Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP02_F_L09
         (543 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L25599-6|AAA28051.1|  213|Caenorhabditis elegans Hypothetical pr...    66   2e-11
Z95559-20|CAB63360.2|  263|Caenorhabditis elegans Hypothetical p...    35   0.044
Z75549-4|CAA99919.2|  304|Caenorhabditis elegans Hypothetical pr...    30   1.2  

>L25599-6|AAA28051.1|  213|Caenorhabditis elegans Hypothetical
           protein F54H12.6 protein.
          Length = 213

 Score = 65.7 bits (153), Expect = 2e-11
 Identities = 43/110 (39%), Positives = 55/110 (50%), Gaps = 3/110 (2%)
 Frame = +2

Query: 179 VFEQVGKAP-AANLPHVLRWYNQIASYTSAERKTWSQ--GTSPLXXXXXXXXXXXXXXXX 349
           +F  +G AP A+  P+V RWY  +ASYT AERKTW+   G++P                 
Sbjct: 36  LFAALGSAPNASTYPNVARWYANVASYTDAERKTWASAGGSAP------------AAAAA 83

Query: 350 XXXXVDLFGSGXXXXXXXXXXXXXXXLKAYADKKSKKPALIAKSSILLDV 499
                DLFGS                L AYA+KK+KK   IAKSS++LDV
Sbjct: 84  DGDDFDLFGSDDEEEDAEKAKIVEERLAAYAEKKAKKAGPIAKSSVILDV 133



 Score = 29.1 bits (62), Expect = 2.2
 Identities = 10/13 (76%), Positives = 12/13 (92%)
 Frame = +1

Query: 499 QPWDDETDMKEME 537
           +PWDDETD+ EME
Sbjct: 134 KPWDDETDLGEME 146


>Z95559-20|CAB63360.2|  263|Caenorhabditis elegans Hypothetical
           protein Y41E3.10a protein.
          Length = 263

 Score = 34.7 bits (76), Expect = 0.044
 Identities = 20/45 (44%), Positives = 23/45 (51%)
 Frame = +2

Query: 365 DLFGSGXXXXXXXXXXXXXXXLKAYADKKSKKPALIAKSSILLDV 499
           DLFGS                L AYA KK+ K   IAKSS++LDV
Sbjct: 139 DLFGSEDEEEDEEKKKVVEERLAAYAAKKATKAGPIAKSSVILDV 183



 Score = 29.1 bits (62), Expect = 2.2
 Identities = 10/13 (76%), Positives = 12/13 (92%)
 Frame = +1

Query: 499 QPWDDETDMKEME 537
           +PWDDETD+ EME
Sbjct: 184 KPWDDETDLGEME 196


>Z75549-4|CAA99919.2|  304|Caenorhabditis elegans Hypothetical
           protein T19C4.4 protein.
          Length = 304

 Score = 29.9 bits (64), Expect = 1.2
 Identities = 11/31 (35%), Positives = 21/31 (67%)
 Frame = -1

Query: 522 IGFIIPWLTSRRIEDLAMRAGFLDFLSAYAF 430
           + +I+P+++SR + D  MR  ++D   +YAF
Sbjct: 137 LAYILPFMSSRVVWDYPMRVEYVDETDSYAF 167


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,456,134
Number of Sequences: 27780
Number of extensions: 179042
Number of successful extensions: 448
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 431
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 448
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1091917214
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)