Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP02_F_L23
         (655 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM295015-1|CAL25730.1|  549|Tribolium castaneum ecdysone recepto...    23   2.2  
EF592538-1|ABQ95984.1|  582|Tribolium castaneum beta-N-acetylglu...    22   3.8  
AM292383-1|CAL23195.2|  320|Tribolium castaneum gustatory recept...    22   5.1  
AM292358-1|CAL23170.2|  331|Tribolium castaneum gustatory recept...    22   5.1  
AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory recept...    22   5.1  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    21   6.7  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    21   6.7  
EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetyla...    21   8.9  
EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetyla...    21   8.9  

>AM295015-1|CAL25730.1|  549|Tribolium castaneum ecdysone receptor
           (isoform A) protein.
          Length = 549

 Score = 23.0 bits (47), Expect = 2.2
 Identities = 9/27 (33%), Positives = 16/27 (59%)
 Frame = -2

Query: 609 LFQKCSSKVQSFRIHTSVEIQSNKSCF 529
           L + CSS+V  FR+    ++Q++   F
Sbjct: 390 LLKACSSEVMMFRMARRYDVQTDSILF 416


>EF592538-1|ABQ95984.1|  582|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG3 protein.
          Length = 582

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 8/20 (40%), Positives = 10/20 (50%)
 Frame = +3

Query: 528 GSKTYCSVFRHWYVYGSFGP 587
           G +   S   HWY+   FGP
Sbjct: 452 GHRVIYSTVGHWYLDCGFGP 471


>AM292383-1|CAL23195.2|  320|Tribolium castaneum gustatory receptor
           candidate 62 protein.
          Length = 320

 Score = 21.8 bits (44), Expect = 5.1
 Identities = 8/24 (33%), Positives = 10/24 (41%)
 Frame = -1

Query: 529 PKTAEERCVVLXWPIXCTLYTXVL 458
           P T      V+ W   CT Y  +L
Sbjct: 229 PATIISNVTVISWQAVCTFYNILL 252


>AM292358-1|CAL23170.2|  331|Tribolium castaneum gustatory receptor
           candidate 37 protein.
          Length = 331

 Score = 21.8 bits (44), Expect = 5.1
 Identities = 8/24 (33%), Positives = 10/24 (41%)
 Frame = -1

Query: 529 PKTAEERCVVLXWPIXCTLYTXVL 458
           P T      V+ W   CT Y  +L
Sbjct: 229 PATIISNVTVISWQAVCTFYNILL 252


>AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory receptor
           candidate 32 protein.
          Length = 651

 Score = 21.8 bits (44), Expect = 5.1
 Identities = 8/24 (33%), Positives = 10/24 (41%)
 Frame = -1

Query: 529 PKTAEERCVVLXWPIXCTLYTXVL 458
           P T      V+ W   CT Y  +L
Sbjct: 549 PATIISNVTVISWQAVCTFYNILL 572


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
            protein.
          Length = 1464

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 9/17 (52%), Positives = 11/17 (64%)
 Frame = -1

Query: 646  LQPIGFCHQVFLALSKV 596
            L+PIGF   +F AL  V
Sbjct: 1280 LEPIGFVFLIFFALLMV 1296


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase CHS2
            protein.
          Length = 1464

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 9/17 (52%), Positives = 11/17 (64%)
 Frame = -1

Query: 646  LQPIGFCHQVFLALSKV 596
            L+PIGF   +F AL  V
Sbjct: 1280 LEPIGFVFLIFFALLMV 1296


>EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetylase
           2B protein.
          Length = 528

 Score = 21.0 bits (42), Expect = 8.9
 Identities = 6/13 (46%), Positives = 10/13 (76%)
 Frame = -3

Query: 158 HRSGHTVYIYTLT 120
           HR GH + +++LT
Sbjct: 239 HRRGHEIAVFSLT 251


>EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetylase
           2A protein.
          Length = 535

 Score = 21.0 bits (42), Expect = 8.9
 Identities = 6/13 (46%), Positives = 10/13 (76%)
 Frame = -3

Query: 158 HRSGHTVYIYTLT 120
           HR GH + +++LT
Sbjct: 246 HRRGHEIAVFSLT 258


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 141,591
Number of Sequences: 336
Number of extensions: 3078
Number of successful extensions: 11
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16865010
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)