Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP02_F_L13
(654 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
09_03_0117 - 12486672-12486818,12487438-12487488,12487583-124877... 196 2e-50
10_02_0022 - 4290708-4290788,4291254-4291305,4291396-4291484,429... 174 4e-44
06_01_0262 - 1930552-1930632,1931096-1931152,1931236-1931287,193... 152 2e-37
03_02_0477 - 8770905-8770985,8771164-8771361,8771939-8772025,877... 105 2e-23
03_02_0365 - 7816966-7817046,7817441-7817492,7817590-7817678,781... 101 1e-22
07_03_0627 - 20061951-20062391,20062912-20062960,20063386-200638... 29 3.2
01_01_0796 + 6190931-6192745 29 4.3
11_01_0660 + 5382460-5382764,5383854-5384348,5384454-5384541,538... 27 9.9
05_04_0312 - 20123892-20124085,20124183-20124508,20124728-201247... 27 9.9
02_02_0210 + 7873962-7874753 27 9.9
02_02_0209 + 7866348-7867139 27 9.9
>09_03_0117 -
12486672-12486818,12487438-12487488,12487583-12487729,
12488037-12488354,12488450-12488604,12488941-12489248,
12490644-12491038
Length = 506
Score = 196 bits (477), Expect = 2e-50
Identities = 98/163 (60%), Positives = 119/163 (73%), Gaps = 1/163 (0%)
Frame = +2
Query: 167 GNPTVEVDLVTELG-LFRAAVPSGASTGVHEALELRDNIKSEYHGKGVLTAIKNINELIA 343
GNPTVEVDLV G L R+AVPSGASTG++EALELRD + Y GKGVL A++NINE+IA
Sbjct: 64 GNPTVEVDLVAGDGRLHRSAVPSGASTGIYEALELRDGDGAAYGGKGVLNAVRNINEVIA 123
Query: 344 PELTKANLEVTQQREIDELMLKLDGTENKSKLGANAIXXXXXXXXXXXXXXXNVPLYKHL 523
P+L ++V Q ++D +ML +DGT NKSKLGANAI VPLYKH+
Sbjct: 124 PKLV--GVDVRNQSDVDAIMLDIDGTPNKSKLGANAILGVSLSVCRAGAGAKEVPLYKHI 181
Query: 524 ADLAGNNDIVLPVPAFNVINGGSHAGNKLAMXEFMIFPTGAST 652
+LAG ++V+PVPAFNVINGGSHAGN LAM EFM+ P GAS+
Sbjct: 182 QELAGTKELVMPVPAFNVINGGSHAGNNLAMQEFMLLPVGASS 224
>10_02_0022 -
4290708-4290788,4291254-4291305,4291396-4291484,
4291565-4291615,4291699-4291893,4292010-4292090,
4292190-4292252,4292480-4292554,4292630-4292710,
4292784-4292888,4292977-4293057,4293156-4293242,
4293322-4293369,4293923-4293987,4294109-4294172,
4294828-4294896
Length = 428
Score = 174 bits (424), Expect = 4e-44
Identities = 99/170 (58%), Positives = 117/170 (68%), Gaps = 8/170 (4%)
Frame = +2
Query: 167 GNPTVEVDLVTELGLF-RAAVPSGASTGVHEALELRDNIKSEYHGKGVLTAIKNINELIA 343
GNPTVEVD+ G F RAAVPSGASTGV+EALELRD S+Y GKGV A+ N+N +IA
Sbjct: 18 GNPTVEVDVCCSDGTFARAAVPSGASTGVYEALELRDG-GSDYLGKGVSKAVDNVNSVIA 76
Query: 344 PELTKANLEVTQQREIDELMLK-LDGTEN-----KSKLGANAIXXXXXXXXXXXXXXXNV 505
P L + T Q E+D M++ LDGT+N K KLGANAI +
Sbjct: 77 PALI--GKDPTSQAELDNFMVQQLDGTKNEWGWCKQKLGANAILAVSLAICKAGAIIKKI 134
Query: 506 PLYKHLADLAGNNDIVLPVPAFNVINGGSHAGNKLAM-XEFMIFPTGAST 652
PLY+H+A+LAGN +VLPVPAFNVINGGSHAGNKLAM EFMI PTGA++
Sbjct: 135 PLYQHIANLAGNKQLVLPVPAFNVINGGSHAGNKLAMQAEFMILPTGAAS 184
Score = 27.5 bits (58), Expect = 9.9
Identities = 12/16 (75%), Positives = 13/16 (81%)
Frame = +1
Query: 127 IKSIKARQIFDSRWQP 174
I S+KARQIFDSR P
Sbjct: 5 IVSVKARQIFDSRGNP 20
>06_01_0262 -
1930552-1930632,1931096-1931152,1931236-1931287,
1931373-1931461,1931551-1931601,1931696-1931890,
1932015-1932095,1932205-1932267,1933045-1933119,
1933194-1933352,1933353-1933463,1933536-1933616,
1933721-1933807,1933920-1933967,1934357-1934421,
1935002-1935065,1935220-1935288
Length = 475
Score = 152 bits (369), Expect = 2e-37
Identities = 89/160 (55%), Positives = 106/160 (66%), Gaps = 10/160 (6%)
Frame = +2
Query: 167 GNPTVEVDLVTELGLF-RAAVPSGASTGVHEALELRDNIKSEYHGKGVLTAIKNINELIA 343
GNPTVEVD+ G F R AVPSGASTG++EALELRD S+Y GKGVL A+ N+N +I
Sbjct: 18 GNPTVEVDVGLSDGSFARGAVPSGASTGIYEALELRDG-GSDYLGKGVLKAVSNVNTIIG 76
Query: 344 PELTKANLEVTQQREIDELMLK-LDGTEN-----KSKLGANAIXXXXXXXXXXXXXXXNV 505
P L + T+Q +ID M++ LDGT N K KLGANAI +
Sbjct: 77 PALI--GKDPTEQVDIDNFMVQQLDGTSNNWGWCKQKLGANAILAVSLAVCKAGAMVKKI 134
Query: 506 PLYK---HLADLAGNNDIVLPVPAFNVINGGSHAGNKLAM 616
PLY+ H+A+LAGN +VLPVPAFNVINGGSHAGNKLAM
Sbjct: 135 PLYQKLQHIANLAGNKTLVLPVPAFNVINGGSHAGNKLAM 174
Score = 29.5 bits (63), Expect = 2.4
Identities = 12/20 (60%), Positives = 16/20 (80%)
Frame = +1
Query: 115 LKMVIKSIKARQIFDSRWQP 174
+ + I+S+KARQIFDSR P
Sbjct: 1 MAVTIQSVKARQIFDSRGNP 20
>03_02_0477 -
8770905-8770985,8771164-8771361,8771939-8772025,
8772094-8772179,8772270-8772368,8772431-8772551,
8773251-8773331,8773643-8773723,8773972-8774088,
8774185-8774256,8774621-8775055
Length = 485
Score = 105 bits (253), Expect = 2e-23
Identities = 56/160 (35%), Positives = 86/160 (53%)
Frame = +2
Query: 167 GNPTVEVDLVTELGLFRAAVPSGASTGVHEALELRDNIKSEYHGKGVLTAIKNINELIAP 346
G P VEV L T + RA+ + + A +RD K + + V A++ IN+ ++
Sbjct: 60 GEPAVEVSLHTNKAVHRASAAAADAPEGAAADAVRDAEKRKLLARAVADAVRVINDKVSE 119
Query: 347 ELTKANLEVTQQREIDELMLKLDGTENKSKLGANAIXXXXXXXXXXXXXXXNVPLYKHLA 526
L ++ QQ +ID+ ++ LD +K+++G N++ VPLYKH+A
Sbjct: 120 ALV--GMDPQQQSQIDQAIMDLDKAHHKAEIGVNSMLAVSIAACKAGAAEKEVPLYKHIA 177
Query: 527 DLAGNNDIVLPVPAFNVINGGSHAGNKLAMXEFMIFPTGA 646
+L G + LP+PA VINGG+HAGN L + E MI P GA
Sbjct: 178 ELVGKSATTLPIPAITVINGGTHAGNSLPIQEIMILPVGA 217
>03_02_0365 -
7816966-7817046,7817441-7817492,7817590-7817678,
7817762-7817854,7817900-7818094,7818172-7818249,
7818353-7818415,7818806-7818880,7818958-7819038,
7819329-7819409,7819516-7819602,7819682-7819729,
7820317-7820381,7820566-7820629,7821254-7821322
Length = 406
Score = 101 bits (242), Expect(2) = 1e-22
Identities = 63/124 (50%), Positives = 76/124 (61%), Gaps = 7/124 (5%)
Frame = +2
Query: 167 GNPTVEVDLVTELGLF-RAAVPSGASTGVHEALELRDNIKSEYHGKGVLTAIKNINELIA 343
GNPTVEVD+ G F RAAVPSGASTGV+EALELRD S+Y GKGVL A+ N+N +I
Sbjct: 18 GNPTVEVDICCSDGTFARAAVPSGASTGVYEALELRDG-GSDYLGKGVLKAVDNVNSIIG 76
Query: 344 PELTKANLEVTQQREIDELML-KLDGTEN-----KSKLGANAIXXXXXXXXXXXXXXXNV 505
P L + T+Q ID M+ +LDGT+N K KLGANAI +
Sbjct: 77 PAL--IGKDPTEQTVIDNFMVQQLDGTKNEWGWCKQKLGANAILAVSLALCKAGAIIKKI 134
Query: 506 PLYK 517
PLY+
Sbjct: 135 PLYQ 138
Score = 28.7 bits (61), Expect = 4.3
Identities = 12/16 (75%), Positives = 14/16 (87%)
Frame = +1
Query: 127 IKSIKARQIFDSRWQP 174
I+S+KARQIFDSR P
Sbjct: 5 IQSVKARQIFDSRGNP 20
Score = 23.0 bits (47), Expect(2) = 1e-22
Identities = 9/11 (81%), Positives = 10/11 (90%)
Frame = +2
Query: 620 EFMIFPTGAST 652
EFMI PTGAS+
Sbjct: 139 EFMILPTGASS 149
>07_03_0627 - 20061951-20062391,20062912-20062960,20063386-20063851,
20063933-20064139,20064267-20064405,20065146-20065282,
20065414-20065657,20065808-20065969,20066049-20066167,
20066240-20066314,20066327-20066500,20066607-20066769,
20067211-20067420,20067515-20067668,20067761-20067839,
20067999-20068146,20068501-20068671,20068771-20069385
Length = 1250
Score = 29.1 bits (62), Expect = 3.2
Identities = 16/48 (33%), Positives = 26/48 (54%)
Frame = +2
Query: 206 GLFRAAVPSGASTGVHEALELRDNIKSEYHGKGVLTAIKNINELIAPE 349
GL +A + SGA + A+E D+ YHG V +++N +IA +
Sbjct: 1124 GLVKAFMDSGAKAVISSAMEPPDSQSIVYHGMEVNGSLENGKFVIADD 1171
>01_01_0796 + 6190931-6192745
Length = 604
Score = 28.7 bits (61), Expect = 4.3
Identities = 17/75 (22%), Positives = 36/75 (48%)
Frame = +2
Query: 206 GLFRAAVPSGASTGVHEALELRDNIKSEYHGKGVLTAIKNINELIAPELTKANLEVTQQR 385
GLF+ A TG A+ + D +S++H G T ++ ++ ++ +A E
Sbjct: 29 GLFKCASDLSILTGASVAVVIEDQNRSKFHAVGTPTVQAVVDAALSSDVEEAAAEARPVA 88
Query: 386 EIDELMLKLDGTENK 430
+ ++LM ++ E +
Sbjct: 89 D-EQLMERIAPLERE 102
>11_01_0660 +
5382460-5382764,5383854-5384348,5384454-5384541,
5384629-5384691,5384965-5385125,5385214-5385289,
5385395-5385454,5385555-5385662,5385746-5385982,
5386192-5386307,5386756-5386813
Length = 588
Score = 27.5 bits (58), Expect = 9.9
Identities = 13/37 (35%), Positives = 23/37 (62%), Gaps = 2/37 (5%)
Frame = +2
Query: 269 RDNIKSEYHGKGVL--TAIKNINELIAPELTKANLEV 373
RD + + GKG + T+ ++++ L P+LT NL+V
Sbjct: 518 RDTFPTSFDGKGAMVQTSNRSLSPLRDPDLTMRNLQV 554
>05_04_0312 -
20123892-20124085,20124183-20124508,20124728-20124732,
20125063-20125670,20125744-20125884,20126067-20126194,
20126288-20126329,20126613-20126755
Length = 528
Score = 27.5 bits (58), Expect = 9.9
Identities = 12/28 (42%), Positives = 17/28 (60%)
Frame = -1
Query: 648 DAPVGKIMNSCMASLFPACDPPLITLKA 565
DA + ++ N C+ LFPA D L +KA
Sbjct: 375 DAEINEMANDCLKKLFPAAD-DLTAIKA 401
>02_02_0210 + 7873962-7874753
Length = 263
Score = 27.5 bits (58), Expect = 9.9
Identities = 12/30 (40%), Positives = 14/30 (46%)
Frame = +1
Query: 163 RWQPYSGS*SGNRAWLVPGSCTLWCLHWCS 252
RWQP + + AW P C W WCS
Sbjct: 31 RWQPAAAARRKGTAWNTPLRC--WRRWWCS 58
>02_02_0209 + 7866348-7867139
Length = 263
Score = 27.5 bits (58), Expect = 9.9
Identities = 12/30 (40%), Positives = 14/30 (46%)
Frame = +1
Query: 163 RWQPYSGS*SGNRAWLVPGSCTLWCLHWCS 252
RWQP + + AW P C W WCS
Sbjct: 31 RWQPAAAARRKGTAWNTPLRC--WRRWWCS 58
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,152,787
Number of Sequences: 37544
Number of extensions: 280747
Number of successful extensions: 682
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 648
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 668
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1632177336
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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