Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP02_F_L08
         (620 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U09586-3|AAC47272.1|  470|Tribolium castaneum integrase protein.       22   4.8  
EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4 prot...    21   6.3  
DQ138189-1|ABA03053.1|  162|Tribolium castaneum bursicon protein.      21   6.3  
AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain tran...    21   6.3  
AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia or...    21   6.3  
AF187068-1|AAF03888.1|  477|Tribolium castaneum proboscipedia or...    21   6.3  
EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock prote...    21   8.3  
AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxida...    21   8.3  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    21   8.3  

>U09586-3|AAC47272.1|  470|Tribolium castaneum integrase protein.
          Length = 470

 Score = 21.8 bits (44), Expect = 4.8
 Identities = 9/18 (50%), Positives = 12/18 (66%)
 Frame = +3

Query: 264 LKTQTTATVKNKVTQDTR 317
           L+ +    +KNKVT DTR
Sbjct: 400 LEIEDWVLLKNKVTSDTR 417


>EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4
           protein.
          Length = 475

 Score = 21.4 bits (43), Expect = 6.3
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = +3

Query: 489 GLVSAAANSINQYHEV 536
           G+VSAA N +  YH +
Sbjct: 13  GIVSAATNKVVCYHGI 28


>DQ138189-1|ABA03053.1|  162|Tribolium castaneum bursicon protein.
          Length = 162

 Score = 21.4 bits (43), Expect = 6.3
 Identities = 13/51 (25%), Positives = 24/51 (47%)
 Frame = +2

Query: 461 YLCILRCGYWSSISCSKLYKSVS*STI*CPNVEDKEQGACQRSIXARPCNR 613
           + CI RC  +  +S SK+++ +  S + C    ++E         A+P  R
Sbjct: 63  FACIGRCASYIQVSGSKIWQ-MERSCMCCQESGEREASVSLFCPKAKPGER 112


>AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain
           transcription factor Maxillopediaprotein.
          Length = 523

 Score = 21.4 bits (43), Expect = 6.3
 Identities = 14/39 (35%), Positives = 20/39 (51%)
 Frame = -3

Query: 438 LVRILP*TSTQLMMLTVI*IASNNTVPYCSSCHMMVFPS 322
           L R  P T+T +   TV     +NT+P  +S   M FP+
Sbjct: 248 LNRSSPTTATAIASATVTIQNVSNTIPPFASRGSMHFPN 286


>AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia
           ortholog protein.
          Length = 471

 Score = 21.4 bits (43), Expect = 6.3
 Identities = 14/39 (35%), Positives = 20/39 (51%)
 Frame = -3

Query: 438 LVRILP*TSTQLMMLTVI*IASNNTVPYCSSCHMMVFPS 322
           L R  P T+T +   TV     +NT+P  +S   M FP+
Sbjct: 196 LNRSSPTTATAIASATVTIQNVSNTIPPFASRGSMHFPN 234


>AF187068-1|AAF03888.1|  477|Tribolium castaneum proboscipedia
           ortholog protein.
          Length = 477

 Score = 21.4 bits (43), Expect = 6.3
 Identities = 14/39 (35%), Positives = 20/39 (51%)
 Frame = -3

Query: 438 LVRILP*TSTQLMMLTVI*IASNNTVPYCSSCHMMVFPS 322
           L R  P T+T +   TV     +NT+P  +S   M FP+
Sbjct: 379 LNRSSPTTATAIASATVTIQNVSNTIPPFASRGSMHFPN 417


>EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock protein
           90 protein.
          Length = 721

 Score = 21.0 bits (42), Expect = 8.3
 Identities = 8/24 (33%), Positives = 14/24 (58%)
 Frame = +3

Query: 285 TVKNKVTQDTRVWKETPSYDRKSN 356
           T+K K T+D  + K  P + R ++
Sbjct: 268 TIKEKYTEDEELNKTKPIWTRNAD 291


>AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxidase
           subunit 2 protein.
          Length = 683

 Score = 21.0 bits (42), Expect = 8.3
 Identities = 10/23 (43%), Positives = 15/23 (65%), Gaps = 1/23 (4%)
 Frame = -2

Query: 433 AYPAIDVNTT-NDVNRDLDSIKQ 368
           A+P+   N    D+NR++D IKQ
Sbjct: 281 AWPSRVANQKLRDLNREVDQIKQ 303


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 21.0 bits (42), Expect = 8.3
 Identities = 16/45 (35%), Positives = 20/45 (44%), Gaps = 3/45 (6%)
 Frame = +3

Query: 399 SLVVLTSMAGYALAPAPFQLTTFAFCAV---GTGLVSAAANSINQ 524
           S +  T +A  ALA  PF   +   C V     G VS A   I+Q
Sbjct: 273 SQIKWTRIAYMALASVPFIFDSIHLCDVCYSTIGTVSKAGELIHQ 317


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 150,132
Number of Sequences: 336
Number of extensions: 3289
Number of successful extensions: 9
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15875032
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)