Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP02_F_L07
(581 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P30050 Cluster: 60S ribosomal protein L12; n=158; Eukar... 267 1e-70
UniRef50_Q4V5X9 Cluster: IP07888p; n=8; Eukaryota|Rep: IP07888p ... 265 5e-70
UniRef50_Q59FI9 Cluster: Ribosomal protein L12 variant; n=56; Fu... 265 5e-70
UniRef50_Q0CUU2 Cluster: 60S ribosomal protein L12; n=1; Aspergi... 210 2e-53
UniRef50_Q01BX3 Cluster: Putative 60S ribosomal protein L12; n=1... 205 5e-52
UniRef50_Q38D53 Cluster: 60S ribosomal protein L12, putative; n=... 192 4e-48
UniRef50_Q4Y4I9 Cluster: 60S ribosomal protein L12, putative; n=... 188 8e-47
UniRef50_A0BE24 Cluster: Chromosome undetermined scaffold_101, w... 178 7e-44
UniRef50_UPI0000D9D615 Cluster: PREDICTED: similar to 60S riboso... 161 1e-38
UniRef50_Q8SR84 Cluster: 60S ribosomal protein L12; n=4; Eukaryo... 160 2e-38
UniRef50_Q6DI58 Cluster: Rpl12 protein; n=1; Mus musculus|Rep: R... 159 4e-38
UniRef50_Q7QQ98 Cluster: GLP_243_12971_12423; n=1; Giardia lambl... 133 3e-30
UniRef50_P87267 Cluster: Putative uncharacterized protein YDR417... 117 2e-25
UniRef50_UPI00005BFE3C Cluster: PREDICTED: hypothetical protein;... 112 5e-24
UniRef50_UPI0001560E03 Cluster: PREDICTED: hypothetical protein;... 107 1e-22
UniRef50_Q6CYA6 Cluster: Similarity; n=1; Kluyveromyces lactis|R... 91 1e-17
UniRef50_A7TCB3 Cluster: Predicted protein; n=1; Nematostella ve... 91 2e-17
UniRef50_Q3LW80 Cluster: Ribosomal protein L2; n=1; Bigelowiella... 87 3e-16
UniRef50_Q4YLV7 Cluster: Putative uncharacterized protein; n=1; ... 85 1e-15
UniRef50_UPI00015533B4 Cluster: PREDICTED: similar to ribosomal ... 82 8e-15
UniRef50_P54030 Cluster: 50S ribosomal protein L11P; n=16; Archa... 81 2e-14
UniRef50_P62445 Cluster: 50S ribosomal protein L11P; n=9; Archae... 79 1e-13
UniRef50_P35025 Cluster: 50S ribosomal protein L11P; n=15; Archa... 74 3e-12
UniRef50_Q97BN1 Cluster: 50S ribosomal protein L11P; n=4; Euryar... 64 2e-09
UniRef50_P62446 Cluster: 50S ribosomal protein L11P; n=1; Nanoar... 62 7e-09
UniRef50_A2AB20 Cluster: Kinesin family member C1; n=3; Catarrhi... 54 3e-06
UniRef50_Q8FSA7 Cluster: 50S ribosomal protein L11; n=616; cellu... 48 2e-04
UniRef50_P05969 Cluster: 50S ribosomal protein L11P; n=7; Haloba... 44 0.002
UniRef50_Q2S1Q1 Cluster: 50S ribosomal protein L11; n=3; Bacteri... 44 0.003
UniRef50_O83265 Cluster: 50S ribosomal protein L11; n=5; Bacteri... 43 0.006
UniRef50_Q7VRP3 Cluster: 50S ribosomal protein L11; n=4; Bacteri... 42 0.014
UniRef50_Q9PA82 Cluster: 50S ribosomal protein L11; n=13; Proteo... 38 0.13
UniRef50_Q2J5H8 Cluster: Ribosomal protein L11; n=1; Frankia sp.... 38 0.23
UniRef50_A3B9H4 Cluster: Putative uncharacterized protein; n=3; ... 38 0.23
UniRef50_Q16XA5 Cluster: Putative uncharacterized protein; n=1; ... 37 0.40
UniRef50_Q21QS4 Cluster: Major facilitator superfamily MFS_1; n=... 36 0.70
UniRef50_Q9VGN4 Cluster: CG31374-PB, isoform B; n=4; Sophophora|... 34 2.8
UniRef50_UPI00006615FB Cluster: Homolog of Homo sapiens "Splice ... 33 6.5
UniRef50_Q1ZDC0 Cluster: Putative uncharacterized protein; n=1; ... 32 8.6
UniRef50_Q89W61 Cluster: 30S ribosomal protein S20; n=12; Alphap... 32 8.6
>UniRef50_P30050 Cluster: 60S ribosomal protein L12; n=158;
Eukaryota|Rep: 60S ribosomal protein L12 - Homo sapiens
(Human)
Length = 165
Score = 267 bits (654), Expect = 1e-70
Identities = 124/154 (80%), Positives = 141/154 (91%)
Frame = +3
Query: 120 MPPKFDPNEIKIVNLRCVGGEVGATSSLAPKIGPLGLSPKKVGDDIAKATSDWKGLKITV 299
MPPKFDPNEIK+V LRC GGEVGATS+LAPKIGPLGLSPKKVGDDIAKAT DWKGL+ITV
Sbjct: 1 MPPKFDPNEIKVVYLRCTGGEVGATSALAPKIGPLGLSPKKVGDDIAKATGDWKGLRITV 60
Query: 300 QLTVQNRQAQIAVVPSAAALIIRALKEPPRDRKKQKNIKHNGNISLEXVVGIAKIMRNRS 479
+LT+QNRQAQI VVPSA+ALII+ALKEPPRDRKKQKNIKH+GNI+ + +V IA+ MR+RS
Sbjct: 61 KLTIQNRQAQIEVVPSASALIIKALKEPPRDRKKQKNIKHSGNITFDEIVNIARQMRHRS 120
Query: 480 MARYLSGSXKEILGTAQSVGCTVEGXPPHDLIDD 581
+AR LSG+ KEILGTAQSVGC V+G PHD+IDD
Sbjct: 121 LARELSGTIKEILGTAQSVGCNVDGRHPHDIIDD 154
>UniRef50_Q4V5X9 Cluster: IP07888p; n=8; Eukaryota|Rep: IP07888p -
Drosophila melanogaster (Fruit fly)
Length = 307
Score = 265 bits (650), Expect = 5e-70
Identities = 123/154 (79%), Positives = 140/154 (90%)
Frame = +3
Query: 120 MPPKFDPNEIKIVNLRCVGGEVGATSSLAPKIGPLGLSPKKVGDDIAKATSDWKGLKITV 299
MPPKFDP E+K+V LRCVGGEVGATSSLAPKIGPLGLSPKK+GDDIAKATSDWKGLKITV
Sbjct: 143 MPPKFDPTEVKLVYLRCVGGEVGATSSLAPKIGPLGLSPKKIGDDIAKATSDWKGLKITV 202
Query: 300 QLTVQNRQAQIAVVPSAAALIIRALKEPPRDRKKQKNIKHNGNISLEXVVGIAKIMRNRS 479
LT+QNRQA I+VVPSAA+LII+ALKEPPRDRKKQKNIKH+GNI E ++ IA++MR RS
Sbjct: 203 CLTIQNRQAAISVVPSAASLIIKALKEPPRDRKKQKNIKHSGNIGFEDILAIARVMRPRS 262
Query: 480 MARYLSGSXKEILGTAQSVGCTVEGXPPHDLIDD 581
MAR L G+ KE+LGTAQSVGCTV+G PHD+ID+
Sbjct: 263 MARELKGTCKEVLGTAQSVGCTVDGKHPHDVIDE 296
>UniRef50_Q59FI9 Cluster: Ribosomal protein L12 variant; n=56;
Fungi/Metazoa group|Rep: Ribosomal protein L12 variant -
Homo sapiens (Human)
Length = 197
Score = 265 bits (650), Expect = 5e-70
Identities = 123/154 (79%), Positives = 140/154 (90%)
Frame = +3
Query: 120 MPPKFDPNEIKIVNLRCVGGEVGATSSLAPKIGPLGLSPKKVGDDIAKATSDWKGLKITV 299
MPPKFDPNEIK+V LRC GGEVGATS+LAPKIGPLGLSPKKVGDDIAKAT DWKGL+ITV
Sbjct: 33 MPPKFDPNEIKVVYLRCTGGEVGATSALAPKIGPLGLSPKKVGDDIAKATGDWKGLRITV 92
Query: 300 QLTVQNRQAQIAVVPSAAALIIRALKEPPRDRKKQKNIKHNGNISLEXVVGIAKIMRNRS 479
+LT+QNRQAQI VVPSA+ALII+ALKEPPRDRKKQKNIKH+GNI+ + +V I + MR+RS
Sbjct: 93 KLTIQNRQAQIEVVPSASALIIKALKEPPRDRKKQKNIKHSGNITFDEIVNIVRQMRHRS 152
Query: 480 MARYLSGSXKEILGTAQSVGCTVEGXPPHDLIDD 581
+AR LSG+ KEILGTAQSVGC V+G PHD+IDD
Sbjct: 153 LARELSGTIKEILGTAQSVGCNVDGRHPHDIIDD 186
>UniRef50_Q0CUU2 Cluster: 60S ribosomal protein L12; n=1;
Aspergillus terreus NIH2624|Rep: 60S ribosomal protein
L12 - Aspergillus terreus (strain NIH 2624)
Length = 189
Score = 210 bits (513), Expect = 2e-53
Identities = 104/178 (58%), Positives = 133/178 (74%), Gaps = 24/178 (13%)
Frame = +3
Query: 120 MPPKFDPNEIKIVNLRCVGGEVGATSSLAPKIGPLGLSPKKVGDDIAKATSDW------- 278
MPPKFDPNE+K+++LR GGEVGA S+LAPKIGPLGLSPKK+G+DIAK T DW
Sbjct: 1 MPPKFDPNEVKVIHLRVTGGEVGAQSALAPKIGPLGLSPKKIGEDIAKNTGDWVSTQYGC 60
Query: 279 -----------------KGLKITVQLTVQNRQAQIAVVPSAAALIIRALKEPPRDRKKQK 407
KGL++TV+LT+QNRQA ++VVPSA++L+I+ALKEPPRDRKK+K
Sbjct: 61 CDARKEQWLTWTVSAVQKGLRVTVKLTIQNRQAAVSVVPSASSLVIKALKEPPRDRKKEK 120
Query: 408 NIKHNGNISLEXVVGIAKIMRNRSMARYLSGSXKEILGTAQSVGCTVEGXPPHDLIDD 581
NIKHN +I L+ ++ IA+ MR+RS+A+ L G+ EILGTA SVGC V+G P D+ DD
Sbjct: 121 NIKHNKSIPLDDIIEIARTMRSRSLAKELKGTVLEILGTAFSVGCQVDGRSPKDVSDD 178
>UniRef50_Q01BX3 Cluster: Putative 60S ribosomal protein L12; n=1;
Ostreococcus tauri|Rep: Putative 60S ribosomal protein
L12 - Ostreococcus tauri
Length = 230
Score = 205 bits (501), Expect = 5e-52
Identities = 96/144 (66%), Positives = 122/144 (84%), Gaps = 1/144 (0%)
Frame = +3
Query: 117 KMPPKFDPNEIKIVNLRCVGGEVGATSSLAPKIGPLGLSPKKVGDDIAKATS-DWKGLKI 293
KMPPKFDPN + +R GGEVGA SSLAPKIGPLGLSPKKVG+DIAK T+ DWKGL++
Sbjct: 62 KMPPKFDPNATLEIFMRATGGEVGAASSLAPKIGPLGLSPKKVGEDIAKETAKDWKGLRV 121
Query: 294 TVQLTVQNRQAQIAVVPSAAALIIRALKEPPRDRKKQKNIKHNGNISLEXVVGIAKIMRN 473
TV+LTVQNRQA+++VVP+A+AL+I+ALKEP +DRKK K I H GN SL+ ++ +A++MR
Sbjct: 122 TVKLTVQNRQAKVSVVPTASALVIKALKEPFQDRKKVKGITHTGNCSLDDIIEVARVMRP 181
Query: 474 RSMARYLSGSXKEILGTAQSVGCT 545
+S A+ L+G+ KEILGTA+SVGCT
Sbjct: 182 KSCAKNLAGTVKEILGTAKSVGCT 205
>UniRef50_Q38D53 Cluster: 60S ribosomal protein L12, putative; n=3;
Trypanosoma|Rep: 60S ribosomal protein L12, putative -
Trypanosoma brucei
Length = 219
Score = 192 bits (469), Expect = 4e-48
Identities = 90/149 (60%), Positives = 112/149 (75%)
Frame = +3
Query: 117 KMPPKFDPNEIKIVNLRCVGGEVGATSSLAPKIGPLGLSPKKVGDDIAKATSDWKGLKIT 296
KMPPKFDPN+ V +R VGGEV AT+SLAPK+GPLGL+ KK+G+DIAK+T DWKGLK+T
Sbjct: 55 KMPPKFDPNQEITVVVRAVGGEVPATASLAPKVGPLGLNAKKIGEDIAKSTKDWKGLKVT 114
Query: 297 VQLTVQNRQAQIAVVPSAAALIIRALKEPPRDRKKQKNIKHNGNISLEXVVGIAKIMRNR 476
QL V+NR A + V PS A+ +IRALKEPPRDRKK KNIKH+GNI+ ++ IAK
Sbjct: 115 CQLRVKNRVATVIVTPSVASRLIRALKEPPRDRKKVKNIKHDGNIAFSEILKIAKESAPN 174
Query: 477 SMARYLSGSXKEILGTAQSVGCTVEGXPP 563
SM + E+LGTA S+GCT++G P
Sbjct: 175 SMGASMKSVVMEVLGTAVSIGCTIDGEHP 203
>UniRef50_Q4Y4I9 Cluster: 60S ribosomal protein L12, putative; n=9;
Eukaryota|Rep: 60S ribosomal protein L12, putative -
Plasmodium chabaudi
Length = 177
Score = 188 bits (458), Expect = 8e-47
Identities = 85/136 (62%), Positives = 109/136 (80%)
Frame = +3
Query: 156 VNLRCVGGEVGATSSLAPKIGPLGLSPKKVGDDIAKATSDWKGLKITVQLTVQNRQAQIA 335
V +R VGGEVGA+S L+PK+GPLGLSPKK+GDDIAK T WKGLKI V+LT+QNRQA+I
Sbjct: 25 VYIRQVGGEVGASSVLSPKLGPLGLSPKKIGDDIAKETQSWKGLKICVKLTIQNRQAKIE 84
Query: 336 VVPSAAALIIRALKEPPRDRKKQKNIKHNGNISLEXVVGIAKIMRNRSMARYLSGSXKEI 515
VVP++A+++++ L E PRDRKK KNIKHNGN+ +E V IA+ M+ +S A+ G+ KEI
Sbjct: 85 VVPTSASMVLKELNEAPRDRKKVKNIKHNGNLKIEQVYSIARAMKEKSRAKEFRGTVKEI 144
Query: 516 LGTAQSVGCTVEGXPP 563
LGT S+GCTV+G P
Sbjct: 145 LGTCNSIGCTVDGKKP 160
>UniRef50_A0BE24 Cluster: Chromosome undetermined scaffold_101,
whole genome shotgun sequence; n=2; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_101,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 164
Score = 178 bits (434), Expect = 7e-44
Identities = 75/152 (49%), Positives = 114/152 (75%)
Frame = +3
Query: 120 MPPKFDPNEIKIVNLRCVGGEVGATSSLAPKIGPLGLSPKKVGDDIAKATSDWKGLKITV 299
MPPK DPNE++++N++ GGE G S+LAPK+GPLGL+PK+VGD I + WKG+++ V
Sbjct: 1 MPPKVDPNEVRLINIKVFGGEGGPASTLAPKLGPLGLNPKQVGDKIIAESGKWKGIRVMV 60
Query: 300 QLTVQNRQAQIAVVPSAAALIIRALKEPPRDRKKQKNIKHNGNISLEXVVGIAKIMRNRS 479
L QNR A + V+P+++AL+I+ + RDRKK KN+KHNGN++LE V+ +A+ + +S
Sbjct: 61 NLRCQNRNADVTVIPTSSALLIKEIGGYERDRKKTKNVKHNGNLTLEQVIKVARAVEEKS 120
Query: 480 MARYLSGSXKEILGTAQSVGCTVEGXPPHDLI 575
+A+ +G+ K++LGTAQS+G TV+G P +I
Sbjct: 121 LAKTFTGTVKQVLGTAQSLGATVDGQPVKAII 152
>UniRef50_UPI0000D9D615 Cluster: PREDICTED: similar to 60S ribosomal
protein L12; n=1; Macaca mulatta|Rep: PREDICTED: similar
to 60S ribosomal protein L12 - Macaca mulatta
Length = 268
Score = 161 bits (390), Expect = 1e-38
Identities = 89/152 (58%), Positives = 105/152 (69%)
Frame = +3
Query: 126 PKFDPNEIKIVNLRCVGGEVGATSSLAPKIGPLGLSPKKVGDDIAKATSDWKGLKITVQL 305
PKF P EIK+ LRC G EV A S+LAPKI PLGLSPK KG
Sbjct: 131 PKFGPKEIKVAYLRCTGDEVSAMSALAPKISPLGLSPK-------------KG------- 170
Query: 306 TVQNRQAQIAVVPSAAALIIRALKEPPRDRKKQKNIKHNGNISLEXVVGIAKIMRNRSMA 485
QAQI VVPSA+ALII+ALKEP RDRKKQKNIKH+GNI+ + +V IA+ MR+RS+
Sbjct: 171 -----QAQIEVVPSASALIIKALKEPARDRKKQKNIKHSGNITSDEIVNIARQMRHRSLD 225
Query: 486 RYLSGSXKEILGTAQSVGCTVEGXPPHDLIDD 581
R LSG+ KE+LGTAQS+GC V+G PH +IDD
Sbjct: 226 RELSGTIKELLGTAQSLGCNVDGRHPHKIIDD 257
>UniRef50_Q8SR84 Cluster: 60S ribosomal protein L12; n=4;
Eukaryota|Rep: 60S ribosomal protein L12 -
Encephalitozoon cuniculi
Length = 166
Score = 160 bits (389), Expect = 2e-38
Identities = 82/148 (55%), Positives = 112/148 (75%), Gaps = 2/148 (1%)
Frame = +3
Query: 135 DPNEIKIVNLRCVGGEV-GATSSLAPKIGPLGLSPKKVGDDIAKATSDWKGLKITVQLTV 311
DP + K + L+ VGGEV GAT LA ++GPLGLS K VG+DI KAT+D+K LK+ VQL +
Sbjct: 8 DP-DTKYIKLQVVGGEVPGAT--LAQRVGPLGLSSKVVGEDIKKATADYKSLKVHVQLAI 64
Query: 312 QNRQAQIAVVPSAAALIIRALKEPPRDRKKQKNIKHNGNISLEXVVGIAKIMR-NRSMAR 488
++R+A + V PS A LII++LKEPPRDRKK+KNI HNG++ + VV IA+I R +RS +
Sbjct: 65 KDRKATVEVQPSVATLIIKSLKEPPRDRKKEKNILHNGSLRMTEVVDIARIARSSRSYSN 124
Query: 489 YLSGSXKEILGTAQSVGCTVEGXPPHDL 572
LSG+ KE+LGT +S+GC V+G P ++
Sbjct: 125 SLSGTVKEVLGTCKSIGCKVDGKCPKEV 152
>UniRef50_Q6DI58 Cluster: Rpl12 protein; n=1; Mus musculus|Rep:
Rpl12 protein - Mus musculus (Mouse)
Length = 218
Score = 159 bits (386), Expect = 4e-38
Identities = 75/85 (88%), Positives = 81/85 (95%)
Frame = +3
Query: 156 VNLRCVGGEVGATSSLAPKIGPLGLSPKKVGDDIAKATSDWKGLKITVQLTVQNRQAQIA 335
V LRC GGEVGATS+LAPKIGPLGLSPKKVGDDIAKAT DWKGL+ITV+LT+QNRQAQI
Sbjct: 106 VYLRCTGGEVGATSALAPKIGPLGLSPKKVGDDIAKATGDWKGLRITVKLTIQNRQAQIE 165
Query: 336 VVPSAAALIIRALKEPPRDRKKQKN 410
VVPSA+ALII+ALKEPPRDRKKQKN
Sbjct: 166 VVPSASALIIKALKEPPRDRKKQKN 190
>UniRef50_Q7QQ98 Cluster: GLP_243_12971_12423; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_243_12971_12423 - Giardia lamblia
ATCC 50803
Length = 182
Score = 133 bits (322), Expect = 3e-30
Identities = 63/144 (43%), Positives = 97/144 (67%)
Frame = +3
Query: 120 MPPKFDPNEIKIVNLRCVGGEVGATSSLAPKIGPLGLSPKKVGDDIAKATSDWKGLKITV 299
MPP+ DPN ++ LR GG + A ++L PKIGP GL PK VG+ I +AT +KG+++ V
Sbjct: 1 MPPRADPNAEIVLYLRVKGGIIPAPNALGPKIGPYGLPPKVVGEKIHEATQGYKGIRVKV 60
Query: 300 QLTVQNRQAQIAVVPSAAALIIRALKEPPRDRKKQKNIKHNGNISLEXVVGIAKIMRNRS 479
++ +NRQ ++VVP+A++L+++AL E PR K + + H G + + V+ IAK +R S
Sbjct: 61 RIVSKNRQPTVSVVPTASSLLVKALGEGPRTIPKGQPLLHTGTVKFDTVLDIAKELRANS 120
Query: 480 MARYLSGSXKEILGTAQSVGCTVE 551
A +G+ E+LG+A+SVGC VE
Sbjct: 121 FALKYAGTVLEVLGSARSVGCKVE 144
>UniRef50_P87267 Cluster: Putative uncharacterized protein YDR417C
precursor; n=1; Saccharomyces cerevisiae|Rep: Putative
uncharacterized protein YDR417C precursor -
Saccharomyces cerevisiae (Baker's yeast)
Length = 123
Score = 117 bits (281), Expect = 2e-25
Identities = 59/99 (59%), Positives = 67/99 (67%)
Frame = -2
Query: 430 MLPLCLIFFCFLRSRGGSLRALMIRAAAEGTTAIWACLF*TVSCTVILRPFQSLVALAMS 251
MLPLCL F F S GGS +A+M + A+GTT ACLF + TV L P SLVALA+S
Sbjct: 1 MLPLCLTFLSFFLSLGGSFKAVMTKEEADGTTEAAACLFWIFNWTVTLIPLNSLVALAIS 60
Query: 250 SPTFLGDRPRGPILGAKDDVAPTSPPTHRKFTILISFGS 134
SPTF GD+P GPI GAK APTSPPT K+ L SFGS
Sbjct: 61 SPTFFGDKPNGPIFGAKAAEAPTSPPTALKYKYLTSFGS 99
>UniRef50_UPI00005BFE3C Cluster: PREDICTED: hypothetical protein;
n=1; Bos taurus|Rep: PREDICTED: hypothetical protein -
Bos taurus
Length = 255
Score = 112 bits (270), Expect = 5e-24
Identities = 51/71 (71%), Positives = 61/71 (85%)
Frame = +3
Query: 369 ALKEPPRDRKKQKNIKHNGNISLEXVVGIAKIMRNRSMARYLSGSXKEILGTAQSVGCTV 548
A KEPPRDRKKQKNIKH+GNI+ + +V IA+ MR+RS+AR LSG+ KEILGTAQSVGC V
Sbjct: 174 AKKEPPRDRKKQKNIKHSGNITFDEIVNIARQMRHRSLARELSGTIKEILGTAQSVGCNV 233
Query: 549 EGXPPHDLIDD 581
+G PHD+IDD
Sbjct: 234 DGRHPHDIIDD 244
>UniRef50_UPI0001560E03 Cluster: PREDICTED: hypothetical protein;
n=1; Equus caballus|Rep: PREDICTED: hypothetical protein
- Equus caballus
Length = 169
Score = 107 bits (258), Expect = 1e-22
Identities = 59/133 (44%), Positives = 80/133 (60%)
Frame = -1
Query: 518 KNLFX*ARKVPGH*SVSHDLRNADYXFKGDVAVVFDIFLLFTVTGRLLKGSDDKGCCRGN 339
++LF +R+ G V H N D KGDV+ V +FLL +V+ L+G DD+G R
Sbjct: 17 QDLFNGSREFSGQRLVLHLSSNVDNLIKGDVSTVLYVFLLLSVSWWFLEGFDDQGRGRRY 76
Query: 338 NSYLGLSVLNCQLHSDLETLPVTCGLGNVITHLFRRQTKRTDFRGQR*CGTDFPADTSQI 159
+ L LSVL+ Q HSD +TLP+T LG+VI HLF RQT+ + GQ GTD P Q+
Sbjct: 77 HLNLSLSVLDRQFHSDPQTLPITSCLGDVIAHLFWRQTQGANLGGQGRRGTDVPTGAPQV 136
Query: 158 HDFNFIWVKLRGH 120
HDF+ + V+L H
Sbjct: 137 HDFDLVGVELGWH 149
>UniRef50_Q6CYA6 Cluster: Similarity; n=1; Kluyveromyces lactis|Rep:
Similarity - Kluyveromyces lactis (Yeast) (Candida
sphaerica)
Length = 202
Score = 91.5 bits (217), Expect = 1e-17
Identities = 52/152 (34%), Positives = 85/152 (55%)
Frame = -1
Query: 569 IMWRXALHSTSN*LCCAKNLFX*ARKVPGH*SVSHDLRNADYXFKGDVAVVFDIFLLFTV 390
++W +++T++ L ++ +V SH L N D F+ V VFD+ +L +V
Sbjct: 31 VVWVLVVNTTTDGLSSTQDFLGDRSQVLTERLFSHLLSNFDDVFQLQVTTVFDVLVLLSV 90
Query: 389 TGRLLKGSDDKGCCRGNNSYLGLSVLNCQLHSDLETLPVTCGLGNVITHLFRRQTKRTDF 210
+ L+ D++ NN LSVL+ QL+S+L+TL + GLG++ T+L QT+ T+
Sbjct: 91 SWWFLQSGDNQRGSGWNNRSSSLSVLDLQLNSNLDTLEILGGLGDIFTNLLWGQTQWTNL 150
Query: 209 RGQR*CGTDFPADTSQIHDFNFIWVKLRGHFV 114
Q T+F D+SQ+ +FIW+KL HFV
Sbjct: 151 WSQSSGSTNFTTDSSQVQVLDFIWIKLWRHFV 182
>UniRef50_A7TCB3 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 136
Score = 90.6 bits (215), Expect = 2e-17
Identities = 39/57 (68%), Positives = 49/57 (85%)
Frame = +3
Query: 408 NIKHNGNISLEXVVGIAKIMRNRSMARYLSGSXKEILGTAQSVGCTVEGXPPHDLID 578
++KHNGNI+L+ V +AK+MR RSMAR+LSG+ KEILGT QSVGCTV+G PHD+ID
Sbjct: 67 SVKHNGNITLDDVTNVAKVMRPRSMARHLSGTVKEILGTCQSVGCTVDGMAPHDVID 123
Score = 66.9 bits (156), Expect = 3e-10
Identities = 30/37 (81%), Positives = 33/37 (89%)
Frame = +3
Query: 120 MPPKFDPNEIKIVNLRCVGGEVGATSSLAPKIGPLGL 230
MPPKF+ NEI+ V LRC GGEVGAT+SLAPKIGPLGL
Sbjct: 1 MPPKFELNEIQYVYLRCTGGEVGATASLAPKIGPLGL 37
>UniRef50_Q3LW80 Cluster: Ribosomal protein L2; n=1; Bigelowiella
natans|Rep: Ribosomal protein L2 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 153
Score = 87.0 bits (206), Expect = 3e-16
Identities = 45/135 (33%), Positives = 82/135 (60%), Gaps = 1/135 (0%)
Frame = +3
Query: 150 KIVNLRCVGGEVGATSSLAPKIGPLGLSPKKVGDDIAKATS-DWKGLKITVQLTVQNRQA 326
K+V ++ GG+V + S LA KIGP GLSPKK+G+D AK T +W G+ +T++LT+ + A
Sbjct: 7 KVVYIKSKGGQVASASVLAQKIGPYGLSPKKIGEDFAKKTKKNWDGIIVTIKLTIIKKNA 66
Query: 327 QIAVVPSAAALIIRALKEPPRDRKKQKNIKHNGNISLEXVVGIAKIMRNRSMARYLSGSX 506
+ +VPS ++L+ R ++ + ++ + ++ I+K ++ +S ++ G
Sbjct: 67 YLKIVPSVSSLLKREMQLYGKPSV----------LTFKQLIKISKKVQTKSYSKAFKGVV 116
Query: 507 KEILGTAQSVGCTVE 551
KE+LGT S+G ++
Sbjct: 117 KEVLGTCCSMGILID 131
>UniRef50_Q4YLV7 Cluster: Putative uncharacterized protein; n=1;
Plasmodium berghei|Rep: Putative uncharacterized protein
- Plasmodium berghei
Length = 84
Score = 85.0 bits (201), Expect = 1e-15
Identities = 39/52 (75%), Positives = 45/52 (86%)
Frame = +3
Query: 153 IVNLRCVGGEVGATSSLAPKIGPLGLSPKKVGDDIAKATSDWKGLKITVQLT 308
IV +R VGGEVGA+S L+PK+GPLGLSPKK+GDDIAK T WKGLKI V+LT
Sbjct: 33 IVYIRQVGGEVGASSVLSPKLGPLGLSPKKIGDDIAKETQSWKGLKICVKLT 84
>UniRef50_UPI00015533B4 Cluster: PREDICTED: similar to ribosomal
protein L12; n=1; Mus musculus|Rep: PREDICTED: similar
to ribosomal protein L12 - Mus musculus
Length = 142
Score = 82.2 bits (194), Expect = 8e-15
Identities = 38/62 (61%), Positives = 48/62 (77%)
Frame = +3
Query: 396 KKQKNIKHNGNISLEXVVGIAKIMRNRSMARYLSGSXKEILGTAQSVGCTVEGXPPHDLI 575
K QK+IKH+G+IS + V MR+RS+AR LSG+ KEILGT+QSVGC V+G PHD+I
Sbjct: 70 KNQKSIKHSGSISFDEFVNTVWQMRHRSLARELSGTIKEILGTSQSVGCNVDGCHPHDII 129
Query: 576 DD 581
DD
Sbjct: 130 DD 131
>UniRef50_P54030 Cluster: 50S ribosomal protein L11P; n=16;
Archaea|Rep: 50S ribosomal protein L11P - Methanococcus
jannaschii
Length = 161
Score = 81.0 bits (191), Expect = 2e-14
Identities = 47/144 (32%), Positives = 83/144 (57%), Gaps = 3/144 (2%)
Frame = +3
Query: 150 KIVNLRCVGGEVGATSSLAPKIGPLGLSPKKVGDDIAKATSDWKGLKITVQLTV--QNRQ 323
++V + GG A L P IGPLG++ +V +I + T D++G+++ V++ V + R+
Sbjct: 4 EVVEVLVTGGRATAGPPLGPAIGPLGVNVMQVVKEINEKTKDYEGMQVPVKVIVDTETRK 63
Query: 324 AQIAV-VPSAAALIIRALKEPPRDRKKQKNIKHNGNISLEXVVGIAKIMRNRSMARYLSG 500
+I V +P ALI + L + + + GN++LE V+ IAK+ ++ ++ L
Sbjct: 64 FEIEVGIPPTTALIKKELGIETAAHEPRHEVV--GNLTLEQVIKIAKMKKDAMLSYTLKN 121
Query: 501 SXKEILGTAQSVGCTVEGXPPHDL 572
+ KE+LGT S+G TVEG P ++
Sbjct: 122 AVKEVLGTCGSMGVTVEGKDPKEV 145
>UniRef50_P62445 Cluster: 50S ribosomal protein L11P; n=9;
Archaea|Rep: 50S ribosomal protein L11P - Methanococcus
maripaludis
Length = 159
Score = 78.6 bits (185), Expect = 1e-13
Identities = 46/143 (32%), Positives = 81/143 (56%), Gaps = 3/143 (2%)
Frame = +3
Query: 150 KIVNLRCVGGEVGATSSLAPKIGPLGLSPKKVGDDIAKATSDWKGLKITVQLTVQN--RQ 323
++V + GG+ A L P IGPLG++ +V I T D++G+ + V++ V R
Sbjct: 4 QVVEILVSGGKATAGPPLGPAIGPLGVNIMQVVQKINNMTKDYEGMSVPVKVIVDTDKRT 63
Query: 324 AQIAV-VPSAAALIIRALKEPPRDRKKQKNIKHNGNISLEXVVGIAKIMRNRSMARYLSG 500
++ V +P A+ALI + + ++ + + GNI++E +V IAK+ ++ +A L
Sbjct: 64 FEVEVGIPPASALIKKEIGIEKGSQEPKHQVA--GNITMEQIVKIAKMKQDAMLAYNLKN 121
Query: 501 SXKEILGTAQSVGCTVEGXPPHD 569
+ KE++GT SVG +VEG P +
Sbjct: 122 ASKEVVGTCVSVGISVEGMTPSE 144
>UniRef50_P35025 Cluster: 50S ribosomal protein L11P; n=15;
Archaea|Rep: 50S ribosomal protein L11P - Sulfolobus
acidocaldarius
Length = 170
Score = 73.7 bits (173), Expect = 3e-12
Identities = 45/148 (30%), Positives = 79/148 (53%), Gaps = 4/148 (2%)
Frame = +3
Query: 150 KIVNLRCVGGEVGATSSLAPKIGPLGLSPKKVGDDIAKATSDWKGLKI--TVQLTVQNRQ 323
K + + GG L P + LGL+ ++V I T+ +KG+ + T+++ ++
Sbjct: 4 KTIKIMVEGGSAKPGPPLGPTLSQLGLNVQEVVKKINDVTAQFKGMSVPVTIEIDSSTKK 63
Query: 324 AQIAV-VPSAAALIIRALK-EPPRDRKKQKNIKHNGNISLEXVVGIAKIMRNRSMARYLS 497
I V VP+ +L+++A+ + P K I GN+ LE + IA + + A+ L+
Sbjct: 64 YDIKVGVPTTTSLLLKAINAQEPSGDPAHKKI---GNLDLEQIADIAIKKKPQLSAKTLT 120
Query: 498 GSXKEILGTAQSVGCTVEGXPPHDLIDD 581
+ K +LGTA+S+G TVEG P D+I +
Sbjct: 121 AAIKSLLGTARSIGITVEGKDPKDVIKE 148
>UniRef50_Q97BN1 Cluster: 50S ribosomal protein L11P; n=4;
Euryarchaeota|Rep: 50S ribosomal protein L11P -
Thermoplasma volcanium
Length = 158
Score = 64.5 bits (150), Expect = 2e-09
Identities = 40/137 (29%), Positives = 75/137 (54%), Gaps = 4/137 (2%)
Frame = +3
Query: 174 GGEVGATSSLAPKIGPLGLSPKKVGDDIAKATSDWKGLKITVQLTV---QNRQAQIAV-V 341
GG+ + P +GPLGL+ +V +I + T +++G+++ V +TV + ++ +I V V
Sbjct: 11 GGKATTGPPIGPALGPLGLNVAQVVKEINEKTKEFQGMQVPVTVTVIDPETKKYEITVGV 70
Query: 342 PSAAALIIRALKEPPRDRKKQKNIKHNGNISLEXVVGIAKIMRNRSMARYLSGSXKEILG 521
P +AL+ + L KK++ + GN +LE + +A +A+ L + E+LG
Sbjct: 71 PPTSALLKKELGLEKGASKKKEAVA--GNATLEQIKNVAIKKMPSMLAKDLKSAVLEVLG 128
Query: 522 TAQSVGCTVEGXPPHDL 572
T ++G VEG P ++
Sbjct: 129 TCVAMGINVEGKDPKEV 145
>UniRef50_P62446 Cluster: 50S ribosomal protein L11P; n=1;
Nanoarchaeum equitans|Rep: 50S ribosomal protein L11P -
Nanoarchaeum equitans
Length = 160
Score = 62.5 bits (145), Expect = 7e-09
Identities = 40/143 (27%), Positives = 75/143 (52%), Gaps = 4/143 (2%)
Frame = +3
Query: 156 VNLRCVGGEVGATSSLAPKIGPLGLSPKKVGDDIAKATSDWKGLKITVQLTV--QNRQAQ 329
+ L GG+ + P + P ++P KV +I K T +++GL + V++ + + ++ +
Sbjct: 6 IRLLVTGGKATPGPPIGPALSPFKINPGKVVAEINKLTKEYEGLPVPVEIIINPETKEYK 65
Query: 330 IAV-VPSAAALIIRALKEPPRDRKKQKNIKH-NGNISLEXVVGIAKIMRNRSMARYLSGS 503
I V +P +AL+++A R Q+ + GN+S++ VV IAK + L +
Sbjct: 66 IIVGLPPTSALLMKAAGVT---RGPQRTVHEWVGNVSMKDVVEIAKKKIDSMPTSSLKAA 122
Query: 504 XKEILGTAQSVGCTVEGXPPHDL 572
K +LGTA++ G VE P ++
Sbjct: 123 VKSVLGTARATGIKVENKDPKEV 145
>UniRef50_A2AB20 Cluster: Kinesin family member C1; n=3;
Catarrhini|Rep: Kinesin family member C1 - Homo sapiens
(Human)
Length = 203
Score = 53.6 bits (123), Expect = 3e-06
Identities = 22/34 (64%), Positives = 22/34 (64%)
Frame = -3
Query: 282 PSSHLWPWQCHHPPF*ETDQEDRF*GPKMMWHRL 181
PSSH PWQCHH PF ETD R GP WHRL
Sbjct: 85 PSSHPLPWQCHHQPFLETDPGGRSWGPGQKWHRL 118
>UniRef50_Q8FSA7 Cluster: 50S ribosomal protein L11; n=616; cellular
organisms|Rep: 50S ribosomal protein L11 -
Corynebacterium efficiens
Length = 144
Score = 47.6 bits (108), Expect = 2e-04
Identities = 35/139 (25%), Positives = 68/139 (48%), Gaps = 5/139 (3%)
Frame = +3
Query: 153 IVNLRCVGGEVGATSSLAPKIGPLGLSPKKVGDDIAKATSDWKGLKITVQLTV-QNRQAQ 329
++ L+ G+ + P +G G++ + AT + +G + V++TV ++R
Sbjct: 11 LIKLQIQAGQANPAPPVGPALGAHGVNIMEFCKAYNAATENQRGNVVPVEITVYEDRSFD 70
Query: 330 IAV-VPSAAALIIRALKEPPRDRKKQKNIKHN---GNISLEXVVGIAKIMRNRSMARYLS 497
+ P AA L+++A +K + H G ++++ + IA+ + AR +
Sbjct: 71 FKLKTPPAAKLLLKAA-----GLQKGSGVPHTNKVGKVTMDQIREIAETKKEDLNARDID 125
Query: 498 GSXKEILGTAQSVGCTVEG 554
+ K I GTA+S+G TVEG
Sbjct: 126 AAAKIIAGTARSMGITVEG 144
>UniRef50_P05969 Cluster: 50S ribosomal protein L11P; n=7;
Halobacteriaceae|Rep: 50S ribosomal protein L11P -
Halobacterium salinarium (Halobacterium halobium)
Length = 163
Score = 44.4 bits (100), Expect = 0.002
Identities = 34/135 (25%), Positives = 63/135 (46%), Gaps = 2/135 (1%)
Frame = +3
Query: 156 VNLRCVGGEVGATSSLAPKIGPLGLSPKKVGDDIAKATSDWKGLKITVQLTVQNRQA-QI 332
+ + GG+ L P++GP + + V +I T + G ++ V + ++ + I
Sbjct: 5 IEVLVAGGQADPGPPLGPELGPTPVDVQAVVQEINDQTEAFDGTEVPVTIEYEDDGSFSI 64
Query: 333 AV-VPSAAALIIRALKEPPRDRKKQKNIKHNGNISLEXVVGIAKIMRNRSMARYLSGSXK 509
V VP AAL+ + Q+N ++S+E + IA+ + +A + K
Sbjct: 65 EVGVPPTAALVKDEAGFDTGSGEPQENFV--ADLSIEQLKTIAEQKKPDLLAYDARNAAK 122
Query: 510 EILGTAQSVGCTVEG 554
E+ GT S+G T+EG
Sbjct: 123 EVAGTCASLGVTIEG 137
>UniRef50_Q2S1Q1 Cluster: 50S ribosomal protein L11; n=3;
Bacteria|Rep: 50S ribosomal protein L11 - Salinibacter
ruber (strain DSM 13855)
Length = 146
Score = 44.0 bits (99), Expect = 0.003
Identities = 31/138 (22%), Positives = 56/138 (40%)
Frame = +3
Query: 156 VNLRCVGGEVGATSSLAPKIGPLGLSPKKVGDDIAKATSDWKGLKITVQLTVQNRQAQIA 335
+ L+ GG+ + P +G G++ + T D G + V++TV ++
Sbjct: 9 IKLQIKGGQANPAPPIGPALGQHGVNIMEFCKAFNSRTEDRMGTLLPVEITVYADRSFDF 68
Query: 336 VVPSAAALIIRALKEPPRDRKKQKNIKHNGNISLEXVVGIAKIMRNRSMARYLSGSXKEI 515
+V S A ++ K G ++ + + IA A + +
Sbjct: 69 IVKSPPASVLLKQKADIETAAGDPLRDDAGTVTWDDCLDIADQKLQDLNAHTVEKGASMV 128
Query: 516 LGTAQSVGCTVEGXPPHD 569
GTA+S+G TVEG P H+
Sbjct: 129 AGTARSMGITVEGKPAHE 146
>UniRef50_O83265 Cluster: 50S ribosomal protein L11; n=5;
Bacteria|Rep: 50S ribosomal protein L11 - Treponema
pallidum
Length = 146
Score = 42.7 bits (96), Expect = 0.006
Identities = 40/137 (29%), Positives = 68/137 (49%), Gaps = 5/137 (3%)
Frame = +3
Query: 156 VNLRCVGGEVGATSSLAPKIGPLGLS-PKKVGDDIAKATSDWKGLKITVQLTVQNRQAQI 332
+ L+C G+ + P +GP G+S P+ V + S GL + V +TV + ++
Sbjct: 11 IKLQCPAGKATPAPPVGPALGPHGVSAPQFVQQFNDRTKSMEPGLVVPVVVTVYSDKSFS 70
Query: 333 AVV--PSAAALIIRA--LKEPPRDRKKQKNIKHNGNISLEXVVGIAKIMRNRSMARYLSG 500
V+ P AA LI +A +++ + KQK + +SL + IA++ A L
Sbjct: 71 FVLKTPPAAVLIRKACGIEKGSTNSVKQKVAR----LSLAQLTEIAQVKLPDMSALTLDA 126
Query: 501 SXKEILGTAQSVGCTVE 551
+ + I GTA+S+G VE
Sbjct: 127 AKRIIAGTARSMGVEVE 143
>UniRef50_Q7VRP3 Cluster: 50S ribosomal protein L11; n=4;
Bacteria|Rep: 50S ribosomal protein L11 - Blochmannia
floridanus
Length = 146
Score = 41.5 bits (93), Expect = 0.014
Identities = 31/119 (26%), Positives = 55/119 (46%), Gaps = 2/119 (1%)
Frame = +3
Query: 201 LAPKIGPLGLSPKKVGDDIAKATSDWK-GLKITVQLTVQ-NRQAQIAVVPSAAALIIRAL 374
+ P +G G++ K D T+D++ GL + V +TV +R + A +++
Sbjct: 26 IGPALGQQGINIMKFCKDFNTRTADFEMGLILPVVITVYVDRSFSFVIKTPTAVFLLKKA 85
Query: 375 KEPPRDRKKQKNIKHNGNISLEXVVGIAKIMRNRSMARYLSGSXKEILGTAQSVGCTVE 551
+K K + G + + + IAKI + L + K I+GTA+S+G VE
Sbjct: 86 AGIKSGSEKPKCVSV-GKVLISQIYEIAKIKLIDMTSLNLESASKSIMGTARSIGLEVE 143
>UniRef50_Q9PA82 Cluster: 50S ribosomal protein L11; n=13;
Proteobacteria|Rep: 50S ribosomal protein L11 - Xylella
fastidiosa
Length = 142
Score = 38.3 bits (85), Expect = 0.13
Identities = 32/137 (23%), Positives = 58/137 (42%), Gaps = 1/137 (0%)
Frame = +3
Query: 147 IKIVNLRCVGGEVGATSSLAPKIGPLGLSPKKVGDDIAKATSDWK-GLKITVQLTVQNRQ 323
I + L+ G+ + + P +G GL+ AT + GL I V +T + +
Sbjct: 6 IAYIKLQVKAGQASPSPPVGPALGQRGLNIMDFCKAFNAATQKVEQGLPIPVVITAYSDR 65
Query: 324 AQIAVVPSAAALIIRALKEPPRDRKKQKNIKHNGNISLEXVVGIAKIMRNRSMARYLSGS 503
+ + A I+ + K+ N + G ++ + + IAK A L +
Sbjct: 66 TFTFITKTPPASILLKKIVGIQSGSKRPNTEKVGKVTRKQLEDIAKTKELDMTAADLDAA 125
Query: 504 XKEILGTAQSVGCTVEG 554
+ I G+A+S+G VEG
Sbjct: 126 VRTIAGSARSMGLVVEG 142
>UniRef50_Q2J5H8 Cluster: Ribosomal protein L11; n=1; Frankia sp.
CcI3|Rep: Ribosomal protein L11 - Frankia sp. (strain
CcI3)
Length = 165
Score = 37.5 bits (83), Expect = 0.23
Identities = 28/136 (20%), Positives = 69/136 (50%), Gaps = 2/136 (1%)
Frame = +3
Query: 153 IVNLRCVGGEVGATSSLAPKIGPLGLSPKKVGDDIAKATSDWKGLKITVQLTV-QNRQAQ 329
+V ++ GG + + +G G++ V + +A++ GL+++ +++ ++R +
Sbjct: 33 VVRIQQEGGNANV-AKIGQALGTYGVNIVGVMKEFNEASAIHHGLQVSADVSIFEDRSFE 91
Query: 330 IAVV-PSAAALIIRALKEPPRDRKKQKNIKHNGNISLEXVVGIAKIMRNRSMARYLSGSX 506
++V P+ +L+++A R + + +H G +++ + IAK+ + +
Sbjct: 92 LSVKSPATTSLLLQAAGV--RKGSPRPHAEHAGAVTVSQLREIAKVKLPDLNVDSMEAAE 149
Query: 507 KEILGTAQSVGCTVEG 554
K + GTA+S+G V G
Sbjct: 150 KIVAGTARSMGIKVTG 165
>UniRef50_A3B9H4 Cluster: Putative uncharacterized protein; n=3;
Oryza sativa|Rep: Putative uncharacterized protein -
Oryza sativa subsp. japonica (Rice)
Length = 260
Score = 37.5 bits (83), Expect = 0.23
Identities = 33/92 (35%), Positives = 45/92 (48%), Gaps = 11/92 (11%)
Frame = +3
Query: 156 VNLRCVGGEVGATSSLAPKIGPLGL-----SPKKVGDD-----IAKATSDWKGLKITVQL 305
V L C GGEVG+ S A + P + K VG+ +A W+ +
Sbjct: 98 VPLPCTGGEVGSKSEPAAAVAPAVIVDVKEEEKSVGNGGGGGGAQEAARWWRAGGADGGV 157
Query: 306 TVQNRQ-AQIAVVPSAAALIIRALKEPPRDRK 398
TVQ R+ A++AV P A A +RAL+ PPR K
Sbjct: 158 TVQPRERARVAVQP-ADARRLRALRAPPRQGK 188
>UniRef50_Q16XA5 Cluster: Putative uncharacterized protein; n=1;
Aedes aegypti|Rep: Putative uncharacterized protein -
Aedes aegypti (Yellowfever mosquito)
Length = 719
Score = 36.7 bits (81), Expect = 0.40
Identities = 14/54 (25%), Positives = 31/54 (57%)
Frame = -1
Query: 431 DVAVVFDIFLLFTVTGRLLKGSDDKGCCRGNNSYLGLSVLNCQLHSDLETLPVT 270
++++ + +F LF T + + +D C G S++ L +++ +HS + T+P T
Sbjct: 288 ELSLYYKLFTLFKTTPKSEEKTDTMDCINGIRSFMMLQIISHHVHSAIRTIPTT 341
>UniRef50_Q21QS4 Cluster: Major facilitator superfamily MFS_1; n=1;
Rhodoferax ferrireducens T118|Rep: Major facilitator
superfamily MFS_1 - Rhodoferax ferrireducens (strain DSM
15236 / ATCC BAA-621 / T118)
Length = 381
Score = 35.9 bits (79), Expect = 0.70
Identities = 24/81 (29%), Positives = 36/81 (44%), Gaps = 2/81 (2%)
Frame = -2
Query: 484 AIDLFLMIFAMPTTXSREMLPLCLIFFCFLRSRGGSLRALMIRAAAEGT--TAIWACLF* 311
A LM+ P+T +L L +F C G A + R A +GT TA CLF
Sbjct: 277 AASSILMVMLQPSTSPALVLTLVCVFGCTAIGWNGVYLAAVARQAPQGTAGTATAGCLFF 336
Query: 310 TVSCTVILRPFQSLVALAMSS 248
T V+ P +++ A+ +
Sbjct: 337 TYIGVVVSAPLFGVLSTALGN 357
>UniRef50_Q9VGN4 Cluster: CG31374-PB, isoform B; n=4;
Sophophora|Rep: CG31374-PB, isoform B - Drosophila
melanogaster (Fruit fly)
Length = 935
Score = 33.9 bits (74), Expect = 2.8
Identities = 20/67 (29%), Positives = 35/67 (52%)
Frame = +3
Query: 231 SPKKVGDDIAKATSDWKGLKITVQLTVQNRQAQIAVVPSAAALIIRALKEPPRDRKKQKN 410
SP ++ DDI K D + K + L ++NR+AQ A I E R++ ++KN
Sbjct: 536 SPDEL-DDIDKIRDDLQSTKQMLALELRNREAQDRENKKLLAKIRTLETELEREKSREKN 594
Query: 411 IKHNGNI 431
+++ N+
Sbjct: 595 LEYGSNV 601
>UniRef50_UPI00006615FB Cluster: Homolog of Homo sapiens "Splice
Isoform 2 of Nesprin 2; n=1; Takifugu rubripes|Rep:
Homolog of Homo sapiens "Splice Isoform 2 of Nesprin 2 -
Takifugu rubripes
Length = 4795
Score = 32.7 bits (71), Expect = 6.5
Identities = 30/110 (27%), Positives = 46/110 (41%), Gaps = 3/110 (2%)
Frame = +3
Query: 165 RCVGGEVGATSSLAPKIGPLGLSPKKVGDDIAKATSDWKGLKITVQLTVQNRQAQIAVVP 344
R G+V S +GP+ + P+ ++ S GL +T L +N+ A+++
Sbjct: 2236 RSKNGQVSIISETVQHLGPVNVEPQPSKKEVNSQNSSNTGLAVTAALVEENK-AKLSPTQ 2294
Query: 345 SAAALIIRALKEPPRDRKK--QKNIKHNG-NISLEXVVGIAKIMRNRSMA 485
+ + K PP K K IK G SLE G +R RS A
Sbjct: 2295 RKS----KGPKHPPEPATKGNGKAIKEAGRQQSLEKTEGKLTPLRRRSKA 2340
>UniRef50_Q1ZDC0 Cluster: Putative uncharacterized protein; n=1;
Psychromonas sp. CNPT3|Rep: Putative uncharacterized
protein - Psychromonas sp. CNPT3
Length = 160
Score = 32.3 bits (70), Expect = 8.6
Identities = 19/63 (30%), Positives = 34/63 (53%)
Frame = +3
Query: 291 ITVQLTVQNRQAQIAVVPSAAALIIRALKEPPRDRKKQKNIKHNGNISLEXVVGIAKIMR 470
+ V +T + R+ + P +AAL RALK D ++ HN N+++ V I++ +
Sbjct: 62 VMVPITFKAREGALGRHPPSAALTFRALKPGDPDIERPMIYDHNRNVNITKKVEISESL- 120
Query: 471 NRS 479
N+S
Sbjct: 121 NKS 123
>UniRef50_Q89W61 Cluster: 30S ribosomal protein S20; n=12;
Alphaproteobacteria|Rep: 30S ribosomal protein S20 -
Bradyrhizobium japonicum
Length = 88
Score = 32.3 bits (70), Expect = 8.6
Identities = 23/68 (33%), Positives = 32/68 (47%)
Frame = +3
Query: 231 SPKKVGDDIAKATSDWKGLKITVQLTVQNRQAQIAVVPSAAALIIRALKEPPRDRKKQKN 410
S KK IA+ T+ K + ++ V+N + I AAA+ A EP R Q+N
Sbjct: 6 SAKKATRKIARRTAVNKSRRTQMRGAVRNVEEAIKTGDRAAAVKALANAEPALMRAAQRN 65
Query: 411 IKHNGNIS 434
I H N S
Sbjct: 66 IIHKNNAS 73
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 608,398,134
Number of Sequences: 1657284
Number of extensions: 11963492
Number of successful extensions: 30129
Number of sequences better than 10.0: 40
Number of HSP's better than 10.0 without gapping: 29271
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 30110
length of database: 575,637,011
effective HSP length: 96
effective length of database: 416,537,747
effective search space used: 40404161459
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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