Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP02_F_L09
         (543 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

07_03_1580 + 27888275-27888360,27888755-27888871,27888964-278890...    30   1.0  
03_04_0016 + 16461542-16461566,16462701-16462732,16463015-164631...    29   3.2  
07_03_1260 - 25260872-25261101,25261199-25261312,25261473-252615...    28   4.2  
06_01_0027 - 271199-271424,271628-272095,272721-273018,273133-27...    27   7.3  
01_06_1472 - 37609732-37609851,37609883-37610104,37610542-376109...    27   9.7  

>07_03_1580 +
           27888275-27888360,27888755-27888871,27888964-27889045,
           27889710-27889821,27889958-27890071,27890163-27890326
          Length = 224

 Score = 30.3 bits (65), Expect = 1.0
 Identities = 10/13 (76%), Positives = 13/13 (100%)
 Frame = +1

Query: 499 QPWDDETDMKEME 537
           +PWDDETDMK++E
Sbjct: 143 KPWDDETDMKKLE 155


>03_04_0016 +
           16461542-16461566,16462701-16462732,16463015-16463100,
           16463189-16463305,16463399-16463474,16463695-16463818,
           16464482-16464595,16464700-16464947
          Length = 273

 Score = 28.7 bits (61), Expect = 3.2
 Identities = 11/26 (42%), Positives = 18/26 (69%)
 Frame = +1

Query: 97  SALNDLNQYLAEKSYVSGYTPSQADV 174
           + L  L++YL  +SY+SGY  S+ D+
Sbjct: 31  AGLQKLDEYLLTRSYISGYQASKDDM 56



 Score = 27.9 bits (59), Expect = 5.5
 Identities = 11/25 (44%), Positives = 17/25 (68%)
 Frame = +2

Query: 179 VFEQVGKAPAANLPHVLRWYNQIAS 253
           VF  +  APAA+  +V RWY+ I++
Sbjct: 58  VFTSLPSAPAASYVNVTRWYDHISA 82



 Score = 27.9 bits (59), Expect = 5.5
 Identities = 9/13 (69%), Positives = 12/13 (92%)
 Frame = +1

Query: 499 QPWDDETDMKEME 537
           +PWDDETDM ++E
Sbjct: 164 KPWDDETDMAKLE 176


>07_03_1260 -
           25260872-25261101,25261199-25261312,25261473-25261596,
           25261755-25261839,25261917-25262033,25262122-25262207
          Length = 251

 Score = 28.3 bits (60), Expect = 4.2
 Identities = 11/26 (42%), Positives = 17/26 (65%)
 Frame = +1

Query: 97  SALNDLNQYLAEKSYVSGYTPSQADV 174
           + L  L++YL  +SY+SGY  S  D+
Sbjct: 12  AGLKKLDEYLLTRSYISGYQASNDDL 37



 Score = 27.9 bits (59), Expect = 5.5
 Identities = 9/13 (69%), Positives = 12/13 (92%)
 Frame = +1

Query: 499 QPWDDETDMKEME 537
           +PWDDETDM ++E
Sbjct: 148 KPWDDETDMTKLE 160


>06_01_0027 -
           271199-271424,271628-272095,272721-273018,273133-273343,
           273427-274124,274921-274969,276059-276112,276244-276275,
           276319-276484,276563-276628,276717-276812,276868-276957,
           277302-277398,277496-277575,277709-277753,278006-278134,
           278593-278722,278888-279222,279918-280053,280149-280328,
           280422-280679,280752-281137
          Length = 1409

 Score = 27.5 bits (58), Expect = 7.3
 Identities = 13/38 (34%), Positives = 21/38 (55%)
 Frame = -1

Query: 240 LYHRSTWGRLAAGALPTCSNTLNISLRRSVSRHVAFLS 127
           L   S+W +L +  LP     + I+ +R+VSR+   LS
Sbjct: 354 LIENSSWDKLRSDQLPDADLPIWIAAQRAVSRYEGILS 391


>01_06_1472 -
           37609732-37609851,37609883-37610104,37610542-37610922,
           37612583-37612816,37613589-37613738,37613831-37614016,
           37615058-37615120
          Length = 451

 Score = 27.1 bits (57), Expect = 9.7
 Identities = 16/45 (35%), Positives = 21/45 (46%)
 Frame = +3

Query: 186 SKLARRRPLTFPTYYDGIIKLLHTLRLNAKHGLRAPAH*PPVLNP 320
           SKL  +     PT  D +  L+HTL L +  G R      P+L P
Sbjct: 322 SKLISKTDAQAPTVEDELSFLMHTLTLISSGGCRFHLECNPILYP 366


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,886,273
Number of Sequences: 37544
Number of extensions: 228476
Number of successful extensions: 584
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 567
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 584
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1210221432
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)