Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP02_F_L18
         (581 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL032640-4|CAA21642.1|  369|Caenorhabditis elegans Hypothetical ...    28   4.2  
Z73422-8|CAA97771.3|  240|Caenorhabditis elegans Hypothetical pr...    27   7.4  
AF036692-9|AAB88330.1|  389|Caenorhabditis elegans Hypothetical ...    27   7.4  

>AL032640-4|CAA21642.1|  369|Caenorhabditis elegans Hypothetical
           protein Y43F8A.4 protein.
          Length = 369

 Score = 28.3 bits (60), Expect = 4.2
 Identities = 13/32 (40%), Positives = 15/32 (46%)
 Frame = -1

Query: 269 CFCTSLEVPVYRLALWYIFGRKLLEPGQTLQN 174
           CF        YRLA W IFG K    G ++ N
Sbjct: 331 CFFCFFLSSQYRLAFWSIFGCKCASSGSSVSN 362


>Z73422-8|CAA97771.3|  240|Caenorhabditis elegans Hypothetical
           protein B0564.1a protein.
          Length = 240

 Score = 27.5 bits (58), Expect = 7.4
 Identities = 11/43 (25%), Positives = 23/43 (53%)
 Frame = -2

Query: 475 TEILKRLAILMVFSNTEIIIGQFGDFLHVSELDFVDFTARTSC 347
           T++L R+ +  +    E+I+ +  + LH+  L  V   A+ +C
Sbjct: 174 TDLLPRVTLATICGRDEVILVELQNRLHIDHLSTVMDAAKATC 216


>AF036692-9|AAB88330.1|  389|Caenorhabditis elegans Hypothetical
           protein C44B12.7 protein.
          Length = 389

 Score = 27.5 bits (58), Expect = 7.4
 Identities = 12/22 (54%), Positives = 15/22 (68%)
 Frame = -2

Query: 136 INAALSSLPVLIKCGAFSGDLK 71
           IN+ L S+P  I C AF+ DLK
Sbjct: 72  INSLLLSVPPSISCSAFADDLK 93


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,251,832
Number of Sequences: 27780
Number of extensions: 217044
Number of successful extensions: 441
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 436
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 441
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1215936170
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)