Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP02_F_L05
(581 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P48159 Cluster: 60S ribosomal protein L23; n=39; cellul... 180 3e-44
UniRef50_P62829 Cluster: 60S ribosomal protein L23; n=156; cellu... 173 2e-42
UniRef50_Q8SRA7 Cluster: 60S ribosomal protein L23; n=3; Eukaryo... 125 9e-28
UniRef50_Q8ZTR0 Cluster: 50S ribosomal protein L14P; n=10; Therm... 104 2e-21
UniRef50_O59427 Cluster: 50S ribosomal protein L14P; n=7; Archae... 103 3e-21
UniRef50_A0RVY3 Cluster: Ribosomal protein L14; n=2; Thermoprote... 101 1e-20
UniRef50_Q8PV40 Cluster: 50S ribosomal protein L14P; n=36; Archa... 101 1e-20
UniRef50_A7DSY4 Cluster: Putative uncharacterized protein; n=1; ... 70 5e-11
UniRef50_Q9UX96 Cluster: Putative uncharacterized protein ORF-c1... 69 8e-11
UniRef50_O46904 Cluster: Chloroplast 50S ribosomal protein L14; ... 65 1e-09
UniRef50_Q9RXJ2 Cluster: 50S ribosomal protein L14; n=113; cellu... 64 2e-09
UniRef50_Q39KF7 Cluster: 50S ribosomal protein L14; n=109; cellu... 61 2e-08
UniRef50_Q9XD26 Cluster: 50S ribosomal protein L14; n=407; cellu... 60 3e-08
UniRef50_P0A473 Cluster: 50S ribosomal protein L14; n=69; cellul... 58 2e-07
UniRef50_Q5KJU6 Cluster: Mitochondrial 60s ribosomal protein l38... 57 3e-07
UniRef50_P56792 Cluster: Chloroplast 50S ribosomal protein L14; ... 57 3e-07
UniRef50_Q676X9 Cluster: HUELLENLOS-like protein; n=1; Hyacinthu... 55 1e-06
UniRef50_A7IFZ1 Cluster: Ribosomal protein L14; n=1; Xanthobacte... 50 3e-05
UniRef50_A5K9G7 Cluster: 50S ribosomal subunit protein L14, puta... 50 4e-05
UniRef50_Q7RBS4 Cluster: LSU ribosomal protein L14P; n=4; Aconoi... 49 9e-05
UniRef50_Q9G8Q2 Cluster: Ribosomal protein L14; n=1; Naegleria g... 48 1e-04
UniRef50_Q2KL07 Cluster: Ribosomal protein L23; n=3; Eukaryota|R... 48 2e-04
UniRef50_A0IXJ1 Cluster: Ribosomal protein L14b/L23e precursor; ... 47 3e-04
UniRef50_A3U7M5 Cluster: 50S ribosomal protein L14; n=1; Croceib... 46 7e-04
UniRef50_Q00UK0 Cluster: Ribosomal protein L23; n=1; Ostreococcu... 44 0.002
UniRef50_A6SDC7 Cluster: 50S ribosomal protein L14; n=7; Pezizom... 43 0.005
UniRef50_UPI0000D9F818 Cluster: PREDICTED: similar to 60S riboso... 42 0.008
UniRef50_A0NWH4 Cluster: 50S ribosomal protein L14; n=2; Bacteri... 42 0.008
UniRef50_Q3S293 Cluster: Ribosomal protein L14; n=1; Thalassiosi... 42 0.008
UniRef50_O21033 Cluster: Mitochondrial 60S ribosomal protein L14... 42 0.011
UniRef50_Q9G8W6 Cluster: Ribosomal protein L14; n=1; Rhodomonas ... 39 0.075
UniRef50_P15767 Cluster: Mitochondrial 60S ribosomal protein L14... 37 0.30
UniRef50_Q9G8Z6 Cluster: Ribosomal protein L14; n=1; Ochromonas ... 36 0.53
UniRef50_Q9TCB2 Cluster: Ribosomal protein L14; n=1; Nephroselmi... 36 0.70
UniRef50_A4C2U8 Cluster: Putative uncharacterized protein; n=2; ... 35 1.2
UniRef50_Q9TAK1 Cluster: Ribosomal protein L14; n=1; Cafeteria r... 35 1.2
UniRef50_Q9LNP8 Cluster: F1L3.27; n=14; Magnoliophyta|Rep: F1L3.... 35 1.6
UniRef50_Q9ZZN9 Cluster: 50S ribosomal protein L14; n=1; Cyanidi... 34 2.8
UniRef50_UPI000023CF98 Cluster: predicted protein; n=1; Gibberel... 33 3.7
UniRef50_UPI000065FCAE Cluster: MAP/microtubule affinity-regulat... 33 3.7
UniRef50_Q6UVR4 Cluster: Ribosomal protein L14; n=1; Pseudendocl... 33 3.7
UniRef50_A2BGS3 Cluster: Novel protein similar to vertebrate tra... 33 4.9
UniRef50_Q6LCP9 Cluster: Putative uncharacterized protein; n=2; ... 33 4.9
UniRef50_UPI00005882DA Cluster: PREDICTED: hypothetical protein;... 32 8.6
UniRef50_Q11M94 Cluster: Oligopeptide/dipeptide ABC transporter,... 32 8.6
>UniRef50_P48159 Cluster: 60S ribosomal protein L23; n=39; cellular
organisms|Rep: 60S ribosomal protein L23 - Drosophila
melanogaster (Fruit fly)
Length = 140
Score = 180 bits (437), Expect = 3e-44
Identities = 84/87 (96%), Positives = 85/87 (97%)
Frame = +3
Query: 162 IKGRLNRLPAAGSGDMIVATVKKGKPELRKKVMPAVVIRQRKPFRRRDGVFIYFEDNAGV 341
I+GRLNRLPAAG GDM VATVKKGKPELRKKVMPAVVIRQRKPFRRRDGVFIYFEDNAGV
Sbjct: 45 IRGRLNRLPAAGVGDMFVATVKKGKPELRKKVMPAVVIRQRKPFRRRDGVFIYFEDNAGV 104
Query: 342 IVNNKGEMKGSAITGPVAKECADLWPR 422
IVNNKGEMKGSAITGPVAKECADLWPR
Sbjct: 105 IVNNKGEMKGSAITGPVAKECADLWPR 131
Score = 46.8 bits (106), Expect = 4e-04
Identities = 20/23 (86%), Positives = 22/23 (95%)
Frame = +2
Query: 92 LGAVINCADNTGAKNLYVIAVQG 160
+GAV+NCADNTGAKNLYVIAV G
Sbjct: 22 VGAVMNCADNTGAKNLYVIAVHG 44
Score = 46.4 bits (105), Expect = 5e-04
Identities = 20/24 (83%), Positives = 22/24 (91%)
Frame = +1
Query: 28 MSKRGRGGSAGAKFRISLGLPAGS 99
MSKRGRGG+AG KFRISLGLP G+
Sbjct: 1 MSKRGRGGTAGGKFRISLGLPVGA 24
>UniRef50_P62829 Cluster: 60S ribosomal protein L23; n=156; cellular
organisms|Rep: 60S ribosomal protein L23 - Homo sapiens
(Human)
Length = 140
Score = 173 bits (422), Expect = 2e-42
Identities = 80/89 (89%), Positives = 85/89 (95%)
Frame = +3
Query: 156 KAIKGRLNRLPAAGSGDMIVATVKKGKPELRKKVMPAVVIRQRKPFRRRDGVFIYFEDNA 335
K IKGRLNRLPAAG GDM++ATVKKGKPELRKKV PAVVIRQRK +RR+DGVF+YFEDNA
Sbjct: 43 KGIKGRLNRLPAAGVGDMVMATVKKGKPELRKKVHPAVVIRQRKSYRRKDGVFLYFEDNA 102
Query: 336 GVIVNNKGEMKGSAITGPVAKECADLWPR 422
GVIVNNKGEMKGSAITGPVAKECADLWPR
Sbjct: 103 GVIVNNKGEMKGSAITGPVAKECADLWPR 131
Score = 48.0 bits (109), Expect = 2e-04
Identities = 21/24 (87%), Positives = 23/24 (95%)
Frame = +1
Query: 28 MSKRGRGGSAGAKFRISLGLPAGS 99
MSKRGRGGS+GAKFRISLGLP G+
Sbjct: 1 MSKRGRGGSSGAKFRISLGLPVGA 24
Score = 46.8 bits (106), Expect = 4e-04
Identities = 19/23 (82%), Positives = 23/23 (100%)
Frame = +2
Query: 92 LGAVINCADNTGAKNLYVIAVQG 160
+GAVINCADNTGAKNLY+I+V+G
Sbjct: 22 VGAVINCADNTGAKNLYIISVKG 44
>UniRef50_Q8SRA7 Cluster: 60S ribosomal protein L23; n=3;
Eukaryota|Rep: 60S ribosomal protein L23 -
Encephalitozoon cuniculi
Length = 146
Score = 125 bits (301), Expect = 9e-28
Identities = 56/89 (62%), Positives = 71/89 (79%)
Frame = +3
Query: 156 KAIKGRLNRLPAAGSGDMIVATVKKGKPELRKKVMPAVVIRQRKPFRRRDGVFIYFEDNA 335
K +GRLNRLPAA GD+ V +VKKGKPELRKKV A++IRQ+K +RR DG I FEDNA
Sbjct: 49 KRYRGRLNRLPAAAPGDICVVSVKKGKPELRKKVHYAILIRQKKIWRRTDGSHIMFEDNA 108
Query: 336 GVIVNNKGEMKGSAITGPVAKECADLWPR 422
V++NNKGE++G+ I GPV +E AD+WP+
Sbjct: 109 AVLINNKGELRGAQIAGPVPREVADMWPK 137
>UniRef50_Q8ZTR0 Cluster: 50S ribosomal protein L14P; n=10;
Thermoprotei|Rep: 50S ribosomal protein L14P -
Pyrobaculum aerophilum
Length = 144
Score = 104 bits (249), Expect = 2e-21
Identities = 46/80 (57%), Positives = 60/80 (75%)
Frame = +3
Query: 180 RLPAAGSGDMIVATVKKGKPELRKKVMPAVVIRQRKPFRRRDGVFIYFEDNAGVIVNNKG 359
R+P AG GDM+V V++GKPELRK++ A+V+RQR+P+RR DG ++ FEDNA VIV +G
Sbjct: 55 RIPGAGVGDMVVVVVREGKPELRKQIFRAIVVRQRRPYRRPDGTWVAFEDNAVVIVTPEG 114
Query: 360 EMKGSAITGPVAKECADLWP 419
+ KGS I GPVA E WP
Sbjct: 115 DPKGSEIHGPVAMEATLRWP 134
>UniRef50_O59427 Cluster: 50S ribosomal protein L14P; n=7;
Archaea|Rep: 50S ribosomal protein L14P - Pyrococcus
horikoshii
Length = 141
Score = 103 bits (247), Expect = 3e-21
Identities = 48/85 (56%), Positives = 64/85 (75%)
Frame = +3
Query: 168 GRLNRLPAAGSGDMIVATVKKGKPELRKKVMPAVVIRQRKPFRRRDGVFIYFEDNAGVIV 347
G RL +AG GDM+VATVKKG+P++R +V+ AV+IRQRK +RR DG+ + FEDNA VIV
Sbjct: 48 GTRRRLASAGVGDMVVATVKKGRPDMRHQVVRAVIIRQRKEYRRLDGMRVKFEDNAAVIV 107
Query: 348 NNKGEMKGSAITGPVAKECADLWPR 422
+G +G+ I GPVA+E A+ W R
Sbjct: 108 TPEGVPRGTEIRGPVAREAAEKWVR 132
>UniRef50_A0RVY3 Cluster: Ribosomal protein L14; n=2;
Thermoprotei|Rep: Ribosomal protein L14 - Cenarchaeum
symbiosum
Length = 144
Score = 101 bits (242), Expect = 1e-20
Identities = 50/105 (47%), Positives = 67/105 (63%)
Frame = +3
Query: 108 TAPTTQGQRICM*SLSKAIKGRLNRLPAAGSGDMIVATVKKGKPELRKKVMPAVVIRQRK 287
T G ++ + + K R++RLPAA GD + VKKG ELRK+V AV+IRQ+
Sbjct: 31 TCADNSGAKVLEIIMVQKAKTRVSRLPAAAVGDYVNVVVKKGPAELRKQVHGAVIIRQKY 90
Query: 288 PFRRRDGVFIYFEDNAGVIVNNKGEMKGSAITGPVAKECADLWPR 422
P RR +GV + FEDNA V+ +GEMKG+ I GPVA E ++ WPR
Sbjct: 91 PVRRLNGVRVAFEDNAAVLTTPEGEMKGTDIKGPVAAEASEKWPR 135
>UniRef50_Q8PV40 Cluster: 50S ribosomal protein L14P; n=36;
Archaea|Rep: 50S ribosomal protein L14P - Methanosarcina
mazei (Methanosarcina frisia)
Length = 132
Score = 101 bits (242), Expect = 1e-20
Identities = 47/89 (52%), Positives = 65/89 (73%)
Frame = +3
Query: 156 KAIKGRLNRLPAAGSGDMIVATVKKGKPELRKKVMPAVVIRQRKPFRRRDGVFIYFEDNA 335
K +G NR+P AG GDM V +VKKG PE+RK+++ AVV+RQ++ FRR DG+ + FEDNA
Sbjct: 35 KKYRGVKNRMPCAGIGDMCVVSVKKGTPEMRKQILLAVVVRQKQEFRRPDGLHVSFEDNA 94
Query: 336 GVIVNNKGEMKGSAITGPVAKECADLWPR 422
VI + G KG+ I GPVA+E A+ +P+
Sbjct: 95 MVITDEDGIPKGTDIKGPVAREVAERFPK 123
>UniRef50_A7DSY4 Cluster: Putative uncharacterized protein; n=1;
Candidatus Nitrosopumilus maritimus SCM1|Rep: Putative
uncharacterized protein - Candidatus Nitrosopumilus
maritimus SCM1
Length = 148
Score = 69.7 bits (163), Expect = 5e-11
Identities = 39/83 (46%), Positives = 47/83 (56%)
Frame = -2
Query: 427 AIRGHRSAHSLATGPVMAEPFISPLLLTMTPALSSKYINTPSRLLNGFRCLMTTAGITFF 248
A GH S S ATGP+M+ PF+SP + T ALSSK TP L G+ CL+ TA T F
Sbjct: 14 ATLGHFSEASAATGPLMSVPFVSPSGVINTAALSSKQTLTPFNLRTGYFCLIITAPYTCF 73
Query: 247 RSSGLPFLTVATIMSPEPAAGSL 179
+S PF T SP A G+L
Sbjct: 74 LNSAGPFFTTTLQKSPTDAEGNL 96
>UniRef50_Q9UX96 Cluster: Putative uncharacterized protein
ORF-c10_023; n=2; Archaea|Rep: Putative uncharacterized
protein ORF-c10_023 - Sulfolobus solfataricus
Length = 107
Score = 68.9 bits (161), Expect = 8e-11
Identities = 42/88 (47%), Positives = 51/88 (57%)
Frame = -2
Query: 427 AIRGHRSAHSLATGPVMAEPFISPLLLTMTPALSSKYINTPSRLLNGFRCLMTTAGITFF 248
AI GH SA SLA GP+ + PF P +T ALSSK I+ PS LL G CL TA F
Sbjct: 20 AIFGHLSAASLAIGPLTSVPFGVPSGFIITTALSSKEIHVPSGLLYGILCLTITALNFCF 79
Query: 247 RSSGLPFLTVATIMSPEPAAGSLFRRPL 164
+SG+PFL +S A G+L + PL
Sbjct: 80 LTSGVPFLIDTITISAMLANGTLLKTPL 107
>UniRef50_O46904 Cluster: Chloroplast 50S ribosomal protein L14;
n=64; cellular organisms|Rep: Chloroplast 50S ribosomal
protein L14 - Guillardia theta (Cryptomonas phi)
Length = 121
Score = 65.3 bits (152), Expect = 1e-09
Identities = 30/76 (39%), Positives = 47/76 (61%), Gaps = 3/76 (3%)
Frame = +3
Query: 192 AGSGDMIVATVKKGKPEL---RKKVMPAVVIRQRKPFRRRDGVFIYFEDNAGVIVNNKGE 362
A GD+I+ VK P + R V+ AV++R + RR+DG+ I F+DNA VI+N +
Sbjct: 32 ASIGDVIIGVVKDATPNMPVKRSDVVRAVIMRTKNTIRRKDGMSIRFDDNAAVIINKENN 91
Query: 363 MKGSAITGPVAKECAD 410
+G+ + GP+A+E D
Sbjct: 92 PRGTRVFGPIARELRD 107
>UniRef50_Q9RXJ2 Cluster: 50S ribosomal protein L14; n=113; cellular
organisms|Rep: 50S ribosomal protein L14 - Deinococcus
radiodurans
Length = 134
Score = 64.1 bits (149), Expect = 2e-09
Identities = 34/73 (46%), Positives = 46/73 (63%), Gaps = 3/73 (4%)
Frame = +3
Query: 201 GDMIVATVKKGKPELRKK---VMPAVVIRQRKPFRRRDGVFIYFEDNAGVIVNNKGEMKG 371
GD+IVA+VK P K V+ AVV+R +R DG I F+ NA VI+NN+GE +G
Sbjct: 48 GDIIVASVKDAAPRGAVKAGDVVKAVVVRTSHAIKRADGSTIRFDRNAAVIINNQGEPRG 107
Query: 372 SAITGPVAKECAD 410
+ + GPVA+E D
Sbjct: 108 TRVFGPVARELRD 120
>UniRef50_Q39KF7 Cluster: 50S ribosomal protein L14; n=109; cellular
organisms|Rep: 50S ribosomal protein L14 - Burkholderia
sp. (strain 383) (Burkholderia cepacia (strain ATCC
17760/ NCIB 9086 / R18194))
Length = 122
Score = 60.9 bits (141), Expect = 2e-08
Identities = 34/73 (46%), Positives = 45/73 (61%), Gaps = 3/73 (4%)
Frame = +3
Query: 192 AGSGDMIVATVKKGKPELRKK---VMPAVVIRQRKPFRRRDGVFIYFEDNAGVIVNNKGE 362
AG GD+I +VK+ P R K + AVV+R K RR+DG I F+ NA V++NNK E
Sbjct: 33 AGIGDIIKVSVKEATPRGRVKKGEIYNAVVVRTAKGVRRQDGSLIKFDGNAAVLLNNKLE 92
Query: 363 MKGSAITGPVAKE 401
G+ I GPV +E
Sbjct: 93 PIGTRIFGPVTRE 105
>UniRef50_Q9XD26 Cluster: 50S ribosomal protein L14; n=407; cellular
organisms|Rep: 50S ribosomal protein L14 - Leptospira
interrogans
Length = 130
Score = 60.5 bits (140), Expect = 3e-08
Identities = 30/60 (50%), Positives = 38/60 (63%)
Frame = +3
Query: 231 GKPELRKKVMPAVVIRQRKPFRRRDGVFIYFEDNAGVIVNNKGEMKGSAITGPVAKECAD 410
GK K V AVV+R K RR DG +I F+DNA I+++KG KG+ I GPVA+E D
Sbjct: 57 GKKVHNKAVQRAVVVRTTKEIRRPDGSYIRFDDNACAIIDDKGNPKGTRIFGPVARELRD 116
>UniRef50_P0A473 Cluster: 50S ribosomal protein L14; n=69; cellular
organisms|Rep: 50S ribosomal protein L14 - Streptococcus
pneumoniae
Length = 122
Score = 57.6 bits (133), Expect = 2e-07
Identities = 31/73 (42%), Positives = 47/73 (64%), Gaps = 3/73 (4%)
Frame = +3
Query: 192 AGSGDMIVATVKKGKP--ELRK-KVMPAVVIRQRKPFRRRDGVFIYFEDNAGVIVNNKGE 362
A GD+IVA+VK+ P ++K V+ AV++R + RR DG +I F++NA VI+
Sbjct: 33 ANIGDVIVASVKQATPGGAVKKGDVVKAVIVRTKSGARRADGSYIKFDENAAVIIREDKT 92
Query: 363 MKGSAITGPVAKE 401
+G+ I GPVA+E
Sbjct: 93 PRGTRIFGPVARE 105
>UniRef50_Q5KJU6 Cluster: Mitochondrial 60s ribosomal protein l38
(Yml38), putative; n=13; Dikarya|Rep: Mitochondrial 60s
ribosomal protein l38 (Yml38), putative - Cryptococcus
neoformans (Filobasidiella neoformans)
Length = 149
Score = 57.2 bits (132), Expect = 3e-07
Identities = 38/98 (38%), Positives = 52/98 (53%), Gaps = 18/98 (18%)
Frame = +3
Query: 162 IKGRLNRLPAAGSGDMIVATVKKGKP-----------------ELRK-KVMPAVVIRQRK 287
+K RL A GD IV V K +P ++RK + AVV+R +K
Sbjct: 27 VKTRLKSTGFATVGDEIVCVVNKARPIPANEVVKNPNASSNIQKIRKGDIRRAVVVRVKK 86
Query: 288 PFRRRDGVFIYFEDNAGVIVNNKGEMKGSAITGPVAKE 401
+R DG + F+D+A V++NNKGEM G+ I GPVA E
Sbjct: 87 TTQRPDGSVVRFDDSAAVLLNNKGEMLGTRIVGPVASE 124
>UniRef50_P56792 Cluster: Chloroplast 50S ribosomal protein L14;
n=151; cellular organisms|Rep: Chloroplast 50S ribosomal
protein L14 - Arabidopsis thaliana (Mouse-ear cress)
Length = 122
Score = 56.8 bits (131), Expect = 3e-07
Identities = 26/74 (35%), Positives = 45/74 (60%), Gaps = 3/74 (4%)
Frame = +3
Query: 201 GDMIVATVKKGKPEL---RKKVMPAVVIRQRKPFRRRDGVFIYFEDNAGVIVNNKGEMKG 371
GD+IVA +K+ P R +V+ AV++R K +R +G I ++DNA V+++ +G KG
Sbjct: 36 GDVIVAVIKEAIPNTPLERSEVIRAVIVRTCKELKRNNGTIIRYDDNAAVVIDQEGNPKG 95
Query: 372 SAITGPVAKECADL 413
+ + G + +E L
Sbjct: 96 TRVFGAIPRELRQL 109
>UniRef50_Q676X9 Cluster: HUELLENLOS-like protein; n=1; Hyacinthus
orientalis|Rep: HUELLENLOS-like protein - Hyacinthus
orientalis (Common hyacinth)
Length = 171
Score = 55.2 bits (127), Expect = 1e-06
Identities = 31/70 (44%), Positives = 44/70 (62%), Gaps = 3/70 (4%)
Frame = +3
Query: 201 GDMIVATVKKGKPELRKK---VMPAVVIRQRKPFRRRDGVFIYFEDNAGVIVNNKGEMKG 371
GD I+A+VK+ +P+ + K V+ VV+R P R DG I F+DNA V+VN +GE G
Sbjct: 85 GDTIIASVKEAQPKGKVKKGDVVYGVVVRAAMPRGRCDGSEIKFDDNAVVLVNKQGEPIG 144
Query: 372 SAITGPVAKE 401
+ + GPV E
Sbjct: 145 TRVFGPVPHE 154
>UniRef50_A7IFZ1 Cluster: Ribosomal protein L14; n=1; Xanthobacter
autotrophicus Py2|Rep: Ribosomal protein L14 -
Xanthobacter sp. (strain Py2)
Length = 144
Score = 50.4 bits (115), Expect = 3e-05
Identities = 28/55 (50%), Positives = 35/55 (63%), Gaps = 3/55 (5%)
Frame = +3
Query: 201 GDMIVATVKKGKPELRKK---VMPAVVIRQRKPFRRRDGVFIYFEDNAGVIVNNK 356
GD+IV +VK+ P R K VM AVV+R K RR DG I F+ NA V++NNK
Sbjct: 36 GDIIVVSVKEAIPRGRVKKGDVMKAVVVRTAKDIRRVDGSVIRFDRNAAVLINNK 90
>UniRef50_A5K9G7 Cluster: 50S ribosomal subunit protein L14,
putative; n=4; Aconoidasida|Rep: 50S ribosomal subunit
protein L14, putative - Plasmodium vivax
Length = 183
Score = 50.0 bits (114), Expect = 4e-05
Identities = 25/69 (36%), Positives = 44/69 (63%), Gaps = 2/69 (2%)
Frame = +3
Query: 201 GDMIVATV--KKGKPELRKKVMPAVVIRQRKPFRRRDGVFIYFEDNAGVIVNNKGEMKGS 374
GD I ++ K +++K +++R++K +R+DG +I F+DNA VI+ +K ++K +
Sbjct: 103 GDRIRVSIRDKTNDCTIQEKTPKGIIVRRKKETKRKDGSYIKFDDNAFVII-SKNKLKAT 161
Query: 375 AITGPVAKE 401
I GPVA E
Sbjct: 162 KIKGPVAME 170
>UniRef50_Q7RBS4 Cluster: LSU ribosomal protein L14P; n=4;
Aconoidasida|Rep: LSU ribosomal protein L14P -
Plasmodium yoelii yoelii
Length = 124
Score = 48.8 bits (111), Expect = 9e-05
Identities = 24/69 (34%), Positives = 44/69 (63%), Gaps = 2/69 (2%)
Frame = +3
Query: 201 GDMIVATVKKGKPE--LRKKVMPAVVIRQRKPFRRRDGVFIYFEDNAGVIVNNKGEMKGS 374
GD I +++ E + +K +++R++K +R+DG +I F+DNA V++ +K ++K +
Sbjct: 44 GDRIRVSIRDKTSECGVSEKTPKGIIVRRKKETKRKDGSYIKFDDNAFVMI-SKNKLKAT 102
Query: 375 AITGPVAKE 401
I GPVA E
Sbjct: 103 KIKGPVAME 111
>UniRef50_Q9G8Q2 Cluster: Ribosomal protein L14; n=1; Naegleria
gruberi|Rep: Ribosomal protein L14 - Naegleria gruberi
Length = 123
Score = 48.4 bits (110), Expect = 1e-04
Identities = 27/88 (30%), Positives = 47/88 (53%), Gaps = 5/88 (5%)
Frame = +3
Query: 153 SKAIKGRLNRLPAAGSGDMIVATVKKGKPELRKKVMP-----AVVIRQRKPFRRRDGVFI 317
++ IK + A GD IV +KK K + KV +++R +K +R +G+++
Sbjct: 19 AECIKVLKKKYQHASVGDYIVVAIKKVKMRKKMKVKMHDVRFGIIVRTKKNIKRYNGIYV 78
Query: 318 YFEDNAGVIVNNKGEMKGSAITGPVAKE 401
FEDNA V+++ G+ I GP++ E
Sbjct: 79 SFEDNAMVLLDKNLNPIGNRINGPLSYE 106
>UniRef50_Q2KL07 Cluster: Ribosomal protein L23; n=3;
Eukaryota|Rep: Ribosomal protein L23 - Siniperca
chuatsi (Chinese perch)
Length = 46
Score = 48.0 bits (109), Expect = 2e-04
Identities = 21/24 (87%), Positives = 23/24 (95%)
Frame = +1
Query: 28 MSKRGRGGSAGAKFRISLGLPAGS 99
MSKRGRGGS+GAKFRISLGLP G+
Sbjct: 10 MSKRGRGGSSGAKFRISLGLPVGA 33
Score = 36.3 bits (80), Expect = 0.53
Identities = 15/16 (93%), Positives = 16/16 (100%)
Frame = +2
Query: 92 LGAVINCADNTGAKNL 139
+GAVINCADNTGAKNL
Sbjct: 31 VGAVINCADNTGAKNL 46
>UniRef50_A0IXJ1 Cluster: Ribosomal protein L14b/L23e precursor;
n=1; Serratia proteamaculans 568|Rep: Ribosomal protein
L14b/L23e precursor - Serratia proteamaculans 568
Length = 119
Score = 47.2 bits (107), Expect = 3e-04
Identities = 25/50 (50%), Positives = 32/50 (64%), Gaps = 1/50 (2%)
Frame = +3
Query: 255 VMPAVVIRQRKPFRRRDGVFIYFEDNAGVIVNNKGEMK-GSAITGPVAKE 401
V+ AVV+R +K RR DG I F+ NA VI+NN E G+ I GPV +E
Sbjct: 53 VLKAVVVRTKKGVRRPDGSVIRFDGNACVILNNNSEQPIGTRIFGPVTRE 102
>UniRef50_A3U7M5 Cluster: 50S ribosomal protein L14; n=1;
Croceibacter atlanticus HTCC2559|Rep: 50S ribosomal
protein L14 - Croceibacter atlanticus HTCC2559
Length = 135
Score = 46.0 bits (104), Expect = 7e-04
Identities = 33/76 (43%), Positives = 37/76 (48%), Gaps = 3/76 (3%)
Frame = -2
Query: 409 SAHSLATGPVMAEPFISPLLLTMTPALSSKYINTPSRLLNGFRCLMTTAGIT---FFRSS 239
S SLATGP P ISP+ T ALSSK I PS L F TTA T
Sbjct: 27 SRSSLATGPKTRVPLISPVGFNNTHALSSKRIYEPSGLRTSFLVRTTTAVETAPFLIPPF 86
Query: 238 GLPFLTVATIMSPEPA 191
G+ T+ TI+SP A
Sbjct: 87 GVASFTLTTILSPTDA 102
>UniRef50_Q00UK0 Cluster: Ribosomal protein L23; n=1; Ostreococcus
tauri|Rep: Ribosomal protein L23 - Ostreococcus tauri
Length = 93
Score = 44.4 bits (100), Expect = 0.002
Identities = 18/22 (81%), Positives = 22/22 (100%)
Frame = +2
Query: 92 LGAVINCADNTGAKNLYVIAVQ 157
+GAV+NCADNTGAKNLY+IAV+
Sbjct: 62 VGAVVNCADNTGAKNLYMIAVK 83
>UniRef50_A6SDC7 Cluster: 50S ribosomal protein L14; n=7;
Pezizomycotina|Rep: 50S ribosomal protein L14 -
Botryotinia fuckeliana B05.10
Length = 134
Score = 43.2 bits (97), Expect = 0.005
Identities = 21/52 (40%), Positives = 30/52 (57%)
Frame = +3
Query: 246 RKKVMPAVVIRQRKPFRRRDGVFIYFEDNAGVIVNNKGEMKGSAITGPVAKE 401
R + AVV+R K +R DG + F+DNA V++N GE G+ + G V E
Sbjct: 66 RGDIRHAVVVRTVKKLQRPDGSVVKFDDNACVLINKAGEPIGTRLNGVVGTE 117
>UniRef50_UPI0000D9F818 Cluster: PREDICTED: similar to 60S ribosomal
protein L23; n=1; Macaca mulatta|Rep: PREDICTED: similar
to 60S ribosomal protein L23 - Macaca mulatta
Length = 98
Score = 42.3 bits (95), Expect = 0.008
Identities = 25/73 (34%), Positives = 36/73 (49%)
Frame = +2
Query: 95 GAVINCADNTGAKNLYVIAVQGYQRSPEQTAGGRFRGHDCGHSQKG*T*TPEKGNAGSGH 274
GAVIN AD+TGAK+LY+I+ +G + +K T +KG + SGH
Sbjct: 23 GAVINYADSTGAKSLYIISRKGINGRLNRLPAADVGYMVITTVKKRQTRAQKKGTSSSGH 82
Query: 275 QAAETVQKA*WSI 313
E + + W I
Sbjct: 83 LTTEVIPEKRWHI 95
Score = 41.1 bits (92), Expect = 0.019
Identities = 19/33 (57%), Positives = 23/33 (69%)
Frame = +3
Query: 156 KAIKGRLNRLPAAGSGDMIVATVKKGKPELRKK 254
K I GRLNRLPAA G M++ TVKK + +KK
Sbjct: 43 KGINGRLNRLPAADVGYMVITTVKKRQTRAQKK 75
Score = 36.7 bits (81), Expect = 0.40
Identities = 17/24 (70%), Positives = 19/24 (79%)
Frame = +1
Query: 28 MSKRGRGGSAGAKFRISLGLPAGS 99
M KR GGS+ KFRISLGLPAG+
Sbjct: 1 MLKRECGGSSSVKFRISLGLPAGA 24
>UniRef50_A0NWH4 Cluster: 50S ribosomal protein L14; n=2;
Bacteria|Rep: 50S ribosomal protein L14 - Stappia
aggregata IAM 12614
Length = 147
Score = 42.3 bits (95), Expect = 0.008
Identities = 31/70 (44%), Positives = 34/70 (48%), Gaps = 3/70 (4%)
Frame = -2
Query: 400 SLATGPVMAEPFISPLLLTMTPALSSKYINTPSRLLNGFRCLMTTAGIT---FFRSSGLP 230
S TGP + P S LLLT T AL S I PS F TTA IT R G+
Sbjct: 46 SRGTGPKIRVPIGSLLLLTSTAALRSNRITLPSGRRISFAVRTTTAFITSPFLTRPRGIA 105
Query: 229 FLTVATIMSP 200
LT T+MSP
Sbjct: 106 SLTETTMMSP 115
>UniRef50_Q3S293 Cluster: Ribosomal protein L14; n=1; Thalassiosira
pseudonana|Rep: Ribosomal protein L14 - Thalassiosira
pseudonana (Marine diatom)
Length = 126
Score = 42.3 bits (95), Expect = 0.008
Identities = 21/73 (28%), Positives = 42/73 (57%), Gaps = 7/73 (9%)
Frame = +3
Query: 201 GDMIVATVKKGKPELRK-------KVMPAVVIRQRKPFRRRDGVFIYFEDNAGVIVNNKG 359
GD+I+ +++K + + R +V AV+IR +K ++DG ++F+ N +++ +G
Sbjct: 36 GDIIIVSIQKLRNKARSTSKVQKGEVHKAVIIRTKKKTIKKDGTVVFFQSNVVSLISKQG 95
Query: 360 EMKGSAITGPVAK 398
+ S I GP+ K
Sbjct: 96 KPIASRIMGPIPK 108
>UniRef50_O21033 Cluster: Mitochondrial 60S ribosomal protein L14;
n=2; Dictyosteliida|Rep: Mitochondrial 60S ribosomal
protein L14 - Dictyostelium discoideum (Slime mold)
Length = 129
Score = 41.9 bits (94), Expect = 0.011
Identities = 25/76 (32%), Positives = 42/76 (55%), Gaps = 9/76 (11%)
Frame = +3
Query: 201 GDMIVATVKK------GKPELRKK---VMPAVVIRQRKPFRRRDGVFIYFEDNAGVIVNN 353
GD IV +KK GK +L+ K V AV+++ ++P RR+ G+ + +N +++
Sbjct: 37 GDKIVVVIKKMEKRKGGKYKLKVKKSDVCYAVIVKSKQPVRRKSGIIVNAGENGVILLTK 96
Query: 354 KGEMKGSAITGPVAKE 401
E G+ +TG V KE
Sbjct: 97 TKEPIGTRLTGVVFKE 112
>UniRef50_Q9G8W6 Cluster: Ribosomal protein L14; n=1; Rhodomonas
salina|Rep: Ribosomal protein L14 - Rhodomonas salina
(Cryptomonas salina)
Length = 113
Score = 39.1 bits (87), Expect = 0.075
Identities = 19/57 (33%), Positives = 32/57 (56%), Gaps = 1/57 (1%)
Frame = +3
Query: 225 KKGKPELRKKVMPAVVIRQRKPFR-RRDGVFIYFEDNAGVIVNNKGEMKGSAITGPV 392
KK K ++KK + I K F +++G+F+ F N V++N+K + G+ GPV
Sbjct: 37 KKSKTNIKKKSLFLAAIICEKIFNSKKNGIFVAFNKNNAVLLNSKNNLIGTRFFGPV 93
>UniRef50_P15767 Cluster: Mitochondrial 60S ribosomal protein L14;
n=1; Paramecium tetraurelia|Rep: Mitochondrial 60S
ribosomal protein L14 - Paramecium tetraurelia
Length = 119
Score = 37.1 bits (82), Expect = 0.30
Identities = 21/67 (31%), Positives = 32/67 (47%), Gaps = 3/67 (4%)
Frame = +3
Query: 201 GDMIVATVKKGKPEL---RKKVMPAVVIRQRKPFRRRDGVFIYFEDNAGVIVNNKGEMKG 371
GD I +++ KPE R K A+++R +RDG F F N V++ + G
Sbjct: 36 GDYIKVSIRSTKPECTIKRGKKKKAIIVRHAFGRLKRDGSFSKFSSNVCVLLKKRTAPLG 95
Query: 372 SAITGPV 392
I GP+
Sbjct: 96 REIKGPI 102
>UniRef50_Q9G8Z6 Cluster: Ribosomal protein L14; n=1; Ochromonas
danica|Rep: Ribosomal protein L14 - Ochromonas danica
Length = 127
Score = 36.3 bits (80), Expect = 0.53
Identities = 26/77 (33%), Positives = 47/77 (61%), Gaps = 7/77 (9%)
Frame = +3
Query: 192 AGSGDMIVATVK--KGKPELRKK---VMPAVVIRQRK-PFRRRD-GVFIYFEDNAGVIVN 350
A SGD+I+A++K K K ++ K V+ AVV++ + F R++ I F +N +I++
Sbjct: 33 AKSGDLIMASIKSIKYKQNIKLKKGDVVRAVVVKTKVFSFLRKEIKTPIKFFENGAIILS 92
Query: 351 NKGEMKGSAITGPVAKE 401
NK ++ G+ I G + K+
Sbjct: 93 NKNKLVGTRIFGGINKQ 109
>UniRef50_Q9TCB2 Cluster: Ribosomal protein L14; n=1; Nephroselmis
olivacea|Rep: Ribosomal protein L14 - Nephroselmis
olivacea
Length = 124
Score = 35.9 bits (79), Expect = 0.70
Identities = 20/67 (29%), Positives = 33/67 (49%), Gaps = 5/67 (7%)
Frame = +3
Query: 201 GDMIVATVKKGKPELRKK-----VMPAVVIRQRKPFRRRDGVFIYFEDNAGVIVNNKGEM 365
GD+IV T+KK + + K V V++ +K R+DG F+ N ++ +
Sbjct: 36 GDVIVVTIKKANSKYKGKATAGQVYRGVILETKKEVTRKDGSLFSFDRNVVALMTPQENP 95
Query: 366 KGSAITG 386
G+ ITG
Sbjct: 96 MGTRITG 102
>UniRef50_A4C2U8 Cluster: Putative uncharacterized protein; n=2;
Polaribacter|Rep: Putative uncharacterized protein -
Polaribacter irgensii 23-P
Length = 503
Score = 35.1 bits (77), Expect = 1.2
Identities = 23/75 (30%), Positives = 33/75 (44%), Gaps = 5/75 (6%)
Frame = +3
Query: 159 AIKGRLNRLPAAGSGDMIVATVKKGKPELRKKVMPAVV-----IRQRKPFRRRDGVFIYF 323
A+ R++ L G I K + K P V+ I K +G IYF
Sbjct: 154 AVSMRIDSLSLDGQATTIKGRFLKDSELIFTKEKPTVIYGYAAIPANKTLTITEGARIYF 213
Query: 324 EDNAGVIVNNKGEMK 368
DN+G+IV+ KG +K
Sbjct: 214 HDNSGLIVDKKGSLK 228
>UniRef50_Q9TAK1 Cluster: Ribosomal protein L14; n=1; Cafeteria
roenbergensis|Rep: Ribosomal protein L14 - Cafeteria
roenbergensis
Length = 124
Score = 35.1 bits (77), Expect = 1.2
Identities = 19/82 (23%), Positives = 45/82 (54%), Gaps = 2/82 (2%)
Frame = +3
Query: 162 IKGRLNRLPAAGSGDMI-VATVKKGKPELRK-KVMPAVVIRQRKPFRRRDGVFIYFEDNA 335
++G N+ GS ++ + ++ G ++ +V AV++R + + +DG F+ N
Sbjct: 25 LEGFFNKTAVVGSLIVLSIRGIRSGSRRVKAGQVSLAVIVRTKAWTKFKDGSQSRFQRNC 84
Query: 336 GVIVNNKGEMKGSAITGPVAKE 401
V++ K ++ G+ + GPV+++
Sbjct: 85 AVLLTRKKQILGTKVFGPVSRQ 106
>UniRef50_Q9LNP8 Cluster: F1L3.27; n=14; Magnoliophyta|Rep: F1L3.27
- Arabidopsis thaliana (Mouse-ear cress)
Length = 201
Score = 34.7 bits (76), Expect = 1.6
Identities = 28/72 (38%), Positives = 38/72 (52%), Gaps = 15/72 (20%)
Frame = +3
Query: 201 GDMIVATVKKGKPELRKKV----MP-----------AVVIRQRKPFRRRDGVFIYFEDNA 335
GD+IV +VK+ P ++KKV +P VV+R P R DG + F+DNA
Sbjct: 86 GDIIVGSVKEANPIVQKKVKKDAIPKGKVKKGMVVYGVVVRAAMPKGRADGSQVKFDDNA 145
Query: 336 GVIVNNKGEMKG 371
V+V K E KG
Sbjct: 146 IVVVGIK-EKKG 156
>UniRef50_Q9ZZN9 Cluster: 50S ribosomal protein L14; n=1;
Cyanidioschyzon merolae|Rep: 50S ribosomal protein L14 -
Cyanidioschyzon merolae (Red alga)
Length = 127
Score = 33.9 bits (74), Expect = 2.8
Identities = 19/72 (26%), Positives = 37/72 (51%), Gaps = 8/72 (11%)
Frame = +3
Query: 201 GDMIVATVK---KGKPELRKKVMP-----AVVIRQRKPFRRRDGVFIYFEDNAGVIVNNK 356
G I+ T+K + +R K+ A+++R +K R D ++ F DN V+++NK
Sbjct: 36 GSTIIVTIKELYRSNNSVRSKIEKGIISHALIVRTKKKNRSLDNIWTNFIDNGVVLLDNK 95
Query: 357 GEMKGSAITGPV 392
+ + + GP+
Sbjct: 96 KSLMFTRVRGPI 107
>UniRef50_UPI000023CF98 Cluster: predicted protein; n=1; Gibberella
zeae PH-1|Rep: predicted protein - Gibberella zeae PH-1
Length = 336
Score = 33.5 bits (73), Expect = 3.7
Identities = 25/64 (39%), Positives = 29/64 (45%)
Frame = +1
Query: 112 RRQHRGKESVCDRCPRLSKVA*TDCRRPVPGT*LWPQSKRVNLNSGKR*CRQWSSGSGNR 291
RR RG +V DR PR + DC RP P RV G+R CR S S R
Sbjct: 250 RRARRGNMNVMDRLPRPASEP-RDCERP-------PVHDRVAALRGERRCRPTSRSSIGR 301
Query: 292 SEGV 303
S+ V
Sbjct: 302 SQAV 305
>UniRef50_UPI000065FCAE Cluster: MAP/microtubule affinity-regulating
kinase 3 (EC 2.7.11.1) (Cdc25C- associated protein
kinase 1) (cTAK1) (C-TAK1) (Serine/threonine protein
kinase p78) (Ser/Thr protein kinase PAR-1) (Protein
kinase STK10).; n=1; Takifugu rubripes|Rep:
MAP/microtubule affinity-regulating kinase 3 (EC
2.7.11.1) (Cdc25C- associated protein kinase 1) (cTAK1)
(C-TAK1) (Serine/threonine protein kinase p78) (Ser/Thr
protein kinase PAR-1) (Protein kinase STK10). - Takifugu
rubripes
Length = 757
Score = 33.5 bits (73), Expect = 3.7
Identities = 24/84 (28%), Positives = 33/84 (39%)
Frame = -2
Query: 343 MTPALSSKYINTPSRLLNGFRCLMTTAGITFFRSSGLPFLTVATIMSPEPAAGSLFRRPL 164
M P L K + L F+C +A + F +L M + A + P
Sbjct: 96 MCPKLIFKLVFRRVPLAVHFKCFSHSASLCF-AGEVFDYLVAHGRMKEKEARAKFRQVPR 154
Query: 163 IALDSDHIQILCPCVVGAVDYCSQ 92
AL S + C C+V AV YC Q
Sbjct: 155 SALVSHLCPLACFCIVSAVQYCHQ 178
>UniRef50_Q6UVR4 Cluster: Ribosomal protein L14; n=1;
Pseudendoclonium akinetum|Rep: Ribosomal protein L14 -
Pseudendoclonium akinetum (Green alga)
Length = 129
Score = 33.5 bits (73), Expect = 3.7
Identities = 23/62 (37%), Positives = 32/62 (51%), Gaps = 10/62 (16%)
Frame = +3
Query: 201 GDMIVATVKKGKPE-----LRK-----KVMPAVVIRQRKPFRRRDGVFIYFEDNAGVIVN 350
GD + ATVKKG + L+K ++ VVI+ + RR DG I F N G+ VN
Sbjct: 37 GDFLKATVKKGSAKSQTQRLKKLTGSERLRNLVVIQTKSALRRLDGGAIRFNANCGITVN 96
Query: 351 NK 356
+
Sbjct: 97 ER 98
>UniRef50_A2BGS3 Cluster: Novel protein similar to vertebrate
transmembrane protein 116; n=3; Otophysi|Rep: Novel
protein similar to vertebrate transmembrane protein 116
- Danio rerio (Zebrafish) (Brachydanio rerio)
Length = 361
Score = 33.1 bits (72), Expect = 4.9
Identities = 19/69 (27%), Positives = 32/69 (46%)
Frame = -2
Query: 412 RSAHSLATGPVMAEPFISPLLLTMTPALSSKYINTPSRLLNGFRCLMTTAGITFFRSSGL 233
R+ + GPV++ + PLLLT ++ + +RCL+ G + SS
Sbjct: 140 RTRNCRCLGPVLS--CLLPLLLTAPVFVAGNVFQCYTNFTQPYRCLLMHTGAVYLTSSAS 197
Query: 232 PFLTVATIM 206
P LT +I+
Sbjct: 198 PELTACSII 206
>UniRef50_Q6LCP9 Cluster: Putative uncharacterized protein; n=2;
Caenorhabditis|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 413
Score = 33.1 bits (72), Expect = 4.9
Identities = 14/44 (31%), Positives = 26/44 (59%)
Frame = -3
Query: 156 WTAITYRFFAPVLSAQLITAPSWETQGDTEFRSRGTTTSSLRHF 25
++ T FF PVL+ + +T +W T ++ TTT++LR++
Sbjct: 353 YSTSTTPFFRPVLTTRPVTTTTWRTTRRITTTTKPTTTTTLRNY 396
>UniRef50_UPI00005882DA Cluster: PREDICTED: hypothetical protein;
n=1; Strongylocentrotus purpuratus|Rep: PREDICTED:
hypothetical protein - Strongylocentrotus purpuratus
Length = 365
Score = 32.3 bits (70), Expect = 8.6
Identities = 11/26 (42%), Positives = 19/26 (73%)
Frame = +1
Query: 466 ISSCVLLSFPSTSKSNPKNYNLRNXH 543
I+SC+ S+ +TS +NP++YN + H
Sbjct: 170 ITSCIYSSYDNTSSNNPRSYNTSSYH 195
>UniRef50_Q11M94 Cluster: Oligopeptide/dipeptide ABC transporter,
ATPase subunit; n=1; Mesorhizobium sp. BNC1|Rep:
Oligopeptide/dipeptide ABC transporter, ATPase subunit -
Mesorhizobium sp. (strain BNC1)
Length = 646
Score = 32.3 bits (70), Expect = 8.6
Identities = 16/53 (30%), Positives = 27/53 (50%)
Frame = -2
Query: 277 LMTTAGITFFRSSGLPFLTVATIMSPEPAAGSLFRRPLIALDSDHIQILCPCV 119
L TA SGL +L + ++ P+P+ G + R ++ D + I+ PCV
Sbjct: 210 LSLTAAAAIVTESGLSYLGLG-VVPPDPSWGQMIRGARAYMERDPLGIIIPCV 261
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 572,951,813
Number of Sequences: 1657284
Number of extensions: 12003292
Number of successful extensions: 33987
Number of sequences better than 10.0: 45
Number of HSP's better than 10.0 without gapping: 32899
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 33975
length of database: 575,637,011
effective HSP length: 96
effective length of database: 416,537,747
effective search space used: 40404161459
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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