Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP02_F_L08
         (620 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY058639-1|AAL13868.1|  391|Drosophila melanogaster LD33876p pro...   133   2e-31
AE014134-1840|AAF52915.1|  391|Drosophila melanogaster CG5037-PA...   133   2e-31
BT023904-1|ABA81838.1|  563|Drosophila melanogaster IP14421p pro...    31   1.3  
AY113532-1|AAM29537.1|  518|Drosophila melanogaster RE60854p pro...    31   1.3  
AE014296-574|AAN11534.1|  512|Drosophila melanogaster CG15812-PB...    31   1.3  
AE014296-573|AAF47724.2|  518|Drosophila melanogaster CG15812-PA...    31   1.3  
AY071291-1|AAL48913.1|  535|Drosophila melanogaster RE31829p pro...    28   8.9  

>AY058639-1|AAL13868.1|  391|Drosophila melanogaster LD33876p
           protein.
          Length = 391

 Score =  133 bits (321), Expect = 2e-31
 Identities = 76/139 (54%), Positives = 91/139 (65%), Gaps = 5/139 (3%)
 Frame = +3

Query: 219 LARISTAQNWRSKVPLKTQTTATVKN--KVTQ--DTRV-WKETPSYDRKSNTGQYCLMLS 383
           L R STA    S+      T + V    KV    D+++ W  +P Y     T      LS
Sbjct: 22  LIRYSTAATIASQDDKGVTTASPVSQAGKVQHLPDSQITWMPSP-YTMPGKTLSQYKKLS 80

Query: 384 KSRLTSLVVLTSMAGYALAPAPFQLTTFAFCAVGTGLVSAAANSINQYHEVPFDAQMSRT 563
           K RLTSLVV+T+M GYA+APA F  TTFA C +GTGLVSAAAN+INQYHEVPFD+QMSRT
Sbjct: 81  KFRLTSLVVITTMGGYAMAPAAFDPTTFAMCTLGTGLVSAAANAINQYHEVPFDSQMSRT 140

Query: 564 KNRVLVKGLLXPVHAIGFA 620
           KNRVLV G + P+HA+ FA
Sbjct: 141 KNRVLVTGQMTPLHAVTFA 159


>AE014134-1840|AAF52915.1|  391|Drosophila melanogaster CG5037-PA
           protein.
          Length = 391

 Score =  133 bits (321), Expect = 2e-31
 Identities = 76/139 (54%), Positives = 91/139 (65%), Gaps = 5/139 (3%)
 Frame = +3

Query: 219 LARISTAQNWRSKVPLKTQTTATVKN--KVTQ--DTRV-WKETPSYDRKSNTGQYCLMLS 383
           L R STA    S+      T + V    KV    D+++ W  +P Y     T      LS
Sbjct: 22  LIRYSTAATIASQDDKGVTTASPVSQAGKVQHLPDSQITWMPSP-YTMPGKTLSQYKKLS 80

Query: 384 KSRLTSLVVLTSMAGYALAPAPFQLTTFAFCAVGTGLVSAAANSINQYHEVPFDAQMSRT 563
           K RLTSLVV+T+M GYA+APA F  TTFA C +GTGLVSAAAN+INQYHEVPFD+QMSRT
Sbjct: 81  KFRLTSLVVITTMGGYAMAPAAFDPTTFAMCTLGTGLVSAAANAINQYHEVPFDSQMSRT 140

Query: 564 KNRVLVKGLLXPVHAIGFA 620
           KNRVLV G + P+HA+ FA
Sbjct: 141 KNRVLVTGQMTPLHAVTFA 159


>BT023904-1|ABA81838.1|  563|Drosophila melanogaster IP14421p
           protein.
          Length = 563

 Score = 31.1 bits (67), Expect = 1.3
 Identities = 18/46 (39%), Positives = 27/46 (58%)
 Frame = +3

Query: 132 VPCCLKHGYVGVYSKPVLFKITNNTLFQHLARISTAQNWRSKVPLK 269
           V  CL  G    ++   LF+I  +TL++HL R +T+QN + K  LK
Sbjct: 510 VHACLNEGMSQNHAAN-LFEIPKSTLWRHLQRPTTSQNKKVKKELK 554


>AY113532-1|AAM29537.1|  518|Drosophila melanogaster RE60854p
           protein.
          Length = 518

 Score = 31.1 bits (67), Expect = 1.3
 Identities = 18/46 (39%), Positives = 27/46 (58%)
 Frame = +3

Query: 132 VPCCLKHGYVGVYSKPVLFKITNNTLFQHLARISTAQNWRSKVPLK 269
           V  CL  G    ++   LF+I  +TL++HL R +T+QN + K  LK
Sbjct: 465 VHACLNEGMSQNHAAN-LFEIPKSTLWRHLQRRTTSQNKKVKKELK 509


>AE014296-574|AAN11534.1|  512|Drosophila melanogaster CG15812-PB,
           isoform B protein.
          Length = 512

 Score = 31.1 bits (67), Expect = 1.3
 Identities = 18/46 (39%), Positives = 27/46 (58%)
 Frame = +3

Query: 132 VPCCLKHGYVGVYSKPVLFKITNNTLFQHLARISTAQNWRSKVPLK 269
           V  CL  G    ++   LF+I  +TL++HL R +T+QN + K  LK
Sbjct: 459 VHACLNEGMSQNHAAN-LFEIPKSTLWRHLQRRTTSQNKKVKKELK 503


>AE014296-573|AAF47724.2|  518|Drosophila melanogaster CG15812-PA,
           isoform A protein.
          Length = 518

 Score = 31.1 bits (67), Expect = 1.3
 Identities = 18/46 (39%), Positives = 27/46 (58%)
 Frame = +3

Query: 132 VPCCLKHGYVGVYSKPVLFKITNNTLFQHLARISTAQNWRSKVPLK 269
           V  CL  G    ++   LF+I  +TL++HL R +T+QN + K  LK
Sbjct: 465 VHACLNEGMSQNHAAN-LFEIPKSTLWRHLQRRTTSQNKKVKKELK 509


>AY071291-1|AAL48913.1|  535|Drosophila melanogaster RE31829p
           protein.
          Length = 535

 Score = 28.3 bits (60), Expect = 8.9
 Identities = 20/69 (28%), Positives = 26/69 (37%), Gaps = 3/69 (4%)
 Frame = +3

Query: 240 QNWRSKVPLKTQTTATVKNKVTQDTRVWKETPSYDRKSNTGQYCLMLSKS---RLTSLVV 410
           +NW       T     V  K   + R W       RK    Q CL+   +   + T+L V
Sbjct: 87  ENWMESFEPATSDDLAVHPKKVGELRDWLRHCEAVRKKFPAQMCLLTGPTGAGKTTTLRV 146

Query: 411 LTSMAGYAL 437
           LT   GY L
Sbjct: 147 LTKEFGYQL 155


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,904,815
Number of Sequences: 53049
Number of extensions: 591898
Number of successful extensions: 1152
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1113
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1151
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2559155400
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)