Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP02_F_L10
(621 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P62241 Cluster: 40S ribosomal protein S8; n=93; Eukaryo... 258 6e-68
UniRef50_Q8MLY8 Cluster: 40S ribosomal protein S8; n=82; Eukaryo... 235 5e-61
UniRef50_Q5JR95 Cluster: Ribosomal protein S8; n=8; Euteleostomi... 211 1e-53
UniRef50_Q08069 Cluster: 40S ribosomal protein S8; n=21; Eukaryo... 199 5e-50
UniRef50_Q3UA25 Cluster: Bone marrow macrophage cDNA, RIKEN full... 188 1e-46
UniRef50_Q4N3P0 Cluster: 40S ribosomal protein S8; n=4; Eukaryot... 171 1e-41
UniRef50_P25204 Cluster: 40S ribosomal protein S8; n=19; Eukaryo... 165 6e-40
UniRef50_Q6QP50 Cluster: Putative 40S ribosomal protein S8; n=1;... 128 1e-28
UniRef50_UPI000049933B Cluster: conserved hypothetical protein; ... 120 3e-26
UniRef50_Q5C1R4 Cluster: SJCHGC03085 protein; n=1; Schistosoma j... 101 1e-20
UniRef50_Q9AW20 Cluster: 40S ribosomal protein S8; n=1; Guillard... 84 3e-15
UniRef50_Q7R1W8 Cluster: Ribosomal protein S8; n=1; Giardia lamb... 83 5e-15
UniRef50_Q4SV68 Cluster: Chromosome undetermined SCAF13783, whol... 77 3e-13
UniRef50_Q8SWC9 Cluster: Ribosomal protein S8; n=1; Encephalitoz... 76 8e-13
UniRef50_A6RAQ0 Cluster: Ribosomal protein S8; n=1; Ajellomyces ... 63 6e-09
UniRef50_Q3LVX9 Cluster: Ribosomal protein S8; n=1; Bigelowiella... 58 1e-07
UniRef50_A7Q5T2 Cluster: Chromosome chr14 scaffold_54, whole gen... 56 5e-07
UniRef50_A3CSQ2 Cluster: 30S ribosomal protein S8e; n=5; Archaea... 43 0.007
UniRef50_Q9VL72 Cluster: CG5899-PA, isoform A; n=5; Diptera|Rep:... 38 0.26
UniRef50_Q3SAD8 Cluster: Putative uncharacterized protein; n=1; ... 35 1.4
UniRef50_Q8TV55 Cluster: 30S ribosomal protein S8e; n=1; Methano... 35 1.4
UniRef50_A6SGH0 Cluster: Putative uncharacterized protein; n=1; ... 34 2.4
UniRef50_Q6L0D3 Cluster: 30S ribosomal protein S8e; n=7; Archaea... 34 3.1
UniRef50_UPI0000F2B19F Cluster: PREDICTED: hypothetical protein;... 33 7.3
UniRef50_Q89D60 Cluster: Blr7583 protein; n=1; Bradyrhizobium ja... 33 7.3
UniRef50_A5E7M6 Cluster: Putative uncharacterized protein; n=1; ... 33 7.3
UniRef50_UPI0000F32D0C Cluster: Zinc finger CCCH domain-containi... 32 9.6
UniRef50_A0L8H8 Cluster: DNA repair protein RecN; n=2; cellular ... 32 9.6
UniRef50_Q962J8 Cluster: PV1H14180_P; n=2; Plasmodium vivax|Rep:... 32 9.6
UniRef50_A7F1W3 Cluster: Putative uncharacterized protein; n=1; ... 32 9.6
UniRef50_O58830 Cluster: 30S ribosomal protein S8e; n=6; Archaea... 32 9.6
>UniRef50_P62241 Cluster: 40S ribosomal protein S8; n=93;
Eukaryota|Rep: 40S ribosomal protein S8 - Homo sapiens
(Human)
Length = 208
Score = 258 bits (633), Expect = 6e-68
Identities = 125/185 (67%), Positives = 142/185 (76%), Gaps = 1/185 (0%)
Frame = +3
Query: 69 GNVRPYARRGSMS*GVPL-QTPGSVLSVSTPXRSRGGNTKYRALRLDTGNFSWGSECSTR 245
G +PY ++ G P T + T R RGGN KYRALRLD GNFSWGSEC TR
Sbjct: 16 GKRKPYHKKRKYELGRPAANTKIGPRRIHT-VRVRGGNKKYRALRLDVGNFSWGSECCTR 74
Query: 246 KTRIIDVVYNASNNELVRTKTLVKNAIVVVDATPFRQWYESHYTLPLGRKKGAKLTEAEE 425
KTRIIDVVYNASNNELVRTKTLVKN IV++D+TP+RQWYESHY LPLGRKKGAKLT EE
Sbjct: 75 KTRIIDVVYNASNNELVRTKTLVKNCIVLIDSTPYRQWYESHYALPLGRKKGAKLTPEEE 134
Query: 426 AIINKKRSQKTARKYLARQRLAKVEGALXEQFHTGRLLACVASRPXQCGRADGYILXGKE 605
I+NKKRS+K +KY R++ AK+ L EQF G+LLAC+ASRP QCGRADGY+L GKE
Sbjct: 135 EILNKKRSKKIQKKYDERKKNAKISSLLEEQFQQGKLLACIASRPGQCGRADGYVLEGKE 194
Query: 606 LEFYL 620
LEFYL
Sbjct: 195 LEFYL 199
Score = 34.3 bits (75), Expect = 2.4
Identities = 13/15 (86%), Positives = 14/15 (93%)
Frame = +1
Query: 22 MGISRDHWHKRRATG 66
MGISRD+WHKRR TG
Sbjct: 1 MGISRDNWHKRRKTG 15
>UniRef50_Q8MLY8 Cluster: 40S ribosomal protein S8; n=82;
Eukaryota|Rep: 40S ribosomal protein S8 - Drosophila
melanogaster (Fruit fly)
Length = 208
Score = 235 bits (576), Expect = 5e-61
Identities = 109/155 (70%), Positives = 129/155 (83%), Gaps = 2/155 (1%)
Frame = +3
Query: 162 RSRGGNTKYRALRLDTGNFSWGSECSTRKTRIIDVVYNASNNELVRTKTLVKNAIVVVDA 341
R+RGGNTK RALRL+TGNF+W SE RKTRI DVVYNASNNELVRTKTLVKN+IVV+DA
Sbjct: 47 RTRGGNTKLRALRLETGNFAWASEGVARKTRIADVVYNASNNELVRTKTLVKNSIVVIDA 106
Query: 342 TPFRQWYESHYTLPLGRKKGAKLTEAEEA--IINKKRSQKTARKYLARQRLAKVEGALXE 515
TPFRQWYE+HY LPLGRK+ K + E+ ++ KKRS+K +KYL RQ+ KVE AL +
Sbjct: 107 TPFRQWYEAHYVLPLGRKRNPKHAQKEDENDVLTKKRSEKVMKKYLERQKYGKVEQALED 166
Query: 516 QFHTGRLLACVASRPXQCGRADGYILXGKELEFYL 620
QF +GR+LAC++SRP QCGR+DGYIL GKELEFYL
Sbjct: 167 QFTSGRILACISSRPGQCGRSDGYILEGKELEFYL 201
Score = 50.4 bits (115), Expect = 3e-05
Identities = 21/29 (72%), Positives = 25/29 (86%)
Frame = +2
Query: 68 GKRAPIRKKRKYELGRPAANTRLGPQRIH 154
GKR +RKKRK+ELGRPAANT+LG R+H
Sbjct: 16 GKRKSLRKKRKFELGRPAANTKLGSGRVH 44
>UniRef50_Q5JR95 Cluster: Ribosomal protein S8; n=8;
Euteleostomi|Rep: Ribosomal protein S8 - Homo sapiens
(Human)
Length = 188
Score = 211 bits (515), Expect = 1e-53
Identities = 103/148 (69%), Positives = 117/148 (79%)
Frame = +3
Query: 177 NTKYRALRLDTGNFSWGSECSTRKTRIIDVVYNASNNELVRTKTLVKNAIVVVDATPFRQ 356
NTK R+ T G C TRKTRIIDVVYNASNNELVRTKTLVKN IV++D+TP+RQ
Sbjct: 35 NTKIGPRRIHTVRVRGG--C-TRKTRIIDVVYNASNNELVRTKTLVKNCIVLIDSTPYRQ 91
Query: 357 WYESHYTLPLGRKKGAKLTEAEEAIINKKRSQKTARKYLARQRLAKVEGALXEQFHTGRL 536
WYESHY LPLGRKKGAKLT EE I+NKKRS+K +KY R++ AK+ L EQF G+L
Sbjct: 92 WYESHYALPLGRKKGAKLTPEEEEILNKKRSKKIQKKYDERKKNAKISSLLEEQFQQGKL 151
Query: 537 LACVASRPXQCGRADGYILXGKELEFYL 620
LAC+ASRP QCGRADGY+L GKELEFYL
Sbjct: 152 LACIASRPGQCGRADGYVLEGKELEFYL 179
Score = 56.4 bits (130), Expect = 5e-07
Identities = 23/30 (76%), Positives = 27/30 (90%)
Frame = +2
Query: 68 GKRAPIRKKRKYELGRPAANTRLGPQRIHS 157
GKR P KKRKYELGRPAANT++GP+RIH+
Sbjct: 16 GKRKPYHKKRKYELGRPAANTKIGPRRIHT 45
Score = 34.3 bits (75), Expect = 2.4
Identities = 13/15 (86%), Positives = 14/15 (93%)
Frame = +1
Query: 22 MGISRDHWHKRRATG 66
MGISRD+WHKRR TG
Sbjct: 1 MGISRDNWHKRRKTG 15
>UniRef50_Q08069 Cluster: 40S ribosomal protein S8; n=21;
Eukaryota|Rep: 40S ribosomal protein S8 - Zea mays
(Maize)
Length = 221
Score = 199 bits (485), Expect = 5e-50
Identities = 99/161 (61%), Positives = 118/161 (73%), Gaps = 8/161 (4%)
Frame = +3
Query: 162 RSRGGNTKYRALRLDTGNFSWGSECSTRKTRIIDVVYNASNNELVRTKTLVKNAIVVVDA 341
R RGGN K+RALRLDTGN+SWGSE TRKTRI+DVVYNASNNELVRT+TLVK+AIV VDA
Sbjct: 48 RVRGGNVKWRALRLDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDA 107
Query: 342 TPFRQWYESHYTLPLGRKK--------GAKLTEAEEAIINKKRSQKTARKYLARQRLAKV 497
PF+QWY +HY + +GRKK A+ E E A K+S RK R+ +
Sbjct: 108 APFKQWYLTHYGVDIGRKKKTPAAKKDNAEGQEVEAAAEETKKSNHVTRKLEKRKEGRTL 167
Query: 498 EGALXEQFHTGRLLACVASRPXQCGRADGYILXGKELEFYL 620
+ + EQF +GRLLAC++SRP QCGRADGYIL GKELEFY+
Sbjct: 168 DPHIEEQFGSGRLLACISSRPGQCGRADGYILEGKELEFYM 208
Score = 35.9 bits (79), Expect = 0.78
Identities = 16/27 (59%), Positives = 19/27 (70%)
Frame = +2
Query: 68 GKRAPIRKKRKYELGRPAANTRLGPQR 148
GK+ RKKRKYELGR ANT+L +
Sbjct: 16 GKQKAWRKKRKYELGRQPANTKLSSNK 42
>UniRef50_Q3UA25 Cluster: Bone marrow macrophage cDNA, RIKEN
full-length enriched library, clone:I830031J02
product:ribosomal protein S8, full insert sequence; n=9;
Deuterostomia|Rep: Bone marrow macrophage cDNA, RIKEN
full-length enriched library, clone:I830031J02
product:ribosomal protein S8, full insert sequence - Mus
musculus (Mouse)
Length = 152
Score = 188 bits (457), Expect = 1e-46
Identities = 92/135 (68%), Positives = 103/135 (76%), Gaps = 1/135 (0%)
Frame = +3
Query: 69 GNVRPYARRGSMS*GVPL-QTPGSVLSVSTPXRSRGGNTKYRALRLDTGNFSWGSECSTR 245
G +PY ++ G P T + T R RGGN KYRALRLD GNFSWGSEC TR
Sbjct: 16 GKRKPYHKKRKYELGRPAANTKIGPRRIHT-VRVRGGNKKYRALRLDVGNFSWGSECCTR 74
Query: 246 KTRIIDVVYNASNNELVRTKTLVKNAIVVVDATPFRQWYESHYTLPLGRKKGAKLTEAEE 425
KTRIIDVVYNASNNELVRTKTLVKN IV++D+TP+RQWYESHY LPLGRKKGAKLT EE
Sbjct: 75 KTRIIDVVYNASNNELVRTKTLVKNCIVLIDSTPYRQWYESHYALPLGRKKGAKLTPEEE 134
Query: 426 AIINKKRSQKTARKY 470
I+NKKRS+K +KY
Sbjct: 135 EILNKKRSKKIQKKY 149
Score = 34.3 bits (75), Expect = 2.4
Identities = 13/15 (86%), Positives = 14/15 (93%)
Frame = +1
Query: 22 MGISRDHWHKRRATG 66
MGISRD+WHKRR TG
Sbjct: 1 MGISRDNWHKRRKTG 15
>UniRef50_Q4N3P0 Cluster: 40S ribosomal protein S8; n=4;
Eukaryota|Rep: 40S ribosomal protein S8 - Theileria
parva
Length = 188
Score = 171 bits (416), Expect = 1e-41
Identities = 90/152 (59%), Positives = 109/152 (71%)
Frame = +3
Query: 162 RSRGGNTKYRALRLDTGNFSWGSECSTRKTRIIDVVYNASNNELVRTKTLVKNAIVVVDA 341
R RGGN K+RALRLD+GNFSWGS+ TRKTR++DVVYNAS+NELVRTKTLVKNAIV VD
Sbjct: 47 RCRGGNLKFRALRLDSGNFSWGSQNVTRKTRVMDVVYNASSNELVRTKTLVKNAIVTVDP 106
Query: 342 TPFRQWYESHYTLPLGRKKGAKLTEAEEAIINKKRSQKTARKYLARQRLAKVEGALXEQF 521
TPF+ W+++HY L LG K +E +A S+K A A V L +QF
Sbjct: 107 TPFKLWFKTHYGLELG-----KSSEDPQA------SEKVA---------ALVPRTLLDQF 146
Query: 522 HTGRLLACVASRPXQCGRADGYILXGKELEFY 617
+GRLLAC++SRP QCGR DGY+L G+EL FY
Sbjct: 147 SSGRLLACISSRPGQCGRCDGYVLEGEELNFY 178
Score = 39.5 bits (88), Expect = 0.063
Identities = 17/29 (58%), Positives = 24/29 (82%), Gaps = 1/29 (3%)
Frame = +2
Query: 68 GKRAPI-RKKRKYELGRPAANTRLGPQRI 151
G R P+ +KKRKYELGRP++NT+LG + +
Sbjct: 15 GGRYPVHKKKRKYELGRPSSNTKLGSKLV 43
>UniRef50_P25204 Cluster: 40S ribosomal protein S8; n=19;
Eukaryota|Rep: 40S ribosomal protein S8 - Leishmania
major
Length = 220
Score = 165 bits (402), Expect = 6e-40
Identities = 88/169 (52%), Positives = 110/169 (65%), Gaps = 13/169 (7%)
Frame = +3
Query: 153 TPXRSRGGNTKYRALRLDTGNFSWGSECSTRKTRIIDVVYNASNNELVRTKTLVKNAIVV 332
+P R+RGGN K RALRLDTGNF+W SE + R++DVVYNA++NELVRTKTLVKN IV
Sbjct: 44 SPVRARGGNFKIRALRLDTGNFAWASEAIAHRVRLLDVVYNATSNELVRTKTLVKNCIVA 103
Query: 333 VDATPFRQWYESHYTLPL-GRKKGAKLTEAEE--------AIINK----KRSQKTARKYL 473
VDA PF++WY HY + L KK K A E A +K K S K R++
Sbjct: 104 VDAAPFKRWYAKHYGIDLDADKKSTKAAVAAEKKGRKSAHAAADKYDVNKASPKLQREWT 163
Query: 474 ARQRLAKVEGALXEQFHTGRLLACVASRPXQCGRADGYILXGKELEFYL 620
R+R +VE A+ +Q GR+LA + SRP Q GRADG +L G EL+FYL
Sbjct: 164 RRRRNHRVEKAIADQLREGRVLARITSRPGQSGRADGILLEGAELQFYL 212
Score = 32.7 bits (71), Expect = 7.3
Identities = 16/28 (57%), Positives = 19/28 (67%)
Frame = +2
Query: 68 GKRAPIRKKRKYELGRPAANTRLGPQRI 151
GK RK+ K ELGR ANTRLG +R+
Sbjct: 16 GKTKIHRKRMKAELGRLPANTRLGARRV 43
>UniRef50_Q6QP50 Cluster: Putative 40S ribosomal protein S8; n=1;
Zea mays|Rep: Putative 40S ribosomal protein S8 - Zea
mays (Maize)
Length = 245
Score = 128 bits (309), Expect = 1e-28
Identities = 58/88 (65%), Positives = 72/88 (81%)
Frame = +3
Query: 162 RSRGGNTKYRALRLDTGNFSWGSECSTRKTRIIDVVYNASNNELVRTKTLVKNAIVVVDA 341
R RGGNTK+RALR DT N+SWGSE TRKTRI+DVVY A+NNELVRT+TLVK+AIV VDA
Sbjct: 145 RVRGGNTKWRALRFDTCNYSWGSEALTRKTRILDVVYIATNNELVRTQTLVKSAIVQVDA 204
Query: 342 TPFRQWYESHYTLPLGRKKGAKLTEAEE 425
PF+QWY +HY + +GRKK + + ++
Sbjct: 205 APFKQWYLTHYGVDIGRKKKVSVAKKDD 232
>UniRef50_UPI000049933B Cluster: conserved hypothetical protein;
n=3; Entamoeba histolytica HM-1:IMSS|Rep: conserved
hypothetical protein - Entamoeba histolytica HM-1:IMSS
Length = 237
Score = 120 bits (289), Expect = 3e-26
Identities = 74/182 (40%), Positives = 104/182 (57%), Gaps = 30/182 (16%)
Frame = +3
Query: 162 RSRGGNTKYRALRLDTGNFSWGSECSTRKTRIIDVVYNASNNELVRTKTLVKNAIVVVDA 341
R R G K RALRL+ GNFSW S+ T+ T+I++VVYNAS+N+ VRT TLVK AI+ +D
Sbjct: 47 RCRYGIIKRRALRLENGNFSWASQSITKGTKILNVVYNASDNDFVRTNTLVKGAIIEIDP 106
Query: 342 TPFRQWYESHYTLPLGRKKGAKLTEA-----EEAII------NKKRS------------- 449
PFR W+ Y + K E+ E+ ++ NK+++
Sbjct: 107 APFRLWFLKFYGKDIASTDYYKSLESATFKTEKKVVVPKEEENKEKTIAQQIAETQVALM 166
Query: 450 --QKTARKYLARQ----RLAKVEGALXEQFHTGRLLACVASRPXQCGRADGYILXGKELE 611
KT +K A++ + K + AL E F +GR+LAC++SRP Q G +GYIL GKEL+
Sbjct: 167 NPSKTMQKKYAKKLEVLKNMKFDEALLEGFQSGRVLACISSRPGQTGSVEGYILEGKELD 226
Query: 612 FY 617
FY
Sbjct: 227 FY 228
Score = 35.9 bits (79), Expect = 0.78
Identities = 15/29 (51%), Positives = 21/29 (72%)
Frame = +2
Query: 68 GKRAPIRKKRKYELGRPAANTRLGPQRIH 154
GK+ ++KK+K +GR ANTRLG R+H
Sbjct: 16 GKKNSMQKKKKNTMGRQPANTRLGAIRVH 44
>UniRef50_Q5C1R4 Cluster: SJCHGC03085 protein; n=1; Schistosoma
japonicum|Rep: SJCHGC03085 protein - Schistosoma
japonicum (Blood fluke)
Length = 120
Score = 101 bits (242), Expect = 1e-20
Identities = 55/110 (50%), Positives = 71/110 (64%), Gaps = 9/110 (8%)
Frame = +3
Query: 315 KNAIVVVDATPFRQWYESHYTLPLGR-----KKGAKLT--EAEEAIINKKRSQKTARKYL 473
K+AIV + PFRQW+E+ Y LG KKG +T EE + KKRS+ +K+
Sbjct: 1 KSAIVQIGGAPFRQWFEAPYLKELGPPKVVCKKGPSVTPENPEEDFLLKKRSKSALKKFE 60
Query: 474 ARQRL--AKVEGALXEQFHTGRLLACVASRPXQCGRADGYILXGKELEFY 617
RQ L A VE +L E+F TGRLLAC++S+P Q GRADGY+ GKELEF+
Sbjct: 61 TRQALPQANVEESLKEEFVTGRLLACISSKPGQVGRADGYLFEGKELEFF 110
>UniRef50_Q9AW20 Cluster: 40S ribosomal protein S8; n=1; Guillardia
theta|Rep: 40S ribosomal protein S8 - Guillardia theta
(Cryptomonas phi)
Length = 178
Score = 83.8 bits (198), Expect = 3e-15
Identities = 61/153 (39%), Positives = 80/153 (52%)
Frame = +3
Query: 162 RSRGGNTKYRALRLDTGNFSWGSECSTRKTRIIDVVYNASNNELVRTKTLVKNAIVVVDA 341
R RGG K RAL L GNFS+ S T K +I+ V +N S+NELVRT TL K +IV +D
Sbjct: 47 RVRGGGVKTRALFLSYGNFSFVSIQRTFKAKILSVAFNESSNELVRTNTLTKGSIVYLDI 106
Query: 342 TPFRQWYESHYTLPLGRKKGAKLTEAEEAIINKKRSQKTARKYLARQRLAKVEGALXEQF 521
+ TL K+ AE+ I NK L +Q
Sbjct: 107 AKTL----IYNTLIRNLNSNPKI--AEDTISNK---------------------ILIDQI 139
Query: 522 HTGRLLACVASRPXQCGRADGYILXGKELEFYL 620
+G++LA + SRP Q GRADGYIL G+EL+++L
Sbjct: 140 LSGKILARICSRPGQSGRADGYILEGQELDYFL 172
>UniRef50_Q7R1W8 Cluster: Ribosomal protein S8; n=1; Giardia lamblia
ATCC 50803|Rep: Ribosomal protein S8 - Giardia lamblia
ATCC 50803
Length = 174
Score = 83.0 bits (196), Expect = 5e-15
Identities = 37/64 (57%), Positives = 48/64 (75%)
Frame = +3
Query: 162 RSRGGNTKYRALRLDTGNFSWGSECSTRKTRIIDVVYNASNNELVRTKTLVKNAIVVVDA 341
R RGGN K RALRL G+F+WGS + K RI+ VVYN+++NELVRT TLVK +V +D+
Sbjct: 56 RCRGGNIKRRALRLSHGSFAWGSADISHKARILQVVYNSTSNELVRTNTLVKGCVVQIDS 115
Query: 342 TPFR 353
PF+
Sbjct: 116 APFK 119
Score = 41.9 bits (94), Expect = 0.012
Identities = 19/37 (51%), Positives = 24/37 (64%)
Frame = +3
Query: 507 LXEQFHTGRLLACVASRPXQCGRADGYILXGKELEFY 617
+ +Q +LA ++SRP Q G ADGYIL G EL FY
Sbjct: 131 ILDQIRGDHILARISSRPGQVGTADGYILEGPELLFY 167
>UniRef50_Q4SV68 Cluster: Chromosome undetermined SCAF13783, whole
genome shotgun sequence; n=2; Coelomata|Rep: Chromosome
undetermined SCAF13783, whole genome shotgun sequence -
Tetraodon nigroviridis (Green puffer)
Length = 149
Score = 77.4 bits (182), Expect = 3e-13
Identities = 39/77 (50%), Positives = 46/77 (59%)
Frame = +3
Query: 390 RKKGAKLTEAEEAIINKKRSQKTARKYLARQRLAKVEGALXEQFHTGRLLACVASRPXQC 569
R+ + T EE ++NKKRS+KT +KY R AC+ASRP QC
Sbjct: 64 RRAPSWYTPEEEEVLNKKRSKKTQKKYDERXXXXXXXXXXXXXXXXXXXXACIASRPGQC 123
Query: 570 GRADGYILXGKELEFYL 620
GRADGYIL GKELEFYL
Sbjct: 124 GRADGYILEGKELEFYL 140
>UniRef50_Q8SWC9 Cluster: Ribosomal protein S8; n=1; Encephalitozoon
cuniculi|Rep: Ribosomal protein S8 - Encephalitozoon
cuniculi
Length = 173
Score = 75.8 bits (178), Expect = 8e-13
Identities = 34/67 (50%), Positives = 48/67 (71%)
Frame = +3
Query: 153 TPXRSRGGNTKYRALRLDTGNFSWGSECSTRKTRIIDVVYNASNNELVRTKTLVKNAIVV 332
TP R RGGN KY+ALRLD G+F + + R +++ VVY+ S+NELVRT TL K+++V
Sbjct: 44 TPVRVRGGNRKYKALRLDMGHFKFITTGKFRMAKLLQVVYHPSSNELVRTNTLTKSSVVK 103
Query: 333 VDATPFR 353
+ A PF+
Sbjct: 104 ISAEPFK 110
Score = 45.6 bits (103), Expect = 0.001
Identities = 20/41 (48%), Positives = 26/41 (63%)
Frame = +3
Query: 495 VEGALXEQFHTGRLLACVASRPXQCGRADGYILXGKELEFY 617
V+ +L E F G L A + SRP Q G A G++L G EL+FY
Sbjct: 120 VDPSLHESFEKGHLYAIITSRPGQVGMAQGHVLQGDELKFY 160
>UniRef50_A6RAQ0 Cluster: Ribosomal protein S8; n=1; Ajellomyces
capsulatus NAm1|Rep: Ribosomal protein S8 - Ajellomyces
capsulatus NAm1
Length = 141
Score = 62.9 bits (146), Expect = 6e-09
Identities = 36/77 (46%), Positives = 42/77 (54%), Gaps = 1/77 (1%)
Frame = +3
Query: 390 RKKGAKLTEAEEAIINKKRSQKTARKYLAR-QRLAKVEGALXEQFHTGRLLACVASRPXQ 566
R + + E I K R +K AR KVE AL +QF GRL A V+SRP Q
Sbjct: 59 RLESGNFSWGSEGIARKVRVIVVEKKQAARFAAQGKVEPALEKQFEAGRLYAVVSSRPGQ 118
Query: 567 CGRADGYILXGKELEFY 617
GR DGYIL G+EL FY
Sbjct: 119 SGRVDGYILEGEELAFY 135
Score = 53.6 bits (123), Expect = 4e-06
Identities = 23/35 (65%), Positives = 28/35 (80%)
Frame = +3
Query: 162 RSRGGNTKYRALRLDTGNFSWGSECSTRKTRIIDV 266
R+RGGN K+R LRL++GNFSWGSE RK R+I V
Sbjct: 47 RTRGGNQKFRGLRLESGNFSWGSEGIARKVRVIVV 81
Score = 42.3 bits (95), Expect = 0.009
Identities = 18/28 (64%), Positives = 22/28 (78%)
Frame = +2
Query: 71 KRAPIRKKRKYELGRPAANTRLGPQRIH 154
KR+ RKKR +E GR ANTR+GP+RIH
Sbjct: 17 KRSHYRKKRAFEKGRQPANTRIGPKRIH 44
>UniRef50_Q3LVX9 Cluster: Ribosomal protein S8; n=1; Bigelowiella
natans|Rep: Ribosomal protein S8 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 176
Score = 58.4 bits (135), Expect = 1e-07
Identities = 24/63 (38%), Positives = 42/63 (66%)
Frame = +3
Query: 162 RSRGGNTKYRALRLDTGNFSWGSECSTRKTRIIDVVYNASNNELVRTKTLVKNAIVVVDA 341
R RGGN K++A+ L G+F W + ++ ++I+ V+YN +N +LV+ + L K I+ +D+
Sbjct: 41 RVRGGNFKFKAISLGKGSFQWKTMQLSKNSKILSVLYNQANLKLVQKRNLSKGTIIKIDS 100
Query: 342 TPF 350
PF
Sbjct: 101 MPF 103
>UniRef50_A7Q5T2 Cluster: Chromosome chr14 scaffold_54, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr14 scaffold_54, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 110
Score = 56.4 bits (130), Expect = 5e-07
Identities = 37/91 (40%), Positives = 52/91 (57%)
Frame = +3
Query: 288 ELVRTKTLVKNAIVVVDATPFRQWYESHYTLPLGRKKGAKLTEAEEAIINKKRSQKTARK 467
ELVRT+TLVKNAI+ Q Y HY L +G KK A T ++ +++ RK
Sbjct: 31 ELVRTQTLVKNAII--------QRYLQHYGLDIGCKKKASTTPRKK----ERKGNHVVRK 78
Query: 468 YLARQRLAKVEGALXEQFHTGRLLACVASRP 560
RQ+ K++ + EQF +GRLLA ++S P
Sbjct: 79 LEKRQQDHKLDPHIEEQFGSGRLLAAISSYP 109
>UniRef50_A3CSQ2 Cluster: 30S ribosomal protein S8e; n=5;
Archaea|Rep: 30S ribosomal protein S8e - Methanoculleus
marisnigri (strain ATCC 35101 / DSM 1498 / JR1)
Length = 125
Score = 42.7 bits (96), Expect = 0.007
Identities = 24/56 (42%), Positives = 33/56 (58%)
Frame = +3
Query: 162 RSRGGNTKYRALRLDTGNFSWGSECSTRKTRIIDVVYNASNNELVRTKTLVKNAIV 329
R+ GGN K RALRL+ S + T+KT+I V N+++ VR K L K AI+
Sbjct: 45 RTFGGNQKVRALRLEYATVSNPATGETKKTKIEAVEANSADPNYVRRKLLTKGAII 100
>UniRef50_Q9VL72 Cluster: CG5899-PA, isoform A; n=5; Diptera|Rep:
CG5899-PA, isoform A - Drosophila melanogaster (Fruit
fly)
Length = 844
Score = 37.5 bits (83), Expect = 0.26
Identities = 27/79 (34%), Positives = 39/79 (49%), Gaps = 5/79 (6%)
Frame = +3
Query: 228 SECSTRKT----RIIDVVYNASNNELVRTKTLV-KNAIVVVDATPFRQWYESHYTLPLGR 392
SE ST+ T ++ + AS EL KTL K A+ ++D PF W + L R
Sbjct: 174 SEMSTKMTGQRKKVFQFMNEASLIELQSVKTLSEKKALAIIDVRPFSDWSDLRQKLESIR 233
Query: 393 KKGAKLTEAEEAIINKKRS 449
G L A+E +INK+ +
Sbjct: 234 MSGDLLNYAQE-LINKQNT 251
>UniRef50_Q3SAD8 Cluster: Putative uncharacterized protein; n=1;
uncultured euryarchaeote Alv-FOS1|Rep: Putative
uncharacterized protein - uncultured euryarchaeote
Alv-FOS1
Length = 484
Score = 35.1 bits (77), Expect = 1.4
Identities = 18/65 (27%), Positives = 29/65 (44%)
Frame = +3
Query: 132 GSVLSVSTPXRSRGGNTKYRALRLDTGNFSWGSECSTRKTRIIDVVYNASNNELVRTKTL 311
GS L V+ ++ G + + L N +W + R + + V N + N R T+
Sbjct: 221 GSKLLVNATVKNMGTSPGWANLTFSIDNHTWSNNIYVRSEKTVHVALNVTRNGTFRLTTV 280
Query: 312 VKNAI 326
VKN I
Sbjct: 281 VKNDI 285
>UniRef50_Q8TV55 Cluster: 30S ribosomal protein S8e; n=1;
Methanopyrus kandleri|Rep: 30S ribosomal protein S8e -
Methanopyrus kandleri
Length = 133
Score = 35.1 bits (77), Expect = 1.4
Identities = 14/30 (46%), Positives = 19/30 (63%)
Frame = +2
Query: 59 PPAGKRAPIRKKRKYELGRPAANTRLGPQR 148
P G+ P RKKRK+E+G P T +G +R
Sbjct: 12 PTGGRIRPHRKKRKFEMGNPPTETLVGEER 41
>UniRef50_A6SGH0 Cluster: Putative uncharacterized protein; n=1;
Botryotinia fuckeliana B05.10|Rep: Putative
uncharacterized protein - Botryotinia fuckeliana B05.10
Length = 316
Score = 34.3 bits (75), Expect = 2.4
Identities = 16/51 (31%), Positives = 28/51 (54%), Gaps = 1/51 (1%)
Frame = +2
Query: 32 VGITGISEGPPAGKRAPIRKKRKYELGRPAANTRLGPQRIHSXSF-TWWKY 181
+G+TG G PA ++ ++K++ + P T L P+ +S SF T W +
Sbjct: 10 MGLTGSLAGTPAPEKKQVKKRKSWGQQLPEPKTNLPPRYFNSSSFITQWHW 60
>UniRef50_Q6L0D3 Cluster: 30S ribosomal protein S8e; n=7;
Archaea|Rep: 30S ribosomal protein S8e - Picrophilus
torridus
Length = 125
Score = 33.9 bits (74), Expect = 3.1
Identities = 15/31 (48%), Positives = 18/31 (58%)
Frame = +2
Query: 59 PPAGKRAPIRKKRKYELGRPAANTRLGPQRI 151
P GK P KR+YELGR TRLG + +
Sbjct: 12 PSGGKLRPNHSKRRYELGREPTLTRLGDREL 42
Score = 33.9 bits (74), Expect = 3.1
Identities = 17/56 (30%), Positives = 30/56 (53%)
Frame = +3
Query: 162 RSRGGNTKYRALRLDTGNFSWGSECSTRKTRIIDVVYNASNNELVRTKTLVKNAIV 329
RS GGN+K+ LR D N + +TRK +I V N+++ V+ + + ++
Sbjct: 46 RSYGGNSKFALLRCDYANVYNPKDKTTRKVKINTVKENSADPHYVQRNIMNRGTVI 101
>UniRef50_UPI0000F2B19F Cluster: PREDICTED: hypothetical protein;
n=1; Monodelphis domestica|Rep: PREDICTED: hypothetical
protein - Monodelphis domestica
Length = 161
Score = 32.7 bits (71), Expect = 7.3
Identities = 16/37 (43%), Positives = 22/37 (59%)
Frame = +3
Query: 411 TEAEEAIINKKRSQKTARKYLARQRLAKVEGALXEQF 521
T EE I+NKK S+K +KY ++ AK+ L E F
Sbjct: 105 TPEEEEILNKKHSKKIQKKYEEWKKKAKISLLLREHF 141
>UniRef50_Q89D60 Cluster: Blr7583 protein; n=1; Bradyrhizobium
japonicum|Rep: Blr7583 protein - Bradyrhizobium
japonicum
Length = 261
Score = 32.7 bits (71), Expect = 7.3
Identities = 11/25 (44%), Positives = 16/25 (64%)
Frame = +3
Query: 324 IVVVDATPFRQWYESHYTLPLGRKK 398
++ +D PFR+W + TLPLG K
Sbjct: 22 VIAIDGDPFREWQRTSRTLPLGEVK 46
>UniRef50_A5E7M6 Cluster: Putative uncharacterized protein; n=1;
Lodderomyces elongisporus NRRL YB-4239|Rep: Putative
uncharacterized protein - Lodderomyces elongisporus
(Yeast) (Saccharomyces elongisporus)
Length = 620
Score = 32.7 bits (71), Expect = 7.3
Identities = 15/28 (53%), Positives = 18/28 (64%)
Frame = +3
Query: 339 ATPFRQWYESHYTLPLGRKKGAKLTEAE 422
ATPF Q + +HY L RKKG K+ E E
Sbjct: 374 ATPFYQTFLAHYIWQLKRKKGKKMKEDE 401
>UniRef50_UPI0000F32D0C Cluster: Zinc finger CCCH domain-containing
protein 6.; n=1; Bos taurus|Rep: Zinc finger CCCH
domain-containing protein 6. - Bos Taurus
Length = 770
Score = 32.3 bits (70), Expect = 9.6
Identities = 16/26 (61%), Positives = 19/26 (73%)
Frame = +3
Query: 69 GNVRPYARRGSMS*GVPLQTPGSVLS 146
G + PYA + S S G+PL TPGSVLS
Sbjct: 604 GALPPYAPKLSSSTGLPLGTPGSVLS 629
>UniRef50_A0L8H8 Cluster: DNA repair protein RecN; n=2; cellular
organisms|Rep: DNA repair protein RecN - Magnetococcus
sp. (strain MC-1)
Length = 560
Score = 32.3 bits (70), Expect = 9.6
Identities = 20/65 (30%), Positives = 29/65 (44%)
Frame = +3
Query: 342 TPFRQWYESHYTLPLGRKKGAKLTEAEEAIINKKRSQKTARKYLARQRLAKVEGALXEQF 521
T +R WYESH L R+KG E + + +TA Y ++ ++E
Sbjct: 162 TLYRSWYESHKALEQLREKGRDAAERRAFLSFQLEELETAGVYPGEEQ--ELEHQRTRLA 219
Query: 522 HTGRL 536
H GRL
Sbjct: 220 HAGRL 224
>UniRef50_Q962J8 Cluster: PV1H14180_P; n=2; Plasmodium vivax|Rep:
PV1H14180_P - Plasmodium vivax
Length = 1011
Score = 32.3 bits (70), Expect = 9.6
Identities = 12/36 (33%), Positives = 25/36 (69%)
Frame = +3
Query: 396 KGAKLTEAEEAIINKKRSQKTARKYLARQRLAKVEG 503
+G KL EAE+ ++ +++S+ A K L ++ + ++EG
Sbjct: 586 EGGKLMEAEKKLLEEEKSRVDAEKKLMQEEMTRIEG 621
>UniRef50_A7F1W3 Cluster: Putative uncharacterized protein; n=1;
Sclerotinia sclerotiorum 1980|Rep: Putative
uncharacterized protein - Sclerotinia sclerotiorum 1980
Length = 622
Score = 32.3 bits (70), Expect = 9.6
Identities = 14/30 (46%), Positives = 18/30 (60%)
Frame = -3
Query: 292 NSLLDALYTTSMIRVLRVEHSDPQEKLPVS 203
N L D +Y T I +R EH DP++ LP S
Sbjct: 309 NLLFDTIYATPPIARVRSEHEDPRDNLPDS 338
>UniRef50_O58830 Cluster: 30S ribosomal protein S8e; n=6;
Archaea|Rep: 30S ribosomal protein S8e - Pyrococcus
horikoshii
Length = 127
Score = 32.3 bits (70), Expect = 9.6
Identities = 15/29 (51%), Positives = 18/29 (62%)
Frame = +2
Query: 59 PPAGKRAPIRKKRKYELGRPAANTRLGPQ 145
P G+ RKKRK ELGR +NTR+ Q
Sbjct: 12 PSGGRIVLARKKRKRELGREPSNTRVAEQ 40
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 614,099,368
Number of Sequences: 1657284
Number of extensions: 11865680
Number of successful extensions: 34531
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 33366
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 34512
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 45221970467
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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