Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP02_F_L23
(655 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC004430-1|AAH04430.1| 422|Homo sapiens proteasome (prosome, ma... 76 1e-13
BC000437-1|AAH00437.1| 422|Homo sapiens proteasome (prosome, ma... 76 1e-13
AK223196-1|BAD96916.1| 423|Homo sapiens proteasome 26S non-ATPa... 76 1e-13
AB003102-1|BAA19748.1| 422|Homo sapiens 26S proteasome subunit ... 76 1e-13
AF001212-1|AAB58732.1| 422|Homo sapiens 26S proteasome subunit ... 72 2e-12
BC042674-1|AAH42674.1| 423|Homo sapiens PLB1 protein protein. 30 6.3
AC074011-2|AAY24082.1| 423|Homo sapiens unknown protein. 30 6.3
BC025249-1|AAH25249.1| 574|Homo sapiens zinc finger and BTB dom... 30 8.3
AK027045-1|BAB15636.1| 574|Homo sapiens protein ( Homo sapiens ... 30 8.3
>BC004430-1|AAH04430.1| 422|Homo sapiens proteasome (prosome,
macropain) 26S subunit, non-ATPase, 11 protein.
Length = 422
Score = 76.2 bits (179), Expect = 1e-13
Identities = 34/52 (65%), Positives = 39/52 (75%)
Frame = +1
Query: 415 LFDFFLDLEAGIGIXVXLCKECIXWAXEERRTFLRQSLEARLIALYFDTGMY 570
L D FLD+EA G V LC ECI WA E+RTFLRQ+LEARL++LYFDT Y
Sbjct: 92 LLDLFLDMEAATGQEVELCLECIEWAKSEKRTFLRQALEARLVSLYFDTKRY 143
Score = 54.0 bits (124), Expect = 4e-07
Identities = 31/91 (34%), Positives = 48/91 (52%)
Frame = +3
Query: 147 AGAMLFERSRVSSSTNRDEDVRMTDKMVSTGELPEDDEXNIRAKEQGILNXXXXXXXXXX 326
A + F+R++ ST+R+ + + +V ++ E+DE ++ KEQ IL
Sbjct: 4 AAVVEFQRAQSLLSTDREASIDILHSIVKR-DIQENDEEAVQVKEQSILELGSLLAKTGQ 62
Query: 327 XXXXXXXXXXTRPFLSLISKAKAAKLVRSLV 419
RPFL+ ISKAKAA+LVRSL+
Sbjct: 63 AAELGGLLKYVRPFLNSISKAKAARLVRSLL 93
>BC000437-1|AAH00437.1| 422|Homo sapiens proteasome (prosome,
macropain) 26S subunit, non-ATPase, 11 protein.
Length = 422
Score = 76.2 bits (179), Expect = 1e-13
Identities = 34/52 (65%), Positives = 39/52 (75%)
Frame = +1
Query: 415 LFDFFLDLEAGIGIXVXLCKECIXWAXEERRTFLRQSLEARLIALYFDTGMY 570
L D FLD+EA G V LC ECI WA E+RTFLRQ+LEARL++LYFDT Y
Sbjct: 92 LLDLFLDMEAATGQEVELCLECIEWAKSEKRTFLRQALEARLVSLYFDTKRY 143
Score = 54.0 bits (124), Expect = 4e-07
Identities = 31/91 (34%), Positives = 48/91 (52%)
Frame = +3
Query: 147 AGAMLFERSRVSSSTNRDEDVRMTDKMVSTGELPEDDEXNIRAKEQGILNXXXXXXXXXX 326
A + F+R++ ST+R+ + + +V ++ E+DE ++ KEQ IL
Sbjct: 4 AAVVEFQRAQSLLSTDREASIDILHSIVKR-DIQENDEEAVQVKEQSILELGSLLAKTGQ 62
Query: 327 XXXXXXXXXXTRPFLSLISKAKAAKLVRSLV 419
RPFL+ ISKAKAA+LVRSL+
Sbjct: 63 AAELGGLLKYVRPFLNSISKAKAARLVRSLL 93
>AK223196-1|BAD96916.1| 423|Homo sapiens proteasome 26S non-ATPase
subunit 11 variant protein.
Length = 423
Score = 76.2 bits (179), Expect = 1e-13
Identities = 34/52 (65%), Positives = 39/52 (75%)
Frame = +1
Query: 415 LFDFFLDLEAGIGIXVXLCKECIXWAXEERRTFLRQSLEARLIALYFDTGMY 570
L D FLD+EA G V LC ECI WA E+RTFLRQ+LEARL++LYFDT Y
Sbjct: 92 LLDLFLDMEAATGQEVELCLECIEWAKSEKRTFLRQALEARLVSLYFDTKRY 143
Score = 54.0 bits (124), Expect = 4e-07
Identities = 31/91 (34%), Positives = 48/91 (52%)
Frame = +3
Query: 147 AGAMLFERSRVSSSTNRDEDVRMTDKMVSTGELPEDDEXNIRAKEQGILNXXXXXXXXXX 326
A + F+R++ ST+R+ + + +V ++ E+DE ++ KEQ IL
Sbjct: 4 AAVVEFQRAQSLLSTDREASIDILHSIVKR-DIQENDEEAVQVKEQSILELGSLLAKTGQ 62
Query: 327 XXXXXXXXXXTRPFLSLISKAKAAKLVRSLV 419
RPFL+ ISKAKAA+LVRSL+
Sbjct: 63 AAELGGLLKYVRPFLNSISKAKAARLVRSLL 93
>AB003102-1|BAA19748.1| 422|Homo sapiens 26S proteasome subunit
p44.5 protein.
Length = 422
Score = 76.2 bits (179), Expect = 1e-13
Identities = 34/52 (65%), Positives = 39/52 (75%)
Frame = +1
Query: 415 LFDFFLDLEAGIGIXVXLCKECIXWAXEERRTFLRQSLEARLIALYFDTGMY 570
L D FLD+EA G V LC ECI WA E+RTFLRQ+LEARL++LYFDT Y
Sbjct: 92 LLDLFLDMEAATGQEVELCLECIEWAKSEKRTFLRQALEARLVSLYFDTKRY 143
Score = 54.0 bits (124), Expect = 4e-07
Identities = 31/91 (34%), Positives = 48/91 (52%)
Frame = +3
Query: 147 AGAMLFERSRVSSSTNRDEDVRMTDKMVSTGELPEDDEXNIRAKEQGILNXXXXXXXXXX 326
A + F+R++ ST+R+ + + +V ++ E+DE ++ KEQ IL
Sbjct: 4 AAVVEFQRAQSLLSTDREASIDILHSIVKR-DIQENDEEAVQVKEQSILELGSLLAKTGQ 62
Query: 327 XXXXXXXXXXTRPFLSLISKAKAAKLVRSLV 419
RPFL+ ISKAKAA+LVRSL+
Sbjct: 63 AAELGGLLKYVRPFLNSISKAKAARLVRSLL 93
>AF001212-1|AAB58732.1| 422|Homo sapiens 26S proteasome subunit 9
protein.
Length = 422
Score = 72.1 bits (169), Expect = 2e-12
Identities = 33/52 (63%), Positives = 38/52 (73%)
Frame = +1
Query: 415 LFDFFLDLEAGIGIXVXLCKECIXWAXEERRTFLRQSLEARLIALYFDTGMY 570
L D FLD+EA G V LC E I WA E+RTFLRQ+LEARL++LYFDT Y
Sbjct: 92 LLDLFLDMEAATGQEVELCLESIEWAKSEKRTFLRQALEARLVSLYFDTKRY 143
Score = 54.0 bits (124), Expect = 4e-07
Identities = 31/91 (34%), Positives = 48/91 (52%)
Frame = +3
Query: 147 AGAMLFERSRVSSSTNRDEDVRMTDKMVSTGELPEDDEXNIRAKEQGILNXXXXXXXXXX 326
A + F+R++ ST+R+ + + +V ++ E+DE ++ KEQ IL
Sbjct: 4 AAVVEFQRAQSLLSTDREASIDILHSIVKR-DIQENDEEAVQVKEQSILELGSLLAKTGQ 62
Query: 327 XXXXXXXXXXTRPFLSLISKAKAAKLVRSLV 419
RPFL+ ISKAKAA+LVRSL+
Sbjct: 63 AAELGGLLKYVRPFLNSISKAKAARLVRSLL 93
>BC042674-1|AAH42674.1| 423|Homo sapiens PLB1 protein protein.
Length = 423
Score = 30.3 bits (65), Expect = 6.3
Identities = 16/40 (40%), Positives = 22/40 (55%)
Frame = -1
Query: 604 SKVQ*QGPKLPYTYQCRNTEQ*VLLPKTAEERCVVLXWPI 485
+K++ P+ PY Y RN+ LLP AEE VL W +
Sbjct: 349 AKLKCPSPESPYLYTLRNSR---LLPDQAEEAPEVLYWAV 385
>AC074011-2|AAY24082.1| 423|Homo sapiens unknown protein.
Length = 423
Score = 30.3 bits (65), Expect = 6.3
Identities = 16/40 (40%), Positives = 22/40 (55%)
Frame = -1
Query: 604 SKVQ*QGPKLPYTYQCRNTEQ*VLLPKTAEERCVVLXWPI 485
+K++ P+ PY Y RN+ LLP AEE VL W +
Sbjct: 349 AKLKCPSPESPYLYTLRNSR---LLPDQAEEAPEVLYWAV 385
>BC025249-1|AAH25249.1| 574|Homo sapiens zinc finger and BTB domain
containing 3 protein.
Length = 574
Score = 29.9 bits (64), Expect = 8.3
Identities = 17/39 (43%), Positives = 22/39 (56%), Gaps = 2/39 (5%)
Frame = -2
Query: 228 PFCQSCGRLRLCSSMMRRVIFQITSLRPY-CVY-LYAYT 118
P C++CG+ CS +RR T RPY C Y L +YT
Sbjct: 472 PTCKTCGKTFSCSYTLRRHATVHTRERPYECRYCLRSYT 510
>AK027045-1|BAB15636.1| 574|Homo sapiens protein ( Homo sapiens
cDNA: FLJ23392 fis, clone HEP17418. ).
Length = 574
Score = 29.9 bits (64), Expect = 8.3
Identities = 17/39 (43%), Positives = 22/39 (56%), Gaps = 2/39 (5%)
Frame = -2
Query: 228 PFCQSCGRLRLCSSMMRRVIFQITSLRPY-CVY-LYAYT 118
P C++CG+ CS +RR T RPY C Y L +YT
Sbjct: 472 PTCKTCGKTFSCSYTLRRHATVHTRERPYECRYCLRSYT 510
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 86,038,756
Number of Sequences: 237096
Number of extensions: 1744839
Number of successful extensions: 3311
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 3116
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3311
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7310122300
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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