVVTIP-TVGFNVETVTY----KNIKFNVWDVGG 74
Query: 360 QERFRSLIPSYIRDSTVAVVVYDITNANSFHQTSKWIDDVRTERG-SDVIIMLVGNKTDL 536
Q++ R L Y + + V D ++N + + + + ++R D +++++ NK DL
Sbjct: 75 QDKIRPLWRHYFTGTKGLIFVVDSADSNRISEARQELHRIISDREMRDCLLLVLANKQDL 134
>SPBC4F6.18c |arf1||ADP-ribosylation factor Arf1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 180
Score = 41.1 bits (92), Expect = 1e-04
Identities = 26/120 (21%), Positives = 55/120 (45%), Gaps = 1/120 (0%)
Frame = +3
Query: 180 RKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIXFLSXTMYLEDRTVRLQLWDTAG 359
R+ +++ +G + GKT+++ + T TIG + +E R + +WD G
Sbjct: 16 REMRILMVGLDAAGKTTILYKLKLGEIVTTIP-TIGFNVET----VEYRNISFTVWDVGG 70
Query: 360 QERFRSLIPSYIRDSTVAVVVYDITNANSFHQTSKWIDDVRTE-RGSDVIIMLVGNKTDL 536
Q++ R L Y +++ + V D + + + + + E D ++++ NK DL
Sbjct: 71 QDKIRPLWRHYFQNTQGIIFVVDSNDRERISEAHEELQRMLNEDELRDALLLVFANKQDL 130
>SPAC22F3.05c |alp41||ADP-ribosylation factor
Alp41|Schizosaccharomyces pombe|chr 1|||Manual
Length = 186
Score = 38.7 bits (86), Expect = 7e-04
Identities = 33/157 (21%), Positives = 65/157 (41%), Gaps = 4/157 (2%)
Frame = +3
Query: 180 RKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIXFLSXTMYLEDRTVRLQLWDTAG 359
R+ +++ LG + GKT+++ + + N T G + LE +R +WD G
Sbjct: 15 REVRVLLLGLDNAGKTTILKCLLNEDV-NEVSPTFGFQIRT----LEVEGLRFTIWDIGG 69
Query: 360 QERFRSLIPSYIRDSTVAVVVYDITNANSFHQTSKWIDDVRT-ERGSDVIIMLVGNKTDL 536
Q+ R+ +Y + + V D + + + ++ E+ I+++ NK+D+
Sbjct: 70 QKTLRNFWKNYFESTEAIIWVVDSLDDLRLEECRNTLQELLVEEKLLFTSILVLANKSDV 129
Query: 537 S---DKRXVSTEEGDXKAXELNVMFIETSAKAGYNVK 638
S +S K + SA G N+K
Sbjct: 130 SGALSSEEISKILNISKYKSSHWRIFSVSALTGLNIK 166
>SPCC320.04c |||GTPase Gem1 |Schizosaccharomyces pombe|chr
3|||Manual
Length = 630
Score = 36.7 bits (81), Expect = 0.003
Identities = 35/132 (26%), Positives = 64/132 (48%), Gaps = 2/132 (1%)
Frame = +3
Query: 177 LRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIXFLSXTMYLEDRTVRLQLWDTA 356
+++ ++V G+Q VGK+SLI+ + + + I + D V L L DT
Sbjct: 1 MKEVRVVICGDQGVGKSSLISALIQEDNVTSIPKVFPIISIPSNPDSND-DVSLVLVDTQ 59
Query: 357 GQERFRSLIPSYIRDSTVAVVVYDITNANSFHQTS-KWIDDVRTERGSDVIIMLVGNKT- 530
R + + I+ + V +VY ++ S+ + S W+ R+ G +V I+L NK+
Sbjct: 60 SDSNEREYLAAEIKKANVICLVY--SDNYSYERVSIFWLPYFRS-LGVNVPIVLCENKSE 116
Query: 531 DLSDKRXVSTEE 566
DL + + + T E
Sbjct: 117 DLDNYQGLHTIE 128
>SPBC31F10.06c |sar1||ADP-ribosylation factor
Sar1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 190
Score = 29.9 bits (64), Expect = 0.35
Identities = 28/116 (24%), Positives = 49/116 (42%), Gaps = 1/116 (0%)
Frame = +3
Query: 189 KLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIXFLSXTMYLEDRTVRLQLWDTAGQER 368
K++FLG + GKT+L+ D Q T+ + L VR +D G ++
Sbjct: 22 KMLFLGLDNAGKTTLLHMLKNDRL-AVMQPTLH----PTSEELAIGNVRFTTFDLGGHQQ 76
Query: 369 FRSLIPSYIRDSTVAVVVYDITNANSFHQTSKWIDD-VRTERGSDVIIMLVGNKTD 533
R L Y + V + D + ++ +D + E + V +++GNK D
Sbjct: 77 ARRLWRDYFPEVNGIVYLVDCCDFERLSESKAELDALLAMEELARVPFLILGNKID 132
>SPAC24C9.15c |spn5|mde9, meu28|septin Spn5|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 464
Score = 27.9 bits (59), Expect = 1.4
Identities = 17/58 (29%), Positives = 29/58 (50%), Gaps = 2/58 (3%)
Frame = +3
Query: 192 LVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIXFLSXTMYLE--DRTVRLQLWDTAG 359
L+ +GE S+GKT+ + F+ S D ++ + F+ L D+ L + DT G
Sbjct: 121 LIVVGESSLGKTTFVNSFL-QSNDTNFRPKKTMDFVEHKATLSDGDQKFNLTIVDTPG 177
>SPAC22H10.09 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 646
Score = 27.5 bits (58), Expect = 1.8
Identities = 18/51 (35%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
Frame = +3
Query: 288 IXFLSXTMYLEDRTVRLQLWDTAGQE-RFRSLIPSYIRDSTVAVVVYDITN 437
I F + Y ED T + + +A + +F+SLI Y DST+A Y+ N
Sbjct: 27 ISFCTCKAYFEDNTSLSRRFFSAKKSLQFKSLIRKYSEDSTLAWRDYENYN 77
>SPCC794.04c |||membrane transporter|Schizosaccharomyces pombe|chr
3|||Manual
Length = 547
Score = 26.2 bits (55), Expect = 4.3
Identities = 16/80 (20%), Positives = 32/80 (40%)
Frame = +2
Query: 149 VYIG*IW*SFTQIQACLSRRTECWEDVSHH*IHVRQLRQYLSGNNWNXFSIEXYVLGRPY 328
+++G W + C S +C+ +++ + V +Y +G + Y +
Sbjct: 453 IFLG--WGFLYVLAVCYSYLVDCYHEMAASALSVATFTRYAAGGGMTIVARPMYNNLNYH 510
Query: 329 GATPAVGHCGPRAVPVPHTF 388
AT + G VP+P F
Sbjct: 511 WATSLLAFVGCGLVPIPFIF 530
>SPAC9G1.10c |||inositol polyphosphate phosphatase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1191
Score = 26.2 bits (55), Expect = 4.3
Identities = 9/9 (100%), Positives = 9/9 (100%)
Frame = +2
Query: 263 QYLSGNNWN 289
QYLSGNNWN
Sbjct: 1173 QYLSGNNWN 1181
>SPAC4F10.07c |atg13|apg13, mug78|autophagy associated protein Atg13
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 758
Score = 25.8 bits (54), Expect = 5.6
Identities = 18/58 (31%), Positives = 26/58 (44%)
Frame = +1
Query: 382 YLHT*EIRLWRLLFMISLTRTHSTRLRNGSTTFARSVVLTSSSCWSATRPISRTRGXS 555
Y +T + LW+L I R H T L+ G V+ S+ + PIS + G S
Sbjct: 182 YTYTHLMPLWKLKSKIHKLRAHGTSLKVGCALSTDDVL--SNDFLPISAPISSSLGSS 237
>SPBC337.13c |gtr1||Gtr1/RagA G protein Gtr1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 308
Score = 25.8 bits (54), Expect = 5.6
Identities = 30/89 (33%), Positives = 41/89 (46%), Gaps = 6/89 (6%)
Frame = +3
Query: 177 LRKFKLVFLGEQSVGKTSL--ITRFMYDSFDNT-YQATIGIXFLSXTMYLEDRTVRLQLW 347
+RK K++ +G GK+S+ I Y + D ATI I S +L + L LW
Sbjct: 1 MRK-KVLLMGRSGSGKSSMRSIVFSNYVAKDTRRLGATIDIEH-SHVRFLGNLV--LNLW 56
Query: 348 DTAGQERFRSLIPSYIRD---STVAVVVY 425
D GQE F S RD V V++Y
Sbjct: 57 DCGGQEAFMENYLSAQRDHIFRNVQVLIY 85
>SPAP27G11.10c |nup184||nucleoporin Nup184|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1564
Score = 25.8 bits (54), Expect = 5.6
Identities = 10/23 (43%), Positives = 16/23 (69%)
Frame = -2
Query: 268 VLSKLSYMNLVMRDVFPTLCSPR 200
+LS + +NL+ D+F T+ SPR
Sbjct: 819 LLSVMDLINLLYTDIFSTISSPR 841
>SPBC1271.15c |||translation initiation factor
IF-2Mt|Schizosaccharomyces pombe|chr 2|||Manual
Length = 686
Score = 25.8 bits (54), Expect = 5.6
Identities = 22/87 (25%), Positives = 36/87 (41%), Gaps = 2/87 (2%)
Frame = +3
Query: 174 PLRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIXFLSXTMYLEDRTVRLQLWDT 353
PLR + +G GKT+L+ F + +T I + T+ + + + DT
Sbjct: 168 PLRPPVVTLMGHVDHGKTTLLDAFRKSTIASTEHGGITQKIGAFTVPFDKGSKFITFLDT 227
Query: 354 AGQERFRSLIP--SYIRDSTVAVVVYD 428
G F ++ + I D V VV D
Sbjct: 228 PGHMAFEAMRKRGANIADIVVLVVAGD 254
>SPACUNK4.06c |rpb7|SPAPYUK71.02|DNA-directed RNA polymerase complex
II subunit Rpb7|Schizosaccharomyces pombe|chr 1|||Manual
Length = 172
Score = 25.8 bits (54), Expect = 5.6
Identities = 11/34 (32%), Positives = 22/34 (64%)
Frame = +3
Query: 471 DDVRTERGSDVIIMLVGNKTDLSDKRXVSTEEGD 572
+D E+GS+V + +VG +TD ++ ++T + D
Sbjct: 134 EDQVIEKGSNVRLKIVGTRTDATEIFAIATMKED 167
>SPBPB2B2.18 |||dubious|Schizosaccharomyces pombe|chr 2|||Manual
Length = 175
Score = 25.4 bits (53), Expect = 7.5
Identities = 17/61 (27%), Positives = 26/61 (42%)
Frame = +3
Query: 423 YDITNANSFHQTSKWIDDVRTERGSDVIIMLVGNKTDLSDKRXVSTEEGDXKAXELNVMF 602
++ N S Q DD+ T +GSD KT ++D S K+ E V+F
Sbjct: 67 HEPANVYSIEQRRSHDDDLPTIKGSDASTQQYERKTYITDASPESQNLFLSKSKEEGVIF 126
Query: 603 I 605
+
Sbjct: 127 L 127
>SPAC8E11.04c |||phospholipase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 224
Score = 25.0 bits (52), Expect = 9.9
Identities = 11/53 (20%), Positives = 27/53 (50%)
Frame = -2
Query: 439 ALVIS*TTTATVESLMYEGMRDRNRSWPAVSHSWSRTVRSSKYIVFDRKXIPI 281
+++I+ + T + G+ D + W ++++WS + K+I + IP+
Sbjct: 7 SVIINPSVAHTATVIFLHGLGDSGQGWSFMANTWS-NFKHIKWIFPNAPSIPV 58
>SPAC24C9.11 |||MIF4G/MA4 domain protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 775
Score = 25.0 bits (52), Expect = 9.9
Identities = 11/27 (40%), Positives = 16/27 (59%)
Frame = +3
Query: 558 TEEGDXKAXELNVMFIETSAKAGYNVK 638
TEEGD K+ ELN +++ K+ K
Sbjct: 60 TEEGDSKSSELNDDYLDAHRKSSTKKK 86
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,661,857
Number of Sequences: 5004
Number of extensions: 51841
Number of successful extensions: 185
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 155
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 174
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 305854096
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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